CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP028579	Klebsiella pneumoniae strain WCHKP36 plasmid p1_020036, complete sequence	0 crisprs	NA	0
CP028580	Klebsiella pneumoniae strain WCHKP36 plasmid p2_020036, complete sequence	0 crisprs	RT	0
CP028582	Klebsiella pneumoniae strain WCHKP36 plasmid pKPC2_020036, complete sequence	0 crisprs	RT	3
CP028583	Klebsiella pneumoniae strain WCHKP36 chromosome, complete genome	1 crisprs	csa3,RT,cas3,DEDDh,DinG,WYL	11
CP028581	Klebsiella pneumoniae strain WCHKP36 plasmid p3_020036, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1796 : 36848

Escherichia_phage(41.67%)

protease,integrase,transposase

attL 9236:9295|attR 36091:36912

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWA08960.1\|1796_2450_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AWA08961.1\|2669_3134_+	mRNA interferase PemK	NA	NA	NA	NA
AWA08962.1\|3130_3235_+	hypothetical protein	NA	NA	NA	NA
AWA08963.1\|4444_5149_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWA08964.1\|5659_6535_+	class A extended-spectrum beta-lactamase CTX-M-65	A0A1B0VBP7	Salmonella_phage	6.8e-152	98.9
AWA08965.1\|6614_7538_+\|transposase	IS5/IS1182 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
9236:9295	attL	NA	NA	NA	NA
AWA08966.1\|9288_9993_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWA08967.1\|10285_10600_-\|transposase	transposase	NA	NA	NA	NA
AWA08968.1\|10538_11552_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AWA09120.1\|11843_12398_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
AWA08969.1\|12494_12947_+	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA
AWA08970.1\|13079_13553_+	trimethoprim-resistant dihydrofolate reductase DfrA27	G3MBI7	Bacillus_virus	1.4e-15	29.1
AWA09121.1\|13733_14579_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA16	NA	NA	NA	NA
AWA08971.1\|14695_15043_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AWA08972.1\|15036_15876_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AWA08973.1\|15805_15985_-	hypothetical protein	NA	NA	NA	NA
AWA08974.1\|16003_16504_+	N-acetyltransferase	NA	NA	NA	NA
AWA08975.1\|16809_16923_-	NTP-binding protein	NA	NA	NA	NA
AWA08976.1\|17010_17775_+\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AWA08977.1\|17816_18029_+	resolvase	NA	NA	NA	NA
AWA08978.1\|18041_19250_+	restriction endonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
AWA08979.1\|19283_20717_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
AWA08980.1\|21098_21305_-	hypothetical protein	NA	NA	NA	NA
AWA09122.1\|21309_21951_-	restriction endonuclease	NA	NA	NA	NA
AWA08981.1\|22006_22318_-	hypothetical protein	NA	NA	NA	NA
AWA08982.1\|22353_22668_-	IncN plasmid KikA protein	NA	NA	NA	NA
AWA08983.1\|22664_23009_-	hypothetical protein	NA	NA	NA	NA
AWA09123.1\|23024_23375_-	KorB	NA	NA	NA	NA
AWA08984.1\|23438_24173_+	traL protein	NA	NA	NA	NA
AWA09124.1\|24181_24463_+	transcriptional regulator	NA	NA	NA	NA
AWA08985.1\|24472_24766_+	conjugal transfer protein TraM	NA	NA	NA	NA
AWA08986.1\|24815_25133_+	type IV secretion system protein VirB3	NA	NA	NA	NA
AWA08987.1\|25132_27733_+	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA
AWA08988.1\|27750_28464_+	type IV secretion system protein	NA	NA	NA	NA
AWA08989.1\|28471_28699_+	entry exclusion protein	NA	NA	NA	NA
AWA08990.1\|28714_29755_+	conjugal transfer protein TraD	NA	NA	NA	NA
AWA08991.1\|29837_29984_+	conjugal transfer protein TraN	NA	NA	NA	NA
AWA08992.1\|29973_30672_+	type IV secretion system protein VirB8	NA	NA	NA	NA
AWA08993.1\|30745_31567_+	conjugal transfer protein TraO	NA	NA	NA	NA
AWA08994.1\|31566_32727_+	conjugal transfer protein TraF	NA	NA	NA	NA
AWA08995.1\|32768_33764_+	conjugal transfer protein TraG	NA	NA	NA	NA
AWA08996.1\|33763_34297_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	5.8e-21	33.9
AWA08997.1\|36143_36848_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
36091:36912	attR	NA	NA	NA	NA

DBSCAN-SWA_2

43201 : 101017

Escherichia_phage(36.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWA09004.1\|43201_43462_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	4.1e-12	46.2
AWA09005.1\|43648_43840_-	hypothetical protein	NA	NA	NA	NA
AWA09006.1\|43882_44389_-	antirestriction protein	A0A1I9S7Y0	Rhodococcus_phage	4.8e-09	31.8
AWA09007.1\|44793_45573_-	hypothetical protein	NA	NA	NA	NA
AWA09008.1\|45626_46046_-	DUF1380 domain-containing protein	NA	NA	NA	NA
AWA09009.1\|46056_46278_-	hypothetical protein	NA	NA	NA	NA
AWA09010.1\|46277_46955_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.9
AWA09011.1\|47313_47985_+	DNA breaking-rejoining protein	A0A2H4J5W2	uncultured_Caudovirales_phage	5.1e-83	61.7
AWA09012.1\|48164_48587_+	peptidase	A0A1W6JNS2	Morganella_phage	3.1e-30	51.5
AWA09013.1\|48586_49858_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	6.1e-154	63.0
AWA09014.1\|49993_50965_-	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	1.4e-113	68.9
AWA09015.1\|50961_52167_-	ParA family protein	Q1MVJ3	Enterobacteria_phage	1.1e-205	89.2
AWA09016.1\|52529_53162_+	LacI family DNA-binding transcriptional regulator	A0A1V0E035	Clostridioides_phage	2.5e-07	31.9
AWA09017.1\|53215_53416_+	hypothetical protein	NA	NA	NA	NA
AWA09018.1\|53562_54513_+\|transposase	ISNCY family transposase	Q2A0A7	Sodalis_phage	6.6e-76	55.6
AWA09019.1\|54509_55121_-	DUF2913 domain-containing protein	NA	NA	NA	NA
AWA09125.1\|55117_55513_-	hypothetical protein	NA	NA	NA	NA
AWA09020.1\|56026_57007_+\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AWA09126.1\|57658_58216_+	hypothetical protein	NA	NA	NA	NA
AWA09021.1\|58684_59389_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWA09022.1\|59521_60163_-	type A-2 chloramphenicol O-acetyltransferase CatII	G3CFL0	Escherichia_phage	7.3e-55	45.9
AWA09023.1\|60312_60813_-	hypothetical protein	NA	NA	NA	NA
AWA09024.1\|60892_61597_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWA09025.1\|61630_62122_-	hypothetical protein	NA	NA	NA	NA
AWA09026.1\|62228_62966_+	resolvase	NA	NA	NA	NA
AWA09027.1\|62962_63187_+	hypothetical protein	NA	NA	NA	NA
AWA09028.1\|63308_63485_+	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
AWA09029.1\|63666_64671_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AWA09030.1\|64749_65184_-	mercuric resistance operon regulatory protein	NA	NA	NA	NA
AWA09031.1\|65255_65606_+	mercuric transporter	NA	NA	NA	NA
AWA09032.1\|65619_65895_+	mercuric transporter periplasmic component	NA	NA	NA	NA
AWA09127.1\|65930_66353_+	mercury transport protein MerC	NA	NA	NA	NA
AWA09033.1\|66404_68099_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
AWA09034.1\|68116_68479_+	transcriptional regulator	NA	NA	NA	NA
AWA09035.1\|68475_68712_+	mercury resistance protein	NA	NA	NA	NA
AWA09036.1\|68708_69416_+	EAL domain-containing protein	NA	NA	NA	NA
AWA09037.1\|70727_71432_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWA09038.1\|71471_71945_+	recombinase	Q1MVP4	Enterobacteria_phage	3.3e-76	99.3
AWA09039.1\|73007_74075_-\|transposase	IS481-like element ISKpn28 family transposase	NA	NA	NA	NA
AWA09040.1\|74146_74305_+	Hok/Gef family protein	NA	NA	NA	NA
AWA09041.1\|74997_75270_+	hypothetical protein	NA	NA	NA	NA
AWA09042.1\|75266_75617_+	hypothetical protein	NA	NA	NA	NA
AWA09043.1\|75631_75949_+	hypothetical protein	NA	NA	NA	NA
AWA09044.1\|76789_77146_+	hypothetical protein	A0A248SL90	Klebsiella_phage	7.5e-25	58.1
AWA09045.1\|77206_77419_+	hypothetical protein	NA	NA	NA	NA
AWA09046.1\|77429_77654_+	hypothetical protein	NA	NA	NA	NA
AWA09047.1\|77734_78055_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	1.5e-08	39.5
AWA09048.1\|78044_78323_+	XRE family transcriptional regulator	O64356	Escherichia_phage	2.5e-07	39.4
AWA09128.1\|78768_79029_-	hypothetical protein	NA	NA	NA	NA
AWA09049.1\|78943_79162_-	hypothetical protein	NA	NA	NA	NA
AWA09050.1\|79259_80081_+	DUF945 domain-containing protein	K4F5L3	Cronobacter_phage	1.2e-44	40.1
AWA09051.1\|80113_80443_+	hypothetical protein	NA	NA	NA	NA
AWA09052.1\|80475_80961_-	lytic transglycosylase	NA	NA	NA	NA
AWA09053.1\|81384_81768_+	conjugal transfer protein TraM	NA	NA	NA	NA
AWA09129.1\|82027_82705_+	conjugal transfer protein TrbJ	NA	NA	NA	NA
AWA09054.1\|82855_83026_+	conjugal transfer protein TraY	NA	NA	NA	NA
AWA09055.1\|83087_83456_+	type IV conjugative transfer system pilin TraA	NA	NA	NA	NA
AWA09056.1\|83469_83775_+	type IV conjugative transfer system protein TraL	NA	NA	NA	NA
AWA09057.1\|84214_84919_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWA09058.1\|86029_86734_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWA09059.1\|87810_90627_+	conjugal transfer protein TraG	NA	NA	NA	NA
AWA09060.1\|90659_91181_+	protein traS	NA	NA	NA	NA
AWA09061.1\|91202_91937_+	complement resistance protein TraT	NA	NA	NA	NA
AWA09062.1\|92073_92877_+	hypothetical protein	NA	NA	NA	NA
AWA09063.1\|92927_95144_+	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA
AWA09064.1\|95143_100279_+	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA
AWA09065.1\|100312_101017_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_3

117933 : 129092

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWA09088.1\|117933_118635_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-26	36.2
AWA09089.1\|119071_119302_-	hypothetical protein	NA	NA	NA	NA
AWA09090.1\|119364_120036_-	Mediator of plasmid stability	NA	NA	NA	NA
AWA09091.1\|120038_121010_-	StbA family protein	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
AWA09092.1\|121258_122743_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AWA09093.1\|122742_122994_-	hypothetical protein	NA	NA	NA	NA
AWA09094.1\|123152_123584_+	peptidase	A0A1W6JNS2	Morganella_phage	2.1e-29	53.3
AWA09095.1\|123583_124855_+	DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	7.5e-152	63.7
AWA09096.1\|124936_125914_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	1.4e-86	53.8
AWA09097.1\|125910_127116_-	ParA family protein	A0A077SL49	Escherichia_phage	5.3e-163	69.3
AWA09098.1\|128225_129092_-	RepB family plasmid replication initiator protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP028583

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CRISPR-Cas detection and classification

Crispr_ID: CP028583_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028583_1

4596388-4596482

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP028583_1

>merge|CP028583|1|4596388-4596482|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>CP028583|1|1|4596388-4596482|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
CP028583.1\|AWA13387.1\|4590562_4593469_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP028583.1\|AWA13398.1\|4605545_4605923_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP028583.1\|AWA13386.1\|4588017_4590375_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP028583.1\|AWA14351.1\|4594717_4594906_+\|hypothetical-protein	unknown	unknown	unknown
CP028583.1\|AWA13390.1\|4594934_4596299_-\|malate-permease	unknown	unknown	gnl\|CDD\|377030
CP028583.1\|AWA13394.1\|4600040_4602389_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP028583.1\|AWA13384.1\|4585506_4587009_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP028583.1\|AWA13388.1\|4593481_4594141_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP028583.1\|AWA13392.1\|4598238_4598937_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
CP028583.1\|AWA13396.1\|4603735_4604725_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
CP028583.1\|AWA13391.1\|4596623_4598249_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
CP028583.1\|AWA13395.1\|4602443_4603730_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP028583.1\|AWA13385.1\|4587146_4587842_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP028583.1\|AWA13393.1\|4598969_4599797_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP028583.1\|AWA13389.1\|4594215_4594755_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
CP028583.1\|AWA13397.1\|4604721_4605543_+\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
CP028583.1\|AWA13400.1\|4606728_4606932_-\|hypothetical-protein	unknown	unknown	unknown
CP028583.1\|AWA13382.1\|4582603_4583449_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
CP028583.1\|AWA13399.1\|4605927_4606776_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
CP028583.1\|AWA13383.1\|4583786_4585496_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221

Protein	Function_ID	Function_description	E-value
CP028583.1\|AWA13387.1\|4590562_4593469_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP028583.1\|AWA13398.1\|4605545_4605923_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
CP028583.1\|AWA13386.1\|4588017_4590375_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP028583.1\|AWA13395.1\|4602443_4603730_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP028583.1\|AWA13390.1\|4594934_4596299_-\|malate-permease	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
CP028583.1\|AWA13394.1\|4600040_4602389_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP028583.1\|AWA13384.1\|4585506_4587009_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP028583.1\|AWA13388.1\|4593481_4594141_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
CP028583.1\|AWA13392.1\|4598238_4598937_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
CP028583.1\|AWA13396.1\|4603735_4604725_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP028583.1\|AWA13391.1\|4596623_4598249_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
CP028583.1\|AWA13385.1\|4587146_4587842_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
CP028583.1\|AWA13393.1\|4598969_4599797_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
CP028583.1\|AWA13389.1\|4594215_4594755_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
CP028583.1\|AWA13397.1\|4604721_4605543_+\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
CP028583.1\|AWA13382.1\|4582603_4583449_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
CP028583.1\|AWA13399.1\|4605927_4606776_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP028583.1\|AWA13383.1\|4583786_4585496_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0

>CP028583.1|AWA13390.1|4594934_4596299_-|malate-permease
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>CP028583.1|AWA14351.1|4594717_4594906_+|hypothetical-protein
MLTPAWAGVSTDINSSPTYDKYDSAWTVMMMVAIADRALIVTLNAEHLGYRTQIFSAFCSGK
>CP028583.1|AWA13389.1|4594215_4594755_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>CP028583.1|AWA13388.1|4593481_4594141_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>CP028583.1|AWA13387.1|4590562_4593469_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>CP028583.1|AWA13386.1|4588017_4590375_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>CP028583.1|AWA13385.1|4587146_4587842_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>CP028583.1|AWA13384.1|4585506_4587009_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>CP028583.1|AWA13383.1|4583786_4585496_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>CP028583.1|AWA13382.1|4582603_4583449_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>CP028583.1|AWA13391.1|4596623_4598249_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>CP028583.1|AWA13392.1|4598238_4598937_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>CP028583.1|AWA13393.1|4598969_4599797_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>CP028583.1|AWA13394.1|4600040_4602389_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>CP028583.1|AWA13395.1|4602443_4603730_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>CP028583.1|AWA13396.1|4603735_4604725_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>CP028583.1|AWA13397.1|4604721_4605543_+|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>CP028583.1|AWA13398.1|4605545_4605923_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>CP028583.1|AWA13399.1|4605927_4606776_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>CP028583.1|AWA13400.1|4606728_4606932_-|hypothetical-protein
MFPVAGFVFFLKRSPGRQIAHKRRSGKALAATRQNDAAGSPDKAQRAAIREESGRDGFAFVEAFLPV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

451531 : 520909

uncultured_Caudovirales_phage(61.11%)

head,tail,portal,integrase,protease,terminase,capsid,tRNA

attL 469139:469156|attR 485134:485151

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWA09555.1\|451531_452479_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-07	37.2
AWA09556.1\|452493_453003_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
AWA09557.1\|453131_454256_+	DNA-protecting protein DprA	NA	NA	NA	NA
AWA09558.1\|454227_454701_+	DUF494 domain-containing protein	NA	NA	NA	NA
AWA09559.1\|454726_455269_+	hypothetical protein	NA	NA	NA	NA
AWA09560.1\|455273_455846_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
AWA09561.1\|455849_456668_+	shikimate dehydrogenase	NA	NA	NA	NA
AWA09562.1\|456664_456922_+	DUF1488 domain-containing protein	NA	NA	NA	NA
AWA14170.1\|456897_457452_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
AWA09563.1\|463247_463469_-	hypothetical protein	NA	NA	NA	NA
AWA09564.1\|463762_466873_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AWA09565.1\|466885_468025_-	MexX family efflux pump subunit	NA	NA	NA	NA
AWA09566.1\|468403_469054_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
469139:469156	attL	NA	NA	NA	NA
AWA09567.1\|469329_470556_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.8e-150	62.2
AWA09568.1\|470648_471590_+	hypothetical protein	NA	NA	NA	NA
AWA09569.1\|471771_472056_+	transcriptional regulator	NA	NA	NA	NA
AWA09570.1\|472066_472846_+	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5
AWA09571.1\|472969_473164_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
AWA14171.1\|473297_473567_+	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
AWA09572.1\|473559_473748_+	hypothetical protein	NA	NA	NA	NA
AWA09573.1\|473740_474055_+	hypothetical protein	NA	NA	NA	NA
AWA09574.1\|474051_474420_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
AWA09575.1\|474416_474782_+	hypothetical protein	NA	NA	NA	NA
AWA09576.1\|474781_476917_+	DNA primase	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
AWA09577.1\|477259_477595_+	hypothetical protein	NA	NA	NA	NA
AWA09578.1\|477643_478156_-	hypothetical protein	NA	NA	NA	NA
AWA09579.1\|478419_479586_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
AWA09580.1\|479637_480198_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
AWA09581.1\|480199_481441_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
AWA09582.1\|481437_481773_+\|head,tail	head-tail adaptor	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
AWA09583.1\|481769_482069_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
AWA09584.1\|482068_482512_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
AWA09585.1\|482638_482830_+\|terminase	terminase	NA	NA	NA	NA
AWA09586.1\|482787_483144_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
AWA09587.1\|483127_484789_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
AWA09588.1\|484791_484983_+	hypothetical protein	NA	NA	NA	NA
AWA09589.1\|485136_485433_-	Fis family transcriptional regulator	NA	NA	NA	NA
485134:485151	attR	NA	NA	NA	NA
AWA09590.1\|485457_486423_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AWA09591.1\|486580_486775_-	hypothetical protein	NA	NA	NA	NA
AWA09592.1\|486780_487662_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AWA09593.1\|487673_489125_-	sodium/panthothenate symporter	NA	NA	NA	NA
AWA09594.1\|489114_489357_-	hypothetical protein	NA	NA	NA	NA
AWA09595.1\|489467_490817_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AWA09596.1\|490827_491295_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AWA09597.1\|491317_491770_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
AWA09598.1\|491993_492602_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
AWA09599.1\|492601_493603_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
AWA09600.1\|493831_494023_+	hypothetical protein	NA	NA	NA	NA
AWA09601.1\|494102_496043_+	RNase E specificity factor CsrD	NA	NA	NA	NA
AWA09602.1\|496164_496371_-	hypothetical protein	NA	NA	NA	NA
AWA09603.1\|496348_497392_+	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
AWA09604.1\|497462_498455_+	rod shape-determining protein MreC	NA	NA	NA	NA
AWA09605.1\|498454_498943_+	rod shape-determining protein MreD	NA	NA	NA	NA
AWA09606.1\|498950_499532_+	septum formation inhibitor Maf	NA	NA	NA	NA
AWA09607.1\|499534_501004_+	ribonuclease G	NA	NA	NA	NA
AWA09608.1\|501041_504839_+	AsmA2 domain-containing protein	NA	NA	NA	NA
AWA09609.1\|504927_506373_+\|protease	metalloprotease TldD	NA	NA	NA	NA
AWA09610.1\|506408_507338_-	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
AWA09611.1\|507469_507673_+	protein AaeX	NA	NA	NA	NA
AWA09612.1\|507680_508613_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
AWA09613.1\|508618_510586_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
AWA09614.1\|510665_510941_+	hypothetical protein	NA	NA	NA	NA
AWA09615.1\|510991_511258_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AWA09616.1\|511356_511620_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AWA09617.1\|511995_512466_-	arginine repressor	NA	NA	NA	NA
AWA09618.1\|512880_513819_+	malate dehydrogenase	NA	NA	NA	NA
AWA09619.1\|513955_515014_-\|protease	serine endoprotease DegS	NA	NA	NA	NA
AWA09620.1\|515101_516469_-\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
AWA09621.1\|516642_517041_-	DUF1043 domain-containing protein	NA	NA	NA	NA
AWA09622.1\|517231_518359_+	cell division protein ZapE	NA	NA	NA	NA
AWA09623.1\|518624_519053_+	50S ribosomal protein L13	NA	NA	NA	NA
AWA09624.1\|519068_519461_+	30S ribosomal protein S9	NA	NA	NA	NA
AWA09625.1\|519570_519774_-	hypothetical protein	NA	NA	NA	NA
AWA09626.1\|519772_520411_+	stringent starvation protein A	NA	NA	NA	NA
AWA09627.1\|520414_520909_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8

DBSCAN-SWA_2

1238371 : 1264426

Salmonella_phage(44.12%)

transposase,integrase

attL 1229467:1229481|attR 1266961:1266975

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1229467:1229481	attL	NA	NA	NA	NA
AWA10320.1\|1238371_1239352_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AWA10321.1\|1239397_1240396_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	2.2e-183	94.5
AWA10322.1\|1240398_1241028_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
AWA10323.1\|1241150_1241393_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
AWA10324.1\|1241425_1241935_+	hypothetical protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
AWA10325.1\|1241942_1242143_+	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
AWA10326.1\|1242106_1242445_+	hypothetical protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
AWA10327.1\|1242512_1242746_+	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
AWA10328.1\|1242745_1242973_+	hypothetical protein	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
AWA10329.1\|1242969_1243821_+	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
AWA10330.1\|1243817_1246202_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
AWA10331.1\|1246431_1246683_+	hypothetical protein	NA	NA	NA	NA
AWA10332.1\|1246682_1248167_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AWA10333.1\|1248263_1248602_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.8e-44	80.0
AWA14198.1\|1248594_1248798_-	hypothetical protein	NA	NA	NA	NA
AWA10334.1\|1248797_1249418_-	hypothetical protein	Q1MVF7	Enterobacteria_phage	1.0e-29	40.7
AWA10335.1\|1249414_1249708_-	hypothetical protein	Q6UAT9	Klebsiella_phage	2.7e-44	86.6
AWA14199.1\|1249707_1250175_-	hypothetical protein	A0A2R2Z312	Escherichia_phage	1.3e-37	51.7
AWA10336.1\|1250468_1251113_-	hypothetical protein	Q1MVG0	Enterobacteria_phage	8.0e-110	79.3
AWA10337.1\|1251109_1251301_-	hypothetical protein	NA	NA	NA	NA
AWA10338.1\|1251284_1251695_-	hypothetical protein	A0A2P1MXC5	Escherichia_phage	4.3e-16	45.1
AWA10339.1\|1251887_1252235_-	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	6.5e-50	82.6
AWA10340.1\|1252354_1253140_-	replication protein	A0A193GYX1	Enterobacter_phage	3.7e-133	87.7
AWA10341.1\|1253136_1253904_-	primosomal protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
AWA10342.1\|1253903_1254113_-	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
AWA10343.1\|1254259_1254493_-	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
AWA10344.1\|1254647_1255229_+	XRE family transcriptional regulator	Q858D7	Salmonella_phage	7.1e-65	64.3
AWA10345.1\|1255595_1255895_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
AWA10346.1\|1255891_1256713_+	exodeoxyribonuclease VIII	A0A193GYK2	Enterobacter_phage	1.8e-130	80.2
AWA10347.1\|1256709_1257591_+	recombinase RecT	T1SBJ5	Salmonella_phage	8.9e-136	84.3
AWA10348.1\|1257639_1257888_+	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	4.9e-31	76.8
AWA10349.1\|1257997_1258291_+	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	4.0e-32	71.1
AWA10350.1\|1258283_1258442_+	DUF1317 domain-containing protein	T1SAR0	Salmonella_phage	1.1e-17	78.8
AWA10351.1\|1258438_1259101_+	hypothetical protein	A0A059VF56	Pseudomonas_phage	1.2e-47	46.6
AWA10352.1\|1259097_1259691_+	adenine methylase	T1SA14	Salmonella_phage	6.3e-109	91.9
AWA10353.1\|1259687_1259930_+	hypothetical protein	NA	NA	NA	NA
AWA10354.1\|1259872_1261123_-	DUF4102 domain-containing protein	A0A1X9TCT6	Enterobacter_phage	5.8e-205	84.4
AWA10355.1\|1261314_1262892_-	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA
AWA10356.1\|1262959_1264426_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7
1266961:1266975	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1335776 : 1444974

114

Salmonella_phage(60.0%)

coat,lysis,tail,head,transposase,plate,portal,holin,terminase,capsid,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWA10419.1\|1335776_1336514_-\|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	NA	NA	NA	NA
AWA10420.1\|1336645_1337977_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
AWA10421.1\|1338022_1338406_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
AWA10422.1\|1338719_1339409_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.3e-57	53.0
AWA10423.1\|1339466_1340552_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
AWA10424.1\|1340755_1341181_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
AWA10425.1\|1341250_1341949_+	DTW domain-containing protein	NA	NA	NA	NA
AWA10426.1\|1341983_1344635_+	protein lysine acetyltransferase	NA	NA	NA	NA
AWA10427.1\|1344755_1346111_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AWA10428.1\|1346152_1346476_+	hypothetical protein	NA	NA	NA	NA
AWA10429.1\|1346479_1347778_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
AWA10430.1\|1353743_1356317_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
AWA10431.1\|1356446_1357178_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AWA10432.1\|1357174_1358155_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
AWA10433.1\|1358286_1359024_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AWA10434.1\|1359294_1359630_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
AWA14201.1\|1359736_1359784_+	hypothetical protein	NA	NA	NA	NA
AWA10435.1\|1359884_1361045_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AWA10436.1\|1361041_1361914_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
AWA10437.1\|1361976_1363098_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AWA10438.1\|1363107_1364178_-	3-deoxy-7-phosphoheptulonate synthase	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
AWA10439.1\|1364520_1365030_+	DUF4154 domain-containing protein	NA	NA	NA	NA
AWA10440.1\|1365022_1366246_+	diguanylate cyclase	NA	NA	NA	NA
AWA10441.1\|1366259_1366742_+	hypothetical protein	NA	NA	NA	NA
AWA10442.1\|1366750_1368121_-	PepSY domain-containing protein	NA	NA	NA	NA
AWA10443.1\|1368177_1368636_-	DUF2946 domain-containing protein	NA	NA	NA	NA
AWA10444.1\|1368755_1369103_-	50S ribosomal protein L19	NA	NA	NA	NA
AWA10445.1\|1369142_1369910_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AWA10446.1\|1369941_1370490_-	ribosome maturation factor RimM	NA	NA	NA	NA
AWA10447.1\|1370508_1370757_-	30S ribosomal protein S16	NA	NA	NA	NA
AWA10448.1\|1371016_1372381_-	signal recognition particle protein	NA	NA	NA	NA
AWA10449.1\|1372544_1373336_+	inner membrane protein YpjD	NA	NA	NA	NA
AWA10450.1\|1373355_1374642_+	DUF21 domain-containing protein	NA	NA	NA	NA
AWA10451.1\|1374761_1375352_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
AWA10452.1\|1375476_1376355_+	NAD(+) kinase	NA	NA	NA	NA
AWA10453.1\|1376441_1378103_+	DNA repair protein RecN	NA	NA	NA	NA
AWA10454.1\|1378250_1378592_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AWA10455.1\|1378658_1378949_-	RnfH family protein	NA	NA	NA	NA
AWA10456.1\|1378938_1379415_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AWA10457.1\|1379525_1380008_+	SsrA-binding protein	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
AWA10458.1\|1380611_1380989_+	hypothetical protein	NA	NA	NA	NA
AWA10459.1\|1381016_1381235_-	levansucrase regulator	Q53ZE7	Salmonella_virus	1.9e-26	72.2
AWA10460.1\|1381301_1382396_-	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
AWA10461.1\|1382392_1382878_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
AWA10462.1\|1382874_1385505_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.9e-115	41.9
AWA10463.1\|1385497_1385617_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AWA10464.1\|1385631_1385931_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
AWA10465.1\|1385983_1386499_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
AWA10466.1\|1386508_1387681_-\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
AWA10467.1\|1387829_1388903_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
AWA10468.1\|1388954_1390073_-	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
AWA10469.1\|1390082_1392032_-\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	1.0e-06	38.9
AWA14202.1\|1392033_1392705_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
AWA10470.1\|1392697_1393606_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
AWA10471.1\|1393592_1393955_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
AWA10472.1\|1393951_1394524_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
AWA10473.1\|1394618_1395485_+	hypothetical protein	NA	NA	NA	NA
AWA10474.1\|1395507_1395954_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
AWA10475.1\|1395946_1396369_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
AWA10476.1\|1396331_1396535_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	3.0e-23	77.6
AWA10477.1\|1396464_1396893_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
AWA10478.1\|1396889_1397273_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
AWA10479.1\|1397277_1397787_-	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
AWA14203.1\|1397767_1397983_-	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
AWA10480.1\|1397986_1398190_-\|tail	phage tail protein	E5G6M9	Salmonella_phage	9.8e-30	89.6
AWA10481.1\|1398189_1398654_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
AWA10482.1\|1398749_1399403_-	hypothetical protein	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
AWA10483.1\|1399406_1400459_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
AWA10484.1\|1400475_1401309_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
AWA10485.1\|1401449_1403213_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
AWA10486.1\|1403212_1404256_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
AWA14204.1\|1404312_1404582_-	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
AWA10487.1\|1405103_1406105_+	hypothetical protein	NA	NA	NA	NA
AWA10488.1\|1406104_1407184_+	hypothetical protein	NA	NA	NA	NA
AWA10489.1\|1407170_1407854_+	hypothetical protein	NA	NA	NA	NA
AWA10490.1\|1407949_1408183_-	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
AWA10491.1\|1408194_1408383_-	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
AWA10492.1\|1408490_1409975_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AWA10493.1\|1409974_1410226_-	hypothetical protein	NA	NA	NA	NA
AWA14205.1\|1410378_1410636_+	lF-82	NA	NA	NA	NA
AWA10494.1\|1410713_1411298_+\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.2e-90	88.6
AWA10495.1\|1411294_1412770_+\|terminase	terminase	Q858H3	Salmonella_phage	6.4e-280	93.1
AWA10496.1\|1412813_1413185_-	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	3.7e-59	91.9
AWA10497.1\|1413234_1413477_+	hypothetical protein	NA	NA	NA	NA
AWA10498.1\|1413938_1414145_+	hypothetical protein	T1SA67	Salmonella_phage	4.8e-08	88.2
AWA10499.1\|1414159_1415842_+\|tail	phage tail protein	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	1.5e-264	84.4
AWA10500.1\|1415838_1416135_+	hypothetical protein	T1SBI9	Salmonella_phage	1.2e-33	70.4
AWA10501.1\|1416137_1416818_+	peptidase	G9L6C4	Escherichia_phage	6.1e-76	84.0
AWA10502.1\|1416832_1417819_+	hypothetical protein	A0A193GZ49	Enterobacter_phage	2.5e-179	94.2
AWA10503.1\|1417872_1418310_+	hypothetical protein	A0A193GYT9	Enterobacter_phage	1.3e-66	91.7
AWA10504.1\|1418320_1418662_+	hypothetical protein	G9L6C7	Escherichia_phage	2.4e-36	70.8
AWA10505.1\|1418712_1419036_+	hypothetical protein	G9L6C8	Escherichia_phage	5.3e-46	85.0
AWA10506.1\|1419035_1419641_+	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	4.0e-87	77.0
AWA10507.1\|1419640_1422118_+	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	84.4
AWA10508.1\|1422117_1422582_+	hypothetical protein	Q858G2	Salmonella_phage	1.5e-70	81.2
AWA10509.1\|1422581_1423121_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	8.0e-71	80.0
AWA10510.1\|1423131_1425666_+	hypothetical protein	Q858G0	Salmonella_phage	0.0e+00	84.1
AWA10511.1\|1425665_1427576_+	hypothetical protein	Q858F9	Salmonella_phage	5.4e-287	82.7
AWA10512.1\|1427575_1430332_+	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	95.4
AWA10513.1\|1430328_1430523_+	hypothetical protein	Q858F7	Salmonella_phage	6.5e-15	67.2
AWA10514.1\|1430557_1430710_-	transmembrane anchored protein	G9L6D9	Escherichia_phage	2.5e-14	83.7
AWA10515.1\|1430808_1431105_-	hypothetical protein	T1SA06	Salmonella_phage	6.9e-24	63.9
AWA10516.1\|1433932_1434196_+	hypothetical protein	NA	NA	NA	NA
AWA10517.1\|1434236_1435370_-	hypothetical protein	NA	NA	NA	NA
AWA14206.1\|1435358_1435445_+	ABC transporter	NA	NA	NA	NA
AWA10518.1\|1435483_1436464_-\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AWA10519.1\|1437332_1438595_-\|transposase	IS1380 family transposase ISEc9	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
AWA10520.1\|1439485_1439626_-	ABC transporter	NA	NA	NA	NA
AWA10521.1\|1439703_1441020_+	right-handed parallel beta-helix repeat-containing protein	A0A0K2FI18	Enterobacter_phage	2.3e-34	32.3
AWA10522.1\|1441106_1441511_+	hypothetical protein	T1SA79	Salmonella_phage	8.7e-54	81.1
AWA10523.1\|1441497_1441803_+\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	81.4
AWA10524.1\|1441792_1442422_+	endolysin	Q858F0	Salmonella_phage	1.8e-90	76.9
AWA10525.1\|1442418_1442919_+	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	1.3e-59	76.9
AWA10526.1\|1443105_1444974_-	phosphatase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6

DBSCAN-SWA_4

1777325 : 1784230

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWA14222.1\|1777325_1778189_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.4e-10	27.5
AWA10812.1\|1778199_1778973_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
AWA14223.1\|1779213_1780107_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
AWA10813.1\|1780352_1781714_-	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
AWA10814.1\|1782032_1782755_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AWA10815.1\|1782751_1784230_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.9e-29	28.3

DBSCAN-SWA_5

1827575 : 1839250

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWA10844.1\|1827575_1828982_+	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7
AWA10845.1\|1829208_1830624_+	mannose-1-phosphate guanylyltransferase	A0A1V0SH58	Hokovirus	1.4e-53	31.0
AWA10846.1\|1830645_1832016_+	phosphomannomutase	A0A127AWJ1	Bacillus_phage	6.4e-32	25.9
AWA14226.1\|1832170_1833235_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	9.8e-105	54.7
AWA10847.1\|1833248_1834118_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	1.7e-110	66.7
AWA10848.1\|1834149_1835040_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	34.2
AWA10849.1\|1835054_1835609_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.9e-52	58.2
AWA10850.1\|1835788_1836955_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	9.1e-112	54.7
AWA10851.1\|1837317_1838229_+	acyltransferase	NA	NA	NA	NA
AWA10852.1\|1838269_1839250_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1

DBSCAN-SWA_6

2831555 : 2842442

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWA11774.1\|2831555_2834663_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
AWA11775.1\|2834717_2835983_+	MFS transporter	NA	NA	NA	NA
AWA11776.1\|2836013_2837102_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
AWA11777.1\|2837188_2837449_-	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
AWA11778.1\|2837746_2838607_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AWA11779.1\|2838627_2839389_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AWA11780.1\|2839649_2840552_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
AWA11781.1\|2840563_2841829_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
AWA11782.1\|2841821_2842442_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_7

3025843 : 3163617

158

uncultured_Caudovirales_phage(21.43%)

lysis,tail,head,transposase,plate,integrase,protease,holin,terminase

attL 3051413:3051430|attR 3172057:3172074

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWA11954.1\|3025843_3026929_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AWA11955.1\|3026892_3028647_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AWA11956.1\|3030318_3033744_-	type VI secretion protein VasK	NA	NA	NA	NA
AWA11957.1\|3033727_3034867_-	hypothetical protein	NA	NA	NA	NA
AWA11958.1\|3034863_3035121_-	PAAR domain-containing protein	NA	NA	NA	NA
AWA11959.1\|3035165_3037583_-	DUF2235 domain-containing protein	NA	NA	NA	NA
AWA11960.1\|3037570_3038101_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AWA11961.1\|3038168_3038699_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AWA11962.1\|3038767_3039298_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AWA11963.1\|3039365_3039896_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AWA11964.1\|3039964_3040495_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AWA11965.1\|3040558_3041338_-	DUF4123 domain-containing protein	NA	NA	NA	NA
AWA11966.1\|3041338_3043717_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	9.2e-18	33.8
AWA11967.1\|3043709_3046364_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.5e-96	33.4
AWA11968.1\|3046628_3047120_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AWA11969.1\|3047124_3048831_-	OmpA family protein	NA	NA	NA	NA
AWA11970.1\|3048827_3049517_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AWA14277.1\|3049513_3050854_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AWA11971.1\|3050866_3052411_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
3051413:3051430	attL	NA	NA	NA	NA
AWA11972.1\|3052453_3052945_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AWA11973.1\|3054432_3054576_-	ABC transporter	NA	NA	NA	NA
AWA11974.1\|3054989_3055238_+	damage-inducible protein DinI	S5MQI1	Escherichia_phage	1.4e-25	70.4
AWA11975.1\|3055460_3055745_-	hypothetical protein	NA	NA	NA	NA
AWA11976.1\|3055849_3056059_-	hypothetical protein	NA	NA	NA	NA
AWA11977.1\|3056055_3056787_-	hypothetical protein	NA	NA	NA	NA
AWA14278.1\|3056797_3057526_-	hypothetical protein	NA	NA	NA	NA
AWA11978.1\|3059876_3060074_-	hypothetical protein	NA	NA	NA	NA
AWA11979.1\|3060073_3060940_-	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5
AWA11980.1\|3060939_3061713_-	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
AWA11981.1\|3061709_3062906_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
AWA11982.1\|3062905_3063259_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
AWA11983.1\|3063260_3063914_-	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
AWA11984.1\|3063967_3064534_-	hypothetical protein	NA	NA	NA	NA
AWA11985.1\|3064570_3064756_+	hypothetical protein	NA	NA	NA	NA
AWA11986.1\|3064808_3065150_-	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
AWA11987.1\|3065149_3066172_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
AWA11988.1\|3066174_3066477_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
AWA11989.1\|3066477_3067077_-	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
AWA11990.1\|3067076_3069080_-	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
AWA11991.1\|3069069_3069222_-	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
AWA11992.1\|3069257_3069683_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
AWA11993.1\|3069686_3070127_-	DUF3277 domain-containing protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
AWA11994.1\|3070137_3071283_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
AWA11995.1\|3071286_3071727_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
AWA11996.1\|3071821_3072208_-\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
AWA11997.1\|3072207_3072714_-	hypothetical protein	NA	NA	NA	NA
AWA11998.1\|3072710_3073130_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
AWA11999.1\|3073098_3073380_-	hypothetical protein	NA	NA	NA	NA
AWA12000.1\|3073419_3074361_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
AWA12001.1\|3074372_3074867_-	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
AWA12002.1\|3074870_3076073_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
AWA14279.1\|3076124_3076673_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
AWA12003.1\|3076728_3078180_-	hypothetical protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
AWA12004.1\|3078417_3079818_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
AWA12005.1\|3079768_3080521_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
AWA12006.1\|3080622_3080943_-	negative regulator GrlR	NA	NA	NA	NA
AWA12007.1\|3081177_3081567_-	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
AWA12008.1\|3081563_3082094_-	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
AWA12009.1\|3082096_3082345_-\|lysis	lysis protein	NA	NA	NA	NA
AWA12010.1\|3082750_3083533_-	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
AWA12011.1\|3083529_3084006_-	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
AWA12012.1\|3084002_3084965_-	DNA primase	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
AWA12013.1\|3084966_3086625_-	helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
AWA12014.1\|3086933_3087227_-	hypothetical protein	A0A286S2B5	Klebsiella_phage	2.8e-38	97.6
AWA12015.1\|3087201_3087423_-	XRE family transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
AWA12016.1\|3087520_3088189_+	LexA family transcriptional repressor	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
AWA12017.1\|3088359_3088674_+	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
AWA12018.1\|3088666_3088855_+	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
AWA12019.1\|3089024_3089390_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
AWA12020.1\|3089382_3089637_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
AWA12021.1\|3089823_3090249_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
AWA12022.1\|3090245_3090440_+	hypothetical protein	NA	NA	NA	NA
AWA12023.1\|3090436_3091264_+\|protease	serine protease	Q8W654	Enterobacteria_phage	5.5e-111	84.0
AWA12024.1\|3091368_3091887_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
AWA12025.1\|3091892_3092603_+	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
AWA12026.1\|3092592_3092817_+	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
AWA12027.1\|3092813_3093026_+	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
AWA12028.1\|3093022_3093502_+	hypothetical protein	NA	NA	NA	NA
AWA12029.1\|3093680_3093923_+	AlpA family transcriptional regulator	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
AWA12030.1\|3093903_3095085_-	DUF4102 domain-containing protein	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
AWA12031.1\|3095281_3095830_+\|protease	protease	NA	NA	NA	NA
AWA12032.1\|3096028_3097561_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
AWA12033.1\|3097777_3098539_-	3-oxoacyl-ACP reductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5
AWA12034.1\|3098647_3099562_+	LysR family transcriptional regulator	NA	NA	NA	NA
AWA12035.1\|3099862_3100051_+	cold-shock protein	NA	NA	NA	NA
AWA12036.1\|3100121_3100430_-	anti-sigma regulatory factor	NA	NA	NA	NA
AWA12037.1\|3100435_3100573_+	glycosyl hydrolase family 2	NA	NA	NA	NA
AWA12038.1\|3100597_3101467_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	5.7e-50	42.1
AWA12039.1\|3101545_3102748_-	MFS transporter	NA	NA	NA	NA
AWA12040.1\|3102820_3103957_-	alpha/beta hydrolase	NA	NA	NA	NA
AWA12041.1\|3104129_3105014_+	LysR family transcriptional regulator	NA	NA	NA	NA
AWA12042.1\|3105138_3105972_-	hypothetical protein	NA	NA	NA	NA
AWA12043.1\|3106202_3106589_+	glyoxalase	NA	NA	NA	NA
AWA12044.1\|3106756_3108373_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
AWA12045.1\|3108558_3109266_+	murein tripeptide amidase MpaA	NA	NA	NA	NA
AWA12046.1\|3109262_3110228_-	L-Ala-D/L-Glu epimerase	NA	NA	NA	NA
AWA12047.1\|3110330_3110837_+	thiol peroxidase	NA	NA	NA	NA
AWA14280.1\|3110907_3111930_-	AbrB family transcriptional regulator	NA	NA	NA	NA
AWA12048.1\|3112061_3113603_-	transcriptional regulator TyrR	NA	NA	NA	NA
AWA12049.1\|3113775_3115089_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
AWA12050.1\|3115220_3116102_+	LysR family transcriptional regulator	NA	NA	NA	NA
AWA12051.1\|3116191_3117253_-	TIGR01620 family protein	NA	NA	NA	NA
AWA12052.1\|3117249_3118647_-	YcjX family protein	NA	NA	NA	NA
AWA12053.1\|3118749_3118968_-	phage shock protein D	NA	NA	NA	NA
AWA12054.1\|3118996_3119356_-	envelope stress response membrane protein PspC	NA	NA	NA	NA
AWA12055.1\|3119355_3119580_-	envelope stress response membrane protein PspB	NA	NA	NA	NA
AWA12056.1\|3119635_3120304_-	phage shock protein PspA	NA	NA	NA	NA
AWA12057.1\|3120471_3121446_+	phage shock protein operon transcriptional activator	NA	NA	NA	NA
AWA12058.1\|3121436_3122828_-	MFS transporter	NA	NA	NA	NA
AWA12059.1\|3122853_3124023_-	amidohydrolase	NA	NA	NA	NA
AWA12060.1\|3124194_3126504_+	AraC family transcriptional regulator	NA	NA	NA	NA
AWA12061.1\|3126482_3127313_-	XRE family transcriptional regulator	NA	NA	NA	NA
AWA12062.1\|3127423_3128329_+	NAD-dependent dehydratase	NA	NA	NA	NA
AWA12063.1\|3128662_3130306_+	peptide ABC transporter substrate-binding protein SapA	NA	NA	NA	NA
AWA12064.1\|3130302_3131268_+	peptide ABC transporter permease SapB	NA	NA	NA	NA
AWA12065.1\|3131472_3132144_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	4.5e-79	59.6
AWA14281.1\|3132330_3133158_+	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	8.4e-19	30.2
AWA12066.1\|3133233_3134499_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	9.6e-208	82.7
AWA12067.1\|3134500_3134920_-	translesion error-prone DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	1.4e-35	57.5
AWA12068.1\|3134999_3136484_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AWA12069.1\|3136483_3136735_-	hypothetical protein	NA	NA	NA	NA
AWA12070.1\|3137381_3137804_-	hypothetical protein	K7P834	Enterobacteria_phage	3.6e-26	45.3
AWA12071.1\|3138396_3139101_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWA12072.1\|3139716_3140064_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AWA14282.1\|3140227_3141019_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AWA12073.1\|3142000_3142705_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWA12074.1\|3142741_3143029_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	4.4e-36	95.4
AWA12075.1\|3143025_3143565_-	hypothetical protein	A0A286N2Q6	Klebsiella_phage	3.3e-101	98.9
AWA12076.1\|3143561_3143873_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	3.8e-49	100.0
AWA12077.1\|3144339_3145386_-\|transposase	IS481-like element ISKpn28 family transposase	A0A0M3LR35	Mannheimia_phage	1.3e-05	21.9
AWA14283.1\|3145611_3146301_-	antiterminator	I6PDF8	Cronobacter_phage	2.1e-55	53.1
AWA12078.1\|3146300_3146441_-	YlcG family protein	NA	NA	NA	NA
AWA12079.1\|3146437_3147076_-	hypothetical protein	H6WRY9	Salmonella_phage	3.2e-74	69.8
AWA12080.1\|3147068_3147737_-	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	1.4e-104	78.7
AWA12081.1\|3147733_3147901_-	NinE family protein	K7P7K0	Enterobacteria_phage	4.6e-09	62.5
AWA12082.1\|3147881_3148349_-	recombination protein NinB	Q8VNP6	Enterobacteria_phage	3.4e-33	45.8
AWA12083.1\|3148869_3149898_+	hypothetical protein	NA	NA	NA	NA
AWA12084.1\|3150105_3150351_-	hypothetical protein	NA	NA	NA	NA
AWA12085.1\|3150406_3150709_-	MarR family transcriptional regulator	NA	NA	NA	NA
AWA12086.1\|3150705_3151554_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	5.1e-88	60.1
AWA12087.1\|3151550_3152411_-	replication protein	K7PGT1	Enterobacteria_phage	1.0e-59	53.3
AWA12088.1\|3152496_3152718_-	transcriptional regulator	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
AWA12089.1\|3152758_3152986_-	transcriptional regulator	Q76H55	Enterobacteria_phage	1.4e-24	77.1
AWA14284.1\|3153097_3153796_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	3.7e-108	84.1
AWA12090.1\|3153818_3153938_+	hypothetical protein	NA	NA	NA	NA
AWA12091.1\|3154083_3155160_+	ParA family protein	H2BD62	Pseudomonas_phage	9.1e-58	37.9
AWA12092.1\|3155241_3155445_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	3.9e-18	71.6
AWA12093.1\|3155873_3156068_+	hypothetical protein	NA	NA	NA	NA
AWA12094.1\|3156156_3156441_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.1e-39	79.8
AWA12095.1\|3156456_3157302_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	1.8e-69	59.2
AWA12096.1\|3157587_3158268_+	exonuclease	A0A0M3ULE0	Salmonella_phage	8.2e-121	91.2
AWA12097.1\|3158264_3158693_+	regulator	M9NYX4	Enterobacteria_phage	7.5e-64	80.3
AWA12098.1\|3158689_3159352_+	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-105	84.6
AWA12099.1\|3159348_3159663_+	hypothetical protein	K7PM28	Enterobacteria_phage	1.6e-10	50.8
AWA14285.1\|3159559_3160747_-\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	1.1e-120	52.4
AWA12100.1\|3160923_3161814_+	peptide ABC transporter permease SapC	NA	NA	NA	NA
AWA12101.1\|3161813_3162806_+	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
AWA12102.1\|3162807_3163617_+	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9
3172057:3172074	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3291289 : 3379168

Klebsiella_phage(45.45%)

head,tail,portal,integrase,holin,terminase,capsid,tRNA

attL 3318092:3318106|attR 3376979:3376993

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWA12222.1\|3291289_3291790_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
AWA12223.1\|3291906_3292353_+	DUF441 domain-containing protein	NA	NA	NA	NA
AWA14290.1\|3292336_3293128_-	AraC family transcriptional regulator	NA	NA	NA	NA
AWA12224.1\|3293229_3294414_+	cyanate MFS transporter	NA	NA	NA	NA
AWA12225.1\|3294445_3295138_-	hypothetical protein	NA	NA	NA	NA
AWA12226.1\|3295283_3295793_+	DUF523 domain-containing protein	NA	NA	NA	NA
AWA12227.1\|3295779_3296136_+	DUF488 domain-containing protein	NA	NA	NA	NA
AWA12228.1\|3296125_3296365_-	DUF333 domain-containing protein	NA	NA	NA	NA
AWA12229.1\|3296665_3297679_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.4e-12	29.0
AWA12230.1\|3297736_3297838_+	hypothetical protein	NA	NA	NA	NA
AWA14291.1\|3297837_3297912_+	hypothetical protein	NA	NA	NA	NA
AWA12231.1\|3298029_3298155_+	hypothetical protein	NA	NA	NA	NA
AWA12232.1\|3298214_3298478_-	DUF2534 domain-containing protein	NA	NA	NA	NA
AWA12233.1\|3298608_3299247_-	leucine efflux protein	NA	NA	NA	NA
AWA12234.1\|3299336_3300251_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
AWA12235.1\|3300466_3300658_+	hypothetical protein	NA	NA	NA	NA
AWA12236.1\|3300912_3301956_-	type II asparaginase	NA	NA	NA	NA
AWA12237.1\|3302258_3303467_+	phosphodiesterase	NA	NA	NA	NA
AWA12238.1\|3303540_3305325_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
AWA12239.1\|3305331_3306222_-	LysR family transcriptional regulator	NA	NA	NA	NA
AWA12240.1\|3306342_3307851_+	3,4-dihydroxybenzoate decarboxylase	NA	NA	NA	NA
AWA12241.1\|3308161_3308848_-	diguanylate phosphodiesterase	NA	NA	NA	NA
AWA12242.1\|3309245_3309425_-	hypothetical protein	NA	NA	NA	NA
AWA12243.1\|3309464_3310097_-	DNA-binding protein	NA	NA	NA	NA
AWA12244.1\|3310663_3310861_+	hypothetical protein	NA	NA	NA	NA
AWA12245.1\|3310976_3311987_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AWA12246.1\|3311983_3313390_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AWA12247.1\|3313445_3314333_-	manganese catalase family protein	NA	NA	NA	NA
AWA12248.1\|3314349_3314856_-	ferritin-like domain-containing protein	NA	NA	NA	NA
AWA12249.1\|3314882_3315377_-	ferritin-like domain-containing protein	NA	NA	NA	NA
AWA12250.1\|3315467_3315653_-	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA
AWA12251.1\|3316274_3317468_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
AWA12252.1\|3317580_3317808_+	DUF1272 domain-containing protein	NA	NA	NA	NA
3318092:3318106	attL	NA	NA	NA	NA
AWA12253.1\|3318244_3318568_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AWA12254.1\|3318560_3318953_+	amino acid-binding protein	NA	NA	NA	NA
AWA12255.1\|3318949_3319663_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AWA12256.1\|3319935_3320088_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
AWA12257.1\|3320242_3321739_-\|tail	phage tail protein	A0A0P0IDN1	Klebsiella_phage	1.4e-125	63.7
AWA12258.1\|3321807_3334512_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	47.1
AWA12259.1\|3334574_3335168_-\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	8.0e-80	76.6
AWA12260.1\|3335194_3335617_-	hypothetical protein	J9Q806	Salmonella_phage	5.9e-29	50.0
AWA12261.1\|3335658_3336369_-	peptidase P60	Q6UAW4	Klebsiella_phage	1.9e-136	90.3
AWA12262.1\|3336370_3337126_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	4.6e-125	80.5
AWA12263.1\|3337122_3337461_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	1.4e-57	88.4
AWA12264.1\|3337460_3340796_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	88.3
AWA12265.1\|3340795_3341014_-	hypothetical protein	Q6UAW9	Klebsiella_phage	5.4e-34	90.5
AWA12266.1\|3341028_3341394_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
AWA12267.1\|3341451_3341913_-\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
AWA12268.1\|3341944_3342346_-	hypothetical protein	Q6UAX1	Klebsiella_phage	2.3e-62	94.0
AWA12269.1\|3342342_3342732_-	hypothetical protein	Q6UAX2	Klebsiella_phage	9.6e-58	86.0
AWA12270.1\|3342712_3343051_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	2.8e-53	90.2
AWA12271.1\|3343047_3343365_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
AWA12272.1\|3343345_3343606_-	hypothetical protein	Q6UAX5	Klebsiella_phage	7.4e-22	60.5
AWA12273.1\|3343664_3344951_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	9.8e-216	89.0
AWA12274.1\|3345028_3345949_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	9.6e-149	88.2
AWA12275.1\|3345985_3347245_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	1.8e-222	89.8
AWA12276.1\|3347244_3347424_-	hypothetical protein	Q6UAX9	Klebsiella_phage	3.1e-11	57.6
AWA12277.1\|3347417_3349139_-\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	1.5e-190	57.4
AWA12278.1\|3349138_3349573_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
AWA12279.1\|3349821_3350253_-	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.6
AWA12280.1\|3350249_3350573_-	hypothetical protein	NA	NA	NA	NA
AWA12281.1\|3350524_3350887_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.2e-57	83.3
AWA12282.1\|3351213_3351438_+	hypothetical protein	NA	NA	NA	NA
AWA12283.1\|3351476_3351914_-	hypothetical protein	NA	NA	NA	NA
AWA12284.1\|3352863_3353214_-	hypothetical protein	R9TPM9	Aeromonas_phage	7.9e-11	38.1
AWA12285.1\|3353210_3353708_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.1e-77	84.6
AWA12286.1\|3353707_3353923_-\|holin	holin	A5LH82	Enterobacteria_phage	2.7e-30	88.7
AWA12287.1\|3356174_3356777_-	hypothetical protein	H9C175	Pectobacterium_phage	1.1e-76	68.6
AWA12288.1\|3356793_3357825_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.7e-96	49.6
AWA12289.1\|3357824_3358028_-	hypothetical protein	NA	NA	NA	NA
AWA12290.1\|3358024_3358417_-	DNA-binding protein	K7PHB4	Enterobacterial_phage	8.0e-12	36.6
AWA12291.1\|3358457_3358748_-	hypothetical protein	H6WRY6	Salmonella_phage	8.0e-17	56.9
AWA12292.1\|3358759_3358993_-	DinI family protein	K7PM44	Enterobacteria_phage	3.7e-25	71.1
AWA12293.1\|3359071_3360556_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AWA12294.1\|3360555_3360807_-	hypothetical protein	NA	NA	NA	NA
AWA12295.1\|3361396_3362758_-	dGTPase	NA	NA	NA	NA
AWA12296.1\|3362931_3363645_-	hypothetical protein	NA	NA	NA	NA
AWA14292.1\|3363996_3364866_+	hypothetical protein	NA	NA	NA	NA
AWA12297.1\|3364954_3366346_+	hypothetical protein	NA	NA	NA	NA
AWA12298.1\|3366694_3367135_-	hypothetical protein	NA	NA	NA	NA
AWA12299.1\|3367148_3367613_-	replication protein	A0A0U2JGJ0	Escherichia_phage	4.1e-63	72.2
AWA14293.1\|3367605_3368610_-	DNA-binding protein	A0A0U2RT81	Escherichia_phage	1.4e-31	40.0
AWA12300.1\|3368669_3369224_-	hypothetical protein	NA	NA	NA	NA
AWA12301.1\|3369226_3369451_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.3e-19	62.5
AWA12302.1\|3369539_3369977_+	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	1.3e-39	62.2
AWA12303.1\|3370298_3370613_-	hypothetical protein	NA	NA	NA	NA
AWA12304.1\|3370775_3370994_+	hypothetical protein	NA	NA	NA	NA
AWA12305.1\|3371003_3371198_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AWA12306.1\|3371240_3371585_+	transcriptional regulator	NA	NA	NA	NA
AWA12307.1\|3371726_3373865_+	exonuclease	S4TNL0	Salmonella_phage	5.6e-99	42.7
AWA12308.1\|3373917_3374163_+	excisionase	NA	NA	NA	NA
AWA12309.1\|3374143_3375271_+\|integrase	integrase	O21925	Phage_21	4.4e-119	58.4
AWA12310.1\|3375388_3376639_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
AWA12311.1\|3376879_3377530_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
3376979:3376993	attR	NA	NA	NA	NA
AWA12312.1\|3377546_3378005_+	NUDIX hydrolase	NA	NA	NA	NA
AWA14294.1\|3378061_3379168_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_9

3595147 : 3688097

Salmonella_phage(57.89%)

lysis,tail,head,plate,portal,integrase,protease,capsid,tRNA

attL 3633740:3633755|attR 3690530:3690545

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWA12506.1\|3595147_3596440_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.3e-94	44.7
AWA12507.1\|3596530_3597874_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	7.3e-81	40.8
AWA12508.1\|3597882_3598494_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AWA12509.1\|3598616_3602870_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.2e-88	49.2
AWA12510.1\|3603005_3603500_-	leucine-responsive regulatory protein	NA	NA	NA	NA
AWA12511.1\|3604032_3605001_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.2e-62	44.0
AWA12512.1\|3605115_3606882_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	2.3e-21	25.9
AWA12513.1\|3606882_3608604_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
AWA12514.1\|3608648_3609350_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AWA12515.1\|3609703_3609922_+	translation initiation factor IF-1	NA	NA	NA	NA
AWA12516.1\|3610042_3612322_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AWA12517.1\|3612352_3612670_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AWA12518.1\|3612995_3613217_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AWA12519.1\|3613171_3613354_-	hypothetical protein	NA	NA	NA	NA
AWA12520.1\|3613293_3615234_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AWA12521.1\|3615230_3616346_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
AWA12522.1\|3616492_3618151_-	ATP-dependent endonuclease	NA	NA	NA	NA
AWA12523.1\|3618570_3619266_+	aquaporin Z	NA	NA	NA	NA
AWA12524.1\|3619381_3620281_+	lysine exporter LysO family protein	NA	NA	NA	NA
AWA14303.1\|3620424_3622077_+	hydroxylamine reductase	NA	NA	NA	NA
AWA12525.1\|3622087_3623056_+	NADH oxidoreductase	NA	NA	NA	NA
AWA12526.1\|3623006_3623210_+	hypothetical protein	NA	NA	NA	NA
AWA12527.1\|3623267_3623702_-	DoxX family protein	NA	NA	NA	NA
AWA14304.1\|3623853_3625572_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
AWA12528.1\|3625610_3626612_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
AWA12529.1\|3626622_3628065_+	DUF2867 domain-containing protein	NA	NA	NA	NA
AWA12530.1\|3628152_3629166_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AWA12531.1\|3629162_3629993_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	4.1e-05	31.6
AWA12532.1\|3630024_3631164_-	GGDEF domain-containing protein	NA	NA	NA	NA
AWA12533.1\|3631216_3631396_+	hypothetical protein	NA	NA	NA	NA
AWA12534.1\|3632041_3632557_+	lipoprotein	NA	NA	NA	NA
AWA12535.1\|3632783_3633512_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.2e-29	37.1
AWA14305.1\|3633532_3634264_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
3633740:3633755	attL	NA	NA	NA	NA
AWA12536.1\|3634270_3634987_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
AWA12537.1\|3634986_3635655_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA
AWA12538.1\|3635838_3636570_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
AWA12539.1\|3636612_3638085_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-28	31.8
AWA12540.1\|3638081_3638798_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.1e-34	36.9
AWA12541.1\|3638876_3640004_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A2K5B251	Erysipelothrix_phage	1.3e-19	25.6
AWA12542.1\|3640045_3640534_-	DUF2593 domain-containing protein	NA	NA	NA	NA
AWA12543.1\|3640591_3641437_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA
AWA12544.1\|3641433_3642387_-	putrescine ABC transporter permease	NA	NA	NA	NA
AWA14306.1\|3642397_3643531_-	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-30	34.9
AWA12545.1\|3643694_3644807_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
AWA12546.1\|3645155_3645635_-	YbjN domain-containing protein	NA	NA	NA	NA
AWA12547.1\|3645723_3646626_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	2.0e-34	35.3
AWA12548.1\|3647447_3647735_-	hypothetical protein	NA	NA	NA	NA
AWA12549.1\|3647937_3648201_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.6e-27	73.1
AWA12550.1\|3648207_3648591_-	hypothetical protein	NA	NA	NA	NA
AWA14307.1\|3648857_3650543_+	transporter	NA	NA	NA	NA
AWA12551.1\|3650762_3650981_-	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-20	69.0
AWA12552.1\|3651072_3652173_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
AWA12553.1\|3652169_3652655_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
AWA12554.1\|3652651_3655279_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
AWA12555.1\|3655271_3655391_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AWA12556.1\|3655405_3655705_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
AWA12557.1\|3655757_3656273_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
AWA12558.1\|3656282_3657455_-\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
AWA12559.1\|3658698_3658902_-	hypothetical protein	NA	NA	NA	NA
AWA12560.1\|3658898_3659630_-	hypothetical protein	NA	NA	NA	NA
AWA12561.1\|3659633_3662585_-	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
AWA14308.1\|3662586_3663186_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
AWA12562.1\|3663178_3664087_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
AWA12563.1\|3664073_3664436_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	4.9e-48	83.9
AWA12564.1\|3664432_3665005_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
AWA12565.1\|3665099_3665792_+	hypothetical protein	NA	NA	NA	NA
AWA12566.1\|3665788_3666235_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
AWA12567.1\|3666227_3666659_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
AWA12568.1\|3666754_3667183_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
AWA12569.1\|3667179_3667563_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
AWA12570.1\|3667567_3668077_-	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
AWA12571.1\|3668057_3668273_-	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
AWA12572.1\|3668276_3668480_-\|tail	phage tail protein	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
AWA12573.1\|3668479_3668944_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
AWA12574.1\|3669039_3669690_-	hypothetical protein	E5G6M7	Salmonella_phage	8.7e-112	96.3
AWA12575.1\|3669693_3670752_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
AWA12576.1\|3670768_3671602_-\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
AWA12577.1\|3671744_3673511_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
AWA12578.1\|3673510_3674536_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
AWA12579.1\|3674597_3676340_-	hypothetical protein	NA	NA	NA	NA
AWA12580.1\|3676615_3677293_-	hypothetical protein	NA	NA	NA	NA
AWA12581.1\|3677407_3677713_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AWA14309.1\|3677651_3677840_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
AWA12582.1\|3677993_3680408_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
AWA12583.1\|3680404_3681262_-	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-156	95.4
AWA12584.1\|3681258_3681486_-	hypothetical protein	E5G6L7	Salmonella_phage	6.0e-36	98.7
AWA12585.1\|3681485_3681719_-	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
AWA12586.1\|3681786_3682128_-	hypothetical protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
AWA12587.1\|3682091_3682292_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
AWA12588.1\|3682299_3682809_-	hypothetical protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
AWA12589.1\|3682841_3683063_-	regulator	NA	NA	NA	NA
AWA12590.1\|3683208_3684087_+	Repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.7e-30	39.9
AWA12591.1\|3684098_3685043_+	hypothetical protein	NA	NA	NA	NA
AWA12592.1\|3685141_3686626_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AWA12593.1\|3686625_3686877_-	hypothetical protein	NA	NA	NA	NA
AWA12594.1\|3687044_3688097_+\|integrase	integrase	A0A218M4I3	Erwinia_phage	1.0e-106	57.0
3690530:3690545	attR	NA	NA	NA	NA

DBSCAN-SWA_10

4331795 : 4343448

Enterobacteria_phage(70.0%)

integrase

attL 4332245:4332259|attR 4355301:4355315

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWA13168.1\|4331795_4332899_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
4332245:4332259	attL	NA	NA	NA	NA
AWA13169.1\|4332909_4334163_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
AWA13170.1\|4334515_4335706_+\|integrase	integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
AWA13171.1\|4335693_4336644_+	cobyrinic acid a,c-diamide synthase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
AWA13172.1\|4336643_4337069_+	hypothetical protein	NA	NA	NA	NA
AWA13173.1\|4337636_4338203_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
AWA13174.1\|4338220_4338466_-	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
AWA13175.1\|4338462_4339200_-	glycoprotein 3	Q7M2A2	Enterobacteria_phage	1.9e-70	59.4
AWA13176.1\|4339741_4340008_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
AWA13177.1\|4340004_4340562_+	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
AWA13178.1\|4340558_4340786_+	hypothetical protein	NA	NA	NA	NA
AWA13179.1\|4340782_4341103_+	hypothetical protein	NA	NA	NA	NA
AWA13180.1\|4341114_4343448_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
4355301:4355315	attR	NA	NA	NA	NA

DBSCAN-SWA_11

4812991 : 4822516

Enterobacteria_phage(83.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWA13585.1\|4812991_4815325_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.9
AWA13586.1\|4815339_4815660_-	hypothetical protein	NA	NA	NA	NA
AWA13587.1\|4815656_4815884_-	hypothetical protein	NA	NA	NA	NA
AWA13588.1\|4815880_4816429_-	Ash-like/host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.1e-30	69.4
AWA13589.1\|4817252_4817990_+	glycoprotein 3	Q7M2A2	Enterobacteria_phage	1.1e-70	59.4
AWA13590.1\|4817986_4818232_+	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
AWA13591.1\|4818249_4818816_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
AWA13592.1\|4819556_4820636_+	hypothetical protein	NA	NA	NA	NA
AWA13593.1\|4820636_4821173_+	hypothetical protein	NA	NA	NA	NA
AWA13594.1\|4821535_4822516_+\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP028582

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP028583

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection