CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	0 crisprs	NA	0	1
CP034999	Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence	0 crisprs	NA	0	2
CP034998	Rhizobium acidisoli strain FH23 chromosome, complete genome	1 crisprs	cas3,csa3,WYL,DEDDh	1	4
CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	0 crisprs	DEDDh,csa3,RT,WYL	0	0
CP035000	Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence	0 crisprs	csa3	0	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

772041 : 787959

Bacillus_phage(40.0%)

integrase,transposase

attL 773610:773625|attR 779631:779646

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAS83197.1\|772041_772518_+\|transposase	transposase	NA	NA	NA	NA
QAS83198.1\|772514_772871_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
QAS83199.1\|772942_774445_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.0e-95	41.7
773610:773625	attL	NA	NA	NA	NA
QAS83200.1\|775724_776648_+\|integrase	integrase	NA	NA	NA	NA
QAS83201.1\|776644_777646_+\|integrase	integrase	S5M9V8	Brevibacillus_phage	5.4e-12	22.9
QAS83202.1\|778496_778796_-	hypothetical protein	K4HZX4	Acidithiobacillus_phage	2.0e-10	40.7
QAS83203.1\|779125_780649_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
779631:779646	attR	NA	NA	NA	NA
QAS83204.1\|780818_781055_+	DUF2934 domain-containing protein	NA	NA	NA	NA
QAS83205.1\|781550_781751_+	hypothetical protein	NA	NA	NA	NA
QAS83206.1\|781752_781959_+	hypothetical protein	NA	NA	NA	NA
QAS83207.1\|782196_782388_+	hypothetical protein	NA	NA	NA	NA
QAS83208.1\|783987_784317_+	DUF1236 domain-containing protein	NA	NA	NA	NA
QAS83209.1\|784367_785513_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
QAS83210.1\|786611_787127_+	helix-turn-helix domain-containing protein	A0A1B1P776	Bacillus_phage	5.4e-08	43.3
QAS83211.1\|787200_787959_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.3e-71	53.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP034999

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1004 : 79599

Stx2-converting_phage(28.57%)

integrase,transposase

attL 41520:41536|attR 67459:67475

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAS80808.1\|1004_2624_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	8.9e-73	36.6
QAS80809.1\|2578_3046_-\|transposase	transposase	NA	NA	NA	NA
QAS80810.1\|3042_3429_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
QAS80811.1\|14890_15253_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
QAS80812.1\|17157_18447_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
QAS80813.1\|21992_23345_-	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA
QAS80814.1\|23681_23813_+	hypothetical protein	NA	NA	NA	NA
QAS80815.1\|24068_24524_-	phasin	NA	NA	NA	NA
QAS81256.1\|25393_25711_-	ferredoxin III, nif-specific	NA	NA	NA	NA
QAS80816.1\|25710_25911_-	hypothetical protein	NA	NA	NA	NA
QAS80817.1\|25935_26424_-	NifX-associated nitrogen fixation protein	NA	NA	NA	NA
QAS80818.1\|26427_26760_-	nitrogenase	NA	NA	NA	NA
QAS81257.1\|26818_28360_-	nitrogenase molybdenum-iron protein subunit beta	NA	NA	NA	NA
QAS80819.1\|28482_29985_-	nitrogenase molybdenum-iron protein alpha chain	NA	NA	NA	NA
QAS80820.1\|30091_30985_-	nitrogenase iron protein	NA	NA	NA	NA
QAS80821.1\|32577_33165_-	NodA family N-acyltransferase	NA	NA	NA	NA
QAS80822.1\|33843_34788_+	LysR family transcriptional regulator	NA	NA	NA	NA
QAS80823.1\|35386_36295_-	LysR family transcriptional regulator	NA	NA	NA	NA
QAS80824.1\|36445_37471_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
QAS80825.1\|39404_39761_-	hypothetical protein	NA	NA	NA	NA
QAS80826.1\|40545_40677_+	hypothetical protein	NA	NA	NA	NA
QAS80827.1\|40846_42466_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	8.9e-73	36.6
41520:41536	attL	NA	NA	NA	NA
QAS80828.1\|42541_42886_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
QAS80829.1\|42882_43269_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
QAS80830.1\|43928_44822_-	hypothetical protein	A0A059NT77	Lactococcus_phage	9.6e-29	33.9
QAS80831.1\|44818_46333_-\|transposase	IS21 family transposase	NA	NA	NA	NA
QAS80832.1\|47021_47543_-	hypothetical protein	NA	NA	NA	NA
QAS80833.1\|47626_48322_-	hypothetical protein	NA	NA	NA	NA
QAS80834.1\|49576_49873_-	hypothetical protein	NA	NA	NA	NA
QAS80835.1\|51287_53105_-	hypothetical protein	NA	NA	NA	NA
QAS80836.1\|53104_54106_-	ATP-binding protein	NA	NA	NA	NA
QAS80837.1\|54102_56295_-\|integrase	integrase	NA	NA	NA	NA
QAS80838.1\|56368_56953_-	hypothetical protein	NA	NA	NA	NA
QAS80839.1\|57164_57254_-	hypothetical protein	NA	NA	NA	NA
QAS80840.1\|57696_59088_+	hypothetical protein	NA	NA	NA	NA
QAS80841.1\|59087_60956_+	CHAT domain-containing protein	NA	NA	NA	NA
QAS80842.1\|60983_63500_-	S8 family peptidase	NA	NA	NA	NA
QAS80843.1\|63557_64538_-	ATP-binding protein	M1PXF0	Moumouvirus	1.8e-12	25.4
QAS80844.1\|65359_65779_+	hypothetical protein	NA	NA	NA	NA
QAS80845.1\|65775_66294_+	hypothetical protein	NA	NA	NA	NA
QAS80846.1\|66705_67302_+	hypothetical protein	NA	NA	NA	NA
QAS80847.1\|67566_69267_+	AAA family ATPase	E5ESM9	Bathycoccus_sp._RCC1105_virus	2.2e-34	29.0
67459:67475	attR	NA	NA	NA	NA
QAS80848.1\|69346_70153_+	phosphohydrolase	K4K650	Caulobacter_phage	1.1e-34	33.9
QAS80849.1\|70193_70676_+	hypothetical protein	NA	NA	NA	NA
QAS80850.1\|71417_71642_+	hypothetical protein	NA	NA	NA	NA
QAS80851.1\|71703_72630_-	DUF4868 domain-containing protein	NA	NA	NA	NA
QAS80852.1\|72626_73232_-	hypothetical protein	NA	NA	NA	NA
QAS80853.1\|73355_73826_-	hypothetical protein	NA	NA	NA	NA
QAS81258.1\|74748_75834_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
QAS80854.1\|75861_78009_+	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	2.0e-40	26.9
QAS80855.1\|78762_79599_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

451963 : 505844

Bacillus_phage(100.0%)

plate,integrase,transposase

attL 441842:441856|attR 506917:506931

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
441842:441856	attL	NA	NA	NA	NA
QAS81128.1\|451963_453190_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
QAS81129.1\|453153_455040_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
QAS81130.1\|455039_455546_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
QAS81131.1\|455630_456164_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
QAS81132.1\|456279_457767_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
QAS81133.1\|457769_458324_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
QAS81134.1\|458357_459350_-	type VI secretion system protein TssA	NA	NA	NA	NA
QAS81294.1\|461037_463317_-	hypothetical protein	NA	NA	NA	NA
QAS81135.1\|466613_467969_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
QAS81295.1\|468030_469158_+	FHA domain-containing protein	NA	NA	NA	NA
QAS81136.1\|469157_470447_+	type VI secretion system protein TssL	NA	NA	NA	NA
QAS81137.1\|470456_474062_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
QAS81296.1\|474147_474336_+	hypothetical protein	NA	NA	NA	NA
QAS81138.1\|474358_475975_+	hypothetical protein	NA	NA	NA	NA
QAS81139.1\|477690_478701_+	LysR family transcriptional regulator	NA	NA	NA	NA
QAS81297.1\|478612_479446_-	radical SAM protein	NA	NA	NA	NA
QAS81140.1\|480667_481555_-	host specificity protein	NA	NA	NA	NA
QAS81141.1\|482967_485646_+	hypothetical protein	NA	NA	NA	NA
QAS81298.1\|486335_488684_+	hypothetical protein	NA	NA	NA	NA
QAS81142.1\|488773_489893_+\|transposase	IS3-like element ISRel21 family transposase	A0A1B1P773	Bacillus_phage	4.6e-12	29.0
QAS81143.1\|494298_496968_+	hypothetical protein	NA	NA	NA	NA
QAS81299.1\|496923_497112_-	hypothetical protein	NA	NA	NA	NA
QAS81144.1\|503471_503777_-	autotransporter	NA	NA	NA	NA
QAS81145.1\|503854_505492_-	MFS transporter	NA	NA	NA	NA
QAS81146.1\|505574_505844_-\|integrase	integrase catalytic subunit	NA	NA	NA	NA
506917:506931	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP034998

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CRISPR-Cas detection and classification

Crispr_ID: CP034998_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034998_1

571307-571389

Orphan

Consensus_repeat	Method
AGCGGTTCCGGGATAACGACATGCAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034998_1

>merge|CP034998|1|571307-571389|CRISPRCasFinder
AGCGGTTCCGGGATAACGACATGCATCAACTCCAACGCATGTCGCCCGGAAGTGCGTAGCGGTTCCGGGATAACGACATCCAT

>CP034998|1|1|571307-571389|CRISPRCasFinder
AGCGGTTCCGGGATAACGACATGCAT	CAACTCCAACGCATGTCGCCCGGAAGTGCGT
AGCGGTTCCGGGATAACGACATCCAT

Protein	Signature genes	Signature genes Name	Protein_function
CP034998.1\|QAS77104.1\|582326_582590_-\|DUF982-domain-containing-protein	unknown	unknown	gnl\|CDD\|368772
CP034998.1\|QAS77094.1\|570466_571279_+\|MipA/OmpV-family-protein	unknown	unknown	gnl\|CDD\|226236
CP034998.1\|QAS77095.1\|571443_572403_+\|4-hydroxybenzoate-octaprenyltransferase	unknown	unknown	gnl\|CDD\|183808
CP034998.1\|QAS77088.1\|560285_560747_+\|hypothetical-protein	unknown	unknown	unknown
CP034998.1\|QAS77086.1\|556908_558843_+\|DUF2207-domain-containing-protein	unknown	unknown	gnl\|CDD\|378333
CP034998.1\|QAS77102.1\|580409_581654_+\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	unknown	unknown	gnl\|CDD\|226985
CP034998.1\|QAS77085.1\|555600_556872_+\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|238797
CP034998.1\|QAS77097.1\|573348_576684_+\|DUF1217-domain-containing-protein	unknown	unknown	gnl\|CDD\|369062
CP034998.1\|QAS77093.1\|569712_570294_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
CP034998.1\|QAS77098.1\|576863_578300_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
CP034998.1\|QAS77091.1\|565974_568284_+\|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl\|CDD\|225094
CP034998.1\|QAS77096.1\|572484_573051_-\|hypothetical-protein	unknown	unknown	unknown
CP034998.1\|QAS77099.1\|578334_579309_-\|threonylcarbamoyl-AMP-synthase	unknown	unknown	gnl\|CDD\|223088
CP034998.1\|QAS77101.1\|580053_580311_+\|hypothetical-protein	unknown	unknown	unknown
CP034998.1\|QAS77100.1\|579397_580006_-\|hypothetical-protein	unknown	unknown	unknown
CP034998.1\|QAS77087.1\|558908_560192_+\|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl\|CDD\|234856
CP034998.1\|QAS77089.1\|561179_563000_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
CP034998.1\|QAS77090.1\|563364_565548_-\|glycine--tRNA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234925
CP034998.1\|QAS77092.1\|568417_569677_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225139
CP034998.1\|QAS77103.1\|581791_582262_+\|BA14K-family-protein	unknown	unknown	gnl\|CDD\|369573

Protein	Function_ID	Function_description	E-value
CP034998.1\|QAS77104.1\|582326_582590_-\|DUF982-domain-containing-protein	gnl\|CDD\|368772	pfam06169, DUF982, Protein of unknown function (DUF982). This family consists of several hypothetical proteins from Rhizobium meliloti, Rhizobium loti and Agrobacterium tumefaciens. The function of this family is unknown. Structural modelling suggests this domain may bind nucleic acids.	6.77359e-22
CP034998.1\|QAS77094.1\|570466_571279_+\|MipA/OmpV-family-protein	gnl\|CDD\|226236	COG3713, OmpV, Outer membrane protein V [Cell envelope biogenesis, outer membrane].	4.77534e-60
CP034998.1\|QAS77095.1\|571443_572403_+\|4-hydroxybenzoate-octaprenyltransferase	gnl\|CDD\|183808	PRK12878, ubiA, 4-hydroxybenzoate octaprenyltransferase.	0
CP034998.1\|QAS77086.1\|556908_558843_+\|DUF2207-domain-containing-protein	gnl\|CDD\|378333	pfam09972, DUF2207, Predicted membrane protein (DUF2207). This domain, found in various hypothetical bacterial proteins, has no known function.	6.44384e-71
CP034998.1\|QAS77102.1\|580409_581654_+\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	gnl\|CDD\|226985	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only].	1.29949e-114
CP034998.1\|QAS77085.1\|555600_556872_+\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|238797	cd01556, EPSP_synthase, EPSP synthase domain. 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EC 2.5.1.19) catalyses the reaction between shikimate-3-phosphate (S3P) and phosphoenolpyruvate (PEP) to form 5-enolpyruvylshkimate-3-phosphate (EPSP), an intermediate in the shikimate pathway leading to aromatic amino acid biosynthesis. The reaction is phosphoenolpyruvate + 3-phosphoshikimate = phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate. It is found in bacteria and plants but not animals. The enzyme is the target of the widely used herbicide glyphosate, which has been shown to occupy the active site. In bacteria and plants, it is a single domain protein, while in fungi, the domain is found as part of a multidomain protein with functions that are all part of the shikimate pathway.	1.26811e-141
CP034998.1\|QAS77090.1\|563364_565548_-\|glycine--tRNA-ligase-subunit-beta	gnl\|CDD\|234925	PRK01233, glyS, glycyl-tRNA synthetase subunit beta; Validated.	0
CP034998.1\|QAS77093.1\|569712_570294_+\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	9.18279e-56
CP034998.1\|QAS77098.1\|576863_578300_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	5.55511e-127
CP034998.1\|QAS77091.1\|565974_568284_+\|RNA-binding-transcriptional-accessory-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
CP034998.1\|QAS77099.1\|578334_579309_-\|threonylcarbamoyl-AMP-synthase	gnl\|CDD\|223088	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis].	7.27277e-79
CP034998.1\|QAS77087.1\|558908_560192_+\|phosphoribosylamine--glycine-ligase	gnl\|CDD\|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
CP034998.1\|QAS77089.1\|561179_563000_+\|HAMP-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	1.47093e-64
CP034998.1\|QAS77097.1\|573348_576684_+\|DUF1217-domain-containing-protein	gnl\|CDD\|369062	pfam06748, DUF1217, Protein of unknown function (DUF1217). This family represents a conserved region that is found within bacterial proteins, most of which are hypothetical. Some members contain multiple copies.	4.71503e-55
CP034998.1\|QAS77092.1\|568417_569677_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225139	COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane].	2.47882e-126
CP034998.1\|QAS77103.1\|581791_582262_+\|BA14K-family-protein	gnl\|CDD\|369573	pfam07886, BA14K, BA14K-like protein. The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus and by Brucella suis. BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process.	1.37349e-10

>CP034998.1|QAS77094.1|570466_571279_+|MipA/OmpV-family-protein
MSHRSVVSISLAIAFLSFGSAAAQESGQHFWSGDWYLNVGVAGFSAPKFEGSSHNEFKFSPLISVGRQGAGPRFSSRNDNPSFALIDKGAFRAGIVGKFVPSRDDGDGHELKGLRKVKWGAEAGGFVEVYPTNFLRARAEVRQGIRSHDGVVADLAIDAFTDIAPDLQLSGGPRATFATRGYYDAYYGVSAKHAAESGLDPYKPTAGMQSYGAGAALTWKATENLSASSFLEYKRLAGPAADSSLVRDRGSKNQVLIGVSATYKFNFSLQ
>CP034998.1|QAS77093.1|569712_570294_+|histidine-phosphatase-family-protein
MSSAFPEIYLVRHGETEWSLSGRHTGRSDIPLTGNGEAAASKLADRLSGLSCSAVWSSPSARARKTCALAGFGSGAVIRDDLAEWDYGAYEGVTTKAILAERPGWQLFRDGCPHGETAADVGARADAIIHALREAAAPILVFSSSHFLRVLAARWLGLPPEGGAHFVLDTASISVLGYEHDLTEPVIRRWNQR
>CP034998.1|QAS77092.1|568417_569677_+|class-I-SAM-dependent-methyltransferase
MASAFLSIVQQIIRKGSLKLTLANGDTYMIGDDTGDMVAARLADQEAEDAIRRDPTMKLGEMYMQGRFILEQGNIYDFLSLVKQNTTNEIFDFKMAALLVGRIAWQQLKSRVPVNRNKHNVAHHYDLSAKLFDLFLDEDWQYSCAYFEPPGIGLDEAQLAKKRHIAAKLLLEPNQRILEIGSGWGGMGMYLTEATEGAEFTGITLSEEQLKVSRSRAEKRGLAERVRFELQDYRTLTGRKFDRIVSVGMFEHVGIGNYPNFFRKVSDLLDDNGVMVLHSIGRPKPSFGTNAFIEKYIFPGGYIPSVGEVLPPLEKAGLLVRDVEILPLHYAYTLRHWRERFVARKAEAVALYDEQFFRMWEFYLAGSEMGFRWDELFILQIQIAKNQFTVPDNRNYIARNEARLKEFEARRAPLEKVTF
>CP034998.1|QAS77091.1|565974_568284_+|RNA-binding-transcriptional-accessory-protein
MAADLRFLAARISAEINARPDQAKAAIELLDEGATVPFIARYRKEVTGGLDDTQLRNLAERLVYLRELEARRAAIVESITGQGKMTDELMGKVGGAETKAELEDLYLPYKPKRRTRAEIARERGLGPLAEAILAERGREPAALAEGFVTADVPDVKTALEGARDIIAEGIAENADLLGRLRAHMRQASLLKAKVVDGKQATGEKFSDYFDHSERWATAPGHRALAMLRGWNEEVLTLTIEADAETASPNKPVERMIAVAYEIGASRPGDRWLMEVASWTWRVKLSMSLSLDLMRELRERAEEEAIHVFARNLKDLLLAAPAGSRATMGLDPGIRTGVKVAVVDGTGKVVATSTVYPFQPRNDVRGAQIELASLIRKHNVELISIGNGTGSRETEKLVADMLAELPAPKPTKVIVSEAGASVYSASATAAAEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQQKLSRSLDAVVEDAVNAVGVDLNTASAPLLSRVSGLGPSIADAIVRHRDSEGRFETRRDLLKVARLGGRTFEQCAGFLRIPNGKEPLDASSVHPEAYGVAKKIVAACGRDLRALMGDSAMLKSVDPRQFIDEKFGLPTVRDIISELEKPGRDPRPSFKTATFAEGVNEISDLKPGMMLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVVEVDAKRKRIALSMKRDDGSTAPPPRGDSRGNQGSRPQNERRPAAPKPESQGAFGAALAEAMKRK
>CP034998.1|QAS77090.1|563364_565548_-|glycine--tRNA-ligase-subunit-beta
MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLTARSADVREERKGPRTDANEMAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAAEEIVAEVMPGIIRDFPWPKSMRWGKASSKPGAMRWVRPLQSIVCTFGPEHEETVVIPFEIDGITASNITYGHRFHAPEAITVRRFDDYAANLEKAKVILDAERRKDIILHDARDIAFANGLELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRKQGEETLSNKFILVSNIQAHDGGKEIVHGNGKVVRARLSDALHFWKRDQGDLPDPETLTASAAKFGLDLKKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAEELARITGADAALTDRAAVLAKADLRTEAVGEFPELQGLMGRKYAGLQGENASVAAAIEDHYKPQGPSDRVPADKVAITVALADKLDTLIGFWAIGEKPTGSKDPFALRRAALGVVRILLERNVRLPLLTIMSRTLLLAKTGGDTVFAFAGDPAETFFDILSFFHDRLKVYLRDQGARHDLIDAVLTSDADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQLLAAEEKKGTVIADAVSPALLKLDAEKELFAAISGASKEAADAVASEDFRSAMAALSKLRGPVDRFFEDVLVNDEDAAIRANRLALLRLIREATGTVADFSKISG
>CP034998.1|QAS77089.1|561179_563000_+|HAMP-domain-containing-protein
MKNLKISKQLILLVVGLMIAFAVATSLQIRSSVDAIYKERYDMLRAEVQSAVSVLKLYQAKVTAGEMTLEEAQKQAYATVNAMKYDPDGYFFGYSYDIQMMFHFDASKIGQVNKGQPDSKGKLYREELVRLGQQGGGLVEYYSTAKPGQPAGDFRKTAYAQAFDPWKVVVVTGVYMEDLDAQINSTILTALSGSIILFFLAIAAAYLVIRGISGPLNNVHAALKAVAEEDVSIAIPHTGMNNEVGMMAKATQSLQEKIRERHAMSDREAAQQLALENERENNQRQQQDETALQARVVATIGQALEMIARGDLTVRCADLGQKYAALRDNFNDALSHLEAAMAKVSAKGTDIGTSKEEIRRASNELSQRTERQAASLEETSAALDELTVAVRQTADGAHEASKRVHSVSNEATHSDAIVGQAIEAMSGIEKSSSEITKIIGVIDEIAFQTNLLALNAGVEAARAGDSGKGFAVVAQEVRELAQRSAAAAKEIKDQIARSSSQVEHGVRLVGEAGEALKRISDQIKAANEIVAKIAHSASEQDTTLRSISSSMNQLDAATQQNAAMAEETTASAETLASDTDELINLIRGFRVGSAGLAPAMQGRRAA
>CP034998.1|QAS77088.1|560285_560747_+|hypothetical-protein
MRQIFLGAAVLLMAGSAMASSIEVIGKTAAPADGSIVTESCAACPPLQAELIKKDYTVPELKPGVLQASEVRDVGGEKKIYRTEGWMGGSPVVFVSKATPEAMIAAAPSAPSADGIDMSATTAAVIGGDAKPVVAGMAEQSAALNVSEFKLRF
>CP034998.1|QAS77087.1|558908_560192_+|phosphoribosylamine--glycine-ligase
MKVLLIGSGGREHALAWKLSQSPLMTEFYAAPGNPGIGEHAVLVPVNIEDHEAVAAFCKDKAIDFVVVGPEAPLVAGLADRLRADGLVVFGPSAAAAQLEGSKGFTKDICARYGIPTGAYQRFNNAPKAKAYIRDQGAPIVVKADGLAAGKGVTVAMTLDEALAAVDGCFEGAFGAAGAEVVVEAYLDGEEASFFCLCDGKNALPLATAQDHKRVGEGDTGVNTGGMGAYSPAPVMTAEMVERTMKEIIEPTMRGMAESGHPFSGVFFAGLMITSKGPELIEYNVRFGDPECQVMMMRLKSDLLPLLLATANGTLDQVSAEWSDDPALTVVMASKGYPAAYEKNTPILSLPEAGEGEKVFHAGTGLKDGALVATGGRVLNVTASGGTVAEAKDRAYALLDRVRWENGFSRRDIGWRAIERETGSDIV
>CP034998.1|QAS77086.1|556908_558843_+|DUF2207-domain-containing-protein
MERRFFGFCLALLLMLAAPAAFAAEVIDNFASAIQLERSGAMTVAETITVNAEGNRINHGIFRDFPLYFTDAEGRRRSVDFDMVSVTRDGEDEPWHTESISGGIRIYAGSADVSVTPGRHRYVFTYKTNRQIRYFDDHDELYWNVTGNGWIFPIRSATATVTLPPGVTATETTFFTGPQGATGKNARVSETGAGLVFATTAPLDANEGLTFAVRMPKGSIDPPSADMESTWWLKDNRNYFIGFGGLILVFAYYLRSWLKVGRDPARGVVVPRWDAPDGISPALVNYIDNKGFSGGGWTALASTALNLAVRGYVKLEDLKNSIVIRGTGKPLGKEKFQAGEAELLRVAGGAGATLTIDKANGERVKSVGQSFRSAIEKEHRGKYYNSNIGYTTGGIALSAAALVALFVFGSLQPDTIALMLVPTAISVFVAVFFAGFMRSMHRGNSLFGKIVAIIATAVGVFVGISILAVVVLALASSLVQLHETPMLFAVGGIVLLNILYFFIMGAPTPLGARMMDGIDGLRQYLTLAEKDRMNTAGAPEMSPQHFETLLPYAVALGVEKPWSRTFETWLAAAAAGAAAAYAPAWYSGNFNSGSFSDRVGGFSSSMASTIASTIPSPPPSSSSSGFSGGGSSGGGGGGGGGGGW
>CP034998.1|QAS77085.1|555600_556872_+|3-phosphoshikimate-1-carboxyvinyltransferase
MSKGKLTIIPPGKPLSGRAMPPGSKSITNRALLLAGLAKGTSRLTGALKSDDTKYMADALRAMGVQIDEPDDTTFVVTGSGKLLPPKVPLFLGNAGTATRFLTAAVASVEGTVVVDGDEHMRKRPIGPLVAALKSLGLDAEAPTGCPPVTVHGNGHFASGRVEIDAGLSSQYVSALLMAAPLAKQGANAPVTVALAGAEIGARGYVDLTLAAMETFGAEVKQLDAATWRVKPTGYTAADFVIEPDASAATYLWAAEVLTGGKIDLGVPNDAFTQPDAKAYETIAQFPHLPGEIDGSQMQDAIPTIAVLAAFNETPVRFVGIANLRVKECDRIRALSTGLNNIREGLAVEEGDDLIVHSDPDLAGQHLPAEIDSFADHRIAMSFALAGLKIDGITILDPDCVGKTFPAYWRTLAALGVTYQDKG
>CP034998.1|QAS77095.1|571443_572403_+|4-hydroxybenzoate-octaprenyltransferase
MQDTGDFNDRVSDAPSDNWVYRILPPWLWPYAQLARWDRPIGWQLLMWPCFWSATLAANAAIGEGLYSGSLLVSHLLLYFIGAVAMRGAGCTYNDLVDHEIDMEVARTRSRPLPSGRVTRAHAKIFIGLQALVGLFVLLQFNWFTVFLGVLSLGIVALYPYAKRFTDWPQFYLGLAFSWGALMGWAGILGGLSFAAVLLYAASVAWTIGYDTIYAHQDKEDDELIGVRSTARLFGDRTRVWLIGLYGLTLVLMFAAFALAGANLIAFLALFGAAGMFAWQIVRLDINDAAQCLALFKSNNRVGLIIFFGLFVSLLFAIP
>CP034998.1|QAS77096.1|572484_573051_-|hypothetical-protein
MNNPVMKPAWAGTTLRLDPSRFPQQVSYAIHDCSDDVNITIDERGAVLRKVLPSSGLPLSIALPKRVFQGVAARAIDHGDGEVTVTLELHHADPELCIPLLVAHDLSDIAADWRGWSEAFRIPMLMVEADGVARPLEDHIGGLRTSDLKPRRRHSYFANRRPRFLVRRTTGRLGVAMKIEGKEIIARN
>CP034998.1|QAS77097.1|573348_576684_+|DUF1217-domain-containing-protein
MITASLAYTILSKDMTSSLNKVASQATVKKDAEYYADHINKVTSVDDFLGDYKLYSYAMKAYGLEDMTYAKAFMKKVLESDLTDPNSYANKLSDTRYREFASAFNFNAPEKDVQTDAQEDDLIGLYKQSFIDADKATTAESTYYGNNIDSVTTVDDLVNNTRLRTYVLKTFNIDPTYASKDFLRQVLTSDLSDPTSVVNTQGGDKYKALAAQFSFNADGTVTGTAQTAAQKASVIETYTLNSQSVIIDNSVGSDVVYVNKTAADYNQAYYTAKIGTITNVDDLVADKRLTSYIKTAYSMGADFTAAALRTVLTDPGYAQLMGFTNVYNAFNFKSDGSTSSTARVRTLDQANKLSSAASQTANYYKVTSQSSSITNVDALLADGNMARYIKDAYGLGTGFSNADLKNILTDSAYAAAQGHADLNADFNFQADGSINGSVIQTDTQRKSTTDKSAANAAHFNAMIDSVTSVDDIMSDPVAVSYLRTSMQVADSVSDATLRTFLVDPAAASAQGYSDVHDLFNFKTDGSVATLYASQTAAQSASTSSKADNAAVYYQATIAGIANVDQLLSDQKLNNFVRNAFGIPSTVTDVALRGILTDQSGTGTYADVAAAFNFKADGSLKDGLAAQTDTQIRNTKFAAGARTDDYSARMATIANVDDLIADPAITNFLKSTYNLPLNISNADLKSYLTDATAASAAGYADLNADFNFAADGSLPVVSSVQTADQAQTTNDNYMARYDDEREEAIDEVASNYSSMMADSTSLLDTAEIKSVNDFMRTNATADFKKSNDNLPDPYHVALQAFGLTEQDVPRSMMRKILTSDAYDPNGYIASLKDERITNMARAFNFGPDGKAASPFQALPDATLAKYATDYKAHMTMLLKAGPVKDKASKDATTEVDYFAKGMAKVKSLDDFLDDSRLTDLVLKANNLDPKDYDKATLKKIFTSDPDDKKSYLNAKADARFQDIVAAFNFDKDGNLTRAKMGTIQNKAAEEHTQELYVQQTMEAQQGESNDGVRLALYFSRKAPSITSIYSILGDKALYQVVTTAYSLPSQMSGMDVTKQADLLNRFVKLEDLQDPKKVDKLLRRFTAMYDVQNSTQQSPALQILTGGGTQSS
>CP034998.1|QAS77098.1|576863_578300_-|FAD-binding-oxidoreductase
MSSTGISTELLDRFAAIVGDKYALRGEADLAPHLVENRGLYHGSSPLLLKPGSVEDVSAIMKLATETGTAIVPQTGNTGLVGGQTPRAGKSDIILSLERMNRIRDVDPVANVLVADGGAILADVQKAAEAHGQLFPLSLGSEGSCRIGGNLSTNAGGTAVLAYGNMRQLCLGLEVVLPTGEIWDGLRRLKKDNTGYDLRDLFIGAEGTLGIITGAVLKLFPQPLGHQVAFAGLNSVEDALGLFNLASSLCGTSLTGFELMPRFGVEITTRHIDGVRDPLQAAYPWYVLIDISTSDSAETAERMMNGVLEQGFAAGLVLDAAIASSVAQQQAIWHMRESMSDAQKPEGGSIKHDVSVPVSRIAHFMAEAAEAVLAAMPGARICAFGHMGDGNIHYNISQPVGADKAAFIGRWREMNHIVHGLVLAHGGSISAEHGIGQLKRDELAAIRPAIEIELMRRIKRAFDPANIMNPGKVVSLEI
>CP034998.1|QAS77099.1|578334_579309_-|threonylcarbamoyl-AMP-synthase
MARIIDIEADRRAALEAASAALADGFAIAIPTETVYGLAADATNPAAITRIYETKGRPRFNPLICHMADLAMAEEHAEFDPVSRALAAAFWPGPLTLVLPLKPQSPIHSLATAGLDSVGVRVPKGFAGALIGAFGRPLAAPSANTSGAISATSAAHVEADLGAKVPLILDAGPSTVGVESTIVKVEGDRVRLLRPGGLAAREIERVAGRPLLRAKTASAAIEAPGMLASHYAPGAAVRLNATAVEPGEALIAFGGAAVSGTNGARIVLDLSPRGDLAEAAANLFDYMKRADASGASSIAFSAIPEEGLGEAINDRLQRAAAPRD
>CP034998.1|QAS77100.1|579397_580006_-|hypothetical-protein
MAKLRYFDAKDASRSQEPQLVAAHSEFLRTGRIPRERRHWLAEEKRYFTHDEVAAKTGRKLQVAGEKTHQHINGFHHSIQFPKIIFHRTLEDSPHLGYCHVTAARTKFAHYEEVSWAFYIANFYSDIGENDNFFERIDVGYSRMYFAVAIKAGENSQDKMTIDRSVRGNGLLFRTHDPQAAIRNILLLGARNEQLREIIRQL
>CP034998.1|QAS77101.1|580053_580311_+|hypothetical-protein
MLKAVLKSPGSRPAKKQMPTDVANATDIYAGRLTSLRNGSLRHVAIDDNCCIVGRCDRPGRAACILSSISKPMSHYNRAAASPDD
>CP034998.1|QAS77102.1|580409_581654_+|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha
MDIRSNVLRQLKSRREGFSLERPFYIDEDYFQLDMEMIYYRDWLFIGHDCELPKAGAYFTVQIGSYPVVIVRGKDNVIRAFHNSCRHRGSRVCTKEHGSSVRLVCPYHQWTYDLEGKLAFARHMGDDFDKTGFNLKPVHCEVVAGYVFICLADTAPNFQPVRDKIEPYVAPHRISESKVAFQSTIIEKGNWKLVWENNRECYHCAANHPELCRTYPEAPSVTGTDGGADDPEIAGHWARCEAAGLPSKFQISPDGQFRTARMPLIEDAESYTMSGRPAVKRSLAEDISISHIGTMLLFHYPTTWNHLLGDHAISFRVLPLSANETAVTTKWLVHKDAVEGVDYNLEELTHVWTETNDQDRRIVEENAFGIHSPAYEPGPYSSLHEGGVMQFLEWYSNFMVNRLQGDQTKISAVA
>CP034998.1|QAS77103.1|581791_582262_+|BA14K-family-protein
MFGLSNKIATAVLAAAVVLTGFVPSQAIQMPTAPQVEKSSTVGNVQYRRYYRGDYYRPGYRPGAYYRPGYYGGYRGYSYYRPGYRRYNGYWYPLAAFGAGAVIGGAIVAQPRYVAPAPRMGSSHVAWCANRYRSYRAYDNTFQPYNGPRQQCYSPY
>CP034998.1|QAS77104.1|582326_582590_-|DUF982-domain-containing-protein
MKWCTSEEFTPLMLVVSGPEKYKLVASLVQAAEMLTVGWPIDDGDEYLIAIRACRAAIHGEISAQDARAALIRAADEAGISVITAVH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	423819-423849	6	0.806
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP053441	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence	451024-451054	6	0.806
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	132220-132250	6	0.806
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP050093	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence	168680-168710	7	0.774
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	939786-939816	7	0.774
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP050082	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence	667884-667914	7	0.774
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP049732	Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence	619458-619488	7	0.774
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP013634	Rhizobium sp. N324 plasmid pRspN324d, complete sequence	339708-339738	7	0.774
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	460625-460655	7	0.774
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP016289	Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence	460207-460237	7	0.774
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	488714-488744	7	0.774
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	460625-460655	7	0.774
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	444586-444616	7	0.774
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP053208	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence	570441-570471	7	0.774
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP013553	Rhizobium phaseoli strain N931 plasmid pRphaN931a, complete sequence	132400-132430	8	0.742
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP013586	Rhizobium phaseoli strain N161 plasmid pRphaN161a, complete sequence	137765-137795	8	0.742
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	114711-114741	8	0.742
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP013564	Rhizobium phaseoli strain N831 plasmid pRphaN831a, complete sequence	132400-132430	8	0.742
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP020951	Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence	353738-353768	8	0.742
CP034998_1	1.1\|571333\|31\|CP034998\|CRISPRCasFinder	571333-571363	31	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	78822-78852	8	0.742

1. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP050099 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence) position: , mismatch: 6, identity: 0.806

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
atcctctaacgcatgtcgcccggaagtgtgc	Protospacer
   ***.*********************.*.

2. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP053441 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence) position: , mismatch: 6, identity: 0.806

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
atcctctaacgcatgtcgcccggaagtgtgc	Protospacer
   ***.*********************.*.

3. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 6, identity: 0.806

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
ccataccaatgcatgtcgcccggaagtgtgc	Protospacer
* *. ****.******************.*.

4. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP050093 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence) position: , mismatch: 7, identity: 0.774

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
agtgcccaatgcatgtcgcccggaagtgcgc	Protospacer
 .  .****.********************.

5. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 7, identity: 0.774

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
gcggcccaatgcatgtcgcccgaaagtgcgt	Protospacer
  . .****.************.********

6. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 7, identity: 0.774

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
atcctctaatgcatgtcgcccggaagtgtgc	Protospacer
   ***.**.******************.*.

7. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP049732 (Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence) position: , mismatch: 7, identity: 0.774

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
atcctctaatgcatgtcgcccggaagtgtgc	Protospacer
   ***.**.******************.*.

8. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP013634 (Rhizobium sp. N324 plasmid pRspN324d, complete sequence) position: , mismatch: 7, identity: 0.774

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
cccgctcaatgcatgtcgcccggaagtgtgt	Protospacer
*   ..***.******************.**

9. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 7, identity: 0.774

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
atgctccgatgcatgtcgcccggaagtgtgc	Protospacer
  .****.*.******************.*.

10. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP016289 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.774

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
attctctaatgcatgtcgcccggaagtgtgc	Protospacer
   ***.**.******************.*.

11. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 7, identity: 0.774

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
atgctccgatgcatgtcgcccggaagtgtgc	Protospacer
  .****.*.******************.*.

12. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 7, identity: 0.774

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
atgctccgatgcatgtcgcccggaagtgtgc	Protospacer
  .****.*.******************.*.

13. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 7, identity: 0.774

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
atgctccgatgcatgtcgcccggaagtgtgc	Protospacer
  .****.*.******************.*.

14. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 7, identity: 0.774

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
atcctctaatgcatgtcgcccggaagtgtgc	Protospacer
   ***.**.******************.*.

15. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP013553 (Rhizobium phaseoli strain N931 plasmid pRphaN931a, complete sequence) position: , mismatch: 8, identity: 0.742

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
tcggaccaatgcatgtcgcccggaagtgtgc	Protospacer
. .  ****.******************.*.

16. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP013586 (Rhizobium phaseoli strain N161 plasmid pRphaN161a, complete sequence) position: , mismatch: 8, identity: 0.742

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
tcggaccaatgcatgtcgcccggaagtgtgc	Protospacer
. .  ****.******************.*.

17. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 8, identity: 0.742

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
cccgcttaatgcatgtcgcccggaagtgggt	Protospacer
*   ...**.****************** **

18. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP013564 (Rhizobium phaseoli strain N831 plasmid pRphaN831a, complete sequence) position: , mismatch: 8, identity: 0.742

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
tcggaccaatgcatgtcgcccggaagtgtgc	Protospacer
. .  ****.******************.*.

19. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP020951 (Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence) position: , mismatch: 8, identity: 0.742

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
cgcgcttaatgcatgtcgcccggaagtgtgt	Protospacer
*.  ...**.******************.**

20. spacer 1.1|571333|31|CP034998|CRISPRCasFinder matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 8, identity: 0.742

caactccaacgcatgtcgcccggaagtgcgt	CRISPR spacer
cccgcttaatgcatgtcgcccggaagtgggt	Protospacer
*   ...**.****************** **

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

778703 : 841740

Brucella_phage(12.5%)

terminase,transposase,protease,tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAS77271.1\|778703_779174_+\|terminase	terminase small subunit protein	F8TUR4	EBPR_podovirus	1.4e-31	57.7
QAS77272.1\|779139_780711_+\|terminase	terminase	A0A0H5ARR1	Pseudomonas_phage	2.8e-116	44.7
QAS77273.1\|780710_782801_+	hypothetical protein	X2CY04	Brucella_phage	1.5e-85	31.4
QAS77274.1\|782817_783129_+	hypothetical protein	NA	NA	NA	NA
QAS77275.1\|783221_784298_+	hypothetical protein	NA	NA	NA	NA
QAS77276.1\|784525_785266_-	HNH endonuclease	A0A1D8KU48	Synechococcus_phage	9.5e-06	49.0
QAS77277.1\|786363_787149_+	hypothetical protein	NA	NA	NA	NA
QAS77278.1\|787352_787916_+	hypothetical protein	NA	NA	NA	NA
QAS77279.1\|788108_788816_+	hypothetical protein	NA	NA	NA	NA
QAS77280.1\|788812_790636_+	hypothetical protein	A0A088F6U1	Sulfitobacter_phage	7.0e-42	28.1
QAS77281.1\|790632_791049_+	N-acetyltransferase	NA	NA	NA	NA
QAS77282.1\|791014_792022_+\|tail	tail fiber domain-containing protein	A0A1L7QQ51	Brucella_phage	1.7e-53	39.6
QAS77283.1\|792018_792336_+	hypothetical protein	NA	NA	NA	NA
QAS77284.1\|794625_795588_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
QAS77285.1\|795614_796622_-	fatty acid desaturase	NA	NA	NA	NA
QAS77286.1\|796763_797627_-	FkbM family methyltransferase	A0A2N9QVW1	Dishui_lake_phycodnavirus	2.5e-05	28.7
QAS77287.1\|797643_798393_-	FkbM family methyltransferase	A0A291AUV0	Sinorhizobium_phage	2.6e-11	30.2
QAS77288.1\|798395_799178_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
QAS77289.1\|799180_800512_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
QAS80672.1\|800515_801466_-	flippase-like domain-containing protein	NA	NA	NA	NA
QAS77290.1\|801858_803544_+	hypothetical protein	NA	NA	NA	NA
QAS77291.1\|803812_805168_+	hypothetical protein	L7TMF7	Rhizobium_phage	1.0e-69	55.1
QAS77292.1\|805281_805839_+	acyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	5.3e-09	53.6
QAS77293.1\|806140_806395_+	hypothetical protein	NA	NA	NA	NA
QAS77294.1\|806369_806834_+	lysozyme	A0A0K1LL70	Rhodobacter_phage	5.2e-26	44.7
QAS77295.1\|806833_807196_+	hypothetical protein	NA	NA	NA	NA
QAS77296.1\|807215_807428_+	hypothetical protein	NA	NA	NA	NA
QAS77297.1\|807424_809050_+	hypothetical protein	L7TKC4	Rhizobium_phage	1.1e-243	77.5
QAS77298.1\|809046_809475_+	DUF1515 domain-containing protein	NA	NA	NA	NA
QAS77299.1\|809566_810832_+	hypothetical protein	NA	NA	NA	NA
QAS77300.1\|810850_811036_+	hypothetical protein	NA	NA	NA	NA
QAS77301.1\|811267_811453_+	hypothetical protein	NA	NA	NA	NA
QAS77302.1\|811967_812168_-	hypothetical protein	NA	NA	NA	NA
QAS77303.1\|812421_812589_-	DUF3606 domain-containing protein	NA	NA	NA	NA
QAS77304.1\|812715_812952_-	hypothetical protein	NA	NA	NA	NA
QAS77305.1\|813361_813625_-	DUF1488 domain-containing protein	NA	NA	NA	NA
QAS77306.1\|813767_814070_-	hypothetical protein	NA	NA	NA	NA
QAS77307.1\|814243_814633_+	hypothetical protein	NA	NA	NA	NA
QAS77308.1\|814776_816282_-\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	1.6e-23	28.4
QAS77309.1\|816842_817880_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
QAS77310.1\|817993_818914_+	LysR family transcriptional regulator	NA	NA	NA	NA
QAS77311.1\|818976_819930_-	NmrA/HSCARG family protein	NA	NA	NA	NA
QAS77312.1\|820184_822476_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
QAS77313.1\|822582_823224_-	AhpC/TSA family protein	NA	NA	NA	NA
QAS77314.1\|823622_825119_-	sulfate adenylyltransferase subunit CysN	A0A1V0SGC3	Hokovirus	6.1e-28	28.3
QAS77315.1\|825120_826074_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA
QAS77316.1\|826187_826946_-	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA
QAS77317.1\|827365_827812_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
QAS77318.1\|827961_828369_+	transcriptional regulator	NA	NA	NA	NA
QAS77319.1\|828536_830186_-\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	6.3e-66	33.1
QAS77320.1\|830388_831852_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
QAS80673.1\|831848_832469_-	transcriptional regulator BetI	NA	NA	NA	NA
QAS77321.1\|832625_833174_+	HdeD family acid-resistance protein	NA	NA	NA	NA
QAS77322.1\|833337_833580_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
QAS77323.1\|833737_835570_+	EAL domain-containing protein	NA	NA	NA	NA
QAS77324.1\|835702_836701_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
QAS77325.1\|836687_838109_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	2.0e-12	27.3
QAS77326.1\|838211_838835_+	transcriptional regulator	NA	NA	NA	NA
QAS77327.1\|838863_840075_-	MFS transporter	NA	NA	NA	NA
QAS77328.1\|840594_841740_-\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1522526 : 1532040

uncultured_Mediterranean_phage(88.89%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAS77940.1\|1522526_1523384_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.5e-34	37.6
QAS77941.1\|1523380_1524097_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.7e-39	47.0
QAS77942.1\|1524278_1524470_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	8.9e-09	72.1
QAS77943.1\|1524521_1525148_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
QAS77944.1\|1525144_1525972_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.2e-52	46.1
QAS77945.1\|1526071_1527355_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.7e-98	45.3
QAS77946.1\|1527359_1528133_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.1e-23	30.2
QAS77947.1\|1528129_1528783_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.4e-16	35.3
QAS77948.1\|1528920_1530513_+	LysM peptidoglycan-binding domain-containing protein	I3PV24	Clostridium_phage	8.6e-12	29.2
QAS77949.1\|1530616_1531489_-	ATP-binding protein	NA	NA	NA	NA
QAS77950.1\|1531692_1532040_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	3.2e-12	38.0

DBSCAN-SWA_3

1751179 : 1761432

uncultured_Mediterranean_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAS78151.1\|1751179_1754101_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	62.1
QAS78152.1\|1754385_1754892_+	single-stranded DNA-binding protein	R9TP78	Rhizobium_phage	7.1e-45	57.1
QAS78153.1\|1754978_1755626_-	MarC family protein	NA	NA	NA	NA
QAS78154.1\|1755875_1758701_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	2.1e-98	33.4
QAS78155.1\|1759361_1759634_-	hypothetical protein	NA	NA	NA	NA
QAS78156.1\|1759739_1760234_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	1.0e-24	37.2
QAS78157.1\|1760321_1760894_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	3.7e-42	52.0
QAS78158.1\|1760922_1761432_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	3.2e-45	59.4

DBSCAN-SWA_4

3677428 : 3687529

Mycobacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAS79837.1\|3677428_3678139_+	7-cyano-7-deazaguanine synthase QueC	A0A2P1JXV3	Rhodococcus_phage	2.1e-50	49.1
QAS79838.1\|3678138_3678495_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
QAS79839.1\|3678491_3679220_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	1.8e-41	39.0
QAS79840.1\|3679235_3680459_-	adenylate/guanylate cyclase domain-containing protein	M1HLN3	Pelagibacter_phage	9.2e-14	29.4
QAS79841.1\|3680558_3681533_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	6.6e-140	75.4
QAS79842.1\|3681732_3683937_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	9.5e-211	51.5
QAS79843.1\|3683915_3684332_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	2.6e-16	42.5
QAS79844.1\|3684347_3684569_-	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	7.9e-17	53.4
QAS79845.1\|3685252_3687529_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	7.4e-126	41.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP035000

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

636657 : 678062

Leptospira_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAS81814.1\|636657_637846_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.6e-48	41.2
QAS81815.1\|638218_638941_+	LuxR family transcriptional regulator	NA	NA	NA	NA
QAS81816.1\|639569_642074_+	hypothetical protein	NA	NA	NA	NA
QAS81817.1\|642390_644010_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	8.9e-73	36.6
QAS81818.1\|644085_644430_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
QAS81819.1\|644426_644813_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
QAS81820.1\|645109_645628_-	hypothetical protein	NA	NA	NA	NA
QAS81821.1\|646304_647927_-	hypothetical protein	NA	NA	NA	NA
QAS81822.1\|647962_648757_-	AAA family ATPase	A0A059NT77	Lactococcus_phage	2.2e-32	35.3
QAS81823.1\|648746_650237_-\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	3.5e-23	28.7
QAS81824.1\|650361_651024_+	transcriptional regulator	NA	NA	NA	NA
QAS81825.1\|651148_651703_+	hypothetical protein	NA	NA	NA	NA
QAS81826.1\|651840_652308_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
QAS81827.1\|652541_653606_+	homoserine dehydrogenase	NA	NA	NA	NA
QAS81828.1\|653602_655012_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
QAS81908.1\|655150_655927_+	ABC transporter ATP-binding protein	A0A2H4UUX5	Bodo_saltans_virus	5.3e-07	24.9
QAS81829.1\|655956_656733_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
QAS81830.1\|656837_657560_+	ABC transporter permease	NA	NA	NA	NA
QAS81831.1\|657570_658260_+	ABC transporter permease	NA	NA	NA	NA
QAS81832.1\|658292_659195_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
QAS81833.1\|659279_660551_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
QAS81834.1\|660574_661984_+	aspartate ammonia-lyase	NA	NA	NA	NA
QAS81909.1\|661997_662792_+	kinase	NA	NA	NA	NA
QAS81835.1\|662788_663232_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
QAS81836.1\|663550_663880_+	hypothetical protein	NA	NA	NA	NA
QAS81837.1\|664183_665372_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.4e-53	43.9
QAS81838.1\|665423_666128_+	NmrA family transcriptional regulator	NA	NA	NA	NA
QAS81839.1\|666831_667524_-	FadR family transcriptional regulator	NA	NA	NA	NA
QAS81840.1\|667679_668660_-	arabinose ABC transporter substrate-binding protein	NA	NA	NA	NA
QAS81841.1\|668758_669997_+	class A beta-lactamase-related serine hydrolase	NA	NA	NA	NA
QAS81910.1\|670037_671594_+	sugar ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-09	24.1
QAS81842.1\|671590_672586_+	ABC transporter permease	NA	NA	NA	NA
QAS81843.1\|672819_673524_+\|transposase	IS6 family transposase	NA	NA	NA	NA
QAS81844.1\|673654_675409_-	hypothetical protein	NA	NA	NA	NA
QAS81845.1\|675405_676137_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
QAS81846.1\|676187_676685_-	SgcJ/EcaC family oxidoreductase	NA	NA	NA	NA
QAS81847.1\|676766_677141_-	hypothetical protein	NA	NA	NA	NA
QAS81848.1\|677357_678062_-\|transposase	IS6 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP035002

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP034999

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP034998

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. CP035000

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection