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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP027065 Klebsiella pneumoniae strain WCHKP8F4 plasmid p1_095084, complete sequence 0 crisprs NA 0 0 0 0
CP027066 Klebsiella pneumoniae strain WCHKP8F4 plasmid p2_095084, complete sequence 0 crisprs NA 0 0 0 0
CP027067 Klebsiella pneumoniae strain WCHKP8F4 plasmid pKPC2_095084, complete sequence 0 crisprs RT 0 0 3 0
CP027068 Klebsiella pneumoniae strain WCHKP8F4 chromosome, complete genome 2 crisprs csa3,RT,cas3,DEDDh,DinG,WYL 0 0 12 0

Results visualization

1. CP027067
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1796 : 49847 56 Escherichia_phage(50.0%) transposase,protease NA
DBSCAN-SWA_2 65580 : 76739 11 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_3 99448 : 111590 16 Escherichia_phage(71.43%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP027068
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027068_1 1790531-1790683 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027068_2 4519085-4519179 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 449709 : 519087 75 uncultured_Caudovirales_phage(61.11%) portal,head,protease,capsid,integrase,tail,tRNA,terminase attL 467317:467334|attR 483312:483329
DBSCAN-SWA_2 1226391 : 1252446 39 Salmonella_phage(44.12%) transposase,integrase attL 1219879:1219892|attR 1236041:1236054
DBSCAN-SWA_3 1323796 : 1432994 114 Salmonella_phage(60.0%) portal,head,capsid,plate,holin,coat,tail,tRNA,terminase,transposase NA
DBSCAN-SWA_4 1763191 : 1770097 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_5 1810630 : 1826376 15 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_6 2806377 : 2817264 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_7 3010529 : 3085136 86 uncultured_Caudovirales_phage(32.69%) lysis,head,protease,plate,tail,transposase,terminase NA
DBSCAN-SWA_8 3118069 : 3172261 64 Enterobacteria_phage(33.33%) protease,transposase,holin,integrase attL 3117851:3117866|attR 3147619:3147634
DBSCAN-SWA_9 3277985 : 3367064 98 Klebsiella_phage(44.44%) portal,head,capsid,holin,integrase,tail,tRNA,terminase,transposase attL 3304788:3304802|attR 3364875:3364889
DBSCAN-SWA_10 3583043 : 3675994 97 Salmonella_phage(56.9%) portal,head,protease,capsid,plate,integrase,tail,tRNA attL 3638569:3638587|attR 3676069:3676087
DBSCAN-SWA_11 4255798 : 4267451 13 Enterobacteria_phage(70.0%) integrase attL 4256248:4256262|attR 4279304:4279318
DBSCAN-SWA_12 4735688 : 4745213 10 Enterobacteria_phage(83.33%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage