CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP023863	Prevotella jejuni strain CD3:33 chromosome I, complete sequence	0 crisprs	DEDDh,cas3,RT	0	0	133	0
CP023864	Prevotella jejuni strain CD3:33 chromosome II, complete sequence	23 crisprs	cas3,cas1,cas2,RT,DEDDh	11	35	1	3

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 2063

Burkholderia_phage(100.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI53873.1\|427_904_+	hypothetical protein	NA	NA	NA	NA
AUI53874.1\|857_2063_-\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	2.4e-51	32.2

DBSCAN-SWA_2

15643 : 16840

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI53884.1\|15643_16840_+	serine/threonine protein kinase	A0A1V0SGY7	Hokovirus	3.5e-10	33.6

DBSCAN-SWA_3

22014 : 23916

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55378.1\|22014_23916_+	type IIA DNA topoisomerase subunit B	A0A172JHT4	Bacillus_phage	1.8e-61	32.6

DBSCAN-SWA_4

53099 : 56958

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI53915.1\|53099_54134_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	8.3e-08	26.2
AUI53916.1\|54395_55331_+	YitT family protein	NA	NA	NA	NA
AUI53917.1\|55492_56107_-	glutathione peroxidase	NA	NA	NA	NA
AUI53918.1\|56265_56958_-	NAD-dependent protein deacylase	A0A2C9CZC8	Yersinia_phage	1.2e-21	36.7

DBSCAN-SWA_5

70903 : 72826

Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI53928.1\|70903_72826_-	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.8e-55	35.6

DBSCAN-SWA_6

99030 : 99549

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI53941.1\|99030_99549_-	TIGR00730 family Rossman fold protein	A0A1V0S9E9	Catovirus	3.8e-09	28.3

DBSCAN-SWA_7

103465 : 104707

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55381.1\|103465_104707_+	insulinase family protein	A0A2K9L1M6	Tupanvirus	1.2e-42	28.2

DBSCAN-SWA_8

107782 : 108868

Lake_Baikal_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI53947.1\|107782_108868_-	DNA/RNA non-specific endonuclease	A0A2H4N7Z3	Lake_Baikal_phage	7.1e-18	28.9

DBSCAN-SWA_9

126996 : 128901

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI53959.1\|126996_128901_+	2,6-beta-D-fructofuranosidase	F8WPR5	Bacillus_phage	1.3e-59	32.0

DBSCAN-SWA_10

141059 : 147084

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI53965.1\|141059_142754_+	2,6-beta-D-fructofuranosidase	F8WPR5	Bacillus_phage	6.7e-55	34.6
AUI53966.1\|142919_144083_+	MFS transporter	NA	NA	NA	NA
AUI53967.1\|144090_144972_+	carbohydrate kinase	NA	NA	NA	NA
AUI53968.1\|145539_147084_+	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	9.5e-32	27.3

DBSCAN-SWA_11

150201 : 153153

Ralstonia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI53970.1\|150201_150738_+	DNA mismatch repair protein MutT	B2ZXX2	Ralstonia_phage	2.1e-07	30.9
AUI53971.1\|150816_153153_+	DNA topoisomerase I	A0A0G2Y787	Acanthamoeba_polyphaga_mimivirus	9.9e-142	40.0

DBSCAN-SWA_12

162387 : 163392

Microcystis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI53979.1\|162387_163392_-	sugar tyrosine-protein kinase	A0A7K9	Microcystis_virus	7.8e-19	49.0

DBSCAN-SWA_13

168664 : 170344

Organic_Lake_phycodnavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI53984.1\|168664_170344_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	4.5e-27	33.5

DBSCAN-SWA_14

208291 : 218218

Cafeteria_roenbergensis_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54006.1\|208291_211153_+	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	4.8e-21	23.5
AUI54007.1\|211509_212955_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
AUI54008.1\|212969_213374_+	hypothetical protein	NA	NA	NA	NA
AUI54009.1\|213386_214142_+	Fe-S cluster assembly ATPase SufC	A0A285PWH2	Cedratvirus	3.9e-07	31.1
AUI54010.1\|214394_215738_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
AUI54011.1\|215840_217058_+	cysteine desulfurase	Q2XUY6	environmental_halophage	3.6e-103	43.6
AUI55387.1\|217153_217447_-	hypothetical protein	NA	NA	NA	NA
AUI54012.1\|217615_218218_+	ribonuclease HII	E3T5H8	Cafeteria_roenbergensis_virus	5.9e-30	44.1

DBSCAN-SWA_15

227008 : 232166

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54020.1\|227008_228982_+	DNA gyrase subunit B	G3M9Z3	Bacillus_virus	1.4e-141	45.7
AUI55388.1\|229531_230416_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUI54021.1\|230600_231191_-	DUF3109 domain-containing protein	NA	NA	NA	NA
AUI54022.1\|231500_232166_-	uracil-DNA glycosylase	V5NWU7	Chelonid_alphaherpesvirus	3.5e-44	42.7

DBSCAN-SWA_16

248002 : 248950

unidentified_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54035.1\|248002_248950_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.6e-18	27.0

DBSCAN-SWA_17

284323 : 286480

unidentified_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54058.1\|284323_286480_-	hypothetical protein	H7BUJ6	unidentified_phage	4.2e-86	42.1

DBSCAN-SWA_18

295642 : 297670

Cafeteria_roenbergensis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54065.1\|295642_297670_-	peptidase M13	E3T4I7	Cafeteria_roenbergensis_virus	1.8e-75	30.4

DBSCAN-SWA_19

316899 : 317730

Catovirus(100.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54080.1\|316899_317730_+\|holin	lipopolysaccharide cholinephosphotransferase	A0A1V0SAS8	Catovirus	6.9e-05	39.2

DBSCAN-SWA_20

327401 : 328505

NY_014_poxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54087.1\|327401_328505_-	guanylate kinase	A0A223FNL1	NY_014_poxvirus	2.7e-20	34.7

DBSCAN-SWA_21

337723 : 341470

Equid_gammaherpesvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54097.1\|337723_341470_-	phosphoribosylformylglycinamidine synthase	A0A0B4Q6P6	Equid_gammaherpesvirus	4.0e-36	24.6

DBSCAN-SWA_22

359402 : 360884

Microcystis_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54107.1\|359402_360884_-	gliding motility-associated lipoprotein GldK	A0A075BSL8	Microcystis_phage	2.6e-10	31.9

DBSCAN-SWA_23

386014 : 392009

Acinetobacter_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55394.1\|386014_387802_+	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	3.4e-118	38.7
AUI54123.1\|388828_389020_+	30S ribosomal protein S21	NA	NA	NA	NA
AUI54124.1\|389091_389976_+	tyrosine recombinase XerC	T2KT84	uncultured_phage	1.3e-06	30.6
AUI54125.1\|389998_390298_+	ribosomal subunit interface protein	NA	NA	NA	NA
AUI54126.1\|390812_392009_+	elongation factor Tu	A0A2H4UVR3	Bodo_saltans_virus	7.6e-13	26.0

DBSCAN-SWA_24

395247 : 403456

Chrysochromulina_ericina_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54133.1\|395247_399057_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	3.8e-34	33.0
AUI54134.1\|399085_403456_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	4.7e-68	25.7

DBSCAN-SWA_25

429856 : 431974

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54153.1\|429856_431974_+	elongation factor G	E4ZFJ7	Streptococcus_phage	1.6e-53	25.9

DBSCAN-SWA_26

479806 : 480601

Sinorhizobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54201.1\|479806_480601_-	septal ring lytic transglycosylase RlpA family protein	S5MVR9	Sinorhizobium_phage	1.2e-19	45.9

DBSCAN-SWA_27

505618 : 507589

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54222.1\|505618_507589_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	1.7e-09	32.0

DBSCAN-SWA_28

514966 : 522314

Phaeocystis_pouchetii_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54228.1\|514966_516784_+	DNA mismatch repair protein MutS	F2QAF8	Phaeocystis_pouchetii_virus	3.7e-11	29.3
AUI54229.1\|517034_517850_-	HAD family phosphatase	NA	NA	NA	NA
AUI54230.1\|518106_518814_+	MIP family channel protein	M1HWZ0	Paramecium_bursaria_Chlorella_virus	5.9e-05	23.0
AUI54231.1\|519017_520031_+	fructose-1,6-bisphosphate aldolase, class II	NA	NA	NA	NA
AUI54232.1\|520175_521693_-	bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
AUI54233.1\|521774_522314_+	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	6.2e-15	33.9

DBSCAN-SWA_29

542895 : 544101

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54253.1\|542895_544101_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	5.2e-102	47.7

DBSCAN-SWA_30

557384 : 557981

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54265.1\|557384_557981_+	IMP cyclohydrolase	Q58MG3	Prochlorococcus_phage	1.5e-33	41.9

DBSCAN-SWA_31

567471 : 568611

Streptococcus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54273.1\|567471_568611_-	DNA polymerase III subunit delta	A0A1U9WR94	Streptococcus_virus	1.8e-11	28.1

DBSCAN-SWA_32

573894 : 575743

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55405.1\|573894_574494_-	thymidine kinase	Q6GYZ9	Mycoplasma_phage	5.8e-30	42.8
AUI54278.1\|575020_575743_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	8.6e-52	46.6

DBSCAN-SWA_33

597131 : 598106

Geobacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54294.1\|597131_598106_-	site-specific DNA-methyltransferase	A0A0H3UZ66	Geobacillus_virus	1.4e-17	28.6

DBSCAN-SWA_34

601320 : 605432

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54296.1\|601320_601635_-	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	3.6e-15	38.3
AUI54297.1\|601712_605432_-	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	1.3e-172	32.3

DBSCAN-SWA_35

623259 : 625884

environmental_Halophage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54309.1\|623259_624603_+	purine permease	H9YQ34	environmental_Halophage	7.5e-25	48.8
AUI55407.1\|624945_625884_+\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	2.5e-19	29.2

DBSCAN-SWA_36

629043 : 633371

Pseudomonas_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54314.1\|629043_630525_-	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	2.4e-69	37.8
AUI54315.1\|630558_631311_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
AUI54316.1\|631320_632070_-	exodeoxyribonuclease III	E3T4M6	Cafeteria_roenbergensis_virus	2.8e-61	47.7
AUI54317.1\|632126_632744_-	DUF4840 domain-containing protein	NA	NA	NA	NA
AUI54318.1\|632777_633371_-	GTP cyclohydrolase I FolE	S4VV34	Pandoravirus	6.4e-45	51.3

DBSCAN-SWA_37

640532 : 655649

Mycobacterium_phage(25.0%)

integrase,tRNA

attL 632096:632111|attR 666381:666396

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
632096:632111	attL	NA	NA	NA	NA
AUI54324.1\|640532_641957_+\|tRNA	tRNA nucleotidyltransferase	A0A2I2MPB1	Mycobacterium_phage	1.7e-27	36.9
AUI54325.1\|642155_643490_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AUI54326.1\|643572_646836_+	AcrB/AcrD/AcrF family protein	S5VTK5	Leptospira_phage	2.8e-57	21.8
AUI54327.1\|646857_648237_+	multidrug transporter	NA	NA	NA	NA
AUI54328.1\|648268_649051_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AUI54329.1\|649785_651015_+\|integrase	integrase	H7BUI8	unidentified_phage	1.1e-27	34.0
AUI54330.1\|651079_652375_+\|integrase	integrase	NA	NA	NA	NA
AUI54331.1\|652371_652788_+	hypothetical protein	NA	NA	NA	NA
AUI54332.1\|652962_653442_-	HlyD family secretion protein	NA	NA	NA	NA
AUI54333.1\|653459_655649_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.6e-39	28.5
666381:666396	attR	NA	NA	NA	NA

DBSCAN-SWA_38

661215 : 662088

Cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54338.1\|661215_662088_-	ABC transporter ATP-binding protein	A0A2R8FFL6	Cedratvirus	1.0e-14	28.8

DBSCAN-SWA_39

669681 : 671046

Lactococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54344.1\|669681_671046_+	virulence protein	D3W0G0	Lactococcus_phage	7.1e-15	31.3

DBSCAN-SWA_40

678326 : 679568

Bodo_saltans_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54352.1\|678326_679568_-	DUF1810 domain-containing protein	A0A2H4UVK5	Bodo_saltans_virus	1.8e-12	42.6

DBSCAN-SWA_41

713533 : 715724

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54375.1\|713533_714490_+	SPFH/Band 7/PHB domain protein	A0A1V0SB59	Catovirus	6.3e-18	28.9
AUI54376.1\|714599_715724_+	UDP-N-acetyl glucosamine 2-epimerase	A0A1V0SJE0	Klosneuvirus	9.9e-31	28.0

DBSCAN-SWA_42

719195 : 721115

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54380.1\|719195_721115_+	ATPase P	A0A218MNH6	uncultured_virus	1.6e-81	31.9

DBSCAN-SWA_43

731667 : 732927

Acanthocystis_turfacea_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54389.1\|731667_732927_+	nucleotide sugar dehydrogenase	M1IB49	Acanthocystis_turfacea_Chlorella_virus	9.2e-102	48.8

DBSCAN-SWA_44

773298 : 774561

unidentified_phage(100.0%)

integrase

attL 760653:760668|attR 783957:783972

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
760653:760668	attL	NA	NA	NA	NA
AUI54404.1\|773298_774561_-\|integrase	integrase	H7BUI8	unidentified_phage	1.2e-24	34.6
AUI54404.1\|773298_774561_-\|integrase	integrase	H7BUI8	unidentified_phage	1.2e-24	34.6
783957:783972	attR	NA	NA	NA	NA

DBSCAN-SWA_45

780853 : 782329

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55417.1\|780853_782329_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.1e-26	28.3

DBSCAN-SWA_46

786486 : 787575

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54410.1\|786486_787575_+	chorismate synthase	A0A291AU41	Pandoravirus	4.8e-91	51.0

DBSCAN-SWA_47

792322 : 792997

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54416.1\|792322_792997_-	methyltransferase	G3MA03	Bacillus_virus	1.1e-19	46.5

DBSCAN-SWA_48

813542 : 815564

Clostridium_botulinum_C_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54430.1\|813542_815564_-	NAD-dependent DNA ligase LigA	Q332J4	Clostridium_botulinum_C_phage	8.1e-116	38.6

DBSCAN-SWA_49

827535 : 838959

Noumeavirus(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54438.1\|827535_829068_-	ATP-dependent endonuclease	A0A1Q1PMX7	Noumeavirus	5.5e-08	20.1
AUI54439.1\|829090_829975_-	DNA/RNA non-specific endonuclease	A0A2H4N7Z3	Lake_Baikal_phage	1.9e-29	35.4
AUI54440.1\|830289_830499_+	hypothetical protein	NA	NA	NA	NA
AUI54441.1\|830654_831476_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-14	28.8
AUI54442.1\|831495_832224_+	hypothetical protein	NA	NA	NA	NA
AUI54443.1\|832244_833033_+	hypothetical protein	NA	NA	NA	NA
AUI54444.1\|833060_833420_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUI54445.1\|833597_837623_-	ATP-dependent helicase	A0A160DHD3	Gordonia_phage	1.5e-44	29.1
AUI54446.1\|837939_838959_-	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	3.1e-116	65.5

DBSCAN-SWA_50

851169 : 860757

Streptococcus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54455.1\|851169_852594_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	E4ZFI6	Streptococcus_phage	8.1e-54	31.2
AUI54456.1\|852797_855524_+	pyruvate, phosphate dikinase	H8YJB7	Vibrio_phage	6.2e-87	39.3
AUI54457.1\|856755_859344_-	ATP-dependent chaperone ClpB	A0A223W0B1	Agrobacterium_phage	4.2e-125	34.1
AUI54458.1\|859809_860757_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.6e-18	27.0

DBSCAN-SWA_51

878625 : 879579

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54472.1\|878625_879579_+	glycosyltransferase	M1FQW5	Enterobacteria_phage	2.0e-24	28.8

DBSCAN-SWA_52

883546 : 886266

Indivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54476.1\|883546_885631_+	peptidase M3	A0A1V0SD92	Indivirus	3.7e-39	22.9
AUI54477.1\|885762_886266_+	cytidine deaminase	H6WFU3	Cyanophage	1.6e-33	50.8

DBSCAN-SWA_53

895386 : 897113

Tetraselmis_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54486.1\|895386_896358_-	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	2.3e-39	35.7
AUI54487.1\|896354_897113_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	6.4e-58	49.4

DBSCAN-SWA_54

922944 : 926235

Rhizobium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54507.1\|922944_924069_+	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	3.2e-29	26.7
AUI54508.1\|924164_925019_+	3'-5' exonuclease	A0A1P8VWC8	Flavobacterium_phage	2.2e-38	39.5
AUI54509.1\|925023_926235_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.7e-36	31.6

DBSCAN-SWA_55

954265 : 961582

Brevibacillus_phage(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54525.1\|954265_955690_+\|protease	serine protease	A0A0K2CNJ2	Brevibacillus_phage	4.4e-07	34.6
AUI54526.1\|955714_957019_+	exodeoxyribonuclease VII large subunit	A0A2P1EMK6	Moumouvirus	4.7e-16	38.7
AUI54527.1\|957060_957249_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
AUI54528.1\|957346_958390_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA
AUI54529.1\|958670_959156_+	ferritin	NA	NA	NA	NA
AUI54530.1\|959268_959808_-	hypothetical protein	NA	NA	NA	NA
AUI54531.1\|959812_961582_-	hypothetical protein	H7BUJ6	unidentified_phage	1.2e-83	41.3

DBSCAN-SWA_56

968637 : 973248

uncultured_Mediterranean_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55426.1\|968637_969858_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	4.4e-24	31.4
AUI55427.1\|970341_970551_+	hypothetical protein	NA	NA	NA	NA
AUI54537.1\|970674_972216_+	phosphotransferase	NA	NA	NA	NA
AUI54538.1\|972372_972729_-	MarR family transcriptional regulator	NA	NA	NA	NA
AUI54539.1\|972738_973248_-	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	8.8e-11	32.2

DBSCAN-SWA_57

982818 : 984738

Megavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54548.1\|982818_984738_+	polysaccharide biosynthesis protein	K7Y9E1	Megavirus	6.0e-28	30.7

DBSCAN-SWA_58

1005927 : 1008662

Tupanvirus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54567.1\|1005927_1007286_-\|tRNA	histidine--tRNA ligase	A0A2K9L0H9	Tupanvirus	4.5e-46	32.7
AUI54568.1\|1007387_1008662_-	adenylosuccinate synthase	A0A0B5J049	Pandoravirus	6.6e-55	31.0

DBSCAN-SWA_59

1019036 : 1020038

Acanthocystis_turfacea_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54578.1\|1019036_1020038_-	2-hydroxyacid dehydrogenase	M1HUW8	Acanthocystis_turfacea_Chlorella_virus	3.8e-58	42.8

DBSCAN-SWA_60

1035500 : 1037369

Aureococcus_anophage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54592.1\|1035500_1037369_-	DNA topoisomerase III	A0A076FM50	Aureococcus_anophage	5.2e-16	24.9

DBSCAN-SWA_61

1040401 : 1048961

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54596.1\|1040401_1041709_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	5.7e-155	67.1
AUI54597.1\|1042578_1043997_-	hypothetical protein	NA	NA	NA	NA
AUI54598.1\|1044158_1045208_-	glycerate kinase	W6LM47	Streptococcus_phage	6.2e-27	35.7
AUI54599.1\|1045303_1047082_+	signal peptide peptidase SppA	NA	NA	NA	NA
AUI54600.1\|1047088_1048267_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AUI54601.1\|1048151_1048961_+	purine-nucleoside phosphorylase	Q5YBA4	Grouper_iridovirus	3.1e-58	41.8

DBSCAN-SWA_62

1053393 : 1055553

Cronobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54605.1\|1053393_1055553_+	anaerobic ribonucleoside-triphosphate reductase	A0A060AN10	Cronobacter_phage	9.1e-182	52.0

DBSCAN-SWA_63

1067592 : 1072873

Aeromonas_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54616.1\|1067592_1068873_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.1e-91	48.4
AUI54617.1\|1069312_1070614_-	peptidase M64	NA	NA	NA	NA
AUI54618.1\|1071211_1072873_-\|transposase	IS5/IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	8.8e-60	32.5

DBSCAN-SWA_64

1078560 : 1082457

Enterobacteria_phage(50.0%)

capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54626.1\|1078560_1079451_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	6.1e-108	64.6
AUI54627.1\|1079484_1081998_+\|capsid	capsid assembly protein	NA	NA	NA	NA
AUI54628.1\|1082031_1082457_+	hypothetical protein	A0A1W6DYI0	Aeromonas_phage	3.4e-16	44.4

DBSCAN-SWA_65

1107161 : 1120215

Pseudoalteromonas_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54645.1\|1107161_1107569_-	single-stranded DNA-binding protein	S5M9Z7	Pseudoalteromonas_phage	8.6e-17	42.6
AUI54646.1\|1107599_1108139_-	hypothetical protein	NA	NA	NA	NA
AUI54647.1\|1110189_1111380_-	8-amino-7-oxononanoate synthase	V5LQ39	Emiliania_huxleyi_virus	4.7e-47	33.4
AUI54648.1\|1111575_1112607_+	diacylglycerol kinase	A0A1V0SBJ0	Catovirus	2.2e-08	24.2
AUI54649.1\|1112626_1113337_+	methyltransferase	NA	NA	NA	NA
AUI54650.1\|1113611_1116077_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	7.2e-151	40.3
AUI54651.1\|1116076_1117204_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	4.6e-76	42.3
AUI54652.1\|1117215_1118433_+	YjgP/YjgQ family permease	NA	NA	NA	NA
AUI54653.1\|1118493_1120215_+	ATP-dependent helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.6e-54	32.4

DBSCAN-SWA_66

1131418 : 1138555

uncultured_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54660.1\|1131418_1132885_+	deoxyribonuclease HsdR	A0A1B1IRD3	uncultured_Mediterranean_phage	5.1e-11	31.1
AUI54661.1\|1133167_1134031_+	RNA polymerase subunit sigma	G8CLC7	Synechococcus_phage	1.1e-29	29.7
AUI54662.1\|1134061_1134562_+	hypothetical protein	NA	NA	NA	NA
AUI54663.1\|1134548_1135436_+	hypothetical protein	NA	NA	NA	NA
AUI54664.1\|1135511_1135997_+	peptidase S41	NA	NA	NA	NA
AUI54665.1\|1136039_1136444_+	pyrroloquinoline quinone biosynthesis protein PqqD	NA	NA	NA	NA
AUI54666.1\|1136556_1138182_-	chaperonin GroEL	A0A219YK78	uncultured_virus	1.2e-183	61.9
AUI54667.1\|1138285_1138555_-	co-chaperone GroES	A0A221S4G8	uncultured_virus	2.9e-13	48.4

DBSCAN-SWA_67

1148686 : 1153608

uncultured_Mediterranean_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54678.1\|1148686_1151560_+	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	4.9e-215	43.2
AUI54679.1\|1152078_1153608_-	MFS transporter	A0A0P0IY73	Acinetobacter_phage	7.7e-34	26.7

DBSCAN-SWA_68

1157942 : 1160771

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54682.1\|1157942_1160771_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	3.6e-271	50.2

DBSCAN-SWA_69

1168380 : 1173538

Halovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54688.1\|1168380_1169457_-	carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit	R4TGJ8	Halovirus	1.9e-47	33.7
AUI54689.1\|1169607_1171509_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	7.1e-13	22.6
AUI54690.1\|1171690_1173538_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1HVL7	Paramecium_bursaria_Chlorella_virus	2.3e-109	39.1

DBSCAN-SWA_70

1180432 : 1181386

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54696.1\|1180432_1181386_-	N-acetylmuramoyl-L-alanine amidase	A0A0A7RUS8	Clostridium_phage	1.7e-23	40.3

DBSCAN-SWA_71

1192141 : 1193682

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54706.1\|1192141_1193089_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.8e-09	38.5
AUI54707.1\|1193085_1193682_-	serine acetyltransferase	A0A1L2JYI5	Streptococcus_phage	1.4e-15	30.4

DBSCAN-SWA_72

1198007 : 1199279

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54712.1\|1198007_1199279_-	nucleotide sugar dehydrogenase	M1HWZ1	Paramecium_bursaria_Chlorella_virus	2.1e-24	27.6

DBSCAN-SWA_73

1215981 : 1222015

Pandoravirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54729.1\|1215981_1216551_-	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	6.0e-08	26.9
AUI54730.1\|1216982_1217984_-	glucokinase	NA	NA	NA	NA
AUI54731.1\|1218114_1218807_+	lysine transporter LysE	NA	NA	NA	NA
AUI54732.1\|1218809_1219418_+	DUF4924 domain-containing protein	NA	NA	NA	NA
AUI54733.1\|1219430_1220318_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.2e-36	37.3
AUI54734.1\|1220446_1222015_+	peptide chain release factor 3	A0A2K5B2A5	Erysipelothrix_phage	1.0e-33	26.7

DBSCAN-SWA_74

1227309 : 1227879

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54740.1\|1227309_1227879_+	type 1 glutamine amidotransferase	A0A0P0IKJ1	Acinetobacter_phage	5.4e-41	44.5

DBSCAN-SWA_75

1262123 : 1264945

unidentified_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54764.1\|1262123_1263071_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.6e-18	27.0
AUI54765.1\|1263218_1264304_+	hypothetical protein	NA	NA	NA	NA
AUI54766.1\|1264348_1264945_+	hypothetical protein	A0A2H4JFP5	uncultured_Caudovirales_phage	1.5e-06	46.8

DBSCAN-SWA_76

1312661 : 1316382

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54797.1\|1312661_1314386_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	2.7e-75	30.1
AUI54798.1\|1314489_1316382_+	RecQ family ATP-dependent DNA helicase	A0A2K9L3P7	Tupanvirus	1.8e-64	41.1

DBSCAN-SWA_77

1322898 : 1323783

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54806.1\|1322898_1323783_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	5.8e-26	31.6

DBSCAN-SWA_78

1357616 : 1359360

Cafeteria_roenbergensis_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54828.1\|1357616_1358435_+	molecular chaperone DjlA	E3T4P7	Cafeteria_roenbergensis_virus	2.3e-05	46.2
AUI54829.1\|1358613_1359360_+	peptidylprolyl isomerase	A0A1V0S9I2	Catovirus	4.8e-05	25.3

DBSCAN-SWA_79

1364214 : 1366623

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54833.1\|1364214_1365099_+	acyltransferase	M1H5W0	Paramecium_bursaria_Chlorella_virus	1.6e-55	39.1
AUI54834.1\|1365585_1366623_-	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	1.5e-52	38.5

DBSCAN-SWA_80

1383610 : 1385422

Streptococcus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54846.1\|1383610_1385422_-	DNA polymerase III, subunit gamma and tau	A0A1U9WR94	Streptococcus_virus	7.9e-46	34.3

DBSCAN-SWA_81

1391894 : 1392641

Sulfolobus_monocaudavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54852.1\|1391894_1392641_+	polyprenol monophosphomannose synthase	A0A0N7A8R9	Sulfolobus_monocaudavirus	3.3e-30	37.7

DBSCAN-SWA_82

1409315 : 1409771

Pneumococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54864.1\|1409315_1409771_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.2e-48	71.4

DBSCAN-SWA_83

1439668 : 1441405

Klosneuvirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54893.1\|1439668_1441405_-\|tRNA	lysine--tRNA ligase	A0A1V0SIS0	Klosneuvirus	1.3e-90	38.7

DBSCAN-SWA_84

1454870 : 1461906

Ostreococcus_lucimarinus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54906.1\|1454870_1456901_+	cell division protein FtsH	M4QNJ1	Ostreococcus_lucimarinus_virus	2.0e-98	45.6
AUI54907.1\|1456915_1457788_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
AUI54908.1\|1457869_1458517_+	transcription elongation protein SprT	NA	NA	NA	NA
AUI54909.1\|1458738_1461906_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	8.7e-141	32.6

DBSCAN-SWA_85

1493290 : 1494553

unidentified_phage(100.0%)

integrase

attL 1488195:1488208|attR 1498675:1498688

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1488195:1488208	attL	NA	NA	NA	NA
AUI54924.1\|1493290_1494553_-\|integrase	integrase	H7BUI8	unidentified_phage	5.9e-24	34.1
AUI54924.1\|1493290_1494553_-\|integrase	integrase	H7BUI8	unidentified_phage	5.9e-24	34.1
1498675:1498688	attR	NA	NA	NA	NA

DBSCAN-SWA_86

1505533 : 1524793

uncultured_Mediterranean_phage(22.22%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54932.1\|1505533_1508200_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	6.3e-84	36.5
AUI54933.1\|1508428_1509628_-	lipid-A-disaccharide synthase	NA	NA	NA	NA
AUI54934.1\|1509640_1510414_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	8.6e-26	30.1
AUI54935.1\|1510528_1511296_+	ParA family protein	Q8JL10	Natrialba_phage	6.8e-23	29.6
AUI54936.1\|1511506_1512412_+	chromosome partitioning protein ParB	S5VSZ7	Leptospira_phage	5.8e-13	35.5
AUI54937.1\|1512582_1513362_+	hypothetical protein	NA	NA	NA	NA
AUI54938.1\|1513402_1514539_+	murein transglycosylase	A0A218M4G6	Pasteurella_phage	3.1e-16	46.6
AUI54939.1\|1514579_1516874_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	7.3e-12	37.2
AUI54940.1\|1517147_1517732_+	hypothetical protein	NA	NA	NA	NA
AUI54941.1\|1517821_1518253_+	hypothetical protein	NA	NA	NA	NA
AUI55451.1\|1519739_1520678_+\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	2.5e-19	29.2
AUI54942.1\|1520921_1521119_-	hypothetical protein	NA	NA	NA	NA
AUI54943.1\|1521426_1522095_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.0e-19	29.4
AUI54944.1\|1522091_1523006_-	beta-carotene 15,15'-monooxygenase	NA	NA	NA	NA
AUI55452.1\|1523884_1524793_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	7.6e-05	26.3

DBSCAN-SWA_87

1532144 : 1534967

Bodo_saltans_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54949.1\|1532144_1534967_+	insulinase family protein	A0A2H4UVM3	Bodo_saltans_virus	8.6e-07	24.1

DBSCAN-SWA_88

1543711 : 1544779

White_spot_syndrome_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54955.1\|1543711_1544779_+	Fic family protein	K7WHW6	White_spot_syndrome_virus	1.1e-05	32.6

DBSCAN-SWA_89

1555716 : 1557672

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54964.1\|1555716_1557672_-	DNA primase	A0A218MKR7	uncultured_virus	1.4e-40	32.0

DBSCAN-SWA_90

1566963 : 1573178

Leptospira_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54973.1\|1566963_1570296_-	helicase	Q6NDX2	Leptospira_phage	6.8e-11	26.3
AUI54974.1\|1570382_1571555_-	restriction endonuclease subunit S	A0A1V0SKS6	Klosneuvirus	4.7e-15	32.7
AUI54975.1\|1571666_1573178_-	restriction endonuclease subunit M	J7I0U9	Acinetobacter_phage	4.0e-35	33.5

DBSCAN-SWA_91

1591671 : 1592619

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54986.1\|1591671_1592619_-	cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	3.5e-85	55.0

DBSCAN-SWA_92

1602966 : 1604205

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54993.1\|1602966_1604205_-	helicase	F8UBM0	Clostridium_phage	3.4e-08	27.1

DBSCAN-SWA_93

1610412 : 1618954

uncultured_Mediterranean_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI54996.1\|1610412_1616496_+	hypothetical protein	A0A1B1IUF6	uncultured_Mediterranean_phage	5.7e-40	22.2
AUI54997.1\|1617685_1617913_+	hypothetical protein	NA	NA	NA	NA
AUI54998.1\|1618051_1618954_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.6e-34	40.5

DBSCAN-SWA_94

1625376 : 1627599

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55001.1\|1625376_1627599_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.1e-33	28.3

DBSCAN-SWA_95

1636196 : 1696782

unidentified_phage(20.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55005.1\|1636196_1638923_-	DNA topoisomerase IV	A0A172JHV7	Bacillus_phage	8.3e-39	28.9
AUI55006.1\|1639263_1640811_+\|tRNA	glycine--tRNA ligase	A0A2I2L3K8	Orpheovirus	1.8e-43	30.5
AUI55007.1\|1640924_1641605_+	peptidylprolyl isomerase	NA	NA	NA	NA
AUI55008.1\|1641836_1643258_+	MATE family efflux transporter	NA	NA	NA	NA
AUI55009.1\|1643694_1644777_+	OmpA family protein	NA	NA	NA	NA
AUI55010.1\|1645316_1647239_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
AUI55011.1\|1647299_1648640_+	Trk system potassium transporter TrkA	NA	NA	NA	NA
AUI55012.1\|1648642_1650100_+	potassium transporter	NA	NA	NA	NA
AUI55461.1\|1650564_1651185_+	DUF4840 domain-containing protein	NA	NA	NA	NA
AUI55013.1\|1651468_1653373_+	molecular chaperone DnaK	J3IZ77	Acanthamoeba_polyphaga_lentillevirus	5.8e-140	48.4
AUI55014.1\|1654466_1655297_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AUI55015.1\|1655323_1655782_+	hypothetical protein	NA	NA	NA	NA
AUI55462.1\|1656007_1656277_+	hypothetical protein	NA	NA	NA	NA
AUI55016.1\|1656383_1657280_-	TIGR02391 family protein	NA	NA	NA	NA
AUI55017.1\|1657538_1657811_+	hypothetical protein	NA	NA	NA	NA
AUI55463.1\|1657909_1658140_+	XRE family transcriptional regulator	NA	NA	NA	NA
AUI55018.1\|1658136_1662432_+	ATP-binding protein	NA	NA	NA	NA
AUI55019.1\|1667003_1667951_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.1e-18	27.0
AUI55020.1\|1668098_1668338_+	hypothetical protein	NA	NA	NA	NA
AUI55021.1\|1668334_1668793_+	hypothetical protein	NA	NA	NA	NA
AUI55022.1\|1669006_1670779_-	hypothetical protein	NA	NA	NA	NA
AUI55464.1\|1671868_1672630_-\|protease	serine protease	A0A1B1IT49	uncultured_Mediterranean_phage	3.7e-05	34.7
AUI55023.1\|1672638_1673259_-	hypothetical protein	NA	NA	NA	NA
AUI55024.1\|1673271_1674888_-	hypothetical protein	NA	NA	NA	NA
AUI55025.1\|1674901_1675669_-	hypothetical protein	NA	NA	NA	NA
AUI55026.1\|1675671_1679046_-	hypothetical protein	NA	NA	NA	NA
AUI55027.1\|1679058_1680486_-	hypothetical protein	NA	NA	NA	NA
AUI55028.1\|1680501_1680963_-	hypothetical protein	NA	NA	NA	NA
AUI55029.1\|1680967_1682020_-	hypothetical protein	NA	NA	NA	NA
AUI55465.1\|1682148_1683795_-\|transposase	IS5/IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	1.5e-59	32.3
AUI55030.1\|1683922_1684861_+\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	2.5e-19	29.2
AUI55031.1\|1685663_1686146_+	phosphohydrolase	A0A141E1X8	Streptococcus_phage	4.1e-18	38.1
AUI55032.1\|1686179_1687994_+	DUF262 domain-containing protein	NA	NA	NA	NA
AUI55033.1\|1688377_1689247_-\|transposase	DDE transposase	NA	NA	NA	NA
AUI55034.1\|1689362_1689707_-\|transposase	transposase family protein	NA	NA	NA	NA
AUI55035.1\|1690044_1690560_-	porin family protein	NA	NA	NA	NA
AUI55036.1\|1690976_1691411_-	DNA-binding protein	NA	NA	NA	NA
AUI55037.1\|1692216_1693563_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	7.2e-145	57.2
AUI55038.1\|1693702_1695250_+	rRNA pseudouridine synthase	NA	NA	NA	NA
AUI55039.1\|1695390_1696782_+\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	4.6e-86	38.3

DBSCAN-SWA_96

1703100 : 1705917

Pandoravirus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55046.1\|1703100_1703985_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	S4VW33	Pandoravirus	3.2e-16	35.5
AUI55047.1\|1704252_1705113_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUI55048.1\|1705209_1705917_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-37	40.6

DBSCAN-SWA_97

1715620 : 1716568

unidentified_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55055.1\|1715620_1716568_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.1e-18	27.0

DBSCAN-SWA_98

1719796 : 1721686

Wolbachia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55059.1\|1719796_1721686_-	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	2.7e-57	28.7

DBSCAN-SWA_99

1726903 : 1738238

Klosneuvirus(20.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55064.1\|1726903_1728388_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	8.6e-99	43.8
AUI55466.1\|1728719_1729208_+	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
AUI55065.1\|1729501_1729990_+	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
AUI55066.1\|1730256_1730568_-	XRE family transcriptional regulator	NA	NA	NA	NA
AUI55067.1\|1730571_1730922_-	addiction module toxin RelE	NA	NA	NA	NA
AUI55068.1\|1731203_1733387_-	DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	1.1e-86	35.9
AUI55069.1\|1733487_1734726_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.8e-116	53.1
AUI55070.1\|1734735_1735428_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.3e-38	45.4
AUI55071.1\|1735606_1736971_-	trigger factor	NA	NA	NA	NA
AUI55072.1\|1737410_1738238_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-17	26.2

DBSCAN-SWA_100

1755552 : 1762393

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55083.1\|1755552_1757226_-	acetyl-CoA synthetase	A0A2H4PQU7	Staphylococcus_phage	1.3e-55	31.2
AUI55084.1\|1757359_1757914_-	XRE family transcriptional regulator	NA	NA	NA	NA
AUI55085.1\|1758557_1759034_-	arginine repressor	NA	NA	NA	NA
AUI55468.1\|1759377_1760115_-	pyruvate formate-lyase 1-activating enzyme	NA	NA	NA	NA
AUI55086.1\|1760146_1762393_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	7.3e-166	41.3

DBSCAN-SWA_101

1766582 : 1767683

Bodo_saltans_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55090.1\|1766582_1767683_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	9.8e-07	29.6

DBSCAN-SWA_102

1780723 : 1782649

Clostridioides_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55103.1\|1780723_1780924_+	transcriptional regulator	A0A1V0E021	Clostridioides_phage	1.3e-05	40.0
AUI55104.1\|1781095_1782649_-	alkyl hydroperoxide reductase subunit F	A0A249XZT7	Enterococcus_phage	3.5e-34	31.2

DBSCAN-SWA_103

1790306 : 1791494

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55110.1\|1790306_1791494_-	glycine C-acetyltransferase	V5LQ39	Emiliania_huxleyi_virus	1.4e-35	28.9

DBSCAN-SWA_104

1797139 : 1799017

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55115.1\|1797139_1799017_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	4.1e-106	36.9

DBSCAN-SWA_105

1805224 : 1809135

Aeromonas_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55120.1\|1805224_1805722_-	CYTH domain-containing protein	Q76Z87	Aeromonas_virus	9.8e-07	33.8
AUI55121.1\|1805996_1807112_-	peptide chain release factor 2	NA	NA	NA	NA
AUI55122.1\|1807326_1809135_-	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	1.6e-38	22.2

DBSCAN-SWA_106

1814617 : 1817848

Tunisvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55126.1\|1814617_1815055_-	dUTP diphosphatase	V9SFR6	Tunisvirus	7.5e-43	58.3
AUI55127.1\|1815303_1816641_+	dehydrogenase	NA	NA	NA	NA
AUI55128.1\|1816852_1817848_+	esterase	A0A2C9CY00	Yersinia_phage	1.0e-07	27.8

DBSCAN-SWA_107

1821899 : 1823720

Klosneuvirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55130.1\|1821899_1823720_+\|tRNA	arginine--tRNA ligase	A0A1V0SIS8	Klosneuvirus	1.0e-29	23.1

DBSCAN-SWA_108

1828619 : 1831310

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55135.1\|1828619_1829594_+	modification methylase	A0A1S5PRR3	Streptococcus_phage	8.9e-44	37.2
AUI55472.1\|1829610_1830435_+	restriction endonuclease	NA	NA	NA	NA
AUI55136.1\|1830431_1831310_+	site-specific DNA-methyltransferase	H9C0B7	Vibrio_phage	8.3e-17	30.8

DBSCAN-SWA_109

1836129 : 1837695

Tetraselmis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55138.1\|1836129_1837695_+	sulfatase	A0A2P0VMN7	Tetraselmis_virus	1.3e-17	24.1

DBSCAN-SWA_110

1845858 : 1846491

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55146.1\|1845858_1846491_-	orotate phosphoribosyltransferase	Q58MW1	Prochlorococcus_phage	6.0e-09	28.9

DBSCAN-SWA_111

1859760 : 1864972

Indivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55154.1\|1859760_1860903_+	riboflavin biosynthesis protein RibD	A0A1V0SE20	Indivirus	4.7e-28	28.0
AUI55155.1\|1861068_1862358_-	serine dehydratase subunit alpha family protein	NA	NA	NA	NA
AUI55156.1\|1862432_1862846_-	hypothetical protein	NA	NA	NA	NA
AUI55157.1\|1863001_1864972_-	helicase	A0A076FFX0	Aureococcus_anophage	1.9e-13	23.6

DBSCAN-SWA_112

1872128 : 1872932

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55164.1\|1872128_1872932_+	ADP-ribosylglycohydrolase	A0A2P1EM87	Moumouvirus	3.1e-10	24.9

DBSCAN-SWA_113

1877407 : 1879873

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55168.1\|1877407_1879873_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	4.6e-12	35.0

DBSCAN-SWA_114

1891417 : 1895612

Acanthocystis_turfacea_Chlorella_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55176.1\|1891417_1893406_-	potassium transporter Kup	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	1.1e-64	34.1
AUI55177.1\|1893548_1895612_+\|tRNA	methionine--tRNA ligase	K7Y9Y6	Megavirus	3.1e-78	33.8

DBSCAN-SWA_115

1904139 : 1904850

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55186.1\|1904139_1904850_-	ABC transporter ATP-binding protein	A0A1B0RXA0	Streptococcus_phage	4.1e-06	31.7

DBSCAN-SWA_116

1907962 : 1913842

uncultured_Mediterranean_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55189.1\|1907962_1910983_-	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	4.7e-27	42.8
AUI55478.1\|1911088_1912189_-	AP endonuclease	NA	NA	NA	NA
AUI55190.1\|1912394_1913351_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
AUI55191.1\|1913566_1913842_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	9.9e-17	57.3

DBSCAN-SWA_117

1919633 : 1924927

Staphylococcus_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55195.1\|1919633_1920926_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.3e-102	48.7
AUI55196.1\|1920932_1921865_+	DUF4271 domain-containing protein	NA	NA	NA	NA
AUI55197.1\|1921871_1922627_+	uroporphyrinogen-III synthase	NA	NA	NA	NA
AUI55198.1\|1922710_1923166_+	ribonuclease P protein component	NA	NA	NA	NA
AUI55479.1\|1923277_1923523_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	6.7e-17	60.6
AUI55199.1\|1923628_1924927_+\|tRNA	tyrosine--tRNA ligase	A0A1L2CUL7	Pectobacterium_phage	5.1e-71	38.8

DBSCAN-SWA_118

1929060 : 1932934

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55202.1\|1929060_1931877_-	insulinase family protein	A0A2K9L1M6	Tupanvirus	3.1e-12	29.4
AUI55203.1\|1931989_1932934_-	tyrosine recombinase XerD	A0A1I9SC88	Mycobacterium_phage	3.3e-19	29.1

DBSCAN-SWA_119

1936337 : 1937333

Wolbachia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55208.1\|1936337_1937333_+	cytochrome C biogenesis protein CycH	Q9JMN3	Wolbachia_phage	4.1e-20	39.4

DBSCAN-SWA_120

1972046 : 1979250

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55231.1\|1972046_1973660_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	1.1e-118	46.5
AUI55232.1\|1975020_1975890_-	DNA-binding protein	Q4ZC41	Staphylococcus_virus	1.0e-75	53.8
AUI55233.1\|1976322_1977684_+	exo-alpha-sialidase	NA	NA	NA	NA
AUI55234.1\|1977706_1978399_+	porin family protein	NA	NA	NA	NA
AUI55235.1\|1978497_1979250_+	isoprenyl transferase	R9W0U9	Flavobacterium_phage	4.8e-21	41.9

DBSCAN-SWA_121

1988025 : 1989513

Catovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55244.1\|1988025_1989513_+\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	2.6e-47	28.6

DBSCAN-SWA_122

2003572 : 2086479

Bacillus_phage(21.43%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55255.1\|2003572_2004463_-\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	9.0e-43	34.8
AUI55256.1\|2004481_2004712_+	hypothetical protein	NA	NA	NA	NA
AUI55485.1\|2004818_2005757_+\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	2.5e-19	29.2
AUI55257.1\|2006093_2007557_+	hypothetical protein	NA	NA	NA	NA
AUI55258.1\|2007570_2008260_+	HEAT repeat domain-containing protein	NA	NA	NA	NA
AUI55259.1\|2008256_2008583_+	hypothetical protein	NA	NA	NA	NA
AUI55260.1\|2008899_2009289_+	DNA-entry nuclease	F8WPS9	Bacillus_phage	2.0e-23	52.2
AUI55261.1\|2009291_2009837_+	hypothetical protein	NA	NA	NA	NA
AUI55262.1\|2009969_2010788_+	hypothetical protein	F8WPS9	Bacillus_phage	3.1e-26	57.7
AUI55263.1\|2010793_2011360_+	hypothetical protein	NA	NA	NA	NA
AUI55264.1\|2011502_2011901_+	type VI secretion system needle protein Hcp	NA	NA	NA	NA
AUI55265.1\|2012083_2013934_+	type IV secretion protein Rhs	NA	NA	NA	NA
AUI55266.1\|2013937_2014729_+	hypothetical protein	NA	NA	NA	NA
AUI55267.1\|2014735_2017831_+	hypothetical protein	A0A0X8WP64	Ralstonia_phage	1.1e-10	30.0
AUI55486.1\|2017922_2019089_+	hypothetical protein	NA	NA	NA	NA
AUI55268.1\|2019343_2021323_+	hypothetical protein	A0A0F6R8M1	Escherichia_coli_O157_typing_phage	6.1e-07	36.0
AUI55487.1\|2021298_2021583_+	hypothetical protein	NA	NA	NA	NA
AUI55269.1\|2021584_2022814_+	hypothetical protein	NA	NA	NA	NA
AUI55488.1\|2023961_2024759_+	hypothetical protein	NA	NA	NA	NA
AUI55270.1\|2027609_2028449_+	hypothetical protein	NA	NA	NA	NA
AUI55271.1\|2029137_2030358_+	SH3 domain-containing protein	NA	NA	NA	NA
AUI55489.1\|2032060_2032453_+	hypothetical protein	D6QWN7	uncultured_phage	1.3e-06	33.3
AUI55272.1\|2032455_2033496_+	hypothetical protein	NA	NA	NA	NA
AUI55273.1\|2033704_2035000_-\|transposase	transposase	NA	NA	NA	NA
AUI55274.1\|2034943_2035174_+	hypothetical protein	NA	NA	NA	NA
AUI55275.1\|2035154_2036984_-	SAM-dependent methyltransferase	A0A1C9C5K0	Heterosigma_akashiwo_virus	2.9e-19	25.7
AUI55276.1\|2037059_2037602_-	HNH endonuclease	NA	NA	NA	NA
AUI55277.1\|2037603_2038254_-	hypothetical protein	NA	NA	NA	NA
AUI55278.1\|2038243_2040823_-	ATP-binding protein	NA	NA	NA	NA
AUI55279.1\|2040914_2041382_-	hypothetical protein	NA	NA	NA	NA
AUI55280.1\|2043532_2044114_+	hypothetical protein	NA	NA	NA	NA
AUI55281.1\|2044244_2045192_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.1e-18	27.0
AUI55282.1\|2046016_2046253_+	acyl carrier protein	NA	NA	NA	NA
AUI55490.1\|2046341_2047604_+	beta-ketoacyl-[acyl-carrier-protein] synthase II	NA	NA	NA	NA
AUI55283.1\|2047593_2048658_+	ribonuclease III	A0A1C9C5A7	Heterosigma_akashiwo_virus	3.0e-21	33.7
AUI55284.1\|2048998_2050597_-	hypothetical protein	NA	NA	NA	NA
AUI55285.1\|2050771_2053675_-	sugar-binding protein	NA	NA	NA	NA
AUI55286.1\|2054865_2055372_+	DUF5004 domain-containing protein	NA	NA	NA	NA
AUI55287.1\|2055509_2056730_+	hypothetical protein	NA	NA	NA	NA
AUI55288.1\|2056789_2059726_+	TonB-dependent receptor	NA	NA	NA	NA
AUI55289.1\|2059766_2061329_+	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA
AUI55491.1\|2061823_2063056_+	hypothetical protein	NA	NA	NA	NA
AUI55290.1\|2063076_2065098_+	alpha-glucosidase	NA	NA	NA	NA
AUI55291.1\|2065620_2068098_+	TonB-dependent receptor	NA	NA	NA	NA
AUI55292.1\|2068466_2069600_+	ATP-binding protein	NA	NA	NA	NA
AUI55293.1\|2069740_2070709_-	hypothetical protein	NA	NA	NA	NA
AUI55294.1\|2070790_2071780_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AUI55295.1\|2072046_2074344_+	ribonuclease R	Q0GXV6	Lactococcus_phage	5.3e-63	32.0
AUI55296.1\|2074352_2075009_+	hemolysin III	NA	NA	NA	NA
AUI55297.1\|2075036_2075852_+	hypothetical protein	NA	NA	NA	NA
AUI55298.1\|2076014_2077016_+\|protease	cysteine protease	NA	NA	NA	NA
AUI55492.1\|2077120_2077951_-	hypothetical protein	NA	NA	NA	NA
AUI55493.1\|2078891_2079638_+	hypothetical protein	A0A2K9L8X2	Tupanvirus	2.9e-34	42.6
AUI55494.1\|2080272_2080974_-	TrmH family RNA methyltransferase	NA	NA	NA	NA
AUI55299.1\|2081175_2081592_-	Fe-S metabolism protein SufE	NA	NA	NA	NA
AUI55300.1\|2081654_2082899_-\|protease	collagenase-like protease	Q6DW11	Phage_TP	6.1e-21	26.1
AUI55301.1\|2083190_2084519_+\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
AUI55302.1\|2084619_2086479_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.5e-49	31.0

DBSCAN-SWA_123

2098271 : 2104391

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55311.1\|2098271_2099216_-	glycosyltransferase	U5P087	Shigella_phage	7.5e-40	36.5
AUI55312.1\|2099229_2100009_-	polysaccharide deacetylase	NA	NA	NA	NA
AUI55313.1\|2100734_2103254_+	ribonucleoside-diphosphate reductase subunit alpha	A0A127AW21	Bacillus_phage	7.3e-183	44.3
AUI55496.1\|2103344_2104391_+	ribonucleotide-diphosphate reductase subunit beta	A0A127AVZ3	Bacillus_phage	6.8e-58	34.8

DBSCAN-SWA_124

2109162 : 2113228

Klosneuvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55317.1\|2109162_2111823_+	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	1.0e-49	23.6
AUI55318.1\|2111923_2113228_-	Fic family protein	A0A1V0E025	Clostridioides_phage	5.9e-27	33.2

DBSCAN-SWA_125

2122187 : 2123177

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55326.1\|2122187_2123177_-	aminodeoxychorismate synthase component I	S4VNU7	Pandoravirus	7.2e-17	34.6

DBSCAN-SWA_126

2127560 : 2128067

Tetraselmis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55330.1\|2127560_2128067_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	9.0e-24	41.7

DBSCAN-SWA_127

2134555 : 2139352

Staphylococcus_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55335.1\|2134555_2137459_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	1.5e-203	41.0
AUI55336.1\|2137615_2138602_+	YitT family protein	NA	NA	NA	NA
AUI55337.1\|2138770_2139352_+	non-canonical purine NTP diphosphatase	A0A2P1DNP2	Cassava_brown_streak_virus	1.4e-17	33.2

DBSCAN-SWA_128

2149662 : 2152425

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55344.1\|2149662_2152425_-	DNA polymerase I	A0A1B1IST8	uncultured_Mediterranean_phage	1.6e-53	28.2

DBSCAN-SWA_129

2158509 : 2159040

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55349.1\|2158509_2159040_-	adenine phosphoribosyltransferase	A0A2K9L2N8	Tupanvirus	2.8e-15	37.4

DBSCAN-SWA_130

2180623 : 2182054

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55359.1\|2180623_2182054_+	hypothetical protein	A0A2H4JFP5	uncultured_Caudovirales_phage	4.2e-18	29.4

DBSCAN-SWA_131

2185662 : 2187687

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55363.1\|2185662_2187687_+	RHS repeat protein	A0A2H4JFP5	uncultured_Caudovirales_phage	1.7e-17	31.7

DBSCAN-SWA_132

2194127 : 2194619

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55499.1\|2194127_2194619_+	hypothetical protein	O64024	Bacillus_phage	1.1e-34	40.0

DBSCAN-SWA_133

2201042 : 2203755

unidentified_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUI55374.1\|2201042_2201981_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	4.3e-19	26.3
AUI55501.1\|2202108_2203755_+\|transposase	IS5/IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	1.9e-59	32.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP023864

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP023864_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_1

5195-5420

Orphan

Consensus_repeat	Method
CAACAAATTACAAAGTCAGGGACCACCCCCAGGGACCACCCCTAAATATCAAAGATTAGG	PILER-CR
CAGGGACCACCCCAGGGACCACCCCT	CRISPRCasFinder

2 spacers

The CRISPR arrays of CP023864_1

>merge|CP023864|1|5195-5420|PILER-CR,CRISPRCasFinder
CAACAAATTACAAAGTCAGGGACCACCCCCAGGGACCACCCCTAAATATCAAAGATTAGGGGGGTGGTCCCTGACTCGCAAAAACGAGAGACCACCCCCCTGATAATTTCATCTCAGGGACCACCCCAGGGACCACCCCTTCTAAAATAAATAAATATCATAATTTCAACAAATTACAAGGCCAGGGACCACCCCCAGGGACCACCCCTAAATATCAAAGATTAGG

>CP023864|1|1|5195-5420|PILER-CR
CAACAAATTACAAAGTCAGGGACCACCCCCAGGGACCACCCCTAAATATCAAAGATTAGG	GGGGTGGTCCCTGACTCGCAAAAACGAGAGACCACCCCCCTGATAATTTCATC
TCAGGGACCACCCCAGGGACCACCCCTTCTAAAATAAATAAATATCATAATTTCAACAAA	TTACAAGGCCAGGGACCACCCCCAGG
GACCACCCCTAAATATCAAAGATTAGG

>CP023864|1|1|5309-5390|CRISPRCasFinder
CAGGGACCACCCCAGGGACCACCCCT	TCTAAAATAAATAAATATCATAATTTCAAC
AAATTACAAGGCCAGGGACCACCCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI55507.1\|7041_8523_+\|recombinase	unknown	unknown	gnl\|CDD\|366451
CP023864.1\|AUI55506.1\|6142_7012_+\|DDE-transposase	unknown	unknown	gnl\|CDD\|376574
CP023864.1\|AUI55511.1\|10364_10655_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI55509.1\|9542_9740_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI55505.1\|5682_6027_+\|transposase-family-protein	unknown	unknown	gnl\|CDD\|379669
CP023864.1\|AUI55513.1\|11302_11974_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|199908
CP023864.1\|AUI55508.1\|9165_9546_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI55512.1\|10711_11299_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56645.1\|300_663_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|239942
CP023864.1\|AUI55502.1\|2148_3165_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI55510.1\|9741_10212_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI55503.1\|3176_3656_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56646.1\|3668_4373_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI55514.1\|11977_12349_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI55504.1\|4458_4836_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI55507.1\|7041_8523_+\|recombinase	gnl\|CDD\|366451	pfam01076, Mob_Pre, Plasmid recombination enzyme. With some plasmids, recombination can occur in a site specific manner that is independent of RecA. In such cases, the recombination event requires another protein called Pre. Pre is a plasmid recombination enzyme. This protein is also known as Mob (conjugative mobilisation).	1.9642e-10
CP023864.1\|AUI55506.1\|6142_7012_+\|DDE-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	4.21013e-53
CP023864.1\|AUI55505.1\|5682_6027_+\|transposase-family-protein	gnl\|CDD\|379669	pfam14690, zf-ISL3, zinc-finger of transposase IS204/IS1001/IS1096/IS1165.	0.000993701
CP023864.1\|AUI56645.1\|300_663_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|239942	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date oligomerize to bring together four OB folds in their active state. The majority (e.g. Escherichia coli SSB) have a single OB fold per monomer, which oligomerize to form a homotetramer. However, Deinococcus and Thermus SSB proteins have two OB folds per monomer, which oligomerize to form a homodimer. Mycobacterium tuberculosis SSB varies in quaternary structure from E. coli SSB. It forms a dimer of dimers having a unique dimer interface, which lends the protein greater stability. Included in this group are OB folds similar to Escherichia coli PriB. E.coli PriB is homodimeric with each monomer having a single OB fold. It does not appear to form higher order oligomers. PriB is an essential protein for the replication restart at forks that have stalled at sites of DNA damage. It also plays a role in the assembly of primosome during replication initiation at the bacteriophage phiX174 origin. PriB physically interacts with SSB and binds ssDNA with high affinity.	3.25063e-06
CP023864.1\|AUI55513.1\|11302_11974_+\|hypothetical-protein	gnl\|CDD\|199908	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40. Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding.	5.23667e-05

>CP023864.1|AUI55504.1|4458_4836_+|hypothetical-protein
MNSNKKEGIEDGISINKNYHVVIPFELLEFLSVDYSYKNKRRFSRLQAFQNLIEYYSASKSKKEAMAVNIERLSKAWGWSRPSVMKFVMFLESKNILEIFSVVTSKMVRVRNEIIVLRSENAVEK
>CP023864.1|AUI56646.1|3668_4373_+|hypothetical-protein
MLILKLVLFFVLTSIPFLYHFFIKPRRESIKRYRNAFTAVQPQMSKLKKAIWRLGTYLINFYDKMKRREKPRKFFTLLLLLSLLLFQGVDNFASSEVATTYKTMVKENRLNELSISGKKTVAPFMQRKFSNYLYPFLTRPIVYLVSFALTLIFFSYRMANWILTIIHNSKKTLLVLSAIMIFFSIFDEGRYMLFSEVLLIITMAALFYPNFYDSLPPKGRKPIPIYNRKNRVAA
>CP023864.1|AUI55503.1|3176_3656_+|hypothetical-protein
MEKVLNSNSLEEGTVKRSIILLYQQMIKKLPEYFSEQEINVIQHSSFSEIVVQLKEQNMLENFITSMEEKLHLHVLYATREEDGKVYKVVAYSTPVEDEMLVFYFSSTQYGLIDSMTVFIFESLETMYCHLLNERNRMTRLQKNILEQESYAKMLSHFN
>CP023864.1|AUI55502.1|2148_3165_+|hypothetical-protein
MKTNYISIFLALTTCIFYSCTSHPSFKNSTEAVEACKNKLTEIQSIKDADIEKVTDLTAQWQEIQDSAYSVFSRDSTINLKSPIAMAYFVVSDSMRTELTRLAFSKQRSLQDVMYLKLNTASDRDKIKKSDTYKKASEFYAKLDDEPTIKGLPKILSVYNSLLNNTQPFTQEAQLLVFIQQEDRCFRSLMEHLSNVPVHDMQQLTEKTSRLFERLYSSVGRKSDEVNDRTMLYLTMRFNRRIMQNAIACREDILNNKKLNQQQRVSYRWMLIQPYVSIDEYSTAALTEKQREELMIISKELPTLLTRLDNQKKTKEQEDKLVNTLSDYFLKSYISSTL
>CP023864.1|AUI56645.1|300_663_+|single-stranded-DNA-binding-protein
MNNFSVTGYICKDADVKNFDKAAIARFGIIIKHSERRGNETVTVSSILSLETWVKKEDTATLELLKKGKEVTVEGFFKPESYTKDGKNVTVLKNIATKVTAFVRDKKQDGPKEEKKKKKA
>CP023864.1|AUI55505.1|5682_6027_+|transposase-family-protein
MKNHQLLRCIFPDVLADYFDVVDIQESVSQIDFWLDERNFMEKSDHKLGTVSSYGFTSERVIQDFPLRGKAVYLHVRRRKWRDSSNGEIFTYSYDDLTAEGSKLSPEFVSFLKE
>CP023864.1|AUI55506.1|6142_7012_+|DDE-transposase
MEHAQDWLLFEDNIGESLSIDETCLSSGEVYTFLTNKAGKGRKGTLVAVVKGTKAEDVIQVLKKINISKRNTVKEITLDLSSSMMRIARSVFPKALITNDRFHVQKLYYDALDDMRIAYRWMARDKENQEIREAKSEGKEYIPFRYSNGDTRKQLLARAKFILTKHKTKWTETQKGRAQIIFEHYPTLKKAYDLAMKLTDIYNIKSIKDAARLKLAKWFNEVEELGVDNFYTVIDTFENHYQTILNFFVNRATNANAESFNAKVKAFRAQFRGVTDIPFFLYRLMKLCA
>CP023864.1|AUI55507.1|7041_8523_+|recombinase
MTQSNEHLRNFSKEAYKRKLSYAFDPTREHLNFEVRNGGVVTPVDKKLSIPKRIKDNLAARNIIDPNVGLDEPKYRTIANFILGGSREQMHHLAFGDQQVNLDKGADNSHITRSPEIEKWAVDMYDFMSRKFGEKNIAAFIVHLDETNPHIHCTILPITEQNKFSWKVVMAGKSKFEFSQRMTNLHNELSEVNKKYSLDRGDSIAETGRKHRTMGEYYAQKREELKGEVDSLKEDVAEQKKQISRNKVRLSEQEKEIKHGEARLKGLTTMIANLERHKSDLLHEIEKLEEDVKAGRITKEQGDIERARILDDLEKTKIKIIDKQGKLAEAEKKLDLIKGQTDVTQERYKEIKEEMRTSMPNLSSQTLRDMQAVGWNMASIEAQKQSEKLNAYRASLPPEQRAAFDEATKGFSNGSMLEQMAENSSQVALVATALFLGYLDKATEISQSAGGGSAPQSGWGKKDDEDDMAFRQRCFLMGVHMLKSGKKQNLKRK
>CP023864.1|AUI55508.1|9165_9546_+|hypothetical-protein
MNKEYLAGEYAEKEYHRVNGDDAPCFTDEPCFNFDDIRYAFEAGYDSVFERLHLLFRESQEGLVAPADFLGEGETYHVFKSASVEEPRYTFAFEYESPIKWYDTLEEAMDAANKDYKKRIKQALGL
>CP023864.1|AUI55509.1|9542_9740_+|hypothetical-protein
MNGITINDKQYIFIATNEDYIIHCDKCDLTKDGHSLSCNALCATFHELTHGRGGYGVFKELKEEK
>CP023864.1|AUI55510.1|9741_10212_+|hypothetical-protein
MTERIYQLRESEYNELFEKAKLNDKEIKELAEKYYQERGVFKITIETSIKLKSGDAYQGSRATFDVNSYCFENGLCKRDSLDPLLSENDRRRVNQMVTKICKDTFKEYYGDVIKCRNKISNIFSKLQYFKFILYMIAFSGWGVATAVILFHFIFSK
>CP023864.1|AUI55511.1|10364_10655_+|hypothetical-protein
MKRVTEINQLTKGDIIVTIADYKIVKREFVCVHPHNDKYSIFLNELQDGCPKFYNENLKLKEWYLFTNSKEEWKELNAMIVEELKKSTAFYEQRSK
>CP023864.1|AUI55512.1|10711_11299_+|hypothetical-protein
MKKIMFSDKYLLTYSVLDGIKTMTRRVLKEGTPLGNWKETVKHLPYKVGDVVAIAQPYKDIIECMAEYSDIIINVDGSINREYKAGWTNKMFVRGNLMPHHIRITDIKIERLQDISKEDCLKEGIIFIEPFAIIGEDAYFFTVKRKVRQMYDNILKFFPSPQRAYADLIDKISGKGTWESNPWVVAYSFELIKSK
>CP023864.1|AUI55513.1|11302_11974_+|hypothetical-protein
MIIKNEAELLNKFCDKTHIKEILTEPFFNTNYNEVWSSDGVVLIRINPKALTNEYSKKKLAFPKLESACNKKITLEAVNQALDECPKIDEEIVIQDAVECEDCNGSGYVTWEYMDIHGQTHEHESDCPVCDGTGEIEPERTKKTGNQITDENAVINIGNAYFRARVISKLKFALDFLGITSVKLTHNPDITANEFVLNDDIRIILMPMLSPWDEHDAAVKLVD
>CP023864.1|AUI55514.1|11977_12349_+|hypothetical-protein
MELINESKPIARKDYVCDLCSRIISKGQRYRRQFIRDDGGEAWSFKGHEECCELTSIIDFSDYYEGVDCDAFEEAITNYVQEYHNDAEDALNIAFQNRKYYDLVKMILAELKEKGITHIKLDE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP023864_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_2

191336-191703

Orphan

Consensus_repeat	Method
TCAAAGGNTAAGTAAGNT	CRT

8 spacers

The CRISPR arrays of CP023864_2

>merge|CP023864|2|191336-191703|CRT
TCAAAAGGTAAGTAAGATTGCTGTTGACTTACTTTTCTATTATATCAAAAGCTAAGTAAGTTTTTTATCGACTTACTTTTCTGTTATACCAAAGGCTAAGTATTTTTTTGTCGACTTGCTTTCCTGTTATATCAAAGGATAAGTAAGATAGCTAACGGCTTACTATTCTGTAGATTCAAAGGGTAAGTAAGATTTTTGTCGAATTGCTTTCCTGTTATATTAAAGGGTAAGTAAGATTGCTTTCGGTTTACTATTCTGTATATTCAAAGGGTAAGTAAGATATTTGTCAGCTTACTTTTCTATTATATCAAAGGCTAAGTAAGTTTTTGTCGACTTACTGTTCTGTAGCTTCAAAGGCTAAATGAACT

>CP023864|2|1|191336-191703|CRT
TCAAAAGGTAAGTAAGAT	TGCTGTTGACTTACTTTTCTATTATA
TCAAAAGCTAAGTAAGTT	TTTTATCGACTTACTTTTCTGTTATA
CCAAAGGCTAAGTATTTT	TTTGTCGACTTGCTTTCCTGTTATA
TCAAAGGATAAGTAAGAT	AGCTAACGGCTTACTATTCTGTAGAT
TCAAAGGGTAAGTAAGAT	TTTTGTCGAATTGCTTTCCTGTTATA
TTAAAGGGTAAGTAAGAT	TGCTTTCGGTTTACTATTCTGTATAT
TCAAAGGGTAAGTAAGAT	ATTTGTCAGCTTACTTTTCTATTATA
TCAAAGGCTAAGTAAGTT	TTTGTCGACTTACTGTTCTGTAGCT
TCAAAGGCTAAATGAACT

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI55647.1\|176896_179365_+\|phenylalanine--tRNA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234804
CP023864.1\|AUI55654.1\|189902_190787_+\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
CP023864.1\|AUI55651.1\|185515_186349_-\|ferredoxin	unknown	unknown	gnl\|CDD\|224069
CP023864.1\|AUI55656.1\|192027_193134_-\|DNA-replication/repair-protein-RecF	unknown	unknown	gnl\|CDD\|234608
CP023864.1\|AUI55650.1\|183680_185501_-\|peptidase-M6	unknown	unknown	gnl\|CDD\|274507
CP023864.1\|AUI55658.1\|194114_194591_+\|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl\|CDD\|187742
CP023864.1\|AUI55646.1\|175680_176565_-\|neutral-zinc-metallopeptidase	unknown	unknown	gnl\|CDD\|282131
CP023864.1\|AUI56659.1\|198088_200221_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274350
CP023864.1\|AUI55652.1\|188029_188791_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
CP023864.1\|AUI55653.1\|188801_189728_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|307170
CP023864.1\|AUI55655.1\|191732_192023_-\|DUF721-domain-containing-protein	unknown	unknown	gnl\|CDD\|377496
CP023864.1\|AUI56658.1\|186460_188005_+\|competence-protein-ComEC	unknown	unknown	gnl\|CDD\|377126
CP023864.1\|AUI55657.1\|193433_194108_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
CP023864.1\|AUI55663.1\|202898_203879_-\|capsular-biosynthesis-protein	unknown	unknown	gnl\|CDD\|378215
CP023864.1\|AUI55662.1\|201931_202744_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235640
CP023864.1\|AUI55661.1\|200300_200915_+\|peptidase	unknown	unknown	gnl\|CDD\|132880
CP023864.1\|AUI55659.1\|195628_197029_-\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|236994
CP023864.1\|AUI55649.1\|180711_182376_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|341240
CP023864.1\|AUI55648.1\|179377_180109_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
CP023864.1\|AUI55660.1\|197092_198019_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|223787

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI55647.1\|176896_179365_+\|phenylalanine--tRNA-ligase-subunit-beta	gnl\|CDD\|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	0
CP023864.1\|AUI55654.1\|189902_190787_+\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	2.32811e-151
CP023864.1\|AUI55651.1\|185515_186349_-\|ferredoxin	gnl\|CDD\|224069	COG1146, COG1146, Ferredoxin [Energy production and conversion].	2.53674e-10
CP023864.1\|AUI55656.1\|192027_193134_-\|DNA-replication/repair-protein-RecF	gnl\|CDD\|234608	PRK00064, recF, recombination protein F; Reviewed.	1.84409e-98
CP023864.1\|AUI55650.1\|183680_185501_-\|peptidase-M6	gnl\|CDD\|274507	TIGR03296, hypothetical_protein, M6 family metalloprotease domain. This model describes a metalloproteinase domain, with a characteristic HExxH motif. Examples of this domain are found in proteins in the family of immune inhibitor A, which cleaves antibacterial peptides, and in other, only distantly related proteases. This model is built to be broader and more inclusive than pfam05547.	2.42633e-48
CP023864.1\|AUI55658.1\|194114_194591_+\|6,7-dimethyl-8-ribityllumazine-synthase	gnl\|CDD\|187742	cd09209, Lumazine_synthase-I, lumazine synthase (6,7-dimethyl-8-ribityllumazine synthase, LS), catalyzes the penultimate step in the biosynthesis of riboflavin (vitamin B2); type-I. Type-I LS, also known as RibH1, catalyzes the penultimate step in the biosynthesis of riboflavin in plants and microorganisms. LS catalyse the formation of 6,7-dimethyl-8-ribityllumazine by the condensation of 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione with 3,4-dihydroxy- 2-butanone-4-phosphate. Subsequently, the lumazine intermediate dismutates to yield riboflavin and 5-amino-6-ribitylamino- 2,4(1H,3H)-pyrimidinedione, in a reaction catalyzed by riboflavin synthase synthase (RS); RS belongs to a different family of the Lumazine-synthase-like superfamily. Riboflavin is the precursor of flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD) which are essential cofactors for the catalysis of a wide range of redox reactions. These cofactors are also involved in many other processes involving DNA repair, circadian time-keeping, light sensing, and bioluminescence. Riboflavin is biosynthesized in plants, fungi and certain microorganisms; as animals lack the necessary enzymes to produce this vitamin, they acquire it from dietary sources. Type II LSs are distinct from type-I LS not only in protein sequence, but in that they exhibit different quaternary assemblies; type-I LSs form pentamers. The pathogen Brucella spp. encode both a Type-I LS and a Type-II LS called RibH1 and RibH2, respectively. RibH1/type-I LS appears to be the functional LS in Brucella spp., whereas RibH2/type-II LS has much lower catalytic activity as LS. The pathogen Brucella spp. have both a type-I LS and a type-II LS called RibH1 and RibH2, respectively. RibH1/type-I LS appears to be a functional LS in Brucella spp., whereas RibH2/type-II LS has much lower catalytic activity as LS.	3.15687e-68
CP023864.1\|AUI55646.1\|175680_176565_-\|neutral-zinc-metallopeptidase	gnl\|CDD\|282131	pfam04228, Zn_peptidase, Putative neutral zinc metallopeptidase. Members of this family have a predicted zinc binding motif characteristic of neutral zinc metallopeptidases (Prosite:PDOC00129).	1.76159e-99
CP023864.1\|AUI56659.1\|198088_200221_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.5225e-09
CP023864.1\|AUI55652.1\|188029_188791_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	1.79186e-117
CP023864.1\|AUI55653.1\|188801_189728_+\|EamA-family-transporter	gnl\|CDD\|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	3.7052e-09
CP023864.1\|AUI55655.1\|191732_192023_-\|DUF721-domain-containing-protein	gnl\|CDD\|377496	pfam05258, DUF721, Protein of unknown function (DUF721). This family contains several actinomycete proteins of unknown function.	9.34064e-19
CP023864.1\|AUI56658.1\|186460_188005_+\|competence-protein-ComEC	gnl\|CDD\|377126	pfam03772, Competence, Competence protein. Members of this family are integral membrane proteins with 6 predicted transmembrane helices. Some members of this family have been shown to be essential for bacterial competence in uptake of extracellular DNA. These proteins may transport DNA across the cell membrane. These proteins contain a highly conserved motif in the amino terminal transmembrane region that has two histidines that may form a metal binding site.	1.06008e-57
CP023864.1\|AUI55657.1\|193433_194108_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	0.000408488
CP023864.1\|AUI55663.1\|202898_203879_-\|capsular-biosynthesis-protein	gnl\|CDD\|378215	pfam09587, PGA_cap, Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.	7.12463e-71
CP023864.1\|AUI55662.1\|201931_202744_-\|hypothetical-protein	gnl\|CDD\|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	0.000427928
CP023864.1\|AUI55661.1\|200300_200915_+\|peptidase	gnl\|CDD\|132880	cd06561, AlkD_like, A new structural DNA glycosylase. This domain represents a new and uncharacterized structural superfamily of DNA glycosylases that form an alpha-alpha superhelix fold that are not belong to the identified five structural DNA glycosylase superfamilies (UDG, AAG/MNPG, MutM/Fpg and helix-hairpin-helix). DNA glycosylases removing alkylated base residues have been identified in all organisms investigated and may be universally present in nature. DNA glycosylases catalyze the first step in Base Excision Repair (BER) pathway by cleaving damaged DNA bases within double strand DNA to produce an abasic site. The resulting abasic site is further processed by AP endonuclease, phosphodiesterase, DNA polymerases, and DNA ligase functions to restore the DNA to an undamaged state. All glycosylase examined to date utilize a similar strategy for binding DNA and base flipping despite their structural diversity.	3.70734e-15
CP023864.1\|AUI55659.1\|195628_197029_-\|DNA-repair-protein-RadA	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
CP023864.1\|AUI55649.1\|180711_182376_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|341240	cd05914, LC_FACL_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL). The members of this family are bacterial long-chain fatty acid CoA synthetase, most of which are as yet uncharacterized. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.	6.88353e-139
CP023864.1\|AUI55648.1\|179377_180109_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	1.46354e-128
CP023864.1\|AUI55660.1\|197092_198019_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|223787	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism].	1.22154e-08

>CP023864.1|AUI55654.1|189902_190787_+|4-hydroxy-tetrahydrodipicolinate-synthase
MQNIFHGLGIALITPFKEDYSIDYEALENLVNYHLDNGADFFCILATTGEAPCLTLEEKNELTAVIKRVVNGRVPILKYCGGNNTAAVVEEIKTTDWSGIDGILSICPYYNKPSQEGLYQHFKAIANVSPLPIVLYNVPGRVGVNMTAETTVRIASEFPNIVAIKEASGNLEQVDEIIKNKPKHFEVISGDDALTFPMIASGAVGVISVIGNALPKEFSRMIRLEFRGEYEPARKIHHQFTELYKLLFVDGNPAGCKALLNDMGMIENVLRLPLVPTRIETKQKMNEILKGMRI
>CP023864.1|AUI55653.1|188801_189728_+|EamA-family-transporter
MWILLAFVSATLLGLYDTSKKYSLRGNDVIPVLFLNTLFCSAIFLPLILLSQYTHILDSSILHVGAGGWEMHRWIILKSVIVLLSWVFGYFAIAQLPLTIVGPINATRPVMTLVGAMLVFGERLNGWQWVGVCLAIVSLFLLARSGKKEGIDFKHNKWIFFLVLAALMGTCSGLLDKYLMASPEEGGVGLDRMMAQSWYNIYQCVMMGLVLLIYLINNRKKRAQRVHFSWRWSILLISIFLSMADFAYFYALSLPRAMISIVSMVRRGSVLVSFVCGAVLFRERNLKAKAIDMCFVLLGMIFLWIGSR
>CP023864.1|AUI55652.1|188029_188791_+|tRNA-pseudouridine(38-40)-synthase-TruA
MQRYFITLSYDGTAYHGWQIQPNGVSVQEVLEKALSTILRNVISITGAGRTDAGVHGRMMVAHFDTEQAFDCGQLVYKVNRLLPRDISVSKIEAADEDLHARFSATSRTYHYYVHTGKQPFSRQYSCELRYPLNFDKMNEAAAYLIGEKDFKCFCKAGADVKTTICRLTEARWYPVNNEFALTTGDNVTNWCFVITANRFLRNMVRAVVGTLVDVGRGRLSLDDFKKIVDEGTRNDAGESMPGNALFLWDIKY
>CP023864.1|AUI56658.1|186460_188005_+|competence-protein-ComEC
MKKKIDLLMYPSVKLLMPLALGIAVGDTLEEYITPVVWWVMMVCMIIITYFTWKMKYIQSLLLLSTVFLIGGTLVSMKRQSSEIRLPDTPITFKAVLLSNPIVHGKVVQVDLMAMTKDRPIMVRASILRDTITNRYRTLQIGDGIEATAYLEKPMNFSDATFDYARWLKRHGYLAETFILYNQWQRAKVSLRQMSFLQRTSLAAGIYRLRLMRLLERNFDRTHLAIVSAMTLGDKSLIDKDVKEDYSLTGASHVLALSGLHLTILYGLLVFLLGKCERLFPRLFRRAVCEILILLILWGYVILVGMSSSVIRSAVMLTIYSFVTLLNRARLSVNTLALTAIILLIINPYQLFDISFQLSFISVWSILLFYPLIYELIPLGKGKLLSPVRWVWGMIAVSCAAQLGTAPLIAYYFGRVSTVFAISSLVAVPCTMVIIPATFCLLILTPLPFIAYYVSKFISIITEYMNTSLHWLASLPYTSIENIHITILQLFIYYFMLMAIWIMWSFLAGKIEFK
>CP023864.1|AUI55651.1|185515_186349_-|ferredoxin
MIFYFSGTGNSKWAAKTLASETDDKLVSIPEVINKDCSFTLEKGEQVGFIFPIHGWRVPSIVKEFITKLTIKTEAGDTPLVKHYCFCLVTAGDSIGKAMERFLQQLKSTTVGDSLSLEAVCSLIMPESYVGLPGMDVDKKEKELEKKELASKQLKEFSKIIKQRYPLGNKQIWGWEQLKRGPIPSFFSGPVGGFFERFLITDKPFHVDSRRCVKCGICANVCPVSDIKGGLGYEPEWLHNGKCLTCFSCYHHCPHHAIDFGKRTQKKGQYFYNKLSK
>CP023864.1|AUI55650.1|183680_185501_-|peptidase-M6
MIRTFKHLTIFVCLMLCSLTTWAAKAVSIPVQVRQADGSVITVILRGDEHINWYTTLDGVLLVQGADNNYYIGKVEKSGNLIATKQLAHEALTRSQAERNLIAKQDKEKFFAYVNKIAEESENAYDNSPLTRGPIVDSGYGGVPYFPHTGSPKALVILAEFQDVPFTIQDTKKIFTNYLTNEGHFSDTRYGQNLNNKGVRGYFKDCSYGQFTPVFDVIGPVKLPKPQAVYGEGIHDRMDLLLPDVCEAVDDSVNFADYDANNDGMVDLVYVIYAGYSANYSGNKETDIWPKSSIVNISNTYDGKSIHRYGVSNELAGDENKTKGKEKINGIGLFCHEFSHTLGLPDIYAYRTPAENQDNQGMEFWDIMDGGTEVRNGRVPASYLAWEREVMGWMKIDELKNDSSIEKLKSIDNGGKAYKIVNPNNSNEYIVLQSIQKGPWYQGWTKDNYAKGLLAYRVSYPFNKVNVFDFPNNVKGKPRVIPIPADGKILAAKNATSYLEYVNQHNGDLYPYNRIDYISGFKMFDGSILEKSIVSIKENDGGDSNNNYVNFEFKNGLVPTGIQPLSIFERSTSDNRIYTLDGRYVGTDASILPHGIYIQNNKKFVK
>CP023864.1|AUI55649.1|180711_182376_+|long-chain-fatty-acid--CoA-ligase
MDAINSFNACIEKSIKDNWDKDALTDYLGATLQYHDVARKIEKLHILFANSGLKKGDKVALCGRNSSSWAVAFFATLTYGAVAVPVQNEFKPEQIYNIVNHSEAKLLFVGDVVATAIDGEQMRQLEGIIYLPDFSSILSRSESLTNARENLNALFGKKFPKFFRAEDVNYFKDEADDLALINYTSGTTGFSKGVMLSYRSIRSNLAWAIADIKPHIKPDSKVLCILPMAHMYGMICEFICQFCFGSHLYFLTRLPSPSLIAQACRDIHPAIIMSVPMVVEKIIRKNVFPRVQSTATRMLLKMPVVSKKVKEKIRAIVMECFGGNAYEVVTGGAALNKEIEDFLVSIDFPITSVYGATECGPLVTFSDYKDFVPGSCGTPALNMEVKIVSSDPEHVPGEVITRGENVMLGYYKNEEATKEVLDKDGWYHTGDLGTMSVDGHLFIRGRIKNMLLGSNGQNVYPEEIEDKLNSMSMVSECVVIQRGDKIVGLVHPDFDEAKEMGFSQSDLQEIMEQNRIELNAMLPSFCHLSAIELRDEEFAKTPKKSIKRYLYQEK
>CP023864.1|AUI55648.1|179377_180109_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRAFEYRKATKLKRWGHMARTFTKLGKEIAIAVKAGGPEPENNPRLRAIIATCKRENMPKDNIQRAIKNAMGKDTSDYKEVTYEGYGPHGVAVFVDTLTDNTTRTVGDVRSIFNKFNGNLGTQGSLSFLFDHKAVFSFKKKEGVDMEELILDLIDYGVDDEYDEDEEENEITIYGEPTSFGEIQKHLEDNGFEITSAEFTRIPNDLKDVTDEERETIDKMVERLEDFDDVQNVYTNMKPAEE
>CP023864.1|AUI55647.1|176896_179365_+|phenylalanine--tRNA-ligase-subunit-beta
MKISYKWLKEYVDFNLSPEEIAVALTSIGLEVGSLDEVETIRGGLKGLYVGKVLTCEAHPNSDHLHVTTVDLGKGEPQQIVCGAPNVAAGQKVIVADLGCVLYDGDNEFTIKKSKLRGVESLGMICAEDEIGVGTAHDGIIVLPEDAPVGQPASEYYHLDSDWLIDIDITANRADALSHYGVARDLYAWLIQNGYKTSLHRPSCDAFKVDNHDLPIKVTIENTDACRRYACLSLTDCEVKESPQWLKDKLNVIGLRPINNIVDITNYIMMAYGQPMHCFDADMVKGHHIIVKDKNEGKKFVTLDGEEHILGEHDLAICNEEDPMCIAGVFGGKGSGTYETTKNVVLESAYFHPTWIRKSARRHGLSTDASFRFERGIDPNGIVYALKQAAILCQELAGGKVSMEICDEYPTKMEGFPVRLNYEYCDRLIGKKLGHDTIKRIAESLEMKVENEDAEGLNLLVPPYRVDVQRPCDVVEDILRIYGYNNVEIPTELKSSLTIAEEADKNYHRENIIGEQLVGAGFSEIMNNSLTKSSYYEEAGLNAYPWEETVKVMNPLSADLGVMRQTLLFGGLESIVRNVNRKAQNLRFFEVGNVYKYNKERWTEENPVKAYSQDYHMALWVTGKRVQGSWAHPDEESSFYELKAHVENILRRIGVAQGLLVSEKSDNNVFDKAIALKTRAGKVLVEMGILSHKLLKRFGLDQKVYYADLDWAGLMKAIRKNKLQFQEISKYPAVSRDLALLVDNNVEFAQIEEIARQADKKLLKRVELFDVYQGKNLPEGKKSYAVNFILQDETKTLNDKAIDAIMQKLIKNLTNKLGAELR
>CP023864.1|AUI55646.1|175680_176565_-|neutral-zinc-metallopeptidase
MRLTGRRESNNVDDRRGMGMGTKAGIGGIGGIILIALITFLSGGDMGDVVNNVLQQELQGPTEVQTGGQQHQFSAEEEKLANFSKQILAGTEDVWTEQFQLHGMRYQYPTLVLYTGAVQTACGDGSAAMGPFYCSADQRLYLDLSFFSGMRKDLGLKAKGDLDFAYAYVIAHEVGHHVEYLRGILGECHAKMARVNKEEANKLSVKLELLADYYAGCWAHYDNEKYQSLTDGDIEEAIDCAEKIGDNYLQKKARGYAMPETFTHGTSEQRMYWLKKGIETGDWNTTTFSPSDLD
>CP023864.1|AUI55655.1|191732_192023_-|DUF721-domain-containing-protein
MFRRKVQPLDDLLNQFLRQEGLESPLLQKRLIAAWDTVAGPTVARYTQEKFIKNQTLFVKIINPALRANLSMMQSDLTKKLNATVGSMVISEVRFY
>CP023864.1|AUI55656.1|192027_193134_-|DNA-replication/repair-protein-RecF
MQLEKLSIINYKNIQTATLDLSPKLNCFIGHNGEGKTNLLDAVYYLSFCKSAFNPKDSEVMRHDADYFVLEGDYSTDAGEHEQVYCGMKRGSKKHFKRNKKEYKRLSQHIGLIPLIFVSPADATLIEGGSEERRRLMDVVISQYDTPYIESLSRYNKALQQRNSLLKQEEEPDPTLLELLEMQMAEHGEEVYKKRAAFVEELTPVFQHIYQTICSEREQVSLEYVSHCQRGSLLEVIQRDRAKDRIMGYSLHGTHKDDLIMKLGGYPMKKEGSQGQNKTYVLALKLAQFDFLRRTAGNTTPLLLLDDIFDKLDSSRVEQIVRLVSGDDFGQIFITDTNRDHLDKILQGSGFNYKLFSVEGGEINKKEG
>CP023864.1|AUI55657.1|193433_194108_+|hypothetical-protein
MVNNKEQGTHEDALIQSEVAFLKYKKPIIIAVIAIVVVVAGFFLYKNFVSGPREDEASTELAKSQTLFNGQQYDQALAGFQKIQSDYSGTDAGNLANLYVALCYAHQAKPNWAKALENAEKFSTSDDEMISPASQMALGDIYANNNQNDKAVECFKKAAKMADSEAADNVNLSIAPLALRKAGVLLESEGKKAEALEIYKNIKKTYVNSPIYQDIDKYIERASN
>CP023864.1|AUI55658.1|194114_194591_+|6,7-dimethyl-8-ribityllumazine-synthase
MATELHHLSDYDAQSVPDASNMCFGIVVAEWNPEITGALLDGAVKTLEKHGAIPENIHIKTVPGSFELVYGAQMMTKNDGFDAVIILGSVIRGETPHFDYICQGVTYGIARLNASQNIPVIYGLLTTDDLQQAKDRSGGKLGNKGDECAIDAIKMAKF
>CP023864.1|AUI55659.1|195628_197029_-|DNA-repair-protein-RadA
MGKDKIAYVCSSCGQESAKWIGKCPNCGQWNTFKEIRIAADTGSQAARNAATTLRNAASGGATSALTNKPQRLRDVSSHDDPRIDMHDNELNRVLGGGLVPGSIVLLGGEPGIGKSTLTLQTILHLTQRVLYVSGEESPHQIKMRAERISKDIAENIIILSETSLEHIFEHIRDVQPELVVVDSIQTISTEDVDSSPGSVTQVRECASALLRFAKTSGVPVILIGHINKEGSIAGPKILEHIVDTVIQFEGDQHYMYRILRSIKNRFGSTSELGIYEMEQQGLREVSNPSELLLTEDHEGLSGVAISSTIEGARPFLVETQALVSSAAYGTPQRSATGFDQRRLNMLLAVLEKRVGFKLMQKDVFLNIAGGLRVTDMAMDLSVIAAVLSSNVDTPIEQGWCMCGEVGLSGEVRPISRIEQRIAEAEKLGFSHIIIPKYNLSGLTGKYKIQLHPVRKVEEALRALFG
>CP023864.1|AUI55660.1|197092_198019_+|ABC-transporter-substrate-binding-protein
MKCINYLLLLVALTVVSCGKSDKELQAERQAKMQAEREAYQKAYKIAVMPTMDCLPAYLLKDSLLYDTAKVDIRLCRFNAQMDCDTAMIGGSVQAAFTDLVRAERLKHRSKVLMHYLTDTNLNWQLIADKESKLKKLSDLSDKIVAMTRYSGTDLLTDMVVKKAKPKYQVFRVQVNDVLVRLAMLQNHEIDAYWFAEPQITKALAGDNNALFNSQDAGVHLGVVAVMDKVRRQEEEAAFASAYDKAVELINKNGVKYYSALIQKYMKVDEAVVRSLPDIKYTKIGPPRKVDLLMARNYLNGGKIINKN
>CP023864.1|AUI56659.1|198088_200221_+|tetratricopeptide-repeat-protein
MDKRLSNAIDVLEQLYSQRPSLIGHGEFDSIKSDYQLMVDYMGKGFPDSHRESLYKTLLQRLYRVTADLEISWRCKNVSAYANSFRVADHLNTSHDFVRTVLEAFVSDVALLSLQPEETREEKSKELYERHHSFINRLFNALWTSCQWTDNDSSFYTDLLLSPTVVSADQQVIVSAISLSAMNQFDINKFKTLVKVYQAAFDQHVKQRALVGWVLSIFEGMDIFPEQDAIIHELCSSQAVAKELLTLQIQFFYSSDAEKDNDKIQRDIMPDIMRNSNLTIGRLGIMEKEEDALESILHQDADEKRMEQLEEKVRKMMDMQKQGSDIYFGGFRQMKQFPFFYDMVNWFTPFYLDHPALRPVIQKLGDTKFLETLMNRSNFCESDRYSLAFALEQIINQLPSNIKEAIGSDAMLGPLAESDDTEDAISIRRTYLQDLYRFFRLYPTANNFINPFEDSGKGDFVGDTFFFTYKSFIGTGLDEVKLRLAMHLYKHQQMTELADLLTTFQSDDPRYAILMGYTNISLGKAEYAYPFFDKALKIEPDNQWALKGKARAALESEDYHTAEEVYALLLALEPNNKNYTMNRCVALLKLGRTSEVREELFRLDYQYPNDLNVKRILAWAMLSDKSLDKAAQLYESLLSTTPGNEDYLNAGYCQWAKGDVKRAVELFREWMRKSGNDTEQLLDEFHNDTDTLKKYGISETDCYLMLSLVG
>CP023864.1|AUI55661.1|200300_200915_+|peptidase
MNEQIHEKLKEIKQSFRLMMNGVASHSMREKWVAYKINWGVPIPDLQKMAAEYGKDYELAIELWKEEIRECQVLATLIMPAEKMDEDLVEVWMERLRTQEMAEMLAFNLLQHLDFAPALAYKWIASDRDMYQLCGYQLLARLFARGMEPNERGINEFLDQAHTTLEGNNLPLKHAAYNCVLSFCELGDEFDVIAQKALADLNIL
>CP023864.1|AUI55662.1|201931_202744_-|hypothetical-protein
MKRQGQAQSLKNLTKSNVWDIQENDVFRLWAQAERDSDLRDNERHYIDVIKSAFTIEEVKVDKPEVIKKYEERGCQVGQVRLDEGTTVKWALRKKPIQRITDLTWENIHHISAQKLIEVLERNFGGGWESLPQSVQDIILSGFDISTTTLPTARLKKPGGLYEKKVADGFEVLEISKGSWTEAIFAKEKPVTMVKPARLSSLEDSDDDNLLKDLDEEDDELPEEDKRQDDDDDEDFDDDKLTEESYRTTFDTNPEELEMQADEVGEDADY
>CP023864.1|AUI55663.1|202898_203879_-|capsular-biosynthesis-protein
MMKRPSIVRVVKAFACLLVPILLSFSGIGGSVFTKKRLASKGIEDSLRIVITGDLLLDRGVRQKIEMVGVDALFSPSIDSLFHASNYVIANLECPVTKIRERVFKRFIFRGEPEWLPTLRRHGITHLNLANNHSIDQGRNGLLDTQEQIRKAGMIPIGAGRNMAEASEPVLISTKPRHVWVVSSLRLPLENFPYLPQKPCVSQESMDSLIMRVERLRAADKGCYILLILHWGWEHHFNATPLQRENARRLIEAGADAIVGHHSHTLQTIENYRGKPIYYGIGNFIFDQRKPMNSRACIVELTITVNKSKAKALPIEIKNCVPYLGK

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Crispr_ID: CP023864_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_3

844687-844775

Orphan

Consensus_repeat	Method
CCAATAGGGGTAACCTCACATAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_3

>merge|CP023864|3|844687-844775|CRISPRCasFinder
CCAATAGGGGTAACCTCACATACTACGCCCCTCGCCATTCGGAGAGGGGTTGGGGGTGAGGCGAGACCAATAGGGGTAACCTCACATAC

>CP023864|3|2|844687-844775|CRISPRCasFinder
CCAATAGGGGTAACCTCACATAC	TACGCCCCTCGCCATTCGGAGAGGGGTTGGGGGTGAGGCGAGA
CCAATAGGGGTAACCTCACATAC

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56082.1\|827554_828916_+\|mobilization-protein	unknown	unknown	gnl\|CDD\|366451
CP023864.1\|AUI56086.1\|838070_839330_+\|ATPase	unknown	unknown	gnl\|CDD\|224292
CP023864.1\|AUI56088.1\|841181_842798_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372499
CP023864.1\|AUI56100.1\|863787_864048_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56098.1\|859156_861808_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372499
CP023864.1\|AUI56096.1\|851366_854675_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
CP023864.1\|AUI56089.1\|842847_843078_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56092.1\|845440_846748_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271342
CP023864.1\|AUI56091.1\|845131_845374_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56093.1\|846755_848510_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372921
CP023864.1\|AUI56083.1\|828952_829741_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56095.1\|849498_851211_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373012
CP023864.1\|AUI56094.1\|848528_849476_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275342
CP023864.1\|AUI56099.1\|863000_863423_+\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
CP023864.1\|AUI56085.1\|836867_837167_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56090.1\|843323_843530_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56697.1\|837177_837621_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275383
CP023864.1\|AUI56084.1\|832104_834615_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
CP023864.1\|AUI56097.1\|855960_858441_-\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
CP023864.1\|AUI56087.1\|839615_840917_-\|transposase	unknown	unknown	gnl\|CDD\|379340

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56082.1\|827554_828916_+\|mobilization-protein	gnl\|CDD\|366451	pfam01076, Mob_Pre, Plasmid recombination enzyme. With some plasmids, recombination can occur in a site specific manner that is independent of RecA. In such cases, the recombination event requires another protein called Pre. Pre is a plasmid recombination enzyme. This protein is also known as Mob (conjugative mobilisation).	1.96331e-26
CP023864.1\|AUI56086.1\|838070_839330_+\|ATPase	gnl\|CDD\|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	9.16412e-63
CP023864.1\|AUI56088.1\|841181_842798_-\|hypothetical-protein	gnl\|CDD\|372499	pfam13149, Mfa_like_1, Fimbrillin-like. A family of putative fimbrillin proteins found by clustering human gut metagenomic sequences. Analysis of structural comparisons shows this family to be part of the FimbA (CL0450) superfamily of adhesin components or fimbrillins.	0.00101027
CP023864.1\|AUI56096.1\|851366_854675_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
CP023864.1\|AUI56092.1\|845440_846748_-\|hypothetical-protein	gnl\|CDD\|271342	cd14948, BACON, Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain. The BACON domain is found in diverse domain architectures and accociated with a wide variety of domains, including carbohydrate-active enzymes and proteases. It was named for its suggested function of carbohydrate binding; the latter was inferred from domain architectures, sequence conservation, and phyletic distribution. However, recent experimental data suggest that its primary function in Bacteroides ovatus endo-xyloglucanase BoGH5A is to distance the catalytic module from the cell surface and confer additional mobility to the catalytic domain for attack of the polysaccharide. No evidence for a direct role in carbohydrate binding could be found in that case. The large majority of BACON domains are found in Bacteroidetes.	1.34037e-08
CP023864.1\|AUI56093.1\|846755_848510_-\|hypothetical-protein	gnl\|CDD\|372921	pfam14135, DUF4302, Domain of unknown function (DUF4302). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 344 and 443 amino acids in length. There are two completely conserved residues (R and L) that may be functionally important.	6.5945e-46
CP023864.1\|AUI56094.1\|848528_849476_-\|hypothetical-protein	gnl\|CDD\|275342	TIGR04549, LP_HExxH_w_tonB, substrate import-associated zinc metallohydrolase lipoprotein. Members of this family are lipoproteins with the typical zinc metallohydrolase HExxH motif and additional similarities to a better-documented zinc peptidase family, pfam06167. The seed alignment begins immediately after the lipoprotein motif Cys residue. Up to five members of this protein family occur per genome, in the context of certain gene pairs related to RagA and RagB, or to SusC and SusD. Those gene pairs, like the present family, are restricted to the Bacteriodetes, may number up to 100 pairs per genome, and are linked to TonB-dependent uptake of biopolymer-derived nutrients such as glycans. A possible function for this lipoprotein is to hydrolyse larger molecules to prepare substrates for import and utilization. [Unknown function, Enzymes of unknown specificity].	1.98532e-128
CP023864.1\|AUI56095.1\|849498_851211_-\|hypothetical-protein	gnl\|CDD\|373012	pfam14322, SusD-like_3, Starch-binding associating with outer membrane. SusD is a secreted polysaccharide-binding protein with an N-terminal lipid moiety that allows it to associate with the outer membrane. SusD probably mediates xyloglucan-binding prior to xyloglucan transport in the periplasm for degradation. This domain is found N-terminal to pfam07980.	1.92171e-27
CP023864.1\|AUI56099.1\|863000_863423_+\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	3.76746e-13
CP023864.1\|AUI56098.1\|859156_861808_-\|hypothetical-protein	gnl\|CDD\|372499	pfam13149, Mfa_like_1, Fimbrillin-like. A family of putative fimbrillin proteins found by clustering human gut metagenomic sequences. Analysis of structural comparisons shows this family to be part of the FimbA (CL0450) superfamily of adhesin components or fimbrillins.	2.27765e-12
CP023864.1\|AUI56697.1\|837177_837621_-\|hypothetical-protein	gnl\|CDD\|275383	sd00036, LRR_3, leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	2.85258e-12
CP023864.1\|AUI56084.1\|832104_834615_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	3.14183e-45
CP023864.1\|AUI56097.1\|855960_858441_-\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
CP023864.1\|AUI56087.1\|839615_840917_-\|transposase	gnl\|CDD\|379340	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	4.86556e-06

>CP023864.1|AUI56090.1|843323_843530_-|hypothetical-protein
MEMIKNIITAIGCDLRTRGAQTFCGVIDSLTKKDRKKSENYLVVPNNCVLSLSLSLSLSLSLSHIGQA
>CP023864.1|AUI56089.1|842847_843078_-|hypothetical-protein
MKIMEKVKRAYAQPACGFVCTEIETLMNQASGSAGTIGHGSQAGDAKQAPVWMDNEEDEEEEKSSWVSTRRNDLWD
>CP023864.1|AUI56088.1|841181_842798_-|hypothetical-protein
MRQLTQFAACAIAALSVVACSSEDSAQQDNAKQNTTKGVATFDGSQPSNDTRALTRTTATYTLGGDAKVFWSSADKIFVQDDANTFHQSNAANLYNPSNKAKATFSLASGSFTLNNREVRYTGENGTDANTVTIATTQTQTTANDFSHLGTSGDCGTATATGSNGNYTFTLNHKASYLCFVPRCMNTDLGPNIKLTKIKVTADQPIAGKYDFSTGSLAQKAGETYSNTVTLNTSDFSLNTTTSSLATNGAYMVVAPGTYNFTITYTIKDPATNVEGDIVKTIASYNCQEGKINDITANLTPKDYSNEFAKNYYMWDAQTNYWSGHNWKDSDPWQPVAPNQPNNNYPKPGDPRYKSTVAEYNGTTPTPYTATQSCANLPTVNAMLWFVMKGDPHWDDSLWSLMGHLGKGGMWIKKRAKIISDEGISSQIFDEKYPDPDNSNVLTDWRYKTTWPWTKFENHNISSVSTLNAVSDYFFLPTIGFYDNAQLYSIGIKGLYWSSTSSPWYSSGGYALGVQEEMTVVAPSYRTWGFQVQPALFQ
>CP023864.1|AUI56087.1|839615_840917_-|transposase
MTKVAIKNENITSFGGIYHIMDVFSKLGFEKLTESVLGKRGSSGKAFSHGSIFGSLFFSYLCGGDCLEDINVLIGQFKQRPNTLLPGADTVGRGLKELAEENIVYKSETSGKSYSFNTAEKLNTLLLRMIRRMGLIKAGSHVDLDFDHQFVPARKFDAKYSYKQDFGYFPGWASIGGIIVGGENRDGNTNVNFHQEDTLRRIMDRVTSELGVVIERFRADCGSFLKEIIQTVEQRCNTFYIRAANCGNRCEEFYHLKEWKSIEVGYEKCDVTSISMDSLIEGKSYRLVVQRSPLKDKDGKQQTDMFGVIYTYRCILTNDWVSTEKDIITFYNERGASEKNFDIQNNDFGWSHLPFSFMAENMVFMMVTAMLKNFYLYLVRHISEKVKPLKKTSRLKAFILHFVSVPAKWVRTGRQNVLNLYTNKTYYSEVFLE
>CP023864.1|AUI56086.1|838070_839330_+|ATPase
MIFERKKYLDELIAGRGNGLVKIITGVRRCGKSFLLFDIWHNWLLEHGVTDSHIIEIQLDDFRNRRLRKPDTLLDYIDSKVVDDGKPYYIVLDEVQLVEEFVEVILSLTHMRNVDVYVSGSNSRFLSSDVVTEFRGRGDEIRIWPLTFDEYFSGIGGDIRKAWLDYYTFGGLPQVALLETEEKKTDYLRGLYETTYLRDVIERNHLRNPEGMKELVRVIASGIGSSTNPTRIANTFQSSQGVTIKRDTIKQYIDYLKDSFLIEEALRYDVKGRKYISTETKYYFADIGIRAAILNYRQQEETHIMENIIYNELRSRGYNVDVGLVELGGKDENGKFVRKQLEVDFVVNRPPYRVYIQSAFHMPTPEKEQQERRPLLSINDHFRKIVIVGDDIHRKEDELGVLTVGLLDFLTDKKILEQG
>CP023864.1|AUI56697.1|837177_837621_-|hypothetical-protein
MPNSVTTIGSEAFSGCTNLQKVHIGDSVKAIGEYAFDNCTSITQISSEAVVPPTCESGVFTDLNKSKCKLFVPKNSLDAYKQADQWKDFFLIEGSTTGITNTVYNKAELADVYTIDGAKRLSKASTDEINALPKGVYIVNGKKIIIK
>CP023864.1|AUI56085.1|836867_837167_+|hypothetical-protein
MTSYKIAFTVFAKPTLITILLTLFNGAMRTAIKADFLSSKSFLLKTIVNKGITRDFRSLFVTYAGVLHYAGIHVLEVWSLQRYIIPAFLYITNQIYLSI
>CP023864.1|AUI56084.1|832104_834615_+|TonB-dependent-receptor
MIKKRTVKQILCKSAFVFAATFVLSLPTYARHENEVKVNTEANIKGRVVDSKTQHPLSHASVLVLGTVITTTTDADGHFMLRNLPVGKVIVEVRSAGYRAYKHEVTTQKNNTHELNVMLKPDEIALDEVVVSANRSQTLRRESPVVVNVLDTKLLESTHSTTLVQGLNFQPGVRTEDNCTNCGFSQVRINGLDGHYSQILIDSRPVFTALQGVYGLEQIPSNMVQRVEIVRGGGSALFGASAIGGTINIITKEPSENSADVAHTITGATNGSTAFDNNTTGNLSVVTTNNRAGFYLYGQSRHRAAYDRDGDGYTDLPTLDNKTVGLSSFFRLTDYSKITLKYHGLKEYRRGGNKLYLPAHEANIAEQIEHTINGGSLGYDLFSLNGKGHFSAYASFQNVDRKSYYGGLGELATAADGLKALNEAYKLGLNLDMSEDDAATLPANQQQTLADAQAYDKAQRAYNLTHNINYIAGAQYVHNFDRLWFMPSSLVVGAEYSYDRIKDHSLGYNSLMEQRVNIGSFFAQNEWKNNHWGLLLGGRLDKHNLISHLIFSPRVNLRYNPTPNTNFRLTYAGGFRAPQAFDEDLHTRIADGDRVKIALAKDLKEERSHSFSASADLYKSFGTVQTNVLIEGFYTRLNNMFATRKLADDVIIDGARVEERFNSNGATVYGINLEGKASLSSWAQLQAGFTWQSSRYRTPEEWDDDAAPEFKTTKRLLRTPNTYGYFTLTVHPTIDFALSLSGVYTGRMYVGHPKGGSERTNDFAIIEHTPAFLTLNLKLAYNFYITKQVKLEASAGVQNMLDAYQKDLDKGASRASDYVYGPTQPRSLFLGVKFSY
>CP023864.1|AUI56083.1|828952_829741_-|hypothetical-protein
MAHRKTCFVLLFLAFLLACASCSNPQDEDRKSSFQLDKPYREIMQGSTLRVFITSGSGDLQISNSNAFKDYARIAYARTPEQAGHVGVLSIQALQVGEFQVSLTDNLTKERQQLTVKVLPPYLLLEIHEGSDPVWSIGSGVSGLFLVQNAAHSFYLCRYKPTLYRYVSPAVLSGVYEIVMKDGVPTNLRLQSKKQGIVRDFTLTGKNKKEALEKLGRLGRLGLLPNEEKFICPVFLDEHDMEEHIMAEMTYKEATLPEKVME
>CP023864.1|AUI56082.1|827554_828916_+|mobilization-protein
MGYCVLHLEKAKGADSGMSAHIERTIVPKNIDPTRTHLNRELIRFPDGVCNRTAAIRHRLDTAGLKRKIGKNQVQAIRIVLSGTHEDMERMENERRLGEWCDDSVAWLRETYGADNLVSAVLHMDEETPHIHATVVPIVQGERRKQKKEEKAKRRYRTKATAPRLCADEVMSRANLIRYQDTYAEHMAKYELKRGVRGSTAKHLSTHEYYRNLITQGEDIQENIANLLAREAEARCIIEEAEQAKMELARIKAEKKTVELKNSATKTATAALNGINSLLGGNKVSRLESENRQLHGEVAELKESIGQMRTDMQKMKESHVAERLRASEQHQREIGNLRRIIDKAKEWFPMLAEFFRIERLCRSVGLSERHTDELLQGKVLVVTGKLHSDEYRRSFAVEKARLQVGREERDGKTVLDLLVDRVPIARWFKEQWEKFRHLSVHSSQENRSKGVRL
>CP023864.1|AUI56091.1|845131_845374_-|hypothetical-protein
MQAYGILFVRSIQQAWCDIYSLTQAYYVLIIRSIQQAWFDSYPPTQAYYVLIIRSIQQAWFDSYSLTQAYYVLFVRPTQG
>CP023864.1|AUI56092.1|845440_846748_-|hypothetical-protein
MRKIFNICILFAVAAGFIACSDDNDAGSTYLRKNPVNVVSSKLFFSAAAQKGGVKFTAPAGSTVSVSDSWATAQLLNDSVVVSVTNNPAVDSRSAVLTIKNGNDSTNLPILQSGAVFKYKGAKNIVVSDKDTTLTLPYSKVGAEPALVLADSADASAVSSVEDKDSAFVAHINANSTGEVRTFLLVLKNQEQRDTITVTQGSIDDFDGKTYSLYGYDLLKMTSSTTDINSLVTQFVGTFEKVSDTKLSFVSDDTGMKMLFYFDPADLSLTLKGGEYILTQTKDNTSYRYRTAFWDIKHYAVLMNLIQQQTAAHNAGKVSDDDFAKFQRMVTAIYDIYASPNLSMTARMTYSKEDGMVAGLLESNAASAAYIQSYNALGKLGFPIGSFNGNALAIYKYAQQGRTLTFNNVSYLLQPVMLFHPLSTSAKPAAFLKKR
>CP023864.1|AUI56093.1|846755_848510_-|hypothetical-protein
MKATKLFIYLLLALPAFFLQSCQTEEDNVFDKPYSERMGEFLQKAQDTLTASQYGWVLDYYPQSNQRYGGVAYTIKFTRDDAIVRYEKNPDDGEVKSLYKMKEDDGPVLSFDTYNAFLHKYATPKKGEYRGMEGDFEFVIDEIKSDYIKIHGKRSLNTMYLRKLSEPATDYIEQVTDLTNLFVFSDFNLSIGGKTYTLVITDRDNRQLAIYDGNTPIAESAYTFTDRGIRLYEPITINGAVVYDLTFDKETAKLSGNGVQTTSSKIDVNVIANLIGTIDVSNGAKKIKKTIPYLSWLNVSCDASWVHLTKEGNTLTIDVDANAIATKARGAKIKISNGIDEASAAVMQYDLSALMGYYELKMTSYVAGDNNKDVLKVNTRQARLRYEGSGANRKFYLNVSSPYGDDFVFPLTYVASAKAFLMQSCQNVITIRNSRATYYIANSFNIDANRGTGTDTDFYNLITFSVNENGDISASLCGPLFVKVNGQLRYVNLTTERFILNAYSSEPFSDDNIVAMLDMWINPVITKRSSSSSSAKPAILPEETSDNTLSLQMPQYLPNRIPSFDVDFSSRLTTSVAKQVKLNK
>CP023864.1|AUI56094.1|848528_849476_-|hypothetical-protein
MKKNILALSLLAAVAAGFTACSDDALSSESVIKSSKTADTAFDKWLYKNFVVPYNIQIQWRYEDNESDMSYYDVPADSAQSVELAHIIKYTCVEAYTEAAGIDFTRRYFPKLFSFLGEFEYENSGSQKLGTAEGGKKIRLLGVNYIDKYKTNRPLLDEYFLKTIHHEFVHIVNQTKDYPRDFGKVTPNGYVNDSWSSETYGEGFEKRGFVSAYSQKEEREDFAEMVSTYIISTPAQWNAIIKKATLVDANGDPIKDKETGKPAPQPGVEALEKKLEICKRYYKETFNVDLDKVRDAVIRRENNVVNGSYNLTSLN
>CP023864.1|AUI56095.1|849498_851211_-|hypothetical-protein
MKIKNIIYMGSLMLASVAILASCSDQLDTLPDNRTTLDTPKKIAGLLVTAYPDRTPTLFNEWMSDNTDYMGRDNSLGSRGNDQYFFWQEQTEGGNDSPEQVWMFYYDGVYKANEALAAIEEQGGAKNEQLSNSKGEALLLRAYNHFILSNEFCRPYNGKTSQTDPGLYYATGIADFTAAAEQSNRGTVADFYAKIAADIEAGIPLINDTYEVPKYHFNKQAAYAFATRFYLYYEKWEKAKEYADKLLGSNPAAYLRDYKTLQAMPLSNSDQAVKIAEAYCSASAGCNLLVQTSVSSAGMALAPWVSNKRYTLTNYLANTELFMSNNIWGSAANTIWKPFTANQGEANFALLMKLPREVQIINTTTGTVFLRTLNVDFTMDEALLNRAEAEIMLGQNDAACADMNTWMHNYFNTSVTLTPSSVQAYFNSVPYAYADADKMVPSFKKHISPRFAIDAEGSVQESLLQCLLNFRRIETVHQGLRWMDIRRYNIEIPRRLIGADGKPSKNLDWLEKDDPRQTVQIPQSIREAGVEGNPTKTAVPNAILVNPSAYSGPGFSVVNQYPAQAGAHTF
>CP023864.1|AUI56096.1|851366_854675_-|SusC/RagA-family-TonB-linked-outer-membrane-protein
MEKRFTLFLFGLLLSLGTAFGQTKINGTVVSQDDGEAVIGASVMVQGTTTGTVTDIDGHFTLDVPAGKKLVVSYIGMVTQTVAAKDGMKVVLSNDNHQLNEVVVTGMTQQDKRLFSGAATKIDASKAKLDGMADVSRSLEGRAAGVSVQNVSGTFGTAPKIRVRGNTSIFGSSKPLWVVDGVIMEDIANVDASSLSSGDAKTLISSAIAGLNADDIESFQILKDGSATSIYGARAMAGVIVVTTKKGKAGQSHLSYTGEYTLRLKPSYKNFNIMNSQDQMEIYRELEKKGYLNYAEIANASTSGVYGRMYQLISEYDATKGQFGLENTQAARDAYLRAAEYRNTDWFDQLFSSSIMHNHSVSASGGTDKGQYYASLSAMYDPGWYKSSRVQRYTGNINTTYNINKQIGLNLIANASYRKQRAPGSLSRTIDPTTGAVSRAFDINPYSYSLNTSRTLDPNESYTRNYAPFNIFNELDNNYMDLNVHDFRVQASVDYKPITKVKLTALIAVKSAASSMEHIVRENSNQALAYRAMSTTTIRDANPYLYTDPDNPFALPESILKEGGILDRTGNNFFGWDTRLSAAYNDVFNDTHIVNLYAGVESNSVDRKATFDREWGMMFDAGEIAKLNYRAFKMFQEQGSNYYGLSNTHIRSLAYFGTGTYSYKGRYQVTGTFRYEGTNYLGKATSARWLPTYNVSGAWNAHEEGWFSKLFKQALTHATLRLSYSLTGDRPPVTNSLPIFTATVPWRPFTSIQETGYDEEFGNSNLTYEKKREFNLGFDFGFLDNRINLTSDFYWRRNSDLIGYVNHPQLGSYNLANVASMKSNGVEFSLNTQNIKTKDFSWETNFIFSWTHNEITSLFTHARVVDLVQGTGYSLVGYPANSIFSIPFAGLDGEGLPTYMNENGRRTVSDLNLQERDQEKIKYLKYEGPAEPTTTGSFGNVFRYKNWDLNVFVTYSFGNKVRLNHIFNNRYDDMDALPKEFRNRWAYSGDEAVTNIPVIASRRQNRNNTQLDIAYNAYNYSDVRIAKGDFIRMKEISLGYNFPATMIRSIGVSSLGLKLQATNLFLFYSDKKLNGQDPEFFNTGGVAAPVPKQFTLTLRLGL
>CP023864.1|AUI56097.1|855960_858441_-|ferrous-iron-transport-protein-B
MKLSELKTGETGVIVKVSGHGGFRKRIIEMGFIKGKTVEVLLNAPLHDPVKYKIMGYEVSLRHSEADQIEVLPDTVDPAQVEDVEYEESEQSAGSTSYDSTDKELTPEKLSDAVEQKSRTINVALVGNPNCGKTSLFNFASGAHERVGNYSGVTVDAKVGHASFDGYEFNLVDLPGTYSLSAYSPEELYVRKQLVDKTPDVVINVIDASNLERNLYLTTQLIDMHIRMVCALNMYDETEQRGDHIDAQKLSELFGIPMIPTVFTNGRGVQELFRQIIAVYEGTEDESLKFRHIHINHGHEIEHGIEEMQEHLKKYPELYRRYSTRYLAIKLLEHDKDVEQLISPLGDSVEIFKHRDTAAARVKEETGNDSETAIMDAKYGFINGALKEANYSTGDKKDTYQTTHVIDHVLTNKYFGFPIFFLVLLVMFTATFVIGQYPMDWIEAGVGWLGQFVSTNMPDGPVKDMIVDGIIGGVGAVIVFLPQILILYFFISYMEDCGYMSRAAFIMDRLMHKMGLHGKSFIPLIMGFGCNVPAVMATRTIESRRSRLVTMLILPLMSCSARLPIYVMITGSFFALKYRSLAMLSLYIIGVLMAVVMSRLFSAFVVKGEDTPFVMELPPYRFPTWKAIGRHTWEKGKQYLKKMGGIILVASIIVWALGYFPLPDDPNMGKQARQEQSYIGRIGKTVEPVFRPQGFSWQLDVGLLSGMGAKEIVASTMGVLYSNDDSFSDDSGYSSEVGKYSKLHNLITKDVATMHHVSYEEAEPIATLTAFAFLLFVLLYFPCVATIAAIKGETGSWGWALFAAGYTTALAWIVSAVVFQVGMLFI
>CP023864.1|AUI56098.1|859156_861808_-|hypothetical-protein
MKSRNSKFVLKAVLIGLAAFVVTACTDSDTAQEAPKKVEDGISFAVTDIQNISESSLPKTKAPSVYETASTALEGEGAEGLSLLETTVEGVNPVYYPAPTRGTITTNDNFAGLKKPFAIFATKEGSTVANYLYNEKVNVDGTMVNPVKWKKSESSKLKFFAVHPATDGSNPLVTTSSGTNPVVNYAPNTDVKKQFDLLVANTNPFNYDDYVSQKIPIAFSHATTAVLFKVGNELTYKQKVKKIEIKNVIGDGTYDIATNAWTVGTTKKTFELDLSTAPFSTATNAGSIMNGGDGTFFMVPQDIPDEAYVLITFVSGKTVKANIGGTGKKWVAGTTKTYTISNSKDLDDRTLTLTINAAKNIFDYNETNVPFTVTSYSEVTGSGRPAKAEPWTITKYESSADGTTWTEGKPSMVADMSSESGNGGTSAEARTMTFTNDYHDYKAEREAALKAAHEATGTVDLSKVNGPQETANCYVVSASGKYSFPMVYGNAIKNGATNASSYTSSYPASEHIFNKFWGASEINSPYITGADGAKVLWTSTPDIVSDVTINGSNVEFKVNKDKMKEASVIIGVTKNTLGAYNVLWSWHIWITSKDVIDTSKDYFMREPLGFRHTEWHGTTYEKDRKVRLTVTQTRTGKTAQVEFTQKASALVREGEAMYYQQGRKDPLYPSNGMSLQSTGIDPNGYNRGFLPFWAVRMPLMMARFRTYDPNDSGIGKGEANGDWMWINFSDQSDGTKYYSHAEHATYFNLWDVNNCVGYRNPNAFVKTVYDPSPAGFRVPRLDEFTKINNGNNGKAAFVPAMGILSERNFTITDAGHSYYWSSEKKKGPGTLSSTQQWYGYYGLLAFGVKNGNTTTLGLVRPEHPSSPMFKDMASGANVISIKE
>CP023864.1|AUI56099.1|863000_863423_+|DoxX-family-protein
MKTAELLFPKVESTKASLLLLASRLVFGLTFASHGLEKLQHFTETAAHFPAPFGLSGEVAVGLSIFGELVCGLAFVFGFLTRLALLPMIFTMIVAFTTVHGGSVSGGELAFLYLVIFVLSWFAGAGRFSVDGIIRSKFSH
>CP023864.1|AUI56100.1|863787_864048_-|hypothetical-protein
MLVGEKGLTCVGGKLFSFFRFVLLEMLGVSFSHSGYFFLSRRVFFSLTEGISISHRAHRFNRTFLPTFRAHKIVAPPPTPPPQGWA

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Crispr_ID: CP023864_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_4

889494-889894

Orphan

?:NA

Consensus_repeat	Method
GTCTTAATCCTTGTTCTAATGGAAG	CRISPRCasFinder
GTCTTAATCCTTGTTNTAATGGAAGNTACTCTCGGAG	CRT

5 spacers

The CRISPR arrays of CP023864_4

>merge|CP023864|4|889494-889894|CRISPRCasFinder,CRT
TCTCTAATCCTTGTTATAATGGAAGGTAGTCTCGGAGCGCTTTGTGTGGCACAAAGAAGACTGCAAAGTATTTGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGTTACATTTCCTCCATTCGGAAAGTCATACATGGAAGAGTCTTAATCCTTGTTATAATGGAAGGAACTCTCGGAGTATTTACAATTGGTTCAAAACTCAAAACCTAAAGGAGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGAAGTATGGTGTATTTAGAACAGAAAGTTTATCCGAGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCAGAGGTAACGAGACGGTAACCGTCTCTTCTATTCGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAG

>CP023864|4|3|889494-889882|CRISPRCasFinder
TCTCTAATCCTTGTTATAATGGAAG	GTAGTCTCGGAGCGCTTTGTGTGGCACAAAGAAGACTGCAAAGTATTT
GTCTTAATCCTTGTTCTAATGGAAG	ATACTCTCGGAGTTACATTTCCTCCATTCGGAAAGTCATACATGGAAGA
GTCTTAATCCTTGTTATAATGGAAG	GAACTCTCGGAGTATTTACAATTGGTTCAAAACTCAAAACCTAAAGGA
GTCTTAATCCTTGTTCTAATGGAAG	ATACTCTCGGAGAAGTATGGTGTATTTAGAACAGAAAGTTTATCCGA
GTCTTAATCCTTGTTCTAATGGAAG	ATACTCTCGGAGCAGAGGTAACGAGACGGTAACCGTCTCTTCTATTC
GTCTTAATCCTTGTTCTAATGGAAG

>CP023864|4|2|889494-889894|CRT
TCTCTAATCCTTGTTATAATGGAAGGTAGTCTCGGAG	CGCTTTGTGTGGCACAAAGAAGACTGCAAAGTATTT
GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAG	TTACATTTCCTCCATTCGGAAAGTCATACATGGAAGA
GTCTTAATCCTTGTTATAATGGAAGGAACTCTCGGAG	TATTTACAATTGGTTCAAAACTCAAAACCTAAAGGA
GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAG	AAGTATGGTGTATTTAGAACAGAAAGTTTATCCGA
GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAG	CAGAGGTAACGAGACGGTAACCGTCTCTTCTATTC
GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAG

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56107.1\|880877_884417_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|375012
CP023864.1\|AUI56106.1\|878929_880630_+\|transporter	unknown	unknown	gnl\|CDD\|179654
CP023864.1\|AUI56121.1\|902875_903568_+\|(d)CMP-kinase	unknown	unknown	gnl\|CDD\|234579
CP023864.1\|AUI56117.1\|898722_899667_-\|type-IX-secretion-system-membrane-protein-PorP/SprF	unknown	unknown	unknown
CP023864.1\|AUI56698.1\|869610_871209_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56104.1\|871208_873584_+\|peptidase	unknown	unknown	gnl\|CDD\|173804
CP023864.1\|AUI56119.1\|900671_901646_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|376322
CP023864.1\|AUI56112.1\|888783_889452_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56120.1\|901946_902759_+\|TatD-family-deoxyribonuclease	unknown	unknown	gnl\|CDD\|223162
CP023864.1\|AUI56114.1\|892098_893853_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|185760
CP023864.1\|AUI56109.1\|885158_885803_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|225525
CP023864.1\|AUI56113.1\|890065_890551_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274317
CP023864.1\|AUI56116.1\|898101_898641_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234747
CP023864.1\|AUI56110.1\|886369_886918_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236642
CP023864.1\|AUI56111.1\|888192_888618_-\|CHAP-domain-containing-protein	unknown	unknown	unknown
CP023864.1\|AUI56105.1\|873700_877414_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275380
CP023864.1\|AUI56115.1\|893868_896898_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
CP023864.1\|AUI56118.1\|899808_900606_+\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|367555
CP023864.1\|AUI56108.1\|884443_885169_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|225107
CP023864.1\|AUI56122.1\|904138_904849_+\|glycosyl-hydrolase-family-25	unknown	unknown	gnl\|CDD\|119375

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56107.1\|880877_884417_+\|ATP-binding-protein	gnl\|CDD\|375012	pfam17139, DUF5112, Domain of unknown function (DUF5112). This domain is frequently found upstream of family HATPase_c pfam000251.	2.01848e-134
CP023864.1\|AUI56106.1\|878929_880630_+\|transporter	gnl\|CDD\|179654	PRK03818, PRK03818, putative transporter; Validated.	0
CP023864.1\|AUI56121.1\|902875_903568_+\|(d)CMP-kinase	gnl\|CDD\|234579	PRK00023, cmk, (d)CMP kinase.	1.09295e-117
CP023864.1\|AUI56104.1\|871208_873584_+\|peptidase	gnl\|CDD\|173804	cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins. GSP (germination-specific protease) converts the spore peptidoglycan hydrolase (SleC) precursor to an active enzyme during germination of Clostridium perfringens S40 spores. Analysis of an enzyme fraction of GSP showed that it was composed of a gene cluster containing the processed forms of products of cspA, cspB, and cspC which are positioned in a tandem array just upstream of the 5' end of sleC. The amino acid sequences deduced from the nucleotide sequences of the csp genes showed significant similarity and showed a high degree of homology with those of the catalytic domain and the oxyanion binding region of subtilisin-like serine proteases. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	1.29316e-21
CP023864.1\|AUI56119.1\|900671_901646_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|376322	pfam00348, polyprenyl_synt, Polyprenyl synthetase.	1.51043e-92
CP023864.1\|AUI56120.1\|901946_902759_+\|TatD-family-deoxyribonuclease	gnl\|CDD\|223162	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair].	1.17483e-85
CP023864.1\|AUI56109.1\|885158_885803_+\|ABC-transporter-permease	gnl\|CDD\|225525	COG2978, AbgT, Putative p-aminobenzoyl-glutamate transporter [Coenzyme metabolism].	2.69035e-06
CP023864.1\|AUI56113.1\|890065_890551_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274317	TIGR02826, hypothetical_protein, anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of radical SAM enzymes related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	4.14322e-66
CP023864.1\|AUI56116.1\|898101_898641_-\|hypothetical-protein	gnl\|CDD\|234747	PRK00398, rpoP, DNA-directed RNA polymerase subunit P; Provisional.	0.00168989
CP023864.1\|AUI56110.1\|886369_886918_-\|hypothetical-protein	gnl\|CDD\|236642	PRK10030, PRK10030, YiiX family permuted papain-like enzyme.	4.19162e-48
CP023864.1\|AUI56114.1\|892098_893853_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|185760	cd08977, SusD, starch binding outer membrane protein SusD. SusD-like proteins from Bacteroidetes, members of the human distal gut microbiota, are part of the starch utilization system (Sus). Sus is one of the large clusters of glycosyl hydrolases, called polysaccharide utilization loci (PULs), which play an important role in polysaccharide recognition and uptake, and it is needed for growth on amylose, amylopectin, pullulan, and maltooligosaccharides. SusD, together with SusC, a predicted beta-barrel porin, forms the minimum outer-membrane starch-binding complex. The adult human distal gut microbiota is essential for digestion of a large variety of dietary polysaccharides, for which humans lack the necessary glycosyl hydrolases.	9.22399e-23
CP023864.1\|AUI56105.1\|873700_877414_+\|hypothetical-protein	gnl\|CDD\|275380	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	2.13827e-13
CP023864.1\|AUI56115.1\|893868_896898_-\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
CP023864.1\|AUI56118.1\|899808_900606_+\|energy-transducer-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	7.05581e-13
CP023864.1\|AUI56108.1\|884443_885169_+\|DNA-binding-response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.07975e-18
CP023864.1\|AUI56122.1\|904138_904849_+\|glycosyl-hydrolase-family-25	gnl\|CDD\|119375	cd06413, GH25_muramidase_1, Uncharacterized bacterial muramidase containing a glycosyl hydrolase family 25 (GH25) catalytic domain. Endo-N-acetylmuramidases are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.	6.91104e-52

>CP023864.1|AUI56112.1|888783_889452_-|hypothetical-protein
MGEQLDYSFQHYGDFGWSFLFLVPLLIIVVLVLYVIIYLINIGVKNKLLKRGLITILLISLVIPFLRLGLVKSHNRDGSITIPKFQKEIIKSKTKNMSKDEIIDYSIELTAETLKFSDKCSPVTFKKETNAHCVLYAKVLASVCNYAFQVNHIDATAYPVVGDVTFAGINLCSLVSSIFSFNNRLKNFTKDHDFVEIKSPNSDIYVDACIYDLLNVSIKQRN
>CP023864.1|AUI56111.1|888192_888618_-|CHAP-domain-containing-protein
MKKILSIVIILISVLVIWSRNFSYNPEKTAVYVTNNALSRSHTCCAWFVMRAMQAGGCPIGIYPAYYYSKVLPKYGFKVIDTKDYKKGDIIVFPAIKNHIFGHIAIWNGEQWVSDFKQKSMFPASGYRFAKYKIFRYEKNT
>CP023864.1|AUI56110.1|886369_886918_-|hypothetical-protein
MKKKFNTIIMLLLVAIAVYAQHTPRIVNDFKEGDLIFQVSQSNQSPFIQLATNSPWSHCGVIVEKGDKIYVLEASNVVKLTPLKKWISRGKFGKYKRRRVLNKPVKIRYAKYLGKKYDLAFKFNNDKYYCSELIYDIYKNQFGIQLATPKPIKSYHVFGLGKLMKRRGMDPNQKVVAPCDLL
>CP023864.1|AUI56109.1|885158_885803_+|ABC-transporter-permease
MRNKLGYIVLVLLVAQLALILLSWLVTAAFPELSMRSMLSSEGIRWFFGSFVSNQLSPLLIYFIMAVMAVGACVRSRLYDALRETLSNTRSSLTTSSNHQHKVHYREKVGLRIALVEFIVYVIIMVLLTAIPHAILLSVTGQLFPSSFSSSFIPSLSLIIIIMSLTYGVASGTIDSVAKMHKVLVGGLEVGSRLVPTYVVGIQLYMSIRYVFIL
>CP023864.1|AUI56108.1|884443_885169_+|DNA-binding-response-regulator
MEKFRVIIVEDVPLELKGTEGIFRNEIPEAEIIGTAESEVAYWKLIKQNLPDLVLLDLGLGGSTTVGVEICRQTKQTYPNVKVLIFTGEILNEKLWVDVLDAGADGICLKSGELLTRGDVASVMSGKRMVFNQPILEKIVGRFKMSVSGQLMHQEAMVSYEIDEYDERFLRHLALGYTKEQITNLRGMPFGVKSLEKRQNELVQKLFPDGNNGMSVNATRLVVRALELRIIDIDNLHADEE
>CP023864.1|AUI56107.1|880877_884417_+|ATP-binding-protein
MKKARTYGKIQGWVACLLLLLCVACSSPNQKEVDLYNDKAYALHYRNLDSVTIYANKAYNLAKNYDAGKAEALNNLAFVDLMKMRFTAANAKLDSVLKITDNQVELLVADIQLMRLCQRESLNKEFYDYYEKAQKRLHRIEEDEALLSPRQRRRMVYARSEFAIVTSTYYYYVGLEQPSIKAIHQINPDGEIQTDIAQLLAYFYNIGSGGIINTNTQKAIEQKEFEYLIRCYMLARQHNFPYWEANSLQAISELIVNDKSRETLMHNNLPSFQYINLDNMPDSLLAGNLAQRSLHIFQRYGDVYQTAGSYRTLASCYWQIKDYRSAIICLNKALNNNPAIKQAPDLVASIREQLSVTYSAINNKQQSDYNRNIYLDLQDETRQDRYLTSRAEQLENTSQQLNLIIIAVALSIIIVLGSLVLFHYLRRRKDTQGSLDDLLQPLEQWRQQNEQHMAELAEQYEEISEQLDINKLHLTDNKRKNLEQRAKISLVNGVIPLIDRMLHEIERLKKGGESETVKAERYTYIRELTDKINELNAVLTEWIQLRQGRLSLHIESFPVQQVFDIVKKGRMGFYMKGIELRVEHTKAIVKADRVLTLFMVNTLADNARKFTEKGGKVTITSTEAPDYVEIAVSDTGCGLTEEEQQHIFDHKPIHDQKDSSSHGFGLMNCKGIINKYKKISQIFAICEIGVESKKGRGSRFFFRLPKGISRVLLAFLLATASLLTAQARPTRAYDKATALAKKDYTTLAAIYADSAYFSNINGSYSKTLAYADTCRYYLNKRYLQLHPKGKELMKRLGSLSIVPAEIKWYHDSIPLNYGIILDIRNESAVAALALHEWDLYKYNNSVYTHLFKERYADNSLGEYCRMMMKSETNKNVAVALLVLFLLSILPVYYVMYYRHRLVYQFCLERVRQINTILLSDVSEENKLREVEKGVSDRFPERLLAIVNQIKEALVASVEENQKSQSDIELLEDEVRCVEYENERLHISNSILDNCLSTLKHETMYYPSRIRQLVDEADGQLEAIDELAIYYKELYQILSQQAMSQIEAVKLVSRPVDITTLVSPAKLTTAFESPLINGDPVFLAYLFEILYLINNNQPLTVTAEEHQPGYVTLHVIMSTLSLSDDACRNLFQPSADRLMFFICRQIARDNGEATNKRGCGISANETPEGVRIDVVLAKAN
>CP023864.1|AUI56106.1|878929_880630_+|transporter
MDWLIDIFSTAKQDTVAHIVLLYSIVIALGVLLGKIKIGGISLGVTFVLFVGIAAGSIKFTGPLPVLSFLQDFGLILFVFMIGLQVGPGFFESFGKGGLKLNILASVTILLNILVMFACYFIFFDTKDSSSLPMMVGTLYGAVTNTPGLGAANEALHNVFKNGMDFDITSGYACAYPLGVVGIIGATIAIRYICKVNLEEENEKLNEEEAENPNAKPHTMYLRVQNAYIAGRKLKEISEFLNRDFVCTRLMHNNVLSVPTLDNVFELGDEILIVSAEVDAQAIQAFIGPEIEVDWHEEDQPQPLISRRIIITNSSINGKTLGNLHFRSVYGVNVTRIIRQGMDLFAGRNHRFIVGDRIMVVGPEENVNRVAEMMGNSEKRLYAPNIATIFIGIMVGILFGSLPISIPNMPVAMKLGLAGGPLIIAILLGRFGHRIGLVTYTTTSANLMLREMGLALFLASVGIKAGAGFWNTVIQGDGLKYVYTGFLITIIPILIVGTIARMKYKFNYFTIMGMLAGTYTDPPALGYANSICSSEAPAVGYSTVYPLSMFLRIFMAQVIILFFCHP
>CP023864.1|AUI56105.1|873700_877414_+|hypothetical-protein
MKHKFTFLPSFLLLVMAMFWSSLAAHAQDDQQIIKFHTNIPAKAKSSGITAQVSFVLGAKDNATTVSIDCGSGDEEFDVNKTIVENENGEQTMKGSLYTGTVSDDGWVTIKGDPANIYYFNASGNEIDQIEFNDNLKLQVLNLEHNSLKSLNIDKLQSLSVIYLQDNPFTAETPLMIGRMPNLMVLEVPQIGHISPNFTLKNFPKLRSFDAYHTLSLKVADPTECPLLQRLSLDMTSVESVDLSKNPLLQILNVGDSRVKTLDLSHNPEITQLYISHSSGAVNTDVKFETIDVSHCPKLYYFYCGGNNLKELDLRNNPELFTLSCDRNLLRSLDVSQNVNLYSVNVRYNYMDFATLPEPGNWFEYYHEQNPMELNDTYKVGDVIDLSKRVLRKNTRTDARLYRVPKADPTKPVELDDSYYSYEAGKVTLKKALNDQVFVQFTNSRLKDYPIRTENFRIKTVAEFGKDEKAVEMASLGSEGDSVNMSVGILGATAANPVTVKVDLGNGETTPFQIKEERPATPNIATTRTGAGNIIIYVPQDKYVTSLESNGQYIDNIDLSALTELRILTLKNASLTTIDLSYNNKLEKLDLSNNQLRRVDLRGPSSYFNKSNLTDINISHNQIDSLLYYTIYGVTKLNVSHNNLNKLDLKDADNLRMLDISYNKFTRLLLNHSELIEDVNVANNELTEIGIPTVAPVKKLNISGNYFTLANMPNDFGLSRGNFIYAPQHVLQISTSSPGIDLSEQYITKNGAKTQFVWKKKDGTPLQLGTDYTITDGSAKFKNLALDSIYCEMTHAAYPDFEGQNVFKTTYVHPIAFPQYELASFTTLNQTDSVALSLASYVPGKSVYIEWEGNGNVTQYALGETYKLFRAKSKPNTKVRVLVAEPDDKVKVFSISNVKMAEADFTGMKEAKLITVSKAGLTTIKLPVAPNLTDLNLDENELTDVDLSPFPKLFSVSLIGNKIKTFDLSKAPSLNVAYLSSNKMKDIKLDNPMLWNLDLSNNDLESVSLDKLPQLEQLWLNANKLTKVDVSKNTNLRVLNVVGNRLKFSTMPLPSNNGRRFDKYSYNLQAPIDVKCVNGKVDLSSEAVVGGEPTTYRWFDGNVQYVDGVLQGEELATNDEYTVENGVTTLKLSETFTKLVCVMANDNFPNALLHTNYITFTPSAGIDAVSADKDVKIQFYDGAINILGAKNATTAIYTIDGKLVYQAKIADDSTRISLARGTYIVRVGNKAAKISVK
>CP023864.1|AUI56104.1|871208_873584_+|peptidase
MRKFLLTVLSICTAGMAFGQSKLDLQSQLELYKLRNTAIPTYNSRTRAFERPKSVPENTMAMVEMKDQNDRADLEAQGVKVLRVRGNIAIVVAPIKDIERISALKCVRRMELPRRVYQKMDVVRKEIGVDKIHQGVDLPQAYTGKGVVTGIVDGGIDPNHINFLKPDGSTRFGYISKITASQSNKDGYQFDNYYPRAVLDTLTNRDNAYAIEDFTTDSYTTFHGTHTTGIMAGGYKGNITYAKTNDNDKSYKVTGPNPFYGCATESELVASCGDLRDQYIAFGVDDVVQYAQLSGKKPKPCVINLSLGSNIGVHDSTSVMNRFLAEEGKHAIICVAAGNEANMGIALKKDFAAAGETVKTFLTPMQPDSLSSGGKTYYNLRNGQIAAYSNDSTAFDLQIVVTNTKRGNKAAVRIPLQNNTKGQPITYASGGDYSMSGAVINQTFAKAFDGYVTAASMIDPETGRYYAMAQIMTSDNQKDNKDGNYKLALEIKSKKPGQRVEVYSDAQFIYFDSNKQDGFVSGTRNGSISDMACAANIVTVGSYNVRNHWSSLDGFVYGYNKRGDEDDFPEGEASRFSSFGTLADGRNLPHVCAPGASIISSVNTYAVENPDLGYNDMALQGKLEKGGKKYYWHQSLGTSMATPVVAGAIALWLEANPSLTVKDVIRIIQQTARKDNFVTNTGDPVQWGAGKFDAYAGLKQVLKEKETDGINGVRYAESQEVPVITMTGERSFSAFLAGAKQLNLRAYSLSGQLVHSLSAQGDELNVNASSWNKGVYLIQVNGGKAQRIVIY
>CP023864.1|AUI56698.1|869610_871209_+|hypothetical-protein
MKQVYAYLFLVLLVFSSVNAKADTPVKINIDDVNKVTVKVNYVPVADLTNGTNTVNVPQYASLSIEAKEDYYLKDVTKQGKDGAVIAQNISNLTSCNIYLSDADKNILIKVKSGVLADVRTGSCSVKVDNAPKVRVSRYESHTSVALQNGENIVKWIPNTEKTLVITNANYSDAPIYKVTVDGNDVASSGGQYFVTLTSGCVVDIKADYPDISYPVKFNFSNEVAKGIISKVMADGKEVKNYNDADFKLKAGTKLSLTFDQNNYALDAFKVNGTAVTIYGNYECYVKDNLVFDVQAHKYATVKAVLTVDNAANITAYEGQSYNNKVITLQNGSNNIELGEKNNLIQIKPNSGCKVESIKANGTPVTANYDGAYEIRLTEGMTIEVTTSAIVRDQKAIVVIDDISLANYGFNFYRSDHSTVKMQTGENTVMFSADDHHFMLGAYGNDLSKMVVKLNGTKLNPPYPGGTSFEFDLKNGDRLEVLLKGDTAGIDAIEAVKQGKAVVYRLDGTRVEGSQLPNGVYVINGKKIIIKK
>CP023864.1|AUI56113.1|890065_890551_-|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MLHYINTDIVFQEFPDEVTLAINVSGCPCHCPGCHSQFLWADRGHDLTTEALSALIHEAKDTITCVGFMGGDGDPAEVDRLAEHVRQNHEGLKVGWYTGRTAISPLIDQQRFDYIKVGPYLRHLGALDSPRTNQRMYRRCPDGSFEDITSRFWKHQVGTNL
>CP023864.1|AUI56114.1|892098_893853_-|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKKIYLLLLAAITMVSCSVERHPEYMMDEDAMTKNIDESFPALLKGCYGYLKTWSDPMYRCGEYAGDNIMIRGTSTDAFYEFISYSRTPNNYRLQNFWDFSYKVVAQASNIIKAIPEGKNTTTDTQLGECYYLRGMIYFYLCRAYGRPYAQNPEKNLGMPIVNGTPDDPANAVLPNRSTVKETYEQAISDLEKAASLMTEDIHGEEHCIFASKEAAWAMLSRVYLYMSGTYKNPNTAYAQKSVEYATKVIDSGKFSLLSRKDYGVSNTLEPENNPENIFVVKRVDSEFPGWDYYYTIGGMYSNIGGKGWGEMYASAKYLDLLNETGQNDWFNKKYTDIRAQFIEPQYVKDKTDKYVPVFRFIKNVYDASGNQVNFNYVQLRYTRQPDNSLTCDTTGTGHTTPLVLTPIDPAQRLYSINYQGHTYRGVLDYQMKLNRVYPMFYVVKCSRQGGKENQLYSPVISRLDEMYLNRAEANVKLGNISSAMADVNTIRERAIVGGSYTSAQFTAATAKTLVDKERQLELAFEAERSYDVFRNGDTLTRRFPGPHQPMVDIPATDYRVIYFIPQSAINAYKGNLEQNPRSN
>CP023864.1|AUI56115.1|893868_896898_-|TonB-dependent-receptor
MRTMRKTNLGRSLLLVVPLMCSPYVVQKACATHAMMIQAQTSIIKGKVVDSQSGEPIISASITVNGTKKMTITNIDGEFSIDAQVGDELVVTSLGYEKKTVKAAENMTISLVATSTMLSETVVVGYSTQKRNSLTGSLKSIDNKELTNVTTANVTNMLTGKIPGMNVMPGSGKPGSFGAIIVRGKSTINGSTAPLWVIDGVIVGKDPGDINPNDIESLTVLKDAASTAIYGSQGANGVIVVTTKSARAGKTSITFSAKMGLSTLNNGKVKMMDGADLYDYYKSFTNAAEIAFPRWNEQLRDSNFDWWKLATHTGNVQNYDLTINSGGDKLSAVFTGGVYKEDGAVRGYDFTRYNTMMKLNFKPFSWIAIRPSLNGSKGVIDDRQRSTYSMYSMLPWDSPYDENGKIVGNRSSAWVNSNSTNYLYELQYNWSKYDSYSFNGNFDFDIYLTDWLTFSSVNSYRWSTHLDKSYVDPRTSGAEDKGRVSESTSTNTRRYTNQLIKATRSFGDYHGFLMLGYEFNDGEYRYHNGSGTGLVPGFAQLDITSTPESVGGNKYEWAVQSFFANLNADYANKYLLQLSLRTDGASNFGSDAAYGTFFSVSGGWVATAEKWFKVPCIDYLKVRASYGSVGSRPNSLYPQYGLYSLGANYNEKPGAVIAQLANRKLTWEKSFTTGVGIDLNMFRRLRMTFDFYHKRTSNLLFAVPISGVIGVTSIWQNIGELTNTGFETTLSADIIKGKDLTWTVDANLSTNSNKIKKLYSGRDQIIVGDGIAGSANTLLRPGLSVDTYYLREWAGVDPETGAPQWYTTDANGERVITKSYAKADQIALDKRATPSVFGSFSTTLTYKNFDFNAVFGYSLGASIYNYSRQEYDSDGAYTDRNQFSLQKGWKRWRQKGDIATHPAAAYNNPSNANKASTRYLESSDFLKLRSLTLGYNFHLKSDVVKALRVYVSGENLFCITDYSGVDPELPAADSGRNASGERSTALSISTGAGVYPSVRKFMLGVNVTF
>CP023864.1|AUI56116.1|898101_898641_-|hypothetical-protein
MRYTVKCNNCGRDFVAETEKYGTMKYRCPYCGNVLTCRFDEPQPIRTHARSVIPLAEASPIVVKKAKNLPTVPTHLLHTPSKEKLAEMRQKLVEASQRAGETLKNATETTTEFVNKSSSRLRRFQEKYADGDLWIFFGFSLAFVLSVLIGLFVCAELVKVIAEGNSWLFKNYIEIRNAI
>CP023864.1|AUI56117.1|898722_899667_-|type-IX-secretion-system-membrane-protein-PorP/SprF
MKKIVFTLLLTLFAAVMRAQESQTEYNFLRLPVSAHAAALGGENISIIEDDPSLMFSNPALASSVSDKTVGLNYMNYMRGAHFMSASYTKALGEKATFAGGVLYMNYGKMKEVDANNVQTGTFNASDIAVEGIFSYELARNLVGGITAKFITSYIGQYNSMAVGVDLGLNWYEPDHQWSVSLVAKNLGGQIKAYEEDYGKMPIDVQLGVSKTFVALPVRVSATLVDMTHYDYRFINHLNLGADILLSESIWIGGGYNFRKADEMTIGTAENASAHGAGFSVGAGINLEQFKLNLAYGKYHAASNSIMVNLGYSF
>CP023864.1|AUI56118.1|899808_900606_+|energy-transducer-TonB
MEIKKSNRADLESKRWVGFLLGIIVALSIFFVAMEYNSSGTEDDSANTKAIKNVTLHDMDMLPAIDQQDLAKTQEDKKPTMEDLLNLKRRDVPNKVTPHDAGSMNSNDKKTGAPQVSEEPIVMPMVTTTPEPPKVKEEAKKEMEKMSDDTSDKVVERYDDKVSKRILSQTPTPPGGWVEFMKWLTKTLQYPADAKDNNLQGTVNITFIINADGTVHDVTVKNGKIPVLNAEALRVLKTMGKWKPGIERNKPCRSLVEIPFVFQLS
>CP023864.1|AUI56119.1|900671_901646_+|polyprenyl-synthetase-family-protein
MYTADEILCKVNEYINNLTYDRKPQSLYDPIKYVLSLGGKRIRPTLMLLAYNLFKDDPETILSPACALETYHNYTLLHDDLMDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMEQCDSRHLREVLHLFTTTALEIGEGQQYDMEFENRNDVKEAEYIEMIRLKTSVLLACAMKIGAILADAPADDVDNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKKIGGDIISNKKTYMLINAFNKANVRQRKELERWIGCENFNHNEKVAAVTALYNSIGVDKMAIERINYYFDEANKYLDAVKVSADRKTELVAYAQRMLHRKR
>CP023864.1|AUI56120.1|901946_902759_+|TatD-family-deoxyribonuclease
MIIDTHAHLDVEEFAEDLPEVISRAREAGVEKIFIPAIDLKSMDTVMAVCRQYPDTCYPMIGLQPEEVRKDWREVLDAMYQRIMLSLKQKEEGTALPGETIIAIGEVGLDFYWSREYEQEQLAAFEEAVKWSVETRLPLMIHCRKAQNEMIHIMRHYEKELPGGVFHCFTGNQREAEAFLRFDRFVLGVGGVSTFKSSHLREDLPAAVPLDRIVLETDSPYMAPVPYRGKRNESAFIVEVMRTLAASYGLDEAEFAQRTNENVRRVFGIG
>CP023864.1|AUI56121.1|902875_903568_+|(d)CMP-kinase
MKKITIAIDGFSSCGKSTMAKDLAKEIGYIYVDTGAMYRSVTLFALRHNLFNADGTIREEELKEQMKDINISFQLNKTTGRPDTYLNGENVENDIRTMEVSSHVSPIATLAFVREALVAQQQRMGAEKGIVMDGRDIGTVVFPKAELKIFVTASAEVRAQRRYDELKAKGMDADYADILKNVEERDYIDSHRATSPLRKADDAIELDNSNLTIAEQKKWLYEQYRKAAEE
>CP023864.1|AUI56122.1|904138_904849_+|glycosyl-hydrolase-family-25
MKLIRVIFLIACIFSFAGTKAQYTIQCEDTCSHIHGLDMSHYQGDVWWETVAENSNHKLNYVYLKATEGGSRIDQRYLDNIEAAQRYGMNVGSYHFYRPTVPQEEQLRNFRMQCRPQDQDLIPMVDIETTGGLGREALCDSLQRFLVLMTKEYGVKPLVYTYTNFYDRYLSGALDGYKLFIAQYNGREPVLQDGRDIFAWQYTGKGRINGVNGYVDKSRLMGRHSMRELRFPRRRR

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Crispr_ID: CP023864_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_6

1035684-1035825

Orphan

Consensus_repeat	Method
AACACCACTGCCGACTTTGAAGTCAAGGTTGCCTCGCTATCAAGAAAGGATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_6

>merge|CP023864|6|1035684-1035825|CRISPRCasFinder
AACACCACTGCCGACTTTGAAGTCAAGGTTGCCTCGCTATCAAGAAAGGATGAAAAAGGCAACCCAATAAAGTGATAACAAGGTGAGTAAACACCACTGCCGACTTTGAAGTCAAGGTTGCCTCGCTATCAAGAAAGGATGA

>CP023864|6|4|1035684-1035825|CRISPRCasFinder
AACACCACTGCCGACTTTGAAGTCAAGGTTGCCTCGCTATCAAGAAAGGATGA	AAAAGGCAACCCAATAAAGTGATAACAAGGTGAGTA
AACACCACTGCCGACTTTGAAGTCAAGGTTGCCTCGCTATCAAGAAAGGATGA

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56220.1\|1058131_1059004_-\|RNA-polymerase-subunit-sigma	unknown	unknown	gnl\|CDD\|223642
CP023864.1\|AUI56218.1\|1052638_1054186_+\|sulfatase	unknown	unknown	gnl\|CDD\|293755
CP023864.1\|AUI56211.1\|1033139_1034546_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56210.1\|1031666_1033124_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56215.1\|1047000_1048614_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|369630
CP023864.1\|AUI56213.1\|1037397_1038927_+\|carbohydrate-binding-protein	unknown	unknown	gnl\|CDD\|226195
CP023864.1\|AUI56207.1\|1024197_1024875_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|225439
CP023864.1\|AUI56219.1\|1055567_1057955_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
CP023864.1\|AUI56203.1\|1020586_1020841_+\|DUF3883-domain-containing-protein	unknown	unknown	gnl\|CDD\|379021
CP023864.1\|AUI56712.1\|1049859_1050798_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
CP023864.1\|AUI56216.1\|1051189_1051654_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56217.1\|1052064_1052256_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56214.1\|1038936_1041255_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56208.1\|1025252_1026734_+\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236327
CP023864.1\|AUI56209.1\|1026870_1027806_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56205.1\|1023618_1023831_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56711.1\|1043849_1046978_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
CP023864.1\|AUI56710.1\|1029241_1031650_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
CP023864.1\|AUI56204.1\|1021226_1022924_+\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
CP023864.1\|AUI56206.1\|1023991_1024222_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56220.1\|1058131_1059004_-\|RNA-polymerase-subunit-sigma	gnl\|CDD\|223642	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription].	5.18423e-81
CP023864.1\|AUI56218.1\|1052638_1054186_+\|sulfatase	gnl\|CDD\|293755	cd16031, G6S_like, unchracterized sulfatase homologous to glucosamine (N-acetyl)-6-sulfatase(G6S, GNS). N-acetylglucosamine-6-sulfatase also known as glucosamine (N-acetyl)-6-sulfatase hydrolyzes of the 6-sulfate groups of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate. Deficiency of N-acetylglucosamine-6-sulfatase results in the disease of Sanfilippo Syndrome type IIId or Mucopolysaccharidosis III (MPS-III), a rare autosomal recessive lysosomal storage disease.	0
CP023864.1\|AUI56208.1\|1025252_1026734_+\|proline--tRNA-ligase	gnl\|CDD\|236327	PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional.	0
CP023864.1\|AUI56219.1\|1055567_1057955_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.89017e-17
CP023864.1\|AUI56213.1\|1037397_1038927_+\|carbohydrate-binding-protein	gnl\|CDD\|226195	COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate transport and metabolism].	9.32146e-31
CP023864.1\|AUI56207.1\|1024197_1024875_-\|OmpA-family-protein	gnl\|CDD\|225439	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].	3.85061e-28
CP023864.1\|AUI56203.1\|1020586_1020841_+\|DUF3883-domain-containing-protein	gnl\|CDD\|379021	pfam13020, DUF3883, Domain of unknown function (DUF3883). This is a domain is uncharacterized. It is found on restriction endonucleases.	8.16245e-13
CP023864.1\|AUI56712.1\|1049859_1050798_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	9.27633e-67
CP023864.1\|AUI56204.1\|1021226_1022924_+\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
CP023864.1\|AUI56215.1\|1047000_1048614_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|369630	pfam07980, SusD_RagB, SusD family. This domain is found in bacterial cell surface proteins such SusD and SusD-like proteins, as as well RagB, outer membrane surface receptor antigen. Bacteroidetes, one of the two dominant bacterial phyla in the human gut, are Gram-negative saccharolytic microorganisms that utilize a diverse array of glycans. Hence, they express starch-utilization system (Sus) for glycan uptake. SusD has 551 amino acids, and is almost entirely alpha-helical, with 22 alpha-helices, eight of which form 4 tetra-trico peptide repeats (TPRs: helix-turn-helix motifs involved in protein-protein interactions). The four TPRs pack together to create a right-handed super-helix. This is predicted to mediate the formation of SusD and SusC porin complex at the cell surface. The interaction between SusC and TPR1/TPR2 region of SusD is predicted to be of functional importance since it allows SusD to be in position for oligosaccharide capture from other Sus lipoproteins and delivery of these glycans to the SusC porin. The non-TPR containing portion of SusD is where starch binding occurs. The binding site is a shallow surface cavity located on top of TPR1. SusD homologs such as SusD-like proteins have a critical role in carbohydrate acquisition. Both SusD and its homologs, contain about 15-20 residues at the N-terminus that might be a flexible linker region, anchoring the protein to the membrane and the glycan-binding domain. Other homologs to SusD have been examined in Porphyromonas gingivalis such as RagB, an immunodominant outer-membrane surface receptor antigen. Structural characterization of RagB shows substantial similarity with Bacteroides thetaiotaomicron SusD (i.e alpha-helices and TPR regions). Based on this structural similarity, functional studies suggest that, RagB binding of glycans occurs at pockets on the molecular surface that are distinct from those of SusD.	1.79719e-57
CP023864.1\|AUI56711.1\|1043849_1046978_+\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
CP023864.1\|AUI56710.1\|1029241_1031650_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.99923e-38

>CP023864.1|AUI56211.1|1033139_1034546_+|hypothetical-protein
MNKIVKNILLLSCLAVVFASCDDFVFGNVHVDYNENPLESKGLARSGADRYVDSLSKIKVSEQVNNPDPDGAFNGWATCLAMFKEGHSHGDGMMHGNFVYHNAPWKQEEFVIIRNNTAKWPTVEVQRQSTVTYLEQSDGKTGPDYIRIIGGKLKRWGLCLYFFNKEGKLMNDDILDHSDEYQIFFTVSEVDDKGNPYEVMDCRGTWKPKKNKFGDWKKGGTIDTTPVPSPFFANTTTWKERAERTPKIFEYTYRDTWIHNAMADGARELFNQRLLPPLTREDADWAVAPYDQDRVGLKGHFNFDIEADENDALHEEWPLEITRRLDPATGETGHYTRPSYLLPKFYLSVRVMKCPKGKKALIPKDEYLSRHSTYVFRSPYICSEAYNPDEPKEYGADSEWKELFRFNIPIKVFCSSFDTDPTTIDPNDPLYFYLGHEIGLSPLDALEASQNVQTHGIGGGSGFGNWFL
>CP023864.1|AUI56210.1|1031666_1033124_+|hypothetical-protein
MKLYKDIRLILATAAVGLVFGSCSNDQVDDFFKKIIQAPPSSIERDVKGHEQIYAVHAILRMGYKGGMIGVGPDGNDSIQAYNTYHLVSSSTSIPVMQEIDIAKDDDGQMTITTERDCFDVIASDDIYYGLELKYYDQNGMLINHQFSGYPFMKDKEGYNVPDEDNATLLVHQHFFGIGNASLDKLVADSTSSGHEKAVQGMQMAYPRSLASIPTYYDRYTFKEQGGAMEAATKFSTSNIYVPDGYTFGLNQVPFNSELAWRAIEVSGKPEALQPFTFGGKTYHLYKTIDPMELNKITPEVFTYEYRDTDPVEEELGKLFTEAYNDDFTDPDTEAPRQRYGHTVGLLHQKRSLDVGSDLDRLGFKGVMQFHKSDIAFQLQVRICHILNKGQQHVGESEKPAKYCNTNNSEHSFLWDFNQLQPGWDSFDIDYPLSVRVIANTKDGEDKCFEDVKRFYPAANKAQLWRMLTRPQDFFTQYRQNVVLM
>CP023864.1|AUI56710.1|1029241_1031650_+|TonB-dependent-receptor
MNYERRARYYLSATLLSSLFLFPPTYVHATSVHGQETVEDEDKDVKTSVTVRVVSEQSQEPLIGAVVRCEGVSNPSVTDIDGKCTIKLKRAADRIKLTVTYVGYKSVTRVVNVPDSRMITLQLKDDSKQLDNVTVTALKRHTTVLQQSSAISQEALEKGGATSLAKLLETIPGVSSISTGNTIAKPVIQGMHSSRILLMNNGVRLESQSWGADHAPELDYTGSSMVEVVKGAECIRYGFGAMGGVVLLNDAPLPYENKKIKVNGNVNVGYDTNARGFSGSGTVETGYKQFGLRLHGMYTKGGDYHTADYVLNNTGYNTISFSALAGWQGRKLTATLFSSIYYQRSGIYYASKISDLSQLIKRFEYGRPDPETVKPFSYDIKPPFQQSQHVTLKGELKWELNPNHHLNLTLSFQENLRQEFENRKKTQWSWIPMQDLILKTYKFDVLWQAKWKLWKMTTDAGLSNTYQTNFNYPGTKQPAFVPNFAALSMGGYFLHKAEFGRLQCALGMRYDFRVLSVNGYSSLSNYTYYDDFKLYSNFTMSLATHYQFSDKWDARANIGWSWRPPDINELYAIGLQDGSYWVVGNKNLASERGYKLVLGTKYRNTWFSVEPSFFFQRINSYIYDHIGEGKDRFHNHPSGKYPKFIYDQDDVKLYGGDIEATVKPVRGLTFVGKGEWMFARNLTHNDWLPFMPSDRYGLSATYELPLKKPQKYRSSLSLSGIYVTKQTRFDPDKDLVPDSPPAYFLLNGTAELRIGLPQNKELKFMIVGDNILNALYKEYTDRFRYYAHERGANFSLRTLFKF
>CP023864.1|AUI56209.1|1026870_1027806_+|hypothetical-protein
MKKSLLTFVFLLALTALNAQTLIKAKFQKGEQATYSTVSEAKLSTPMGGGDQSLKTSSNTVITVKEANADGYVIELKTKDVKTEGDQSTALQTQTIVSQYFGNVPMRVKTDANGKVTDILNFEEVQASVSKLVMAFIDSIYKEKPQLEQSLPKYKMAMSLNNMLTKQTFIEIMEHSTFFNLFGKTLKTGDKEDVNQQGIKSIVTYEVTKEPNELVIIGKTQNNMSEDDVKGFLIDKMKLMGSDESMIAKFEQGWLMMKKMGLTKMDGAGTITTRLLPSGWATEYSSSIKSKVMGAVMTTNSVSKLVGHNWK
>CP023864.1|AUI56208.1|1025252_1026734_+|proline--tRNA-ligase
MAKELKELTKRADNYSQWYNDLVIKADLIEQSAVRGCMVIKPYGYAIWEKIQAQLDKMFKETGVQNAYFPMLIPKSFLSREAEHVKGFAKECAVVTHYRLKATEDGNAVQVDPNAKLEEELIIRPTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMRTRPFLRTSEFLWQEGHTAHATREEAEKEAQTMLRVYADFAEKWLAVPVVQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPKIAPIQVVIVPIFKGEEQLKELTAKLQPVIDQLRELGITVKYDDTDNKRPGFKFADYELKGVPVRLAMGGRDLENNTIEVMRRDTLEKESLSFDGIVEHIKNLLDDIQANIFKKAKDFRDAHIYECENYDEFKERVKDGGFFLCHWDGTEETEAKIKEDTQATIRCVPYMFEQTPGVDMVSGKPAKYRVIIARSY
>CP023864.1|AUI56207.1|1024197_1024875_-|OmpA-family-protein
MKNMKMMAAGMCLLTVVSCQTKQGTGSLIGGGAGAALGGIVGQIIGHNGKSTAIGAAIGGAVGAGAGALIGRHMDKVAREASQQLPNARVDKVTDANGLDCVKVTFDSGILFPLNGSNLSASAKNDLTKFASLMQRNSNCDVAIQGYTDASGNDNINVPLSQRRAEAVSSYLKGRGVSSRQIRSVQGFGSANPIENKTISQANRRVEVYLYASSEMVRQANNGSL
>CP023864.1|AUI56206.1|1023991_1024222_+|hypothetical-protein
MFLKHEGHILDSSMAKTLYIFVGNKHGVSPLLFQRKRDTASAISLRKDFISKVYWDRRETTVPLYLLITYKEPLFA
>CP023864.1|AUI56205.1|1023618_1023831_-|hypothetical-protein
MRFCQVFSRTQEIYWVLYFSQIFTDEQKPFSEQGEHAEKWWPLPVPSWPLPLPLPKREGRDHRDTPIEWM
>CP023864.1|AUI56204.1|1021226_1022924_+|energy-dependent-translational-throttle-protein-EttA
MATVDDKKIIFSMVGVSKIIPQNQKQILKNIYLSFFYGAKIGIIGLNGAGKSTLMKIIAGLVEPTQGEVVWSPGYTVGYLPQDPPLDEAKTVKENVMEGVQHIYDALKEYDDINVKFGMEEYYSDADKMDKLMQRQAELQDIIDATDAWNIDSRLERAMDALRCPKGDLPVTNLSGGERRRVALCRLLLQKPDVLLLDEPTNHLDAESIDWLEQHLQQYEGTVIAVTHDRYFLDDVSEWILELDRGEGIPWKGNYSSWLDQKTKRMEQEEKSASKRRKTLERELEWVRMAPKARQAKGKARLNSYEQMLNEEQKQREEKLEIFIPNGPRLGNKVIEAQHVKKAFGEKVLFNDLNFMLPPNGIVGVIGPNGAGKTTLFRLIMGLEQADGGTFEVGETVKLAYVDQQHKDIDPNKTVYDVVSQGNDTIRMGGRDINSRAYLSRFNFSGTDQSKLCSVLSGGERNRLQLAMALKQEGNVLLLDEPTNDIDVNTLRALEEGLEAFAGCAVVISHDRWFLDRICTHILAFEGNGEVVFFEGGFSDYEINKARRLGNEEIKKGRYRKLMEE
>CP023864.1|AUI56203.1|1020586_1020841_+|DUF3883-domain-containing-protein
MLSIEDDGKTPRYIEVKTTTGSMDTPFYFSATEMRFSREHKEHYYLYRVYILKQSGQQADVTLLHGSLEGLSADPTCYQAKVEL
>CP023864.1|AUI56213.1|1037397_1038927_+|carbohydrate-binding-protein
MNNRFLHGVLTALALTATATSFAQNPTVMTLQTQVAPNPENEPRPVFPVPSDRQWQWQQTEFYAFFHYGMNTYVNEEWGKGNESPNSFAPTEKPDPRQWLEAVQAAGMKGGIAVVKHHDGFCLWPTASTDYNISHSSSPNAQGVNIAELFAKAAQELHMKYGFYVSPWDRNNGQYGTDSYVKDVFLKQCAELAKYGSDQFEMWFDGANGGDGYYGGKNTTIHIDRSTYYDVPNLRDSIHKLSPNIILWGVGGEARWIGNEDGWAGETNWCNENRGVAPERNGMYGTENGWFWLPGESDAKFTNPGWFWSQKSKPMTAERTFQMYLETVGRNSTLILNCPPDRSGKLPQDQVSRLKEFGKMLKSRFQTNLAKSATIEASSTRAHGATRSYAANNLIDENPDTYWAAEDDVKDVTLTLKWNNPQTVRYVTLQEYVRLGQRVKSFSVEYTTDGSTWKPLANKVKQTTIGYKRIIPLNGSTANSYGSGYEARAIRIHIKDAKACPVMSEIAIY
>CP023864.1|AUI56214.1|1038936_1041255_+|hypothetical-protein
MRNSMKKNILAACGLLFCSSLLHAQTTDEVRIDFENQDYQAIGVYDTWLKSPFRSHDGQPATLQGNVQVVSNIDKNYDDVLKSTPNASDKVLGFQRSRYGSNTFGARIDLKQPFALTKETKYVHVMIHKPKAGRTMLIGLGKRTDRPGQSADTEQFWEFSTKEIEPNKWVDAVFPVKGAGGIDIHSLVVVVDCEDSNGLKDDFLAYIDNIVVNNEAFTTTNREDYPMNYNKDQKCTRTDRGLKGISLGNQSIAVYGDISSSTPAYTYLSKRAFWAKPGETLTPAVQYKGIWMHSYVYVDLNNNGRFEPKVEAGQIVPDAGNELMAYSFLSASDENSGFNSAGTEISGNGRNTLSMPAFTLPDTLQHGFYRMRYKVDWNSSDAGGSIETNNHIINNGGGAMDIRLNVHGDNVTITQGALNGKVVAADDTELNNLSIPFGQPFTIKMKPEHGFNFNGLRVRHGYNLTGDSLSHGTYQYVDELVPRERFNEDGTFTLPAEMIDGDVSLEGIFIDAKTTLTYEVYFNNKFVYSTAVNGAKTGAVTIPESLNRDFVELSSDTQTVTSLPATVRINAMWTGPMKVATATDTTWYNLKVSSQPKWVSSRTYAPNVYFIDQSDTDKDAALWALTGDPYSGFHLINKAVGPTHVLASASPKGSGNAGGFTFATLESASELPIGYTSGWFLNVSPNDEAGFYICNPEGYGLNYRANNNLAYWTGGKDGGSTFVPTEVKKTSTGISSLTLQQDATTTYDLTGRSVGKNHRGIVIRNGKKLLIK
>CP023864.1|AUI56711.1|1043849_1046978_+|TonB-dependent-receptor
MSNFMKVSKNRRKHPPFVTGSVAFSFALGLMAVAPSPVLANVDANTSMSVQQQKQSINGVVKDVNGEPVIGASVLANGTPVGVTDVDGRFSISVAPGTELKISYVGFATQSLTVRSGVTSYNITLKDENSALSEVVVVGYGTQKKANLSGSVAQLDGKTLENRPISNVSSGLQGLLPGITVTGADGAPGLDNGSILVRGVGTLNSASPYILIDGVEAGTLNSLDPEDIASISVLKDASSAAIYGSKASNGVILVTTKRGQNGAPKVSYSGYFGIQNATALMDRMNSADAAYYYNKALERSGKAPRFSEEAIQKFRDGSDPYNYPNTDWYGLAFKTAWQNRHSVNITGGNEFVKYLASAGYLKQSSILPNAGREQFNGRANIDMVLSKRITAHLNLAYIQNNYRDASSAYAGGSSDQIIRQLNIIAPWIVYKYEDGTYGTVSDGNPMAWLESGMTVNRNNRNFTGMIGLDYQILKDLKLTLQGAYVDASQRYSYFQKFIQYNPNKASDPNKLEIAHYDWHRTTFDAFLNYDKSFAKHNIKAMLGWHTERYKYLPDWMYRKSFPNNDLTDMNAGDASTQQNAGNTRELAMVSYFGRLNYDYAGRYLFEANFRSDASSRFADGHRWGFFPSFSAAWRVSEEPFMEGSKSWLNNLKLRASWGQLGNQDALNDYYPWMNTYNLNAKYPFGGQLTPGYYQGSYHLETISWERSTTWGVGLDFTLFGGLTGSLDYYNRKTTGIIMDVSAPAEFALGAYKDNIGALRNQGVELSLAYAKQLNKDWTINVGANFSYNKNKILYLGEGTEYVVDKDNRNRRTAIGQQYKSYYMYKATGKFFNSQQEADDYTAKYGNPFGRKFMAGDLIYEDANGDGKLDSNDRIYTKHTDIPAITYGFNLGATWKNIDLSMIWQGVGAVSHIYNREVLGEFSGDASHPSTLWKDSWTDDNHNAKLPRVFETGNSPSDMTRAMSTFWLWNTAYLRLKTLQIGYTLPKSTLKAIGLEKVRIYYAGENLLTFDALPFNIDPEVTSERGSSYPLLRSHSIGINITF
>CP023864.1|AUI56215.1|1047000_1048614_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKTVRTYILAGVAAFALTSCNDYLTTVPKDAMSPSTTWKTSDDAEKFLVGCYDGWEDGGALLYWDAGSDFAYNNFPWEGFTNIGNGSLSPSSPGWSFYDYTIIGRCNTFLENVDKCAFSSEAAKKDLIAQVKAIRAYNYFRMGFLYGGVPIVKPFTSAQEARVPRNTEQEVKDLVFKDLDEAIADINTSPAARGRIAKGAALAMKMRAALYWGDYQKAKDAAQAIIDLGLYELDPDYTNLFKLAGKDSKEIILAVQYKSGTRPLSTIGQLYNNGDGGWSSVVPTQKCVDNYEMSNGMTIDEAGSGYDATHPFHGRDPRMAMTILYPGCDWDGTVFNTLDENVNGKKNPNYPTNAANSSKTALTWRKYLDPKTQYADVWDTEASPIVFRYAEVLLTWAEAENELNGPSANVYAMLDKVRTRVGMPAVDQSKYNTKDKLRELIRRERGSEFAGEGLRRADILRWTSNGKMVAETVLNGPLTRVTGTIDNTATDPTMRAVVSGTSKVEDRSFQTYNRYLPIPQWNISDNPKLEQNPGYAK
>CP023864.1|AUI56712.1|1049859_1050798_+|IS30-family-transposase
MYHQLISEQRSQIFALLQKKTARKEIADIVGISQSTLSREIKRNSTPSGKYIWTKAHDMAMQRRKSTVTNAKLSDELVWRIKEYITNDQWSPRQISGYLRMNEGIEVSHQSIYNIIHNDTTGKLAEHTRHKMKYRHRPKGGHLPIKDRVSIHERSKEVDGKRFGDFEMDLIVDPAQHAILTIVEKSTNMLLMQKLPFGKMSKPLAKVVRKLLLPYKNSLKTITTDNGPEFAAHKDITKYLGVPVYFADPYCSWQKGTVENTNKLIRQYIPKKDSFDNYTDKRIMSIQKKLNERPREKLNFSTPKCEFFKHVL
>CP023864.1|AUI56216.1|1051189_1051654_+|hypothetical-protein
MGPVVVDSWLDRGYKIIGKYKLLNPQPLPLTKSDWLFIHKQLPIWVRKHYPNYRHMPTISQLSIDSLKSNTSYQFTLLHDGKLLEEDVYLLSLPSSNVNHPLKIYIPKASVADEKQLTKDGRLVSKPVLVYPFLTEAWERNINETKPYGIGDMW
>CP023864.1|AUI56217.1|1052064_1052256_-|hypothetical-protein
MERGVVCEVTPTGLLIIGEGLGVRLQMPFGRPMTQSVTAEESDEEVCEKSLQGSELIIRKIGV
>CP023864.1|AUI56218.1|1052638_1054186_+|sulfatase
MQTKVLYGLTGALAMGAVVPAQAQKKPMNIVFIMSDDHSYQTISAYDKRFISTPNIDWLADNGVKFQESFVANSLSGPSRACMLTGKHSHANGFTDNTKTFDGSQQTFPKLLQKQGYQTAMIGKWHLTSLPTGFNYWDILIGQGDYYNPDFLSNGKRIRRSGYVTNIIADMAIDWMEHKRDKTKPFCLLMHNKAPHRVWNPDTCDLRLYDDVTYPLPKTFYDDYAGRLAAQKQKMSIIKDMDLVYDNKMADKENEIHTTTGLEPWGRANYNRMSPSQRAQWDSYYDPIIKKFKEDKLSGKALAEWKYQRYMHDYMRVIHSVDRNVGRVIEYLREHNLLDNTMIVYTSDQGFYMGEHGWFDKRFMYEESFRTPLLIYFPGGKHGVINEMVQNIDYAPTFLDVAGAKIPSDIQGRSFLPLLEGKKPSDWRKSLYYHYYEYPAEHSVCRHYGIRTKRYTLIHFYNDIDSWELYDLKKDPEQMHNIYGKPGTEKLTKNLKKQLLQLQVQYNDPIRNKGL
>CP023864.1|AUI56219.1|1055567_1057955_-|TonB-dependent-receptor
MRRKDIQKYILLLLFIVAAQIVGAQSFTLQGKVSDKDGNPIELASVMVVTQGKLSMTNLKGEFNMQLQSEDSVKVRFSMIGYRTKTRVLVRPKGKQTLLVQLADDNELQEVVVQGKTKQHGTTEELDVQKTKQGPSTSGNAVEELVQTQAGVSTHSELSSQYNVRGGTFDENSVYINNIEVFRPFLVRSGQQEGLSIISPDMVESIGFSSGGFEAKYGDKMSSALDITYKRPKRTEATVSASLLGASAYLGLATKKLTWTNGVRYKTNRYLLGSLQTKGEYRPSFLDYQTYLSWKPNKRWQVDFIGNISENRYDFEPEDRETNFGTLQNVKKFRVYFDGKERDLFRTFFGSLAITRHLSAHTDLSLLASAFTTKEQERYDIQGQYWLTQTETSENLGVGTYMQHSRDYLNANVRSLKLMMQHRMGKHRLEGAVTYKLERIKENSAEYEYRDSAGYNVPHTGRDLKMIYSLRARNELNAKRFESYLQDTWNFQTRDSVPTLFTLNYGVRFAHWDFNGESLFSPRASLTITPGRNRNLSFRLAGGIYYQAPFYKELRDTSIVNGVTYATLNQKIRAQQSIHALAGMTYRFEMMGRPFKFTAEAYYKALSHLVPYSVDNVKVTYYGENTASGHATGLDLKLFGEFVPGADSWLTLSVMNTSMKLNGKRIPLPTDQRYALNLYFTDFFPGTTRWRMSLKLAYADGLPFSAPHKELENNTFRAPAYKRADIGMSYRLLDNHDGRSNTVFKNIWLGIDCLNLFGINNVNSYYWVTDIAGQQYAVPNYLTGRQINGRVTVEF
>CP023864.1|AUI56220.1|1058131_1059004_-|RNA-polymerase-subunit-sigma
MRQLKISKSITNRSSEALDKYLVEIGREPMITVDEEIELAQEIHKGGRKGERAKEKLIKANLRFVVSVAKQYQHQGLSLTDLIDEGNIGLVKAAEKFDETRGFKFISYAVWWIRQSILQAIAEQSRIVRLPLNQVGAISKINQVTNEFVQQHNRRPSIHELAELTGIDEARIRQSQSADNHHMSIDAPFSDDDDNSMSDMLSSGDDSRTDRSVDFESMSDDLRAVLQNTLKDREIKIVTECFGIGCQEKGLEEIGTEMGLTRERVRQIREKAIEKIRESGNARVLMKYLG

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Crispr_ID: CP023864_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_7

1036258-1036555

Orphan

Consensus_repeat	Method
CCAGCATTAGTGCCATTCGAGTAATTCGTAGTCT	PILER-CR

4 spacers

The CRISPR arrays of CP023864_7

>merge|CP023864|7|1036258-1036555|PILER-CR
CCAGCATTAGTGCCATTCGAGTAATTCGTAGTCTTCCATTTTCAAGACTATGTTCTTTCTTCATACCCAGCATTAGTACCATTCGAGTAATTCGTAGTCTTCCATTTTCAAGACTATATTCTTTCCTCATACCCAACATTAGTACCATTCGAGTAATTCGTAGTCTCGTACATTAAAGGTTGTATTCTTTCGTCCCATCCAGCATTAGTGCCATTCGTGTAATTCGTAGTCTCGTACATTAAAGGTTGTATTCTTACGTCCCATCCAGCATTAGTGCCATTCGAGTAATTCGTAGTCT

>CP023864|7|2|1036258-1036555|PILER-CR
CCAGCATTAGTGCCATTCGAGTAATTCGTAGTCT	TCCATTTTCAAGACTATGTTCTTTCTTCATAC
CCAGCATTAGTACCATTCGAGTAATTCGTAGTCT	TCCATTTTCAAGACTATATTCTTTCCTCATAC
CCAACATTAGTACCATTCGAGTAATTCGTAGTCT	CGTACATTAAAGGTTGTATTCTTTCGTCCCAT
CCAGCATTAGTGCCATTCGTGTAATTCGTAGTCT	CGTACATTAAAGGTTGTATTCTTACGTCCCAT
CCAGCATTAGTGCCATTCGAGTAATTCGTAGTCT

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56220.1\|1058131_1059004_-\|RNA-polymerase-subunit-sigma	unknown	unknown	gnl\|CDD\|223642
CP023864.1\|AUI56211.1\|1033139_1034546_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56218.1\|1052638_1054186_+\|sulfatase	unknown	unknown	gnl\|CDD\|293755
CP023864.1\|AUI56208.1\|1025252_1026734_+\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236327
CP023864.1\|AUI56210.1\|1031666_1033124_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56215.1\|1047000_1048614_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|369630
CP023864.1\|AUI56213.1\|1037397_1038927_+\|carbohydrate-binding-protein	unknown	unknown	gnl\|CDD\|226195
CP023864.1\|AUI56207.1\|1024197_1024875_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|225439
CP023864.1\|AUI56219.1\|1055567_1057955_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
CP023864.1\|AUI56712.1\|1049859_1050798_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
CP023864.1\|AUI56216.1\|1051189_1051654_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56217.1\|1052064_1052256_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56214.1\|1038936_1041255_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56209.1\|1026870_1027806_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56212.1\|1034678_1035758_+\|DUF4876-domain-containing-protein	unknown	unknown	gnl\|CDD\|379795
CP023864.1\|AUI56205.1\|1023618_1023831_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56711.1\|1043849_1046978_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
CP023864.1\|AUI56710.1\|1029241_1031650_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
CP023864.1\|AUI56204.1\|1021226_1022924_+\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
CP023864.1\|AUI56206.1\|1023991_1024222_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56220.1\|1058131_1059004_-\|RNA-polymerase-subunit-sigma	gnl\|CDD\|223642	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription].	5.18423e-81
CP023864.1\|AUI56218.1\|1052638_1054186_+\|sulfatase	gnl\|CDD\|293755	cd16031, G6S_like, unchracterized sulfatase homologous to glucosamine (N-acetyl)-6-sulfatase(G6S, GNS). N-acetylglucosamine-6-sulfatase also known as glucosamine (N-acetyl)-6-sulfatase hydrolyzes of the 6-sulfate groups of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate. Deficiency of N-acetylglucosamine-6-sulfatase results in the disease of Sanfilippo Syndrome type IIId or Mucopolysaccharidosis III (MPS-III), a rare autosomal recessive lysosomal storage disease.	0
CP023864.1\|AUI56208.1\|1025252_1026734_+\|proline--tRNA-ligase	gnl\|CDD\|236327	PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional.	0
CP023864.1\|AUI56219.1\|1055567_1057955_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.89017e-17
CP023864.1\|AUI56213.1\|1037397_1038927_+\|carbohydrate-binding-protein	gnl\|CDD\|226195	COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate transport and metabolism].	9.32146e-31
CP023864.1\|AUI56207.1\|1024197_1024875_-\|OmpA-family-protein	gnl\|CDD\|225439	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].	3.85061e-28
CP023864.1\|AUI56712.1\|1049859_1050798_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	9.27633e-67
CP023864.1\|AUI56204.1\|1021226_1022924_+\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
CP023864.1\|AUI56215.1\|1047000_1048614_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|369630	pfam07980, SusD_RagB, SusD family. This domain is found in bacterial cell surface proteins such SusD and SusD-like proteins, as as well RagB, outer membrane surface receptor antigen. Bacteroidetes, one of the two dominant bacterial phyla in the human gut, are Gram-negative saccharolytic microorganisms that utilize a diverse array of glycans. Hence, they express starch-utilization system (Sus) for glycan uptake. SusD has 551 amino acids, and is almost entirely alpha-helical, with 22 alpha-helices, eight of which form 4 tetra-trico peptide repeats (TPRs: helix-turn-helix motifs involved in protein-protein interactions). The four TPRs pack together to create a right-handed super-helix. This is predicted to mediate the formation of SusD and SusC porin complex at the cell surface. The interaction between SusC and TPR1/TPR2 region of SusD is predicted to be of functional importance since it allows SusD to be in position for oligosaccharide capture from other Sus lipoproteins and delivery of these glycans to the SusC porin. The non-TPR containing portion of SusD is where starch binding occurs. The binding site is a shallow surface cavity located on top of TPR1. SusD homologs such as SusD-like proteins have a critical role in carbohydrate acquisition. Both SusD and its homologs, contain about 15-20 residues at the N-terminus that might be a flexible linker region, anchoring the protein to the membrane and the glycan-binding domain. Other homologs to SusD have been examined in Porphyromonas gingivalis such as RagB, an immunodominant outer-membrane surface receptor antigen. Structural characterization of RagB shows substantial similarity with Bacteroides thetaiotaomicron SusD (i.e alpha-helices and TPR regions). Based on this structural similarity, functional studies suggest that, RagB binding of glycans occurs at pockets on the molecular surface that are distinct from those of SusD.	1.79719e-57
CP023864.1\|AUI56212.1\|1034678_1035758_+\|DUF4876-domain-containing-protein	gnl\|CDD\|379795	pfam16215, DUF4876, Protein of unknown function (DUF4876). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 392 and 433 amino acids in length. There is a conserved NNS sequence motif.	1.5017e-16
CP023864.1\|AUI56711.1\|1043849_1046978_+\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
CP023864.1\|AUI56710.1\|1029241_1031650_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.99923e-38

>CP023864.1|AUI56212.1|1034678_1035758_+|DUF4876-domain-containing-protein
MIQKKIAACLLIGLMLLAMSSCTRNEMPVKQSTSKTKLDHLIIKEVFYVGHYWYRDVRAWGMKNMNQMYNDDQYITIFNPTDEVKYLDGLALCVNAIDPSKAIQFAPKDDFVNRYYGASGISYFPGKGNDYPVKPGQTIIVAKYAIDHKASFEAELEGEDLSMYGGLNAFLDLSKADFEWTNINYDPGQKNNPNVPDMCAILTSTDASGNIGPSYDFSRVSESNGIALIKLPWTPEEFKKNYAETKDSKGYLHYITVTSSAHGDFYAIEVPLECVIDCITICPRRMFQMRPSKLDRGYNAVTDNSFSGLKQSDYPISSGLALVRKWDGKKFVDDNNTTADFEVKVASLSRKDEKGNPIK
>CP023864.1|AUI56211.1|1033139_1034546_+|hypothetical-protein
MNKIVKNILLLSCLAVVFASCDDFVFGNVHVDYNENPLESKGLARSGADRYVDSLSKIKVSEQVNNPDPDGAFNGWATCLAMFKEGHSHGDGMMHGNFVYHNAPWKQEEFVIIRNNTAKWPTVEVQRQSTVTYLEQSDGKTGPDYIRIIGGKLKRWGLCLYFFNKEGKLMNDDILDHSDEYQIFFTVSEVDDKGNPYEVMDCRGTWKPKKNKFGDWKKGGTIDTTPVPSPFFANTTTWKERAERTPKIFEYTYRDTWIHNAMADGARELFNQRLLPPLTREDADWAVAPYDQDRVGLKGHFNFDIEADENDALHEEWPLEITRRLDPATGETGHYTRPSYLLPKFYLSVRVMKCPKGKKALIPKDEYLSRHSTYVFRSPYICSEAYNPDEPKEYGADSEWKELFRFNIPIKVFCSSFDTDPTTIDPNDPLYFYLGHEIGLSPLDALEASQNVQTHGIGGGSGFGNWFL
>CP023864.1|AUI56210.1|1031666_1033124_+|hypothetical-protein
MKLYKDIRLILATAAVGLVFGSCSNDQVDDFFKKIIQAPPSSIERDVKGHEQIYAVHAILRMGYKGGMIGVGPDGNDSIQAYNTYHLVSSSTSIPVMQEIDIAKDDDGQMTITTERDCFDVIASDDIYYGLELKYYDQNGMLINHQFSGYPFMKDKEGYNVPDEDNATLLVHQHFFGIGNASLDKLVADSTSSGHEKAVQGMQMAYPRSLASIPTYYDRYTFKEQGGAMEAATKFSTSNIYVPDGYTFGLNQVPFNSELAWRAIEVSGKPEALQPFTFGGKTYHLYKTIDPMELNKITPEVFTYEYRDTDPVEEELGKLFTEAYNDDFTDPDTEAPRQRYGHTVGLLHQKRSLDVGSDLDRLGFKGVMQFHKSDIAFQLQVRICHILNKGQQHVGESEKPAKYCNTNNSEHSFLWDFNQLQPGWDSFDIDYPLSVRVIANTKDGEDKCFEDVKRFYPAANKAQLWRMLTRPQDFFTQYRQNVVLM
>CP023864.1|AUI56710.1|1029241_1031650_+|TonB-dependent-receptor
MNYERRARYYLSATLLSSLFLFPPTYVHATSVHGQETVEDEDKDVKTSVTVRVVSEQSQEPLIGAVVRCEGVSNPSVTDIDGKCTIKLKRAADRIKLTVTYVGYKSVTRVVNVPDSRMITLQLKDDSKQLDNVTVTALKRHTTVLQQSSAISQEALEKGGATSLAKLLETIPGVSSISTGNTIAKPVIQGMHSSRILLMNNGVRLESQSWGADHAPELDYTGSSMVEVVKGAECIRYGFGAMGGVVLLNDAPLPYENKKIKVNGNVNVGYDTNARGFSGSGTVETGYKQFGLRLHGMYTKGGDYHTADYVLNNTGYNTISFSALAGWQGRKLTATLFSSIYYQRSGIYYASKISDLSQLIKRFEYGRPDPETVKPFSYDIKPPFQQSQHVTLKGELKWELNPNHHLNLTLSFQENLRQEFENRKKTQWSWIPMQDLILKTYKFDVLWQAKWKLWKMTTDAGLSNTYQTNFNYPGTKQPAFVPNFAALSMGGYFLHKAEFGRLQCALGMRYDFRVLSVNGYSSLSNYTYYDDFKLYSNFTMSLATHYQFSDKWDARANIGWSWRPPDINELYAIGLQDGSYWVVGNKNLASERGYKLVLGTKYRNTWFSVEPSFFFQRINSYIYDHIGEGKDRFHNHPSGKYPKFIYDQDDVKLYGGDIEATVKPVRGLTFVGKGEWMFARNLTHNDWLPFMPSDRYGLSATYELPLKKPQKYRSSLSLSGIYVTKQTRFDPDKDLVPDSPPAYFLLNGTAELRIGLPQNKELKFMIVGDNILNALYKEYTDRFRYYAHERGANFSLRTLFKF
>CP023864.1|AUI56209.1|1026870_1027806_+|hypothetical-protein
MKKSLLTFVFLLALTALNAQTLIKAKFQKGEQATYSTVSEAKLSTPMGGGDQSLKTSSNTVITVKEANADGYVIELKTKDVKTEGDQSTALQTQTIVSQYFGNVPMRVKTDANGKVTDILNFEEVQASVSKLVMAFIDSIYKEKPQLEQSLPKYKMAMSLNNMLTKQTFIEIMEHSTFFNLFGKTLKTGDKEDVNQQGIKSIVTYEVTKEPNELVIIGKTQNNMSEDDVKGFLIDKMKLMGSDESMIAKFEQGWLMMKKMGLTKMDGAGTITTRLLPSGWATEYSSSIKSKVMGAVMTTNSVSKLVGHNWK
>CP023864.1|AUI56208.1|1025252_1026734_+|proline--tRNA-ligase
MAKELKELTKRADNYSQWYNDLVIKADLIEQSAVRGCMVIKPYGYAIWEKIQAQLDKMFKETGVQNAYFPMLIPKSFLSREAEHVKGFAKECAVVTHYRLKATEDGNAVQVDPNAKLEEELIIRPTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMRTRPFLRTSEFLWQEGHTAHATREEAEKEAQTMLRVYADFAEKWLAVPVVQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPKIAPIQVVIVPIFKGEEQLKELTAKLQPVIDQLRELGITVKYDDTDNKRPGFKFADYELKGVPVRLAMGGRDLENNTIEVMRRDTLEKESLSFDGIVEHIKNLLDDIQANIFKKAKDFRDAHIYECENYDEFKERVKDGGFFLCHWDGTEETEAKIKEDTQATIRCVPYMFEQTPGVDMVSGKPAKYRVIIARSY
>CP023864.1|AUI56207.1|1024197_1024875_-|OmpA-family-protein
MKNMKMMAAGMCLLTVVSCQTKQGTGSLIGGGAGAALGGIVGQIIGHNGKSTAIGAAIGGAVGAGAGALIGRHMDKVAREASQQLPNARVDKVTDANGLDCVKVTFDSGILFPLNGSNLSASAKNDLTKFASLMQRNSNCDVAIQGYTDASGNDNINVPLSQRRAEAVSSYLKGRGVSSRQIRSVQGFGSANPIENKTISQANRRVEVYLYASSEMVRQANNGSL
>CP023864.1|AUI56206.1|1023991_1024222_+|hypothetical-protein
MFLKHEGHILDSSMAKTLYIFVGNKHGVSPLLFQRKRDTASAISLRKDFISKVYWDRRETTVPLYLLITYKEPLFA
>CP023864.1|AUI56205.1|1023618_1023831_-|hypothetical-protein
MRFCQVFSRTQEIYWVLYFSQIFTDEQKPFSEQGEHAEKWWPLPVPSWPLPLPLPKREGRDHRDTPIEWM
>CP023864.1|AUI56204.1|1021226_1022924_+|energy-dependent-translational-throttle-protein-EttA
MATVDDKKIIFSMVGVSKIIPQNQKQILKNIYLSFFYGAKIGIIGLNGAGKSTLMKIIAGLVEPTQGEVVWSPGYTVGYLPQDPPLDEAKTVKENVMEGVQHIYDALKEYDDINVKFGMEEYYSDADKMDKLMQRQAELQDIIDATDAWNIDSRLERAMDALRCPKGDLPVTNLSGGERRRVALCRLLLQKPDVLLLDEPTNHLDAESIDWLEQHLQQYEGTVIAVTHDRYFLDDVSEWILELDRGEGIPWKGNYSSWLDQKTKRMEQEEKSASKRRKTLERELEWVRMAPKARQAKGKARLNSYEQMLNEEQKQREEKLEIFIPNGPRLGNKVIEAQHVKKAFGEKVLFNDLNFMLPPNGIVGVIGPNGAGKTTLFRLIMGLEQADGGTFEVGETVKLAYVDQQHKDIDPNKTVYDVVSQGNDTIRMGGRDINSRAYLSRFNFSGTDQSKLCSVLSGGERNRLQLAMALKQEGNVLLLDEPTNDIDVNTLRALEEGLEAFAGCAVVISHDRWFLDRICTHILAFEGNGEVVFFEGGFSDYEINKARRLGNEEIKKGRYRKLMEE
>CP023864.1|AUI56213.1|1037397_1038927_+|carbohydrate-binding-protein
MNNRFLHGVLTALALTATATSFAQNPTVMTLQTQVAPNPENEPRPVFPVPSDRQWQWQQTEFYAFFHYGMNTYVNEEWGKGNESPNSFAPTEKPDPRQWLEAVQAAGMKGGIAVVKHHDGFCLWPTASTDYNISHSSSPNAQGVNIAELFAKAAQELHMKYGFYVSPWDRNNGQYGTDSYVKDVFLKQCAELAKYGSDQFEMWFDGANGGDGYYGGKNTTIHIDRSTYYDVPNLRDSIHKLSPNIILWGVGGEARWIGNEDGWAGETNWCNENRGVAPERNGMYGTENGWFWLPGESDAKFTNPGWFWSQKSKPMTAERTFQMYLETVGRNSTLILNCPPDRSGKLPQDQVSRLKEFGKMLKSRFQTNLAKSATIEASSTRAHGATRSYAANNLIDENPDTYWAAEDDVKDVTLTLKWNNPQTVRYVTLQEYVRLGQRVKSFSVEYTTDGSTWKPLANKVKQTTIGYKRIIPLNGSTANSYGSGYEARAIRIHIKDAKACPVMSEIAIY
>CP023864.1|AUI56214.1|1038936_1041255_+|hypothetical-protein
MRNSMKKNILAACGLLFCSSLLHAQTTDEVRIDFENQDYQAIGVYDTWLKSPFRSHDGQPATLQGNVQVVSNIDKNYDDVLKSTPNASDKVLGFQRSRYGSNTFGARIDLKQPFALTKETKYVHVMIHKPKAGRTMLIGLGKRTDRPGQSADTEQFWEFSTKEIEPNKWVDAVFPVKGAGGIDIHSLVVVVDCEDSNGLKDDFLAYIDNIVVNNEAFTTTNREDYPMNYNKDQKCTRTDRGLKGISLGNQSIAVYGDISSSTPAYTYLSKRAFWAKPGETLTPAVQYKGIWMHSYVYVDLNNNGRFEPKVEAGQIVPDAGNELMAYSFLSASDENSGFNSAGTEISGNGRNTLSMPAFTLPDTLQHGFYRMRYKVDWNSSDAGGSIETNNHIINNGGGAMDIRLNVHGDNVTITQGALNGKVVAADDTELNNLSIPFGQPFTIKMKPEHGFNFNGLRVRHGYNLTGDSLSHGTYQYVDELVPRERFNEDGTFTLPAEMIDGDVSLEGIFIDAKTTLTYEVYFNNKFVYSTAVNGAKTGAVTIPESLNRDFVELSSDTQTVTSLPATVRINAMWTGPMKVATATDTTWYNLKVSSQPKWVSSRTYAPNVYFIDQSDTDKDAALWALTGDPYSGFHLINKAVGPTHVLASASPKGSGNAGGFTFATLESASELPIGYTSGWFLNVSPNDEAGFYICNPEGYGLNYRANNNLAYWTGGKDGGSTFVPTEVKKTSTGISSLTLQQDATTTYDLTGRSVGKNHRGIVIRNGKKLLIK
>CP023864.1|AUI56711.1|1043849_1046978_+|TonB-dependent-receptor
MSNFMKVSKNRRKHPPFVTGSVAFSFALGLMAVAPSPVLANVDANTSMSVQQQKQSINGVVKDVNGEPVIGASVLANGTPVGVTDVDGRFSISVAPGTELKISYVGFATQSLTVRSGVTSYNITLKDENSALSEVVVVGYGTQKKANLSGSVAQLDGKTLENRPISNVSSGLQGLLPGITVTGADGAPGLDNGSILVRGVGTLNSASPYILIDGVEAGTLNSLDPEDIASISVLKDASSAAIYGSKASNGVILVTTKRGQNGAPKVSYSGYFGIQNATALMDRMNSADAAYYYNKALERSGKAPRFSEEAIQKFRDGSDPYNYPNTDWYGLAFKTAWQNRHSVNITGGNEFVKYLASAGYLKQSSILPNAGREQFNGRANIDMVLSKRITAHLNLAYIQNNYRDASSAYAGGSSDQIIRQLNIIAPWIVYKYEDGTYGTVSDGNPMAWLESGMTVNRNNRNFTGMIGLDYQILKDLKLTLQGAYVDASQRYSYFQKFIQYNPNKASDPNKLEIAHYDWHRTTFDAFLNYDKSFAKHNIKAMLGWHTERYKYLPDWMYRKSFPNNDLTDMNAGDASTQQNAGNTRELAMVSYFGRLNYDYAGRYLFEANFRSDASSRFADGHRWGFFPSFSAAWRVSEEPFMEGSKSWLNNLKLRASWGQLGNQDALNDYYPWMNTYNLNAKYPFGGQLTPGYYQGSYHLETISWERSTTWGVGLDFTLFGGLTGSLDYYNRKTTGIIMDVSAPAEFALGAYKDNIGALRNQGVELSLAYAKQLNKDWTINVGANFSYNKNKILYLGEGTEYVVDKDNRNRRTAIGQQYKSYYMYKATGKFFNSQQEADDYTAKYGNPFGRKFMAGDLIYEDANGDGKLDSNDRIYTKHTDIPAITYGFNLGATWKNIDLSMIWQGVGAVSHIYNREVLGEFSGDASHPSTLWKDSWTDDNHNAKLPRVFETGNSPSDMTRAMSTFWLWNTAYLRLKTLQIGYTLPKSTLKAIGLEKVRIYYAGENLLTFDALPFNIDPEVTSERGSSYPLLRSHSIGINITF
>CP023864.1|AUI56215.1|1047000_1048614_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKTVRTYILAGVAAFALTSCNDYLTTVPKDAMSPSTTWKTSDDAEKFLVGCYDGWEDGGALLYWDAGSDFAYNNFPWEGFTNIGNGSLSPSSPGWSFYDYTIIGRCNTFLENVDKCAFSSEAAKKDLIAQVKAIRAYNYFRMGFLYGGVPIVKPFTSAQEARVPRNTEQEVKDLVFKDLDEAIADINTSPAARGRIAKGAALAMKMRAALYWGDYQKAKDAAQAIIDLGLYELDPDYTNLFKLAGKDSKEIILAVQYKSGTRPLSTIGQLYNNGDGGWSSVVPTQKCVDNYEMSNGMTIDEAGSGYDATHPFHGRDPRMAMTILYPGCDWDGTVFNTLDENVNGKKNPNYPTNAANSSKTALTWRKYLDPKTQYADVWDTEASPIVFRYAEVLLTWAEAENELNGPSANVYAMLDKVRTRVGMPAVDQSKYNTKDKLRELIRRERGSEFAGEGLRRADILRWTSNGKMVAETVLNGPLTRVTGTIDNTATDPTMRAVVSGTSKVEDRSFQTYNRYLPIPQWNISDNPKLEQNPGYAK
>CP023864.1|AUI56712.1|1049859_1050798_+|IS30-family-transposase
MYHQLISEQRSQIFALLQKKTARKEIADIVGISQSTLSREIKRNSTPSGKYIWTKAHDMAMQRRKSTVTNAKLSDELVWRIKEYITNDQWSPRQISGYLRMNEGIEVSHQSIYNIIHNDTTGKLAEHTRHKMKYRHRPKGGHLPIKDRVSIHERSKEVDGKRFGDFEMDLIVDPAQHAILTIVEKSTNMLLMQKLPFGKMSKPLAKVVRKLLLPYKNSLKTITTDNGPEFAAHKDITKYLGVPVYFADPYCSWQKGTVENTNKLIRQYIPKKDSFDNYTDKRIMSIQKKLNERPREKLNFSTPKCEFFKHVL
>CP023864.1|AUI56216.1|1051189_1051654_+|hypothetical-protein
MGPVVVDSWLDRGYKIIGKYKLLNPQPLPLTKSDWLFIHKQLPIWVRKHYPNYRHMPTISQLSIDSLKSNTSYQFTLLHDGKLLEEDVYLLSLPSSNVNHPLKIYIPKASVADEKQLTKDGRLVSKPVLVYPFLTEAWERNINETKPYGIGDMW
>CP023864.1|AUI56217.1|1052064_1052256_-|hypothetical-protein
MERGVVCEVTPTGLLIIGEGLGVRLQMPFGRPMTQSVTAEESDEEVCEKSLQGSELIIRKIGV
>CP023864.1|AUI56218.1|1052638_1054186_+|sulfatase
MQTKVLYGLTGALAMGAVVPAQAQKKPMNIVFIMSDDHSYQTISAYDKRFISTPNIDWLADNGVKFQESFVANSLSGPSRACMLTGKHSHANGFTDNTKTFDGSQQTFPKLLQKQGYQTAMIGKWHLTSLPTGFNYWDILIGQGDYYNPDFLSNGKRIRRSGYVTNIIADMAIDWMEHKRDKTKPFCLLMHNKAPHRVWNPDTCDLRLYDDVTYPLPKTFYDDYAGRLAAQKQKMSIIKDMDLVYDNKMADKENEIHTTTGLEPWGRANYNRMSPSQRAQWDSYYDPIIKKFKEDKLSGKALAEWKYQRYMHDYMRVIHSVDRNVGRVIEYLREHNLLDNTMIVYTSDQGFYMGEHGWFDKRFMYEESFRTPLLIYFPGGKHGVINEMVQNIDYAPTFLDVAGAKIPSDIQGRSFLPLLEGKKPSDWRKSLYYHYYEYPAEHSVCRHYGIRTKRYTLIHFYNDIDSWELYDLKKDPEQMHNIYGKPGTEKLTKNLKKQLLQLQVQYNDPIRNKGL
>CP023864.1|AUI56219.1|1055567_1057955_-|TonB-dependent-receptor
MRRKDIQKYILLLLFIVAAQIVGAQSFTLQGKVSDKDGNPIELASVMVVTQGKLSMTNLKGEFNMQLQSEDSVKVRFSMIGYRTKTRVLVRPKGKQTLLVQLADDNELQEVVVQGKTKQHGTTEELDVQKTKQGPSTSGNAVEELVQTQAGVSTHSELSSQYNVRGGTFDENSVYINNIEVFRPFLVRSGQQEGLSIISPDMVESIGFSSGGFEAKYGDKMSSALDITYKRPKRTEATVSASLLGASAYLGLATKKLTWTNGVRYKTNRYLLGSLQTKGEYRPSFLDYQTYLSWKPNKRWQVDFIGNISENRYDFEPEDRETNFGTLQNVKKFRVYFDGKERDLFRTFFGSLAITRHLSAHTDLSLLASAFTTKEQERYDIQGQYWLTQTETSENLGVGTYMQHSRDYLNANVRSLKLMMQHRMGKHRLEGAVTYKLERIKENSAEYEYRDSAGYNVPHTGRDLKMIYSLRARNELNAKRFESYLQDTWNFQTRDSVPTLFTLNYGVRFAHWDFNGESLFSPRASLTITPGRNRNLSFRLAGGIYYQAPFYKELRDTSIVNGVTYATLNQKIRAQQSIHALAGMTYRFEMMGRPFKFTAEAYYKALSHLVPYSVDNVKVTYYGENTASGHATGLDLKLFGEFVPGADSWLTLSVMNTSMKLNGKRIPLPTDQRYALNLYFTDFFPGTTRWRMSLKLAYADGLPFSAPHKELENNTFRAPAYKRADIGMSYRLLDNHDGRSNTVFKNIWLGIDCLNLFGINNVNSYYWVTDIAGQQYAVPNYLTGRQINGRVTVEF
>CP023864.1|AUI56220.1|1058131_1059004_-|RNA-polymerase-subunit-sigma
MRQLKISKSITNRSSEALDKYLVEIGREPMITVDEEIELAQEIHKGGRKGERAKEKLIKANLRFVVSVAKQYQHQGLSLTDLIDEGNIGLVKAAEKFDETRGFKFISYAVWWIRQSILQAIAEQSRIVRLPLNQVGAISKINQVTNEFVQQHNRRPSIHELAELTGIDEARIRQSQSADNHHMSIDAPFSDDDDNSMSDMLSSGDDSRTDRSVDFESMSDDLRAVLQNTLKDREIKIVTECFGIGCQEKGLEEIGTEMGLTRERVRQIREKAIEKIRESGNARVLMKYLG

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Crispr_ID: CP023864_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_8

1041308-1041427

Orphan

Consensus_repeat	Method
CAGGGTATAGAAAGACAGAGTAACAGATGAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_8

>merge|CP023864|8|1041308-1041427|CRISPRCasFinder
CAGGGTATAGAAAGACAGAGTAACAGATGAACAAGTATCCAGTTGATGAGTAGACGAGGTAACAAGTCGACAAGTTATGTGCTCTGGCAGGGTATTAGAAAGACAGAGTAACAGATGAAC

>CP023864|8|5|1041308-1041427|CRISPRCasFinder
CAGGGTATAGAAAGACAGAGTAACAGATGAAC	AAGTATCCAGTTGATGAGTAGACGAGGTAACAAGTCGACAAGTTATGTGCTCTGGC
AGGGTATTAGAAAGACAGAGTAACAGATGAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56220.1\|1058131_1059004_-\|RNA-polymerase-subunit-sigma	unknown	unknown	gnl\|CDD\|223642
CP023864.1\|AUI56211.1\|1033139_1034546_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56221.1\|1060561_1061080_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56218.1\|1052638_1054186_+\|sulfatase	unknown	unknown	gnl\|CDD\|293755
CP023864.1\|AUI56208.1\|1025252_1026734_+\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236327
CP023864.1\|AUI56210.1\|1031666_1033124_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56215.1\|1047000_1048614_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|369630
CP023864.1\|AUI56213.1\|1037397_1038927_+\|carbohydrate-binding-protein	unknown	unknown	gnl\|CDD\|226195
CP023864.1\|AUI56207.1\|1024197_1024875_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|225439
CP023864.1\|AUI56219.1\|1055567_1057955_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
CP023864.1\|AUI56712.1\|1049859_1050798_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
CP023864.1\|AUI56216.1\|1051189_1051654_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56217.1\|1052064_1052256_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56214.1\|1038936_1041255_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56209.1\|1026870_1027806_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56212.1\|1034678_1035758_+\|DUF4876-domain-containing-protein	unknown	unknown	gnl\|CDD\|379795
CP023864.1\|AUI56222.1\|1061536_1064041_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370572
CP023864.1\|AUI56711.1\|1043849_1046978_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
CP023864.1\|AUI56710.1\|1029241_1031650_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
CP023864.1\|AUI56206.1\|1023991_1024222_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56220.1\|1058131_1059004_-\|RNA-polymerase-subunit-sigma	gnl\|CDD\|223642	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription].	5.18423e-81
CP023864.1\|AUI56218.1\|1052638_1054186_+\|sulfatase	gnl\|CDD\|293755	cd16031, G6S_like, unchracterized sulfatase homologous to glucosamine (N-acetyl)-6-sulfatase(G6S, GNS). N-acetylglucosamine-6-sulfatase also known as glucosamine (N-acetyl)-6-sulfatase hydrolyzes of the 6-sulfate groups of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate. Deficiency of N-acetylglucosamine-6-sulfatase results in the disease of Sanfilippo Syndrome type IIId or Mucopolysaccharidosis III (MPS-III), a rare autosomal recessive lysosomal storage disease.	0
CP023864.1\|AUI56208.1\|1025252_1026734_+\|proline--tRNA-ligase	gnl\|CDD\|236327	PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional.	0
CP023864.1\|AUI56219.1\|1055567_1057955_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.89017e-17
CP023864.1\|AUI56213.1\|1037397_1038927_+\|carbohydrate-binding-protein	gnl\|CDD\|226195	COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate transport and metabolism].	9.32146e-31
CP023864.1\|AUI56207.1\|1024197_1024875_-\|OmpA-family-protein	gnl\|CDD\|225439	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].	3.85061e-28
CP023864.1\|AUI56712.1\|1049859_1050798_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	9.27633e-67
CP023864.1\|AUI56215.1\|1047000_1048614_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|369630	pfam07980, SusD_RagB, SusD family. This domain is found in bacterial cell surface proteins such SusD and SusD-like proteins, as as well RagB, outer membrane surface receptor antigen. Bacteroidetes, one of the two dominant bacterial phyla in the human gut, are Gram-negative saccharolytic microorganisms that utilize a diverse array of glycans. Hence, they express starch-utilization system (Sus) for glycan uptake. SusD has 551 amino acids, and is almost entirely alpha-helical, with 22 alpha-helices, eight of which form 4 tetra-trico peptide repeats (TPRs: helix-turn-helix motifs involved in protein-protein interactions). The four TPRs pack together to create a right-handed super-helix. This is predicted to mediate the formation of SusD and SusC porin complex at the cell surface. The interaction between SusC and TPR1/TPR2 region of SusD is predicted to be of functional importance since it allows SusD to be in position for oligosaccharide capture from other Sus lipoproteins and delivery of these glycans to the SusC porin. The non-TPR containing portion of SusD is where starch binding occurs. The binding site is a shallow surface cavity located on top of TPR1. SusD homologs such as SusD-like proteins have a critical role in carbohydrate acquisition. Both SusD and its homologs, contain about 15-20 residues at the N-terminus that might be a flexible linker region, anchoring the protein to the membrane and the glycan-binding domain. Other homologs to SusD have been examined in Porphyromonas gingivalis such as RagB, an immunodominant outer-membrane surface receptor antigen. Structural characterization of RagB shows substantial similarity with Bacteroides thetaiotaomicron SusD (i.e alpha-helices and TPR regions). Based on this structural similarity, functional studies suggest that, RagB binding of glycans occurs at pockets on the molecular surface that are distinct from those of SusD.	1.79719e-57
CP023864.1\|AUI56212.1\|1034678_1035758_+\|DUF4876-domain-containing-protein	gnl\|CDD\|379795	pfam16215, DUF4876, Protein of unknown function (DUF4876). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 392 and 433 amino acids in length. There is a conserved NNS sequence motif.	1.5017e-16
CP023864.1\|AUI56222.1\|1061536_1064041_-\|hypothetical-protein	gnl\|CDD\|370572	pfam09586, YfhO, Bacterial membrane protein YfhO. This protein is a conserved membrane protein. The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system. Some members of this family have been annotated as glycosyl transferases of the PMT family.	4.56783e-09
CP023864.1\|AUI56711.1\|1043849_1046978_+\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
CP023864.1\|AUI56710.1\|1029241_1031650_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.99923e-38

>CP023864.1|AUI56214.1|1038936_1041255_+|hypothetical-protein
MRNSMKKNILAACGLLFCSSLLHAQTTDEVRIDFENQDYQAIGVYDTWLKSPFRSHDGQPATLQGNVQVVSNIDKNYDDVLKSTPNASDKVLGFQRSRYGSNTFGARIDLKQPFALTKETKYVHVMIHKPKAGRTMLIGLGKRTDRPGQSADTEQFWEFSTKEIEPNKWVDAVFPVKGAGGIDIHSLVVVVDCEDSNGLKDDFLAYIDNIVVNNEAFTTTNREDYPMNYNKDQKCTRTDRGLKGISLGNQSIAVYGDISSSTPAYTYLSKRAFWAKPGETLTPAVQYKGIWMHSYVYVDLNNNGRFEPKVEAGQIVPDAGNELMAYSFLSASDENSGFNSAGTEISGNGRNTLSMPAFTLPDTLQHGFYRMRYKVDWNSSDAGGSIETNNHIINNGGGAMDIRLNVHGDNVTITQGALNGKVVAADDTELNNLSIPFGQPFTIKMKPEHGFNFNGLRVRHGYNLTGDSLSHGTYQYVDELVPRERFNEDGTFTLPAEMIDGDVSLEGIFIDAKTTLTYEVYFNNKFVYSTAVNGAKTGAVTIPESLNRDFVELSSDTQTVTSLPATVRINAMWTGPMKVATATDTTWYNLKVSSQPKWVSSRTYAPNVYFIDQSDTDKDAALWALTGDPYSGFHLINKAVGPTHVLASASPKGSGNAGGFTFATLESASELPIGYTSGWFLNVSPNDEAGFYICNPEGYGLNYRANNNLAYWTGGKDGGSTFVPTEVKKTSTGISSLTLQQDATTTYDLTGRSVGKNHRGIVIRNGKKLLIK
>CP023864.1|AUI56213.1|1037397_1038927_+|carbohydrate-binding-protein
MNNRFLHGVLTALALTATATSFAQNPTVMTLQTQVAPNPENEPRPVFPVPSDRQWQWQQTEFYAFFHYGMNTYVNEEWGKGNESPNSFAPTEKPDPRQWLEAVQAAGMKGGIAVVKHHDGFCLWPTASTDYNISHSSSPNAQGVNIAELFAKAAQELHMKYGFYVSPWDRNNGQYGTDSYVKDVFLKQCAELAKYGSDQFEMWFDGANGGDGYYGGKNTTIHIDRSTYYDVPNLRDSIHKLSPNIILWGVGGEARWIGNEDGWAGETNWCNENRGVAPERNGMYGTENGWFWLPGESDAKFTNPGWFWSQKSKPMTAERTFQMYLETVGRNSTLILNCPPDRSGKLPQDQVSRLKEFGKMLKSRFQTNLAKSATIEASSTRAHGATRSYAANNLIDENPDTYWAAEDDVKDVTLTLKWNNPQTVRYVTLQEYVRLGQRVKSFSVEYTTDGSTWKPLANKVKQTTIGYKRIIPLNGSTANSYGSGYEARAIRIHIKDAKACPVMSEIAIY
>CP023864.1|AUI56212.1|1034678_1035758_+|DUF4876-domain-containing-protein
MIQKKIAACLLIGLMLLAMSSCTRNEMPVKQSTSKTKLDHLIIKEVFYVGHYWYRDVRAWGMKNMNQMYNDDQYITIFNPTDEVKYLDGLALCVNAIDPSKAIQFAPKDDFVNRYYGASGISYFPGKGNDYPVKPGQTIIVAKYAIDHKASFEAELEGEDLSMYGGLNAFLDLSKADFEWTNINYDPGQKNNPNVPDMCAILTSTDASGNIGPSYDFSRVSESNGIALIKLPWTPEEFKKNYAETKDSKGYLHYITVTSSAHGDFYAIEVPLECVIDCITICPRRMFQMRPSKLDRGYNAVTDNSFSGLKQSDYPISSGLALVRKWDGKKFVDDNNTTADFEVKVASLSRKDEKGNPIK
>CP023864.1|AUI56211.1|1033139_1034546_+|hypothetical-protein
MNKIVKNILLLSCLAVVFASCDDFVFGNVHVDYNENPLESKGLARSGADRYVDSLSKIKVSEQVNNPDPDGAFNGWATCLAMFKEGHSHGDGMMHGNFVYHNAPWKQEEFVIIRNNTAKWPTVEVQRQSTVTYLEQSDGKTGPDYIRIIGGKLKRWGLCLYFFNKEGKLMNDDILDHSDEYQIFFTVSEVDDKGNPYEVMDCRGTWKPKKNKFGDWKKGGTIDTTPVPSPFFANTTTWKERAERTPKIFEYTYRDTWIHNAMADGARELFNQRLLPPLTREDADWAVAPYDQDRVGLKGHFNFDIEADENDALHEEWPLEITRRLDPATGETGHYTRPSYLLPKFYLSVRVMKCPKGKKALIPKDEYLSRHSTYVFRSPYICSEAYNPDEPKEYGADSEWKELFRFNIPIKVFCSSFDTDPTTIDPNDPLYFYLGHEIGLSPLDALEASQNVQTHGIGGGSGFGNWFL
>CP023864.1|AUI56210.1|1031666_1033124_+|hypothetical-protein
MKLYKDIRLILATAAVGLVFGSCSNDQVDDFFKKIIQAPPSSIERDVKGHEQIYAVHAILRMGYKGGMIGVGPDGNDSIQAYNTYHLVSSSTSIPVMQEIDIAKDDDGQMTITTERDCFDVIASDDIYYGLELKYYDQNGMLINHQFSGYPFMKDKEGYNVPDEDNATLLVHQHFFGIGNASLDKLVADSTSSGHEKAVQGMQMAYPRSLASIPTYYDRYTFKEQGGAMEAATKFSTSNIYVPDGYTFGLNQVPFNSELAWRAIEVSGKPEALQPFTFGGKTYHLYKTIDPMELNKITPEVFTYEYRDTDPVEEELGKLFTEAYNDDFTDPDTEAPRQRYGHTVGLLHQKRSLDVGSDLDRLGFKGVMQFHKSDIAFQLQVRICHILNKGQQHVGESEKPAKYCNTNNSEHSFLWDFNQLQPGWDSFDIDYPLSVRVIANTKDGEDKCFEDVKRFYPAANKAQLWRMLTRPQDFFTQYRQNVVLM
>CP023864.1|AUI56710.1|1029241_1031650_+|TonB-dependent-receptor
MNYERRARYYLSATLLSSLFLFPPTYVHATSVHGQETVEDEDKDVKTSVTVRVVSEQSQEPLIGAVVRCEGVSNPSVTDIDGKCTIKLKRAADRIKLTVTYVGYKSVTRVVNVPDSRMITLQLKDDSKQLDNVTVTALKRHTTVLQQSSAISQEALEKGGATSLAKLLETIPGVSSISTGNTIAKPVIQGMHSSRILLMNNGVRLESQSWGADHAPELDYTGSSMVEVVKGAECIRYGFGAMGGVVLLNDAPLPYENKKIKVNGNVNVGYDTNARGFSGSGTVETGYKQFGLRLHGMYTKGGDYHTADYVLNNTGYNTISFSALAGWQGRKLTATLFSSIYYQRSGIYYASKISDLSQLIKRFEYGRPDPETVKPFSYDIKPPFQQSQHVTLKGELKWELNPNHHLNLTLSFQENLRQEFENRKKTQWSWIPMQDLILKTYKFDVLWQAKWKLWKMTTDAGLSNTYQTNFNYPGTKQPAFVPNFAALSMGGYFLHKAEFGRLQCALGMRYDFRVLSVNGYSSLSNYTYYDDFKLYSNFTMSLATHYQFSDKWDARANIGWSWRPPDINELYAIGLQDGSYWVVGNKNLASERGYKLVLGTKYRNTWFSVEPSFFFQRINSYIYDHIGEGKDRFHNHPSGKYPKFIYDQDDVKLYGGDIEATVKPVRGLTFVGKGEWMFARNLTHNDWLPFMPSDRYGLSATYELPLKKPQKYRSSLSLSGIYVTKQTRFDPDKDLVPDSPPAYFLLNGTAELRIGLPQNKELKFMIVGDNILNALYKEYTDRFRYYAHERGANFSLRTLFKF
>CP023864.1|AUI56209.1|1026870_1027806_+|hypothetical-protein
MKKSLLTFVFLLALTALNAQTLIKAKFQKGEQATYSTVSEAKLSTPMGGGDQSLKTSSNTVITVKEANADGYVIELKTKDVKTEGDQSTALQTQTIVSQYFGNVPMRVKTDANGKVTDILNFEEVQASVSKLVMAFIDSIYKEKPQLEQSLPKYKMAMSLNNMLTKQTFIEIMEHSTFFNLFGKTLKTGDKEDVNQQGIKSIVTYEVTKEPNELVIIGKTQNNMSEDDVKGFLIDKMKLMGSDESMIAKFEQGWLMMKKMGLTKMDGAGTITTRLLPSGWATEYSSSIKSKVMGAVMTTNSVSKLVGHNWK
>CP023864.1|AUI56208.1|1025252_1026734_+|proline--tRNA-ligase
MAKELKELTKRADNYSQWYNDLVIKADLIEQSAVRGCMVIKPYGYAIWEKIQAQLDKMFKETGVQNAYFPMLIPKSFLSREAEHVKGFAKECAVVTHYRLKATEDGNAVQVDPNAKLEEELIIRPTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMRTRPFLRTSEFLWQEGHTAHATREEAEKEAQTMLRVYADFAEKWLAVPVVQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPKIAPIQVVIVPIFKGEEQLKELTAKLQPVIDQLRELGITVKYDDTDNKRPGFKFADYELKGVPVRLAMGGRDLENNTIEVMRRDTLEKESLSFDGIVEHIKNLLDDIQANIFKKAKDFRDAHIYECENYDEFKERVKDGGFFLCHWDGTEETEAKIKEDTQATIRCVPYMFEQTPGVDMVSGKPAKYRVIIARSY
>CP023864.1|AUI56207.1|1024197_1024875_-|OmpA-family-protein
MKNMKMMAAGMCLLTVVSCQTKQGTGSLIGGGAGAALGGIVGQIIGHNGKSTAIGAAIGGAVGAGAGALIGRHMDKVAREASQQLPNARVDKVTDANGLDCVKVTFDSGILFPLNGSNLSASAKNDLTKFASLMQRNSNCDVAIQGYTDASGNDNINVPLSQRRAEAVSSYLKGRGVSSRQIRSVQGFGSANPIENKTISQANRRVEVYLYASSEMVRQANNGSL
>CP023864.1|AUI56206.1|1023991_1024222_+|hypothetical-protein
MFLKHEGHILDSSMAKTLYIFVGNKHGVSPLLFQRKRDTASAISLRKDFISKVYWDRRETTVPLYLLITYKEPLFA
>CP023864.1|AUI56711.1|1043849_1046978_+|TonB-dependent-receptor
MSNFMKVSKNRRKHPPFVTGSVAFSFALGLMAVAPSPVLANVDANTSMSVQQQKQSINGVVKDVNGEPVIGASVLANGTPVGVTDVDGRFSISVAPGTELKISYVGFATQSLTVRSGVTSYNITLKDENSALSEVVVVGYGTQKKANLSGSVAQLDGKTLENRPISNVSSGLQGLLPGITVTGADGAPGLDNGSILVRGVGTLNSASPYILIDGVEAGTLNSLDPEDIASISVLKDASSAAIYGSKASNGVILVTTKRGQNGAPKVSYSGYFGIQNATALMDRMNSADAAYYYNKALERSGKAPRFSEEAIQKFRDGSDPYNYPNTDWYGLAFKTAWQNRHSVNITGGNEFVKYLASAGYLKQSSILPNAGREQFNGRANIDMVLSKRITAHLNLAYIQNNYRDASSAYAGGSSDQIIRQLNIIAPWIVYKYEDGTYGTVSDGNPMAWLESGMTVNRNNRNFTGMIGLDYQILKDLKLTLQGAYVDASQRYSYFQKFIQYNPNKASDPNKLEIAHYDWHRTTFDAFLNYDKSFAKHNIKAMLGWHTERYKYLPDWMYRKSFPNNDLTDMNAGDASTQQNAGNTRELAMVSYFGRLNYDYAGRYLFEANFRSDASSRFADGHRWGFFPSFSAAWRVSEEPFMEGSKSWLNNLKLRASWGQLGNQDALNDYYPWMNTYNLNAKYPFGGQLTPGYYQGSYHLETISWERSTTWGVGLDFTLFGGLTGSLDYYNRKTTGIIMDVSAPAEFALGAYKDNIGALRNQGVELSLAYAKQLNKDWTINVGANFSYNKNKILYLGEGTEYVVDKDNRNRRTAIGQQYKSYYMYKATGKFFNSQQEADDYTAKYGNPFGRKFMAGDLIYEDANGDGKLDSNDRIYTKHTDIPAITYGFNLGATWKNIDLSMIWQGVGAVSHIYNREVLGEFSGDASHPSTLWKDSWTDDNHNAKLPRVFETGNSPSDMTRAMSTFWLWNTAYLRLKTLQIGYTLPKSTLKAIGLEKVRIYYAGENLLTFDALPFNIDPEVTSERGSSYPLLRSHSIGINITF
>CP023864.1|AUI56215.1|1047000_1048614_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKTVRTYILAGVAAFALTSCNDYLTTVPKDAMSPSTTWKTSDDAEKFLVGCYDGWEDGGALLYWDAGSDFAYNNFPWEGFTNIGNGSLSPSSPGWSFYDYTIIGRCNTFLENVDKCAFSSEAAKKDLIAQVKAIRAYNYFRMGFLYGGVPIVKPFTSAQEARVPRNTEQEVKDLVFKDLDEAIADINTSPAARGRIAKGAALAMKMRAALYWGDYQKAKDAAQAIIDLGLYELDPDYTNLFKLAGKDSKEIILAVQYKSGTRPLSTIGQLYNNGDGGWSSVVPTQKCVDNYEMSNGMTIDEAGSGYDATHPFHGRDPRMAMTILYPGCDWDGTVFNTLDENVNGKKNPNYPTNAANSSKTALTWRKYLDPKTQYADVWDTEASPIVFRYAEVLLTWAEAENELNGPSANVYAMLDKVRTRVGMPAVDQSKYNTKDKLRELIRRERGSEFAGEGLRRADILRWTSNGKMVAETVLNGPLTRVTGTIDNTATDPTMRAVVSGTSKVEDRSFQTYNRYLPIPQWNISDNPKLEQNPGYAK
>CP023864.1|AUI56712.1|1049859_1050798_+|IS30-family-transposase
MYHQLISEQRSQIFALLQKKTARKEIADIVGISQSTLSREIKRNSTPSGKYIWTKAHDMAMQRRKSTVTNAKLSDELVWRIKEYITNDQWSPRQISGYLRMNEGIEVSHQSIYNIIHNDTTGKLAEHTRHKMKYRHRPKGGHLPIKDRVSIHERSKEVDGKRFGDFEMDLIVDPAQHAILTIVEKSTNMLLMQKLPFGKMSKPLAKVVRKLLLPYKNSLKTITTDNGPEFAAHKDITKYLGVPVYFADPYCSWQKGTVENTNKLIRQYIPKKDSFDNYTDKRIMSIQKKLNERPREKLNFSTPKCEFFKHVL
>CP023864.1|AUI56216.1|1051189_1051654_+|hypothetical-protein
MGPVVVDSWLDRGYKIIGKYKLLNPQPLPLTKSDWLFIHKQLPIWVRKHYPNYRHMPTISQLSIDSLKSNTSYQFTLLHDGKLLEEDVYLLSLPSSNVNHPLKIYIPKASVADEKQLTKDGRLVSKPVLVYPFLTEAWERNINETKPYGIGDMW
>CP023864.1|AUI56217.1|1052064_1052256_-|hypothetical-protein
MERGVVCEVTPTGLLIIGEGLGVRLQMPFGRPMTQSVTAEESDEEVCEKSLQGSELIIRKIGV
>CP023864.1|AUI56218.1|1052638_1054186_+|sulfatase
MQTKVLYGLTGALAMGAVVPAQAQKKPMNIVFIMSDDHSYQTISAYDKRFISTPNIDWLADNGVKFQESFVANSLSGPSRACMLTGKHSHANGFTDNTKTFDGSQQTFPKLLQKQGYQTAMIGKWHLTSLPTGFNYWDILIGQGDYYNPDFLSNGKRIRRSGYVTNIIADMAIDWMEHKRDKTKPFCLLMHNKAPHRVWNPDTCDLRLYDDVTYPLPKTFYDDYAGRLAAQKQKMSIIKDMDLVYDNKMADKENEIHTTTGLEPWGRANYNRMSPSQRAQWDSYYDPIIKKFKEDKLSGKALAEWKYQRYMHDYMRVIHSVDRNVGRVIEYLREHNLLDNTMIVYTSDQGFYMGEHGWFDKRFMYEESFRTPLLIYFPGGKHGVINEMVQNIDYAPTFLDVAGAKIPSDIQGRSFLPLLEGKKPSDWRKSLYYHYYEYPAEHSVCRHYGIRTKRYTLIHFYNDIDSWELYDLKKDPEQMHNIYGKPGTEKLTKNLKKQLLQLQVQYNDPIRNKGL
>CP023864.1|AUI56219.1|1055567_1057955_-|TonB-dependent-receptor
MRRKDIQKYILLLLFIVAAQIVGAQSFTLQGKVSDKDGNPIELASVMVVTQGKLSMTNLKGEFNMQLQSEDSVKVRFSMIGYRTKTRVLVRPKGKQTLLVQLADDNELQEVVVQGKTKQHGTTEELDVQKTKQGPSTSGNAVEELVQTQAGVSTHSELSSQYNVRGGTFDENSVYINNIEVFRPFLVRSGQQEGLSIISPDMVESIGFSSGGFEAKYGDKMSSALDITYKRPKRTEATVSASLLGASAYLGLATKKLTWTNGVRYKTNRYLLGSLQTKGEYRPSFLDYQTYLSWKPNKRWQVDFIGNISENRYDFEPEDRETNFGTLQNVKKFRVYFDGKERDLFRTFFGSLAITRHLSAHTDLSLLASAFTTKEQERYDIQGQYWLTQTETSENLGVGTYMQHSRDYLNANVRSLKLMMQHRMGKHRLEGAVTYKLERIKENSAEYEYRDSAGYNVPHTGRDLKMIYSLRARNELNAKRFESYLQDTWNFQTRDSVPTLFTLNYGVRFAHWDFNGESLFSPRASLTITPGRNRNLSFRLAGGIYYQAPFYKELRDTSIVNGVTYATLNQKIRAQQSIHALAGMTYRFEMMGRPFKFTAEAYYKALSHLVPYSVDNVKVTYYGENTASGHATGLDLKLFGEFVPGADSWLTLSVMNTSMKLNGKRIPLPTDQRYALNLYFTDFFPGTTRWRMSLKLAYADGLPFSAPHKELENNTFRAPAYKRADIGMSYRLLDNHDGRSNTVFKNIWLGIDCLNLFGINNVNSYYWVTDIAGQQYAVPNYLTGRQINGRVTVEF
>CP023864.1|AUI56220.1|1058131_1059004_-|RNA-polymerase-subunit-sigma
MRQLKISKSITNRSSEALDKYLVEIGREPMITVDEEIELAQEIHKGGRKGERAKEKLIKANLRFVVSVAKQYQHQGLSLTDLIDEGNIGLVKAAEKFDETRGFKFISYAVWWIRQSILQAIAEQSRIVRLPLNQVGAISKINQVTNEFVQQHNRRPSIHELAELTGIDEARIRQSQSADNHHMSIDAPFSDDDDNSMSDMLSSGDDSRTDRSVDFESMSDDLRAVLQNTLKDREIKIVTECFGIGCQEKGLEEIGTEMGLTRERVRQIREKAIEKIRESGNARVLMKYLG
>CP023864.1|AUI56221.1|1060561_1061080_-|hypothetical-protein
MIMDTYMFLIPVVAIIIICLMVLYARYVGRKSRGRYAAAAMRFIEKDYPEIDIRDKRYLSTRVDYNIISRHVPVLVVYNSHELHLVPIHALAIPPFYNIRHNDHHAKDMVHLLMDDVKAIVLDRRGRLHIQREEGNDIVLKVGENNVFHENQHEEAVHFLATLKKAADKVVL
>CP023864.1|AUI56222.1|1061536_1064041_-|hypothetical-protein
MKTWKRYLPDVVVVVVFALISFAYFFVPVTQGKILYRHDASAGVGSAQELTEYQNRTGETTRWTNSIFGGMPTYQMSPSYQSTDGLSQVMNAYHLWLPENVWFLFAYLLGFYILLRAFDFRQSLAALGSVMWAFSSYFLIIIAAGHLWKVMALAYLPPMIAGIVLAYRGRYLSGFIVTAIFTAFEVKANHVQMTYYYLFIILFMVIAYLVQAVRQKQLMGFLKATGVLAVAALIGVLINLSSLYHTWQYQKESMRGKSELLKADGANQTSSGLDRDYITQWSYGIDETMTLLVPDAKGGASVPLSKSETAMAKADPQVQSMIPQLYDAFPQYFGTQPGTSGPVYVGAFVLFLFILGLFLVKGATKWALVAATVLSILLSWGHNFMGFTNFFLDYIPMYAKFRTVASILVIAEFTIPLLAALTLKRLVDEPDLLGKKMKYAYISLALTAGVAFLVALFPDMMGPFVSDQERQMLGSVQGMDANTAGTILSNISTMRAAMVSADAWRSVVIILIGFALLFVYKMKKLRADYMVAALLVLCLVDMWQVDKRYLNDEMFVPKSERDMPQQPTAADTEIDKDKSLDYRVLNFASNTFNENETSYFHKSIGGYHPAKLRRYQEMIDAYIAPEMQKTMQAIAATGGNMRAVDGVKTFPVLNMLNTKYFILPLQGGQTAPLLNPYAQGNGWFVDKLTFVDDANAEYAAVGKIDVRHEAVADKKFEAALGQAKANDSTAFVKLDKYEPNNLQYTVSSRNGGVVVFSEVYYPGWKATIDGQPAEIGRVNYILRAVSVKPGKHTVVLDFHPTSISTTETIAYIAIVILLLAIAGAGYVEWKKRGK

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Crispr_ID: CP023864_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_9

1049135-1049229

Orphan

Consensus_repeat	Method
GGGGCGTGATCACCGAGATACCCCTATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_9

>merge|CP023864|9|1049135-1049229|CRISPRCasFinder
GGGGCGTGATCACCGAGATACCCCTATAAGTTAGAGGCCCCTCCCCCGTCCCCTCCCCCGAAGGGAAGGGGAGTGATCACCGAGATACCCCTATA

>CP023864|9|6|1049135-1049229|CRISPRCasFinder
GGGGCGTGATCACCGAGATACCCCTATA	AGTTAGAGGCCCCTCCCCCGTCCCCTCCCCCGAAGGGAA
GGGGAGTGATCACCGAGATACCCCTATA

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56220.1\|1058131_1059004_-\|RNA-polymerase-subunit-sigma	unknown	unknown	gnl\|CDD\|223642
CP023864.1\|AUI56221.1\|1060561_1061080_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56223.1\|1064147_1064864_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	unknown	unknown	gnl\|CDD\|350159
CP023864.1\|AUI56218.1\|1052638_1054186_+\|sulfatase	unknown	unknown	gnl\|CDD\|293755
CP023864.1\|AUI56208.1\|1025252_1026734_+\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236327
CP023864.1\|AUI56210.1\|1031666_1033124_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56214.1\|1038936_1041255_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56213.1\|1037397_1038927_+\|carbohydrate-binding-protein	unknown	unknown	gnl\|CDD\|226195
CP023864.1\|AUI56219.1\|1055567_1057955_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
CP023864.1\|AUI56712.1\|1049859_1050798_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
CP023864.1\|AUI56216.1\|1051189_1051654_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56217.1\|1052064_1052256_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56215.1\|1047000_1048614_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|369630
CP023864.1\|AUI56209.1\|1026870_1027806_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56212.1\|1034678_1035758_+\|DUF4876-domain-containing-protein	unknown	unknown	gnl\|CDD\|379795
CP023864.1\|AUI56222.1\|1061536_1064041_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370572
CP023864.1\|AUI56711.1\|1043849_1046978_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
CP023864.1\|AUI56224.1\|1065120_1065609_+\|S-ribosylhomocysteine-lyase	unknown	unknown	gnl\|CDD\|376888
CP023864.1\|AUI56710.1\|1029241_1031650_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
CP023864.1\|AUI56211.1\|1033139_1034546_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56220.1\|1058131_1059004_-\|RNA-polymerase-subunit-sigma	gnl\|CDD\|223642	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription].	5.18423e-81
CP023864.1\|AUI56224.1\|1065120_1065609_+\|S-ribosylhomocysteine-lyase	gnl\|CDD\|376888	pfam02664, LuxS, S-Ribosylhomocysteinase (LuxS). This family consists of the LuxS protein involved in autoinducer AI2 synthesis and its hypothetical relatives. S-ribosylhomocysteinase (LuxS) catalyzes the cleavage of the thioether bond in S-ribosylhomocysteine (SRH) to produce homocysteine and 4,5-dihydroxy-2,3-pentanedione (DPD), the precursor of type II bacterial quorum sensing molecule.	9.61003e-88
CP023864.1\|AUI56218.1\|1052638_1054186_+\|sulfatase	gnl\|CDD\|293755	cd16031, G6S_like, unchracterized sulfatase homologous to glucosamine (N-acetyl)-6-sulfatase(G6S, GNS). N-acetylglucosamine-6-sulfatase also known as glucosamine (N-acetyl)-6-sulfatase hydrolyzes of the 6-sulfate groups of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate. Deficiency of N-acetylglucosamine-6-sulfatase results in the disease of Sanfilippo Syndrome type IIId or Mucopolysaccharidosis III (MPS-III), a rare autosomal recessive lysosomal storage disease.	0
CP023864.1\|AUI56208.1\|1025252_1026734_+\|proline--tRNA-ligase	gnl\|CDD\|236327	PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional.	0
CP023864.1\|AUI56219.1\|1055567_1057955_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.89017e-17
CP023864.1\|AUI56213.1\|1037397_1038927_+\|carbohydrate-binding-protein	gnl\|CDD\|226195	COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate transport and metabolism].	9.32146e-31
CP023864.1\|AUI56223.1\|1064147_1064864_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	gnl\|CDD\|350159	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases. This subfamily includes both bacterial and plant 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidases (MTANs): bacterial MTANs show comparable efficiency in hydrolyzing MTA and SAH, while plant enzymes are highly specific for MTA and are unable to metabolize SAH or show significantly reduced activity towards SAH. MTAN is involved in methionine and S-adenosyl-methionine recycling, polyamine biosynthesis, and bacterial quorum sensing. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	8.16943e-80
CP023864.1\|AUI56712.1\|1049859_1050798_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	9.27633e-67
CP023864.1\|AUI56215.1\|1047000_1048614_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|369630	pfam07980, SusD_RagB, SusD family. This domain is found in bacterial cell surface proteins such SusD and SusD-like proteins, as as well RagB, outer membrane surface receptor antigen. Bacteroidetes, one of the two dominant bacterial phyla in the human gut, are Gram-negative saccharolytic microorganisms that utilize a diverse array of glycans. Hence, they express starch-utilization system (Sus) for glycan uptake. SusD has 551 amino acids, and is almost entirely alpha-helical, with 22 alpha-helices, eight of which form 4 tetra-trico peptide repeats (TPRs: helix-turn-helix motifs involved in protein-protein interactions). The four TPRs pack together to create a right-handed super-helix. This is predicted to mediate the formation of SusD and SusC porin complex at the cell surface. The interaction between SusC and TPR1/TPR2 region of SusD is predicted to be of functional importance since it allows SusD to be in position for oligosaccharide capture from other Sus lipoproteins and delivery of these glycans to the SusC porin. The non-TPR containing portion of SusD is where starch binding occurs. The binding site is a shallow surface cavity located on top of TPR1. SusD homologs such as SusD-like proteins have a critical role in carbohydrate acquisition. Both SusD and its homologs, contain about 15-20 residues at the N-terminus that might be a flexible linker region, anchoring the protein to the membrane and the glycan-binding domain. Other homologs to SusD have been examined in Porphyromonas gingivalis such as RagB, an immunodominant outer-membrane surface receptor antigen. Structural characterization of RagB shows substantial similarity with Bacteroides thetaiotaomicron SusD (i.e alpha-helices and TPR regions). Based on this structural similarity, functional studies suggest that, RagB binding of glycans occurs at pockets on the molecular surface that are distinct from those of SusD.	1.79719e-57
CP023864.1\|AUI56212.1\|1034678_1035758_+\|DUF4876-domain-containing-protein	gnl\|CDD\|379795	pfam16215, DUF4876, Protein of unknown function (DUF4876). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 392 and 433 amino acids in length. There is a conserved NNS sequence motif.	1.5017e-16
CP023864.1\|AUI56222.1\|1061536_1064041_-\|hypothetical-protein	gnl\|CDD\|370572	pfam09586, YfhO, Bacterial membrane protein YfhO. This protein is a conserved membrane protein. The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system. Some members of this family have been annotated as glycosyl transferases of the PMT family.	4.56783e-09
CP023864.1\|AUI56711.1\|1043849_1046978_+\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
CP023864.1\|AUI56710.1\|1029241_1031650_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.99923e-38

>CP023864.1|AUI56215.1|1047000_1048614_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKTVRTYILAGVAAFALTSCNDYLTTVPKDAMSPSTTWKTSDDAEKFLVGCYDGWEDGGALLYWDAGSDFAYNNFPWEGFTNIGNGSLSPSSPGWSFYDYTIIGRCNTFLENVDKCAFSSEAAKKDLIAQVKAIRAYNYFRMGFLYGGVPIVKPFTSAQEARVPRNTEQEVKDLVFKDLDEAIADINTSPAARGRIAKGAALAMKMRAALYWGDYQKAKDAAQAIIDLGLYELDPDYTNLFKLAGKDSKEIILAVQYKSGTRPLSTIGQLYNNGDGGWSSVVPTQKCVDNYEMSNGMTIDEAGSGYDATHPFHGRDPRMAMTILYPGCDWDGTVFNTLDENVNGKKNPNYPTNAANSSKTALTWRKYLDPKTQYADVWDTEASPIVFRYAEVLLTWAEAENELNGPSANVYAMLDKVRTRVGMPAVDQSKYNTKDKLRELIRRERGSEFAGEGLRRADILRWTSNGKMVAETVLNGPLTRVTGTIDNTATDPTMRAVVSGTSKVEDRSFQTYNRYLPIPQWNISDNPKLEQNPGYAK
>CP023864.1|AUI56711.1|1043849_1046978_+|TonB-dependent-receptor
MSNFMKVSKNRRKHPPFVTGSVAFSFALGLMAVAPSPVLANVDANTSMSVQQQKQSINGVVKDVNGEPVIGASVLANGTPVGVTDVDGRFSISVAPGTELKISYVGFATQSLTVRSGVTSYNITLKDENSALSEVVVVGYGTQKKANLSGSVAQLDGKTLENRPISNVSSGLQGLLPGITVTGADGAPGLDNGSILVRGVGTLNSASPYILIDGVEAGTLNSLDPEDIASISVLKDASSAAIYGSKASNGVILVTTKRGQNGAPKVSYSGYFGIQNATALMDRMNSADAAYYYNKALERSGKAPRFSEEAIQKFRDGSDPYNYPNTDWYGLAFKTAWQNRHSVNITGGNEFVKYLASAGYLKQSSILPNAGREQFNGRANIDMVLSKRITAHLNLAYIQNNYRDASSAYAGGSSDQIIRQLNIIAPWIVYKYEDGTYGTVSDGNPMAWLESGMTVNRNNRNFTGMIGLDYQILKDLKLTLQGAYVDASQRYSYFQKFIQYNPNKASDPNKLEIAHYDWHRTTFDAFLNYDKSFAKHNIKAMLGWHTERYKYLPDWMYRKSFPNNDLTDMNAGDASTQQNAGNTRELAMVSYFGRLNYDYAGRYLFEANFRSDASSRFADGHRWGFFPSFSAAWRVSEEPFMEGSKSWLNNLKLRASWGQLGNQDALNDYYPWMNTYNLNAKYPFGGQLTPGYYQGSYHLETISWERSTTWGVGLDFTLFGGLTGSLDYYNRKTTGIIMDVSAPAEFALGAYKDNIGALRNQGVELSLAYAKQLNKDWTINVGANFSYNKNKILYLGEGTEYVVDKDNRNRRTAIGQQYKSYYMYKATGKFFNSQQEADDYTAKYGNPFGRKFMAGDLIYEDANGDGKLDSNDRIYTKHTDIPAITYGFNLGATWKNIDLSMIWQGVGAVSHIYNREVLGEFSGDASHPSTLWKDSWTDDNHNAKLPRVFETGNSPSDMTRAMSTFWLWNTAYLRLKTLQIGYTLPKSTLKAIGLEKVRIYYAGENLLTFDALPFNIDPEVTSERGSSYPLLRSHSIGINITF
>CP023864.1|AUI56214.1|1038936_1041255_+|hypothetical-protein
MRNSMKKNILAACGLLFCSSLLHAQTTDEVRIDFENQDYQAIGVYDTWLKSPFRSHDGQPATLQGNVQVVSNIDKNYDDVLKSTPNASDKVLGFQRSRYGSNTFGARIDLKQPFALTKETKYVHVMIHKPKAGRTMLIGLGKRTDRPGQSADTEQFWEFSTKEIEPNKWVDAVFPVKGAGGIDIHSLVVVVDCEDSNGLKDDFLAYIDNIVVNNEAFTTTNREDYPMNYNKDQKCTRTDRGLKGISLGNQSIAVYGDISSSTPAYTYLSKRAFWAKPGETLTPAVQYKGIWMHSYVYVDLNNNGRFEPKVEAGQIVPDAGNELMAYSFLSASDENSGFNSAGTEISGNGRNTLSMPAFTLPDTLQHGFYRMRYKVDWNSSDAGGSIETNNHIINNGGGAMDIRLNVHGDNVTITQGALNGKVVAADDTELNNLSIPFGQPFTIKMKPEHGFNFNGLRVRHGYNLTGDSLSHGTYQYVDELVPRERFNEDGTFTLPAEMIDGDVSLEGIFIDAKTTLTYEVYFNNKFVYSTAVNGAKTGAVTIPESLNRDFVELSSDTQTVTSLPATVRINAMWTGPMKVATATDTTWYNLKVSSQPKWVSSRTYAPNVYFIDQSDTDKDAALWALTGDPYSGFHLINKAVGPTHVLASASPKGSGNAGGFTFATLESASELPIGYTSGWFLNVSPNDEAGFYICNPEGYGLNYRANNNLAYWTGGKDGGSTFVPTEVKKTSTGISSLTLQQDATTTYDLTGRSVGKNHRGIVIRNGKKLLIK
>CP023864.1|AUI56213.1|1037397_1038927_+|carbohydrate-binding-protein
MNNRFLHGVLTALALTATATSFAQNPTVMTLQTQVAPNPENEPRPVFPVPSDRQWQWQQTEFYAFFHYGMNTYVNEEWGKGNESPNSFAPTEKPDPRQWLEAVQAAGMKGGIAVVKHHDGFCLWPTASTDYNISHSSSPNAQGVNIAELFAKAAQELHMKYGFYVSPWDRNNGQYGTDSYVKDVFLKQCAELAKYGSDQFEMWFDGANGGDGYYGGKNTTIHIDRSTYYDVPNLRDSIHKLSPNIILWGVGGEARWIGNEDGWAGETNWCNENRGVAPERNGMYGTENGWFWLPGESDAKFTNPGWFWSQKSKPMTAERTFQMYLETVGRNSTLILNCPPDRSGKLPQDQVSRLKEFGKMLKSRFQTNLAKSATIEASSTRAHGATRSYAANNLIDENPDTYWAAEDDVKDVTLTLKWNNPQTVRYVTLQEYVRLGQRVKSFSVEYTTDGSTWKPLANKVKQTTIGYKRIIPLNGSTANSYGSGYEARAIRIHIKDAKACPVMSEIAIY
>CP023864.1|AUI56212.1|1034678_1035758_+|DUF4876-domain-containing-protein
MIQKKIAACLLIGLMLLAMSSCTRNEMPVKQSTSKTKLDHLIIKEVFYVGHYWYRDVRAWGMKNMNQMYNDDQYITIFNPTDEVKYLDGLALCVNAIDPSKAIQFAPKDDFVNRYYGASGISYFPGKGNDYPVKPGQTIIVAKYAIDHKASFEAELEGEDLSMYGGLNAFLDLSKADFEWTNINYDPGQKNNPNVPDMCAILTSTDASGNIGPSYDFSRVSESNGIALIKLPWTPEEFKKNYAETKDSKGYLHYITVTSSAHGDFYAIEVPLECVIDCITICPRRMFQMRPSKLDRGYNAVTDNSFSGLKQSDYPISSGLALVRKWDGKKFVDDNNTTADFEVKVASLSRKDEKGNPIK
>CP023864.1|AUI56211.1|1033139_1034546_+|hypothetical-protein
MNKIVKNILLLSCLAVVFASCDDFVFGNVHVDYNENPLESKGLARSGADRYVDSLSKIKVSEQVNNPDPDGAFNGWATCLAMFKEGHSHGDGMMHGNFVYHNAPWKQEEFVIIRNNTAKWPTVEVQRQSTVTYLEQSDGKTGPDYIRIIGGKLKRWGLCLYFFNKEGKLMNDDILDHSDEYQIFFTVSEVDDKGNPYEVMDCRGTWKPKKNKFGDWKKGGTIDTTPVPSPFFANTTTWKERAERTPKIFEYTYRDTWIHNAMADGARELFNQRLLPPLTREDADWAVAPYDQDRVGLKGHFNFDIEADENDALHEEWPLEITRRLDPATGETGHYTRPSYLLPKFYLSVRVMKCPKGKKALIPKDEYLSRHSTYVFRSPYICSEAYNPDEPKEYGADSEWKELFRFNIPIKVFCSSFDTDPTTIDPNDPLYFYLGHEIGLSPLDALEASQNVQTHGIGGGSGFGNWFL
>CP023864.1|AUI56210.1|1031666_1033124_+|hypothetical-protein
MKLYKDIRLILATAAVGLVFGSCSNDQVDDFFKKIIQAPPSSIERDVKGHEQIYAVHAILRMGYKGGMIGVGPDGNDSIQAYNTYHLVSSSTSIPVMQEIDIAKDDDGQMTITTERDCFDVIASDDIYYGLELKYYDQNGMLINHQFSGYPFMKDKEGYNVPDEDNATLLVHQHFFGIGNASLDKLVADSTSSGHEKAVQGMQMAYPRSLASIPTYYDRYTFKEQGGAMEAATKFSTSNIYVPDGYTFGLNQVPFNSELAWRAIEVSGKPEALQPFTFGGKTYHLYKTIDPMELNKITPEVFTYEYRDTDPVEEELGKLFTEAYNDDFTDPDTEAPRQRYGHTVGLLHQKRSLDVGSDLDRLGFKGVMQFHKSDIAFQLQVRICHILNKGQQHVGESEKPAKYCNTNNSEHSFLWDFNQLQPGWDSFDIDYPLSVRVIANTKDGEDKCFEDVKRFYPAANKAQLWRMLTRPQDFFTQYRQNVVLM
>CP023864.1|AUI56710.1|1029241_1031650_+|TonB-dependent-receptor
MNYERRARYYLSATLLSSLFLFPPTYVHATSVHGQETVEDEDKDVKTSVTVRVVSEQSQEPLIGAVVRCEGVSNPSVTDIDGKCTIKLKRAADRIKLTVTYVGYKSVTRVVNVPDSRMITLQLKDDSKQLDNVTVTALKRHTTVLQQSSAISQEALEKGGATSLAKLLETIPGVSSISTGNTIAKPVIQGMHSSRILLMNNGVRLESQSWGADHAPELDYTGSSMVEVVKGAECIRYGFGAMGGVVLLNDAPLPYENKKIKVNGNVNVGYDTNARGFSGSGTVETGYKQFGLRLHGMYTKGGDYHTADYVLNNTGYNTISFSALAGWQGRKLTATLFSSIYYQRSGIYYASKISDLSQLIKRFEYGRPDPETVKPFSYDIKPPFQQSQHVTLKGELKWELNPNHHLNLTLSFQENLRQEFENRKKTQWSWIPMQDLILKTYKFDVLWQAKWKLWKMTTDAGLSNTYQTNFNYPGTKQPAFVPNFAALSMGGYFLHKAEFGRLQCALGMRYDFRVLSVNGYSSLSNYTYYDDFKLYSNFTMSLATHYQFSDKWDARANIGWSWRPPDINELYAIGLQDGSYWVVGNKNLASERGYKLVLGTKYRNTWFSVEPSFFFQRINSYIYDHIGEGKDRFHNHPSGKYPKFIYDQDDVKLYGGDIEATVKPVRGLTFVGKGEWMFARNLTHNDWLPFMPSDRYGLSATYELPLKKPQKYRSSLSLSGIYVTKQTRFDPDKDLVPDSPPAYFLLNGTAELRIGLPQNKELKFMIVGDNILNALYKEYTDRFRYYAHERGANFSLRTLFKF
>CP023864.1|AUI56209.1|1026870_1027806_+|hypothetical-protein
MKKSLLTFVFLLALTALNAQTLIKAKFQKGEQATYSTVSEAKLSTPMGGGDQSLKTSSNTVITVKEANADGYVIELKTKDVKTEGDQSTALQTQTIVSQYFGNVPMRVKTDANGKVTDILNFEEVQASVSKLVMAFIDSIYKEKPQLEQSLPKYKMAMSLNNMLTKQTFIEIMEHSTFFNLFGKTLKTGDKEDVNQQGIKSIVTYEVTKEPNELVIIGKTQNNMSEDDVKGFLIDKMKLMGSDESMIAKFEQGWLMMKKMGLTKMDGAGTITTRLLPSGWATEYSSSIKSKVMGAVMTTNSVSKLVGHNWK
>CP023864.1|AUI56208.1|1025252_1026734_+|proline--tRNA-ligase
MAKELKELTKRADNYSQWYNDLVIKADLIEQSAVRGCMVIKPYGYAIWEKIQAQLDKMFKETGVQNAYFPMLIPKSFLSREAEHVKGFAKECAVVTHYRLKATEDGNAVQVDPNAKLEEELIIRPTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMRTRPFLRTSEFLWQEGHTAHATREEAEKEAQTMLRVYADFAEKWLAVPVVQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPKIAPIQVVIVPIFKGEEQLKELTAKLQPVIDQLRELGITVKYDDTDNKRPGFKFADYELKGVPVRLAMGGRDLENNTIEVMRRDTLEKESLSFDGIVEHIKNLLDDIQANIFKKAKDFRDAHIYECENYDEFKERVKDGGFFLCHWDGTEETEAKIKEDTQATIRCVPYMFEQTPGVDMVSGKPAKYRVIIARSY
>CP023864.1|AUI56712.1|1049859_1050798_+|IS30-family-transposase
MYHQLISEQRSQIFALLQKKTARKEIADIVGISQSTLSREIKRNSTPSGKYIWTKAHDMAMQRRKSTVTNAKLSDELVWRIKEYITNDQWSPRQISGYLRMNEGIEVSHQSIYNIIHNDTTGKLAEHTRHKMKYRHRPKGGHLPIKDRVSIHERSKEVDGKRFGDFEMDLIVDPAQHAILTIVEKSTNMLLMQKLPFGKMSKPLAKVVRKLLLPYKNSLKTITTDNGPEFAAHKDITKYLGVPVYFADPYCSWQKGTVENTNKLIRQYIPKKDSFDNYTDKRIMSIQKKLNERPREKLNFSTPKCEFFKHVL
>CP023864.1|AUI56216.1|1051189_1051654_+|hypothetical-protein
MGPVVVDSWLDRGYKIIGKYKLLNPQPLPLTKSDWLFIHKQLPIWVRKHYPNYRHMPTISQLSIDSLKSNTSYQFTLLHDGKLLEEDVYLLSLPSSNVNHPLKIYIPKASVADEKQLTKDGRLVSKPVLVYPFLTEAWERNINETKPYGIGDMW
>CP023864.1|AUI56217.1|1052064_1052256_-|hypothetical-protein
MERGVVCEVTPTGLLIIGEGLGVRLQMPFGRPMTQSVTAEESDEEVCEKSLQGSELIIRKIGV
>CP023864.1|AUI56218.1|1052638_1054186_+|sulfatase
MQTKVLYGLTGALAMGAVVPAQAQKKPMNIVFIMSDDHSYQTISAYDKRFISTPNIDWLADNGVKFQESFVANSLSGPSRACMLTGKHSHANGFTDNTKTFDGSQQTFPKLLQKQGYQTAMIGKWHLTSLPTGFNYWDILIGQGDYYNPDFLSNGKRIRRSGYVTNIIADMAIDWMEHKRDKTKPFCLLMHNKAPHRVWNPDTCDLRLYDDVTYPLPKTFYDDYAGRLAAQKQKMSIIKDMDLVYDNKMADKENEIHTTTGLEPWGRANYNRMSPSQRAQWDSYYDPIIKKFKEDKLSGKALAEWKYQRYMHDYMRVIHSVDRNVGRVIEYLREHNLLDNTMIVYTSDQGFYMGEHGWFDKRFMYEESFRTPLLIYFPGGKHGVINEMVQNIDYAPTFLDVAGAKIPSDIQGRSFLPLLEGKKPSDWRKSLYYHYYEYPAEHSVCRHYGIRTKRYTLIHFYNDIDSWELYDLKKDPEQMHNIYGKPGTEKLTKNLKKQLLQLQVQYNDPIRNKGL
>CP023864.1|AUI56219.1|1055567_1057955_-|TonB-dependent-receptor
MRRKDIQKYILLLLFIVAAQIVGAQSFTLQGKVSDKDGNPIELASVMVVTQGKLSMTNLKGEFNMQLQSEDSVKVRFSMIGYRTKTRVLVRPKGKQTLLVQLADDNELQEVVVQGKTKQHGTTEELDVQKTKQGPSTSGNAVEELVQTQAGVSTHSELSSQYNVRGGTFDENSVYINNIEVFRPFLVRSGQQEGLSIISPDMVESIGFSSGGFEAKYGDKMSSALDITYKRPKRTEATVSASLLGASAYLGLATKKLTWTNGVRYKTNRYLLGSLQTKGEYRPSFLDYQTYLSWKPNKRWQVDFIGNISENRYDFEPEDRETNFGTLQNVKKFRVYFDGKERDLFRTFFGSLAITRHLSAHTDLSLLASAFTTKEQERYDIQGQYWLTQTETSENLGVGTYMQHSRDYLNANVRSLKLMMQHRMGKHRLEGAVTYKLERIKENSAEYEYRDSAGYNVPHTGRDLKMIYSLRARNELNAKRFESYLQDTWNFQTRDSVPTLFTLNYGVRFAHWDFNGESLFSPRASLTITPGRNRNLSFRLAGGIYYQAPFYKELRDTSIVNGVTYATLNQKIRAQQSIHALAGMTYRFEMMGRPFKFTAEAYYKALSHLVPYSVDNVKVTYYGENTASGHATGLDLKLFGEFVPGADSWLTLSVMNTSMKLNGKRIPLPTDQRYALNLYFTDFFPGTTRWRMSLKLAYADGLPFSAPHKELENNTFRAPAYKRADIGMSYRLLDNHDGRSNTVFKNIWLGIDCLNLFGINNVNSYYWVTDIAGQQYAVPNYLTGRQINGRVTVEF
>CP023864.1|AUI56220.1|1058131_1059004_-|RNA-polymerase-subunit-sigma
MRQLKISKSITNRSSEALDKYLVEIGREPMITVDEEIELAQEIHKGGRKGERAKEKLIKANLRFVVSVAKQYQHQGLSLTDLIDEGNIGLVKAAEKFDETRGFKFISYAVWWIRQSILQAIAEQSRIVRLPLNQVGAISKINQVTNEFVQQHNRRPSIHELAELTGIDEARIRQSQSADNHHMSIDAPFSDDDDNSMSDMLSSGDDSRTDRSVDFESMSDDLRAVLQNTLKDREIKIVTECFGIGCQEKGLEEIGTEMGLTRERVRQIREKAIEKIRESGNARVLMKYLG
>CP023864.1|AUI56221.1|1060561_1061080_-|hypothetical-protein
MIMDTYMFLIPVVAIIIICLMVLYARYVGRKSRGRYAAAAMRFIEKDYPEIDIRDKRYLSTRVDYNIISRHVPVLVVYNSHELHLVPIHALAIPPFYNIRHNDHHAKDMVHLLMDDVKAIVLDRRGRLHIQREEGNDIVLKVGENNVFHENQHEEAVHFLATLKKAADKVVL
>CP023864.1|AUI56222.1|1061536_1064041_-|hypothetical-protein
MKTWKRYLPDVVVVVVFALISFAYFFVPVTQGKILYRHDASAGVGSAQELTEYQNRTGETTRWTNSIFGGMPTYQMSPSYQSTDGLSQVMNAYHLWLPENVWFLFAYLLGFYILLRAFDFRQSLAALGSVMWAFSSYFLIIIAAGHLWKVMALAYLPPMIAGIVLAYRGRYLSGFIVTAIFTAFEVKANHVQMTYYYLFIILFMVIAYLVQAVRQKQLMGFLKATGVLAVAALIGVLINLSSLYHTWQYQKESMRGKSELLKADGANQTSSGLDRDYITQWSYGIDETMTLLVPDAKGGASVPLSKSETAMAKADPQVQSMIPQLYDAFPQYFGTQPGTSGPVYVGAFVLFLFILGLFLVKGATKWALVAATVLSILLSWGHNFMGFTNFFLDYIPMYAKFRTVASILVIAEFTIPLLAALTLKRLVDEPDLLGKKMKYAYISLALTAGVAFLVALFPDMMGPFVSDQERQMLGSVQGMDANTAGTILSNISTMRAAMVSADAWRSVVIILIGFALLFVYKMKKLRADYMVAALLVLCLVDMWQVDKRYLNDEMFVPKSERDMPQQPTAADTEIDKDKSLDYRVLNFASNTFNENETSYFHKSIGGYHPAKLRRYQEMIDAYIAPEMQKTMQAIAATGGNMRAVDGVKTFPVLNMLNTKYFILPLQGGQTAPLLNPYAQGNGWFVDKLTFVDDANAEYAAVGKIDVRHEAVADKKFEAALGQAKANDSTAFVKLDKYEPNNLQYTVSSRNGGVVVFSEVYYPGWKATIDGQPAEIGRVNYILRAVSVKPGKHTVVLDFHPTSISTTETIAYIAIVILLLAIAGAGYVEWKKRGK
>CP023864.1|AUI56223.1|1064147_1064864_+|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase
MKIGIIVAMDKEFEQLKAILAHSQTEHFNHKDFVSGQLGEKTVILQQCGIGKVNAAIGAVEMINRFHPDLIISSGCAGGADTSLEVTDVVVAKECAYHDAYCGDEVAYGQIIGMPSRFKAPVKLIERALSLNSQTDGEGLHIKAGLTVSGEWFVNSREKMREIMAHFPEATAVDMESCAIAQVCHIYQTPFVSFRVISDVPLKDHKASQYYDFWERIANGSFEVTRRFVEGIEAGDGC
>CP023864.1|AUI56224.1|1065120_1065609_+|S-ribosylhomocysteine-lyase
MNKIPSFTIDHERLLRGIYVSRKDEVGNETVTTFDIRMKEPNREPVLHVGAIHAIEHLAATFLRNDPEWKDRVIYWGPMGCLTGNYLILRGDLASKDVVDLMRRTFQFVADFEGDIPGAAPRDCGNYLLHDLPMAKWESRKFLTEVLNNITDANLNYPEKEE

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Crispr_ID: CP023864_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_10

1059161-1059252

Orphan

Consensus_repeat	Method
GGCTACGAGGCAGTGCCTCGTAGAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_10

>merge|CP023864|10|1059161-1059252|CRISPRCasFinder
GGCTACGAGGCAGTGCCTCGTAGAACCGAAGAGCAGGCGACGAGAGTAGGGACAGCAGGGGTCGGAGGCTACGAGGCAGTGCCTCGTAGAAC

>CP023864|10|7|1059161-1059252|CRISPRCasFinder
GGCTACGAGGCAGTGCCTCGTAGAAC	CGAAGAGCAGGCGACGAGAGTAGGGACAGCAGGGGTCGGA
GGCTACGAGGCAGTGCCTCGTAGAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56220.1\|1058131_1059004_-\|RNA-polymerase-subunit-sigma	unknown	unknown	gnl\|CDD\|223642
CP023864.1\|AUI56225.1\|1065634_1065844_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56224.1\|1065120_1065609_+\|S-ribosylhomocysteine-lyase	unknown	unknown	gnl\|CDD\|376888
CP023864.1\|AUI56223.1\|1064147_1064864_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	unknown	unknown	gnl\|CDD\|350159
CP023864.1\|AUI56218.1\|1052638_1054186_+\|sulfatase	unknown	unknown	gnl\|CDD\|293755
CP023864.1\|AUI56226.1\|1067412_1067928_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377578
CP023864.1\|AUI56221.1\|1060561_1061080_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56214.1\|1038936_1041255_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56213.1\|1037397_1038927_+\|carbohydrate-binding-protein	unknown	unknown	gnl\|CDD\|226195
CP023864.1\|AUI56219.1\|1055567_1057955_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
CP023864.1\|AUI56712.1\|1049859_1050798_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
CP023864.1\|AUI56229.1\|1076367_1079397_-\|endo-beta-N-acetylglucosaminidase	unknown	unknown	gnl\|CDD\|227068
CP023864.1\|AUI56215.1\|1047000_1048614_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|369630
CP023864.1\|AUI56228.1\|1072193_1075940_-\|endo-beta-N-acetylglucosaminidase	unknown	unknown	gnl\|CDD\|227068
CP023864.1\|AUI56230.1\|1079496_1081329_-\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	unknown	unknown	gnl\|CDD\|372283
CP023864.1\|AUI56227.1\|1068213_1071993_-\|glycosyl-hydrolase-family-85	unknown	unknown	gnl\|CDD\|227068
CP023864.1\|AUI56222.1\|1061536_1064041_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370572
CP023864.1\|AUI56711.1\|1043849_1046978_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
CP023864.1\|AUI56217.1\|1052064_1052256_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56216.1\|1051189_1051654_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56220.1\|1058131_1059004_-\|RNA-polymerase-subunit-sigma	gnl\|CDD\|223642	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription].	5.18423e-81
CP023864.1\|AUI56224.1\|1065120_1065609_+\|S-ribosylhomocysteine-lyase	gnl\|CDD\|376888	pfam02664, LuxS, S-Ribosylhomocysteinase (LuxS). This family consists of the LuxS protein involved in autoinducer AI2 synthesis and its hypothetical relatives. S-ribosylhomocysteinase (LuxS) catalyzes the cleavage of the thioether bond in S-ribosylhomocysteine (SRH) to produce homocysteine and 4,5-dihydroxy-2,3-pentanedione (DPD), the precursor of type II bacterial quorum sensing molecule.	9.61003e-88
CP023864.1\|AUI56218.1\|1052638_1054186_+\|sulfatase	gnl\|CDD\|293755	cd16031, G6S_like, unchracterized sulfatase homologous to glucosamine (N-acetyl)-6-sulfatase(G6S, GNS). N-acetylglucosamine-6-sulfatase also known as glucosamine (N-acetyl)-6-sulfatase hydrolyzes of the 6-sulfate groups of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate. Deficiency of N-acetylglucosamine-6-sulfatase results in the disease of Sanfilippo Syndrome type IIId or Mucopolysaccharidosis III (MPS-III), a rare autosomal recessive lysosomal storage disease.	0
CP023864.1\|AUI56219.1\|1055567_1057955_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.89017e-17
CP023864.1\|AUI56226.1\|1067412_1067928_-\|hypothetical-protein	gnl\|CDD\|377578	pfam05962, HutD, HutD. HutD from Pseudomonas fluorescens SBW25 is a component of the histidine uptake and utilisation operon. HutD is operonic with the well characterized repressor protein HutC. Genetic analysis using transcriptional fusions (lacZ) and deletion mutants shows that hutD is necessary to maintain fitness in environments replete with histidine. Evidence outlined by Zhang & Rainey (2007) suggests that HutD functions as a governor that sets an upper bound on the level of hut operon transcription. The mechanistic basis is unknown, but in silico molecular docking studies based on the crystal structure of PA5104 (HutD from Pseudomonas aeruginosa) show that urocanate (the first breakdown product of histidine) docks with the active site of HutD.	1.86991e-16
CP023864.1\|AUI56223.1\|1064147_1064864_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	gnl\|CDD\|350159	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases. This subfamily includes both bacterial and plant 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidases (MTANs): bacterial MTANs show comparable efficiency in hydrolyzing MTA and SAH, while plant enzymes are highly specific for MTA and are unable to metabolize SAH or show significantly reduced activity towards SAH. MTAN is involved in methionine and S-adenosyl-methionine recycling, polyamine biosynthesis, and bacterial quorum sensing. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	8.16943e-80
CP023864.1\|AUI56712.1\|1049859_1050798_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	9.27633e-67
CP023864.1\|AUI56230.1\|1079496_1081329_-\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	gnl\|CDD\|372283	pfam12741, SusD-like, Susd and RagB outer membrane lipoprotein. This is a family of SusD-like proteins, one member of which, BT1043, is an outer membrane lipoprotein involved in host glycan metabolism. The structures of this and SusD-homologs in the family are dominated by tetratrico peptide repeats that may facilitate association with outer membrane beta-barrel transporters required for glycan uptake. The structure of BT1043 complexed with N-acetyllactosamine reveals that recognition is mediated via hydrogen bonding interactions with the reducing end of beta-N-acetylglucosamine, suggesting a role in binding glycans liberated from the mucin polypeptide. Mammalian distal gut bacteria have an expanded capacity to utilize glycans. In the absence of dietary sources, some species rely on host-derived mucosal glycans. The ability of Bacteroides thetaiotaomicron, a prominent human gut symbiont, to forage host glycans contributes to both its ability to persist within an individual host and its ability to be transmitted naturally to new hosts at birth.	4.89415e-101
CP023864.1\|AUI56215.1\|1047000_1048614_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|369630	pfam07980, SusD_RagB, SusD family. This domain is found in bacterial cell surface proteins such SusD and SusD-like proteins, as as well RagB, outer membrane surface receptor antigen. Bacteroidetes, one of the two dominant bacterial phyla in the human gut, are Gram-negative saccharolytic microorganisms that utilize a diverse array of glycans. Hence, they express starch-utilization system (Sus) for glycan uptake. SusD has 551 amino acids, and is almost entirely alpha-helical, with 22 alpha-helices, eight of which form 4 tetra-trico peptide repeats (TPRs: helix-turn-helix motifs involved in protein-protein interactions). The four TPRs pack together to create a right-handed super-helix. This is predicted to mediate the formation of SusD and SusC porin complex at the cell surface. The interaction between SusC and TPR1/TPR2 region of SusD is predicted to be of functional importance since it allows SusD to be in position for oligosaccharide capture from other Sus lipoproteins and delivery of these glycans to the SusC porin. The non-TPR containing portion of SusD is where starch binding occurs. The binding site is a shallow surface cavity located on top of TPR1. SusD homologs such as SusD-like proteins have a critical role in carbohydrate acquisition. Both SusD and its homologs, contain about 15-20 residues at the N-terminus that might be a flexible linker region, anchoring the protein to the membrane and the glycan-binding domain. Other homologs to SusD have been examined in Porphyromonas gingivalis such as RagB, an immunodominant outer-membrane surface receptor antigen. Structural characterization of RagB shows substantial similarity with Bacteroides thetaiotaomicron SusD (i.e alpha-helices and TPR regions). Based on this structural similarity, functional studies suggest that, RagB binding of glycans occurs at pockets on the molecular surface that are distinct from those of SusD.	1.79719e-57
CP023864.1\|AUI56228.1\|1072193_1075940_-\|endo-beta-N-acetylglucosaminidase	gnl\|CDD\|227068	COG4724, COG4724, Endo-beta-N-acetylglucosaminidase D [Carbohydrate transport and metabolism].	1.79713e-36
CP023864.1\|AUI56213.1\|1037397_1038927_+\|carbohydrate-binding-protein	gnl\|CDD\|226195	COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate transport and metabolism].	9.32146e-31
CP023864.1\|AUI56227.1\|1068213_1071993_-\|glycosyl-hydrolase-family-85	gnl\|CDD\|227068	COG4724, COG4724, Endo-beta-N-acetylglucosaminidase D [Carbohydrate transport and metabolism].	9.27307e-49
CP023864.1\|AUI56222.1\|1061536_1064041_-\|hypothetical-protein	gnl\|CDD\|370572	pfam09586, YfhO, Bacterial membrane protein YfhO. This protein is a conserved membrane protein. The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system. Some members of this family have been annotated as glycosyl transferases of the PMT family.	4.56783e-09
CP023864.1\|AUI56711.1\|1043849_1046978_+\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
CP023864.1\|AUI56229.1\|1076367_1079397_-\|endo-beta-N-acetylglucosaminidase	gnl\|CDD\|227068	COG4724, COG4724, Endo-beta-N-acetylglucosaminidase D [Carbohydrate transport and metabolism].	1.31856e-33

>CP023864.1|AUI56220.1|1058131_1059004_-|RNA-polymerase-subunit-sigma
MRQLKISKSITNRSSEALDKYLVEIGREPMITVDEEIELAQEIHKGGRKGERAKEKLIKANLRFVVSVAKQYQHQGLSLTDLIDEGNIGLVKAAEKFDETRGFKFISYAVWWIRQSILQAIAEQSRIVRLPLNQVGAISKINQVTNEFVQQHNRRPSIHELAELTGIDEARIRQSQSADNHHMSIDAPFSDDDDNSMSDMLSSGDDSRTDRSVDFESMSDDLRAVLQNTLKDREIKIVTECFGIGCQEKGLEEIGTEMGLTRERVRQIREKAIEKIRESGNARVLMKYLG
>CP023864.1|AUI56219.1|1055567_1057955_-|TonB-dependent-receptor
MRRKDIQKYILLLLFIVAAQIVGAQSFTLQGKVSDKDGNPIELASVMVVTQGKLSMTNLKGEFNMQLQSEDSVKVRFSMIGYRTKTRVLVRPKGKQTLLVQLADDNELQEVVVQGKTKQHGTTEELDVQKTKQGPSTSGNAVEELVQTQAGVSTHSELSSQYNVRGGTFDENSVYINNIEVFRPFLVRSGQQEGLSIISPDMVESIGFSSGGFEAKYGDKMSSALDITYKRPKRTEATVSASLLGASAYLGLATKKLTWTNGVRYKTNRYLLGSLQTKGEYRPSFLDYQTYLSWKPNKRWQVDFIGNISENRYDFEPEDRETNFGTLQNVKKFRVYFDGKERDLFRTFFGSLAITRHLSAHTDLSLLASAFTTKEQERYDIQGQYWLTQTETSENLGVGTYMQHSRDYLNANVRSLKLMMQHRMGKHRLEGAVTYKLERIKENSAEYEYRDSAGYNVPHTGRDLKMIYSLRARNELNAKRFESYLQDTWNFQTRDSVPTLFTLNYGVRFAHWDFNGESLFSPRASLTITPGRNRNLSFRLAGGIYYQAPFYKELRDTSIVNGVTYATLNQKIRAQQSIHALAGMTYRFEMMGRPFKFTAEAYYKALSHLVPYSVDNVKVTYYGENTASGHATGLDLKLFGEFVPGADSWLTLSVMNTSMKLNGKRIPLPTDQRYALNLYFTDFFPGTTRWRMSLKLAYADGLPFSAPHKELENNTFRAPAYKRADIGMSYRLLDNHDGRSNTVFKNIWLGIDCLNLFGINNVNSYYWVTDIAGQQYAVPNYLTGRQINGRVTVEF
>CP023864.1|AUI56218.1|1052638_1054186_+|sulfatase
MQTKVLYGLTGALAMGAVVPAQAQKKPMNIVFIMSDDHSYQTISAYDKRFISTPNIDWLADNGVKFQESFVANSLSGPSRACMLTGKHSHANGFTDNTKTFDGSQQTFPKLLQKQGYQTAMIGKWHLTSLPTGFNYWDILIGQGDYYNPDFLSNGKRIRRSGYVTNIIADMAIDWMEHKRDKTKPFCLLMHNKAPHRVWNPDTCDLRLYDDVTYPLPKTFYDDYAGRLAAQKQKMSIIKDMDLVYDNKMADKENEIHTTTGLEPWGRANYNRMSPSQRAQWDSYYDPIIKKFKEDKLSGKALAEWKYQRYMHDYMRVIHSVDRNVGRVIEYLREHNLLDNTMIVYTSDQGFYMGEHGWFDKRFMYEESFRTPLLIYFPGGKHGVINEMVQNIDYAPTFLDVAGAKIPSDIQGRSFLPLLEGKKPSDWRKSLYYHYYEYPAEHSVCRHYGIRTKRYTLIHFYNDIDSWELYDLKKDPEQMHNIYGKPGTEKLTKNLKKQLLQLQVQYNDPIRNKGL
>CP023864.1|AUI56217.1|1052064_1052256_-|hypothetical-protein
MERGVVCEVTPTGLLIIGEGLGVRLQMPFGRPMTQSVTAEESDEEVCEKSLQGSELIIRKIGV
>CP023864.1|AUI56216.1|1051189_1051654_+|hypothetical-protein
MGPVVVDSWLDRGYKIIGKYKLLNPQPLPLTKSDWLFIHKQLPIWVRKHYPNYRHMPTISQLSIDSLKSNTSYQFTLLHDGKLLEEDVYLLSLPSSNVNHPLKIYIPKASVADEKQLTKDGRLVSKPVLVYPFLTEAWERNINETKPYGIGDMW
>CP023864.1|AUI56712.1|1049859_1050798_+|IS30-family-transposase
MYHQLISEQRSQIFALLQKKTARKEIADIVGISQSTLSREIKRNSTPSGKYIWTKAHDMAMQRRKSTVTNAKLSDELVWRIKEYITNDQWSPRQISGYLRMNEGIEVSHQSIYNIIHNDTTGKLAEHTRHKMKYRHRPKGGHLPIKDRVSIHERSKEVDGKRFGDFEMDLIVDPAQHAILTIVEKSTNMLLMQKLPFGKMSKPLAKVVRKLLLPYKNSLKTITTDNGPEFAAHKDITKYLGVPVYFADPYCSWQKGTVENTNKLIRQYIPKKDSFDNYTDKRIMSIQKKLNERPREKLNFSTPKCEFFKHVL
>CP023864.1|AUI56215.1|1047000_1048614_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKTVRTYILAGVAAFALTSCNDYLTTVPKDAMSPSTTWKTSDDAEKFLVGCYDGWEDGGALLYWDAGSDFAYNNFPWEGFTNIGNGSLSPSSPGWSFYDYTIIGRCNTFLENVDKCAFSSEAAKKDLIAQVKAIRAYNYFRMGFLYGGVPIVKPFTSAQEARVPRNTEQEVKDLVFKDLDEAIADINTSPAARGRIAKGAALAMKMRAALYWGDYQKAKDAAQAIIDLGLYELDPDYTNLFKLAGKDSKEIILAVQYKSGTRPLSTIGQLYNNGDGGWSSVVPTQKCVDNYEMSNGMTIDEAGSGYDATHPFHGRDPRMAMTILYPGCDWDGTVFNTLDENVNGKKNPNYPTNAANSSKTALTWRKYLDPKTQYADVWDTEASPIVFRYAEVLLTWAEAENELNGPSANVYAMLDKVRTRVGMPAVDQSKYNTKDKLRELIRRERGSEFAGEGLRRADILRWTSNGKMVAETVLNGPLTRVTGTIDNTATDPTMRAVVSGTSKVEDRSFQTYNRYLPIPQWNISDNPKLEQNPGYAK
>CP023864.1|AUI56711.1|1043849_1046978_+|TonB-dependent-receptor
MSNFMKVSKNRRKHPPFVTGSVAFSFALGLMAVAPSPVLANVDANTSMSVQQQKQSINGVVKDVNGEPVIGASVLANGTPVGVTDVDGRFSISVAPGTELKISYVGFATQSLTVRSGVTSYNITLKDENSALSEVVVVGYGTQKKANLSGSVAQLDGKTLENRPISNVSSGLQGLLPGITVTGADGAPGLDNGSILVRGVGTLNSASPYILIDGVEAGTLNSLDPEDIASISVLKDASSAAIYGSKASNGVILVTTKRGQNGAPKVSYSGYFGIQNATALMDRMNSADAAYYYNKALERSGKAPRFSEEAIQKFRDGSDPYNYPNTDWYGLAFKTAWQNRHSVNITGGNEFVKYLASAGYLKQSSILPNAGREQFNGRANIDMVLSKRITAHLNLAYIQNNYRDASSAYAGGSSDQIIRQLNIIAPWIVYKYEDGTYGTVSDGNPMAWLESGMTVNRNNRNFTGMIGLDYQILKDLKLTLQGAYVDASQRYSYFQKFIQYNPNKASDPNKLEIAHYDWHRTTFDAFLNYDKSFAKHNIKAMLGWHTERYKYLPDWMYRKSFPNNDLTDMNAGDASTQQNAGNTRELAMVSYFGRLNYDYAGRYLFEANFRSDASSRFADGHRWGFFPSFSAAWRVSEEPFMEGSKSWLNNLKLRASWGQLGNQDALNDYYPWMNTYNLNAKYPFGGQLTPGYYQGSYHLETISWERSTTWGVGLDFTLFGGLTGSLDYYNRKTTGIIMDVSAPAEFALGAYKDNIGALRNQGVELSLAYAKQLNKDWTINVGANFSYNKNKILYLGEGTEYVVDKDNRNRRTAIGQQYKSYYMYKATGKFFNSQQEADDYTAKYGNPFGRKFMAGDLIYEDANGDGKLDSNDRIYTKHTDIPAITYGFNLGATWKNIDLSMIWQGVGAVSHIYNREVLGEFSGDASHPSTLWKDSWTDDNHNAKLPRVFETGNSPSDMTRAMSTFWLWNTAYLRLKTLQIGYTLPKSTLKAIGLEKVRIYYAGENLLTFDALPFNIDPEVTSERGSSYPLLRSHSIGINITF
>CP023864.1|AUI56214.1|1038936_1041255_+|hypothetical-protein
MRNSMKKNILAACGLLFCSSLLHAQTTDEVRIDFENQDYQAIGVYDTWLKSPFRSHDGQPATLQGNVQVVSNIDKNYDDVLKSTPNASDKVLGFQRSRYGSNTFGARIDLKQPFALTKETKYVHVMIHKPKAGRTMLIGLGKRTDRPGQSADTEQFWEFSTKEIEPNKWVDAVFPVKGAGGIDIHSLVVVVDCEDSNGLKDDFLAYIDNIVVNNEAFTTTNREDYPMNYNKDQKCTRTDRGLKGISLGNQSIAVYGDISSSTPAYTYLSKRAFWAKPGETLTPAVQYKGIWMHSYVYVDLNNNGRFEPKVEAGQIVPDAGNELMAYSFLSASDENSGFNSAGTEISGNGRNTLSMPAFTLPDTLQHGFYRMRYKVDWNSSDAGGSIETNNHIINNGGGAMDIRLNVHGDNVTITQGALNGKVVAADDTELNNLSIPFGQPFTIKMKPEHGFNFNGLRVRHGYNLTGDSLSHGTYQYVDELVPRERFNEDGTFTLPAEMIDGDVSLEGIFIDAKTTLTYEVYFNNKFVYSTAVNGAKTGAVTIPESLNRDFVELSSDTQTVTSLPATVRINAMWTGPMKVATATDTTWYNLKVSSQPKWVSSRTYAPNVYFIDQSDTDKDAALWALTGDPYSGFHLINKAVGPTHVLASASPKGSGNAGGFTFATLESASELPIGYTSGWFLNVSPNDEAGFYICNPEGYGLNYRANNNLAYWTGGKDGGSTFVPTEVKKTSTGISSLTLQQDATTTYDLTGRSVGKNHRGIVIRNGKKLLIK
>CP023864.1|AUI56213.1|1037397_1038927_+|carbohydrate-binding-protein
MNNRFLHGVLTALALTATATSFAQNPTVMTLQTQVAPNPENEPRPVFPVPSDRQWQWQQTEFYAFFHYGMNTYVNEEWGKGNESPNSFAPTEKPDPRQWLEAVQAAGMKGGIAVVKHHDGFCLWPTASTDYNISHSSSPNAQGVNIAELFAKAAQELHMKYGFYVSPWDRNNGQYGTDSYVKDVFLKQCAELAKYGSDQFEMWFDGANGGDGYYGGKNTTIHIDRSTYYDVPNLRDSIHKLSPNIILWGVGGEARWIGNEDGWAGETNWCNENRGVAPERNGMYGTENGWFWLPGESDAKFTNPGWFWSQKSKPMTAERTFQMYLETVGRNSTLILNCPPDRSGKLPQDQVSRLKEFGKMLKSRFQTNLAKSATIEASSTRAHGATRSYAANNLIDENPDTYWAAEDDVKDVTLTLKWNNPQTVRYVTLQEYVRLGQRVKSFSVEYTTDGSTWKPLANKVKQTTIGYKRIIPLNGSTANSYGSGYEARAIRIHIKDAKACPVMSEIAIY
>CP023864.1|AUI56221.1|1060561_1061080_-|hypothetical-protein
MIMDTYMFLIPVVAIIIICLMVLYARYVGRKSRGRYAAAAMRFIEKDYPEIDIRDKRYLSTRVDYNIISRHVPVLVVYNSHELHLVPIHALAIPPFYNIRHNDHHAKDMVHLLMDDVKAIVLDRRGRLHIQREEGNDIVLKVGENNVFHENQHEEAVHFLATLKKAADKVVL
>CP023864.1|AUI56222.1|1061536_1064041_-|hypothetical-protein
MKTWKRYLPDVVVVVVFALISFAYFFVPVTQGKILYRHDASAGVGSAQELTEYQNRTGETTRWTNSIFGGMPTYQMSPSYQSTDGLSQVMNAYHLWLPENVWFLFAYLLGFYILLRAFDFRQSLAALGSVMWAFSSYFLIIIAAGHLWKVMALAYLPPMIAGIVLAYRGRYLSGFIVTAIFTAFEVKANHVQMTYYYLFIILFMVIAYLVQAVRQKQLMGFLKATGVLAVAALIGVLINLSSLYHTWQYQKESMRGKSELLKADGANQTSSGLDRDYITQWSYGIDETMTLLVPDAKGGASVPLSKSETAMAKADPQVQSMIPQLYDAFPQYFGTQPGTSGPVYVGAFVLFLFILGLFLVKGATKWALVAATVLSILLSWGHNFMGFTNFFLDYIPMYAKFRTVASILVIAEFTIPLLAALTLKRLVDEPDLLGKKMKYAYISLALTAGVAFLVALFPDMMGPFVSDQERQMLGSVQGMDANTAGTILSNISTMRAAMVSADAWRSVVIILIGFALLFVYKMKKLRADYMVAALLVLCLVDMWQVDKRYLNDEMFVPKSERDMPQQPTAADTEIDKDKSLDYRVLNFASNTFNENETSYFHKSIGGYHPAKLRRYQEMIDAYIAPEMQKTMQAIAATGGNMRAVDGVKTFPVLNMLNTKYFILPLQGGQTAPLLNPYAQGNGWFVDKLTFVDDANAEYAAVGKIDVRHEAVADKKFEAALGQAKANDSTAFVKLDKYEPNNLQYTVSSRNGGVVVFSEVYYPGWKATIDGQPAEIGRVNYILRAVSVKPGKHTVVLDFHPTSISTTETIAYIAIVILLLAIAGAGYVEWKKRGK
>CP023864.1|AUI56223.1|1064147_1064864_+|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase
MKIGIIVAMDKEFEQLKAILAHSQTEHFNHKDFVSGQLGEKTVILQQCGIGKVNAAIGAVEMINRFHPDLIISSGCAGGADTSLEVTDVVVAKECAYHDAYCGDEVAYGQIIGMPSRFKAPVKLIERALSLNSQTDGEGLHIKAGLTVSGEWFVNSREKMREIMAHFPEATAVDMESCAIAQVCHIYQTPFVSFRVISDVPLKDHKASQYYDFWERIANGSFEVTRRFVEGIEAGDGC
>CP023864.1|AUI56224.1|1065120_1065609_+|S-ribosylhomocysteine-lyase
MNKIPSFTIDHERLLRGIYVSRKDEVGNETVTTFDIRMKEPNREPVLHVGAIHAIEHLAATFLRNDPEWKDRVIYWGPMGCLTGNYLILRGDLASKDVVDLMRRTFQFVADFEGDIPGAAPRDCGNYLLHDLPMAKWESRKFLTEVLNNITDANLNYPEKEE
>CP023864.1|AUI56225.1|1065634_1065844_+|hypothetical-protein
MTVSVDKLTSRQVDELMVSVGELTESVDKFTGSVDKLTSGQVDELMVSVDDLTESVDKLTSGQVDELTG
>CP023864.1|AUI56226.1|1067412_1067928_-|hypothetical-protein
MEIITQSNYKTSTWEGGVTRQVFISPSDGDLSARCFDVRISSAIIDSVESEFSDFSGFTRYILPLEGEITLIKDNQRIALSHNALYEFEGHERVCSENTPGAVDFNVIVRHGVTVDARILSDESFVDSRRTILFALEDCCVNAIPIHRHDTVLLDGPFSLEGKAVVVRVGG
>CP023864.1|AUI56227.1|1068213_1071993_-|glycosyl-hydrolase-family-85
MKRITLFASLALASCLTVSAQRTPTHPLDIQDAKFENLPNYLEAWLKGEMKQPQGVSEIDDQFFISRVRPLERIKDGDYQVRQGVKRDRKMCLWTPLDDPTAQWKALPRYCFEGDNFSLWSYIDIHGNWTSPWIRSTAGLTDVAHKNGVTVGCVMSIPYGNTVYPSRWSYDNYGRILYQLTQKKNGKFVYAEPLVRMMKFYGINGIGFNSEFHTSASSMTLLSDFFVACHKEAEKINWKFEVHWYDGTGDDGHIHFDGGLGYHNQKIFGDKDNIATDMLFANYNWGPNHLSGSVSTAKRLGRSSFDYYAGFDIQGRGLRQPSWSALLDNDISIGFWGAHKQSLIHQSATDNGTSDIAIQKTYLKKQELMFSGGYNNPGLLPDINTDCNLANASLKSFHGLATFLTAKSTIQQVPFVSRFNLGNGLSFRKDGKVTFNHKWYNLNTQDYMPTWRWWITDGADQVNTGNINSLAKAELTFDDAYWGGSCLSISGQTAFSRVKLFKTMLEVKPDYEFSVTYKTIADKDTHAKFFVALKDHVTEYKEVALPAVETVGEWKTFSVKASDLGLAAGDKVAMMGLVVENTPANYELRVGEMALRDNAKDFATATPTIKKVEILRGRYNACDFKMQYASKEESGWEKTYNDEVGTWYYEIYFQQKDQPVQLLTATTSWAAYVVDAPMVSGADKRDCRFGVRAVSPDGKKGSDIVWSEYKEVAYDQPLSDVVADRPVIKPNEEFTLKYLDDMVPAAQSWKLKNAVTGAVVAQGESGTSAKFAVPTEGTYDLVVMDSNGKESIIRGKVKVTPEATGAVPQITDITADKTTEKVGKNVTYTYEGRLGEGKASRGLEITDPKMFRIPGDVQQGKSYSYALWFKADKFSHDSQGTNLINKNSIHDKWPHNNWGDLWVTIRPEWQGHRTKHEANEISFNTMGWTAHDNPYEDVMSTGYNVTPGVWNHIVVTQDEGNMQKIYFNGRKVADHSFTESKRREDVVRTDGRIDISQVADIFIGGGGVYKSGFNGVIDEVQVWNRPLTDDEVLQAMKGYKEGEVPADLKAYFTFEEVDGLKFKNLGTAGRNYDGSVVVVAGSGGENTSGASYVDQKPNNDVLGFPGVVGTYEIKTVPTWTLGDGVISSSTDKTAVVTYAAPGKKNVTLKLKNGWGEAEKTVEEIVEITSEANAIDAVDAQLGFSVYPNPFVESVNMRFAENGRYTINVLGTTGALLQSNSFEAAQGQVVNVAITGTKGMYLVQVLKNGKVYKTVKVVKK
>CP023864.1|AUI56228.1|1072193_1075940_-|endo-beta-N-acetylglucosaminidase
MRRINLLLFGCCLIPSTLMAQELKSNYIQWGFDSHQFPGKLQSWSKSNPKINDDDNFFISRVKPKQRFRYTDTQVRTDLTETNDKKLLAWLPWNVPSKNALPDGVFDSEVFSMWPYVTHWGDWNCGLGRIPAALLDAAHKNGVPVSSVAGIPWGGLKGDWRTTLNNLSTANVQNAADFMNYFGYDGLGYNSEFSDYFGSGRLVRALKDFHVNLNKAIKPYNPIYENLWYDGTNERGNIDFDKGLNDNNKNLFGAKGSEAANLFFNYNWNSDWLLQGSVDKAAEIDRSPLDLYAGINMQGGEPRYGSRWTLLKNYPISIGLWGAHSQNMFFESRGEKGSDPETQQRTYMLRTERWFSSGSRNPVNSLQINNSLNYNADNTDFAGMSAMMTARSSMSWDLTQEPLITYFNLGNGKFFNYGGVRKNDRPWANVGVQDYLPTWRWWFASKLLGRTAADVPATGLDAEFVWDDAYMGGSTVRVHGSTSKEYLHLFKTKYALKTGDVITFRYKVKGGKADASLVFATEDNVNAEKAYPVLASTDEADEDKWVEKTITVDGTLNGKTLALVALKMENAADLNLYLGEFSIVRGSFDAPAQPIDVKTTLLHAAKNGVDAKIIFNMPNTKGQGEPCYNTDVKTSLFKLWAKQEGKDPILMGVTTSWAGMFYSVPVDLKGQGKVKFGVSAVSLDMKKESAIAWGEDHEIFNSYEYSDEIKADKSVIKPNEAFTIAYVDPRHEAGNWKIEHNGATVATSNNANEIKVENGLSQTGFYDLVLTGAVNENGARVNKEVRYANYIQITSDAVGAVPHINKLTANNSETSIEVLANSEVTMQYEGKKADGSGSRGIKTLEKPVGVKVSELGFNSTSKNNMAWSLAFWVKFNGFTGGTQIVDMRDPGTGWPQNNWGTMWTTYDPNTGVYEVTLREKNAGGAKEYKQRWEVDFVPGAWTHFVLAMEGNGTTTKPMVYINGKAAKAHDWEYDGHKGNGINPDGFANNAWWDNNVLGISLGRAGAAAINGTVDDVKFFNKALTAAEAAHTMMSTDANEAGLKAYWDFEADADASHYFASKVGTAKLAHGELKAGEGEGVTTLVPDVPTYDAGSAFVSGTFQVKTTAEWTAKKATIVSQDGTDMAGTAKLKYAKAGDYEVTLTLKNAHGSDTRTFQVIKVKADPTGINGTETADMKVYAIDRDVLFDVETPGNYLVQVFSTNGQMVASKAVSVNGAESVRLHLGAQGVYVVNVKKDGKTLRTVKFICK
>CP023864.1|AUI56229.1|1076367_1079397_-|endo-beta-N-acetylglucosaminidase
MNKKSTLSAWIIAAMMAMAPVGVTAQTYSSTASTQVFDLSKLGDQTLLEHFAELLDNGKKYPTDADLTAWGIKDEVEFIRSHVRKRAIESRADRLLQDTYENRNLFMNIPGGAGKNLGGYPSKTFANDNFSMWNYTNLFGAWNYGLFQAPGSWADAAHRNGTSIFAGIKFFDHTTGGAANSWASFIMTRNSDGSFRYTHPIINCMRFLGFDGINYNWESTNKYRETNNIAFHKELYRIAKEEGFNDFKIMYYTTNQSLTPYNSSYMWGQKPDERISEVMLNYASSDFSWNIGESVREAERTMGSADGLYAGVWIVSMNRRWNSLNNTDANRCGICLWGEHAESRFWSYNTGGDAMSRMSNYQEYLERAFSGGNRNPLSRPEIKNYGNEVEAQGGNPPLASFAGLASWIPERTAISGNLPFATHFNTGNGERYNYKGKKTAGSWYNMSSQDVVPTYRWMVVKPETEVASTDVQPSFTNEDAYTGGAALRLKGVNNATATDVVLFKTNLTPSKGKVVAKVAIKTGKEGNNDSKLSLIVRVNGAWKAYALGNTENANWTEKKVELNDITAGQKIERIGLRVKDSDADYNVLVGKLELNDDVTATPANVKDLTVQVKEETKNSLSVKAVWGIDKDPGQNPTVYNDEANIDHFEILYKNGENGKVSEVGRTSQWATLVPNIQFTSVDDKPFIGVRSVSTDLKTYSKTQWIAVPRAQQSQLPEAQEEGYGTVELDNAAAGADVAKRIRYVKKFQTEGGSKNIDYTAEGPAGNETNYVDATSQELEVAQGATVKVKIQGYEATQIKDQSNDDLRYCMGKAWMDFNGDKQFNPENLSENPNEGECVVFFGQVRKGVPAQVQQLNEYTFKVPEDAKPGQSRLRLVFCDAWFQGGLTPTGKFNKGFAIDFKVTITGSNAARGAKADTHDKGVADEPELLEGGSTNIISANVGGASQLTVVGGKVVFENVERAWVFSTDGQTVKSLVNPKSFNTNELPAGVYLVKMQNNNVIRTQKITIK
>CP023864.1|AUI56230.1|1079496_1081329_-|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein
MKSKHIIVLMAMALPTLGLQSCLDYDNPGDEFNSTTKNVEKVTSRGDVDQIPFRQATDAAAADEALNAMQDLLDAGVGGQFSMRGGKNGENPGAHAYQYQYSLGVDNYAEYTVIPHTFFQYSKIRLASSYAIDQKCYGGAWGSFTEMKTSLVPILNNEKVNAVPELKAAYLTLFNQQAVEVADVYGPMPYRELKTNLQVGPYTYNKVEDVYNDAVANLDTAIACFHYFDQKPAAYKQKIKSAFIDRFVVMTDGGAADGTLKAWARYANSLKLRIAMHMVKSDPVRAQKLAEEAVADGVIENEAQSVSIRPGVMGFSHPLPGVENWGDARMSATMEITLKTFNHPWLKYLFKKNDNVIKNNKTGETTPADSRICGIRTGTHPGEGQGYDENQYIAFSKLNEQYFNSAPLYLMKYAEVCFLRAEGALRGWNMGGSAQHFYEEGIRHGNCEDPEMKSMDGESPNGQQNVNWYDSWIDTYMAQENPVAYVYKDPTGDTPDAASPIHVGVKWNDSDSQETKLEKIITQKYLATYPNGFEAWVDLRRTGFPRMLPVLNIDEADGSLVPGDIMRRLPFPGTSDIATKQDVDNTGIPALGGPDKMATRLFWDKTTSNF

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Crispr_ID: CP023864_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_11

1103309-1103409

Orphan

Consensus_repeat	Method
ACCATGGGTTCAGTGGATGATACAGGATGAGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_11

>merge|CP023864|11|1103309-1103409|CRISPRCasFinder
ACCATGGGTTTAGTGGATGATACAGAATGAACTTGTAGACGGTGCTGAGTGGGTTCGTGGACGAAACACCATGGGTTCAGTGGATGATACAGGATGAGCTT

>CP023864|11|8|1103309-1103409|CRISPRCasFinder
ACCATGGGTTTAGTGGATGATACAGAATGAACTT	GTAGACGGTGCTGAGTGGGTTCGTGGACGAAAC
ACCATGGGTTCAGTGGATGATACAGGATGAGCTT

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56239.1\|1099876_1100221_+\|transposase-family-protein	unknown	unknown	gnl\|CDD\|379669
CP023864.1\|AUI56243.1\|1110208_1111285_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
CP023864.1\|AUI56236.1\|1096186_1096378_+\|aminotransferase	unknown	unknown	unknown
CP023864.1\|AUI56716.1\|1113736_1114663_+\|glycosyl-transferase-family-2	unknown	unknown	gnl\|CDD\|366154
CP023864.1\|AUI56247.1\|1117888_1118566_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56713.1\|1090504_1090711_-\|aminotransferase	unknown	unknown	unknown
CP023864.1\|AUI56714.1\|1104796_1105027_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56232.1\|1085726_1087169_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225420
CP023864.1\|AUI56234.1\|1091189_1091417_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56233.1\|1088641_1090480_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56246.1\|1116023_1116278_-\|DUF5053-domain-containing-protein	unknown	unknown	gnl\|CDD\|374564
CP023864.1\|AUI56241.1\|1106155_1106350_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56242.1\|1106410_1108165_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56245.1\|1114805_1115900_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340831
CP023864.1\|AUI56235.1\|1092931_1094908_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56238.1\|1098807_1098993_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56240.1\|1100336_1101206_+\|DDE-transposase	unknown	unknown	gnl\|CDD\|376574
CP023864.1\|AUI56244.1\|1112834_1113728_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
CP023864.1\|AUI56237.1\|1096496_1098419_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56715.1\|1111271_1112777_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240530

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56239.1\|1099876_1100221_+\|transposase-family-protein	gnl\|CDD\|379669	pfam14690, zf-ISL3, zinc-finger of transposase IS204/IS1001/IS1096/IS1165.	0.000993701
CP023864.1\|AUI56243.1\|1110208_1111285_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.62618e-37
CP023864.1\|AUI56246.1\|1116023_1116278_-\|DUF5053-domain-containing-protein	gnl\|CDD\|374564	pfam16476, DUF5053, Domain of unknown function (DUF5053). This family consists of C-terminal of uncharacterized proteins around 100 residues in length and is mainly found in various Prevotella species. The function of this family is unknown.	1.18474e-29
CP023864.1\|AUI56245.1\|1114805_1115900_+\|glycosyltransferase	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	3.69089e-14
CP023864.1\|AUI56232.1\|1085726_1087169_-\|transcriptional-regulator	gnl\|CDD\|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	3.22746e-55
CP023864.1\|AUI56716.1\|1113736_1114663_+\|glycosyl-transferase-family-2	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.98772e-13
CP023864.1\|AUI56240.1\|1100336_1101206_+\|DDE-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	4.21013e-53
CP023864.1\|AUI56715.1\|1111271_1112777_-\|hypothetical-protein	gnl\|CDD\|240530	cd13125, MATE_like_10, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. This family might function as a translocase for lipopolysaccharides, such as O-antigen. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	2.35342e-51
CP023864.1\|AUI56244.1\|1112834_1113728_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	4.45377e-36

>CP023864.1|AUI56240.1|1100336_1101206_+|DDE-transposase
MEHAQDWLLFEDNIGESLSIDETCLSSGEVYTFLTNKAGKGRKGTLVAVVKGTKAEDVIQVLKKINISKRNTVKEITLDLSSSMMRIARSVFPKALITNDRFHVQKLYYDALDDMRIAYRWMARDKENQEIREAKSEGKEYIPFRYSNGDTRKQLLARAKFILTKHKTKWTETQKGRAQIIFEHYPTLKKAYDLAMKLTDIYNIKSIKDAARLKLAKWFNEVEELGVDNFYTVIDTFENHYQTILNFFVNRATNANAESFNAKVKAFRAQFRGVTDIPFFLYRLMKLCA
>CP023864.1|AUI56239.1|1099876_1100221_+|transposase-family-protein
MKNHQLLRCIFPDVLADYFDVVDIQESVSQIDFWLDERNFMEKSDHKLGTVSSYGFTSERVIQDFPLRGKAVYLHVRRRKWRDSSNGEIFTYSYDDLTAEGSKLSPEFVSFLKE
>CP023864.1|AUI56238.1|1098807_1098993_+|hypothetical-protein
MRKKNYTSPFCEVYPLNEEGALLGNTNNNNSTTSSNDSTQPPTLRVDNESGKEIENEDDIL
>CP023864.1|AUI56237.1|1096496_1098419_+|hypothetical-protein
MRKSSKIAIALFGTVAIALSACQTDELSETAGTDNTPKVYHVTASAEPAQGSGTATRALAVDPANGKRLISEWAENDELAAFVNGDEGKRNNYFVLTSTRGGKSASFKGDIAAAGRSMSTNDNISFLYPAVALKGANKTITPVERKLLDVTIGGSSSKLLSYIPSNKIQQYVYFNISQQDGTAATLGSRFDYQTKSAHPESVEGDKVNIKIGTLQRLVSFWGLRFTDENNNKLSNIDSVYVSNIKASGVLDLTNNSFVNDDAYEESRAIAVVPAKGTKFTSANNQYTYVALLPGNYTQIHIMVYANGKKYEQDYDNVTLAADKVYHTDILHMKPVYPKPWVEVQGVKWATGNFIHYGPANGGYWGIAPAQWWISQRAVTLDGNRNITNYNAGNTTSQFANFPTQKAEDVDLFRYGLIKEALDLKNSELFRYSVAGKKLYYPSSPGSYTDWDMNGTGATRGDIAWYYTKGKHQRYRMPSGDEMKKLYTEARAIPAYCYTDKGTKVYGAYFTTSTSGGHRRFPAKRFVRSIDNYTNVTALVQANKGLFLPYTGLRDPGAVGMKMRDLSGDGNAYGQYMTTDDSKWNDRSADFFFGAAEWNWAEHPKTQAKAIRPVWDSGDGTSDNPTLDEDYLNLRKSIGLK
>CP023864.1|AUI56236.1|1096186_1096378_+|aminotransferase
MKKTYLEPETKLYAMRVEGFLAGDSNITAGTTDPQPGGDPTHQNRNGNNPFQSSAKKAIEWDI
>CP023864.1|AUI56235.1|1092931_1094908_+|hypothetical-protein
MAILASLLCLSCSETNVDYDSNTGTTSSTGAVKTYDVDIEASTDNPENQAQTRANMPFKVSEENISGKTVLYPKLNITQQTMPSVVVLYNKDGGKKEVVEANWSVTKEGSNVKLHLNKLSTTSNLASGDWYIMAFMGGGEKKGDDLEVNTETTINVIEKGKEFATSCPFATTWRRIVKQGNKLKLYNESKKMVFKPQGVFLVLSLENRVGLDTKINRELTLESNAFCSSGSYKFNVGNNVSDDADLASSYWEPNSAKAIARSSAEYKKYNAEHYTTNIKLNYESAKDDGSLRQGQSDLGSYIYFNSYKGASQAASNTKTNRGFLLCLMPVDYKKTSNYSAIVNETLLFGKVDVTDPTRTNYTYDKLVYKTNPNTWKPFMGNRYLLASFSDGLAKGSSYGVTLRILRPTLPIERLWAYRQGNELQLKTRNDAEALAEGRKIDNTNYPSLNSKLYRLPKYTELTPVFNNPKLEFDKDLPIGGQKAFFIGNEYGVSNTKDSHRDFVDLNGVQRKFSNWYCTERGSKVMYAIMYMKPVNGGDPNPTNNYKVAVRMTFPSSQATSGIATIETYYLGSNYNLSFAVAGYYICHKDFWAKLNPQDIIVRTFRLDNYWLNNKDIINWTYEPKATYTKFSLSGVAQDLYTATNGRSYFIPWLRKPAW
>CP023864.1|AUI56234.1|1091189_1091417_+|hypothetical-protein
MASLPMTAKQDWLGKPLKIIQKTPTDKKEYRLHILKSCNYSIVLFIFFRTFADGFAIFSMLRNQGVTLKRMGQKG
>CP023864.1|AUI56713.1|1090504_1090711_-|aminotransferase
MAYLQPVCTFVNVQAESHILTISGSTTDPVEGGDPTGGNGNGSAPNPFTSGTAHSKTQQNFLDAPEDY
>CP023864.1|AUI56233.1|1088641_1090480_-|hypothetical-protein
MKIMKKNVLFPVACFLMAAPLLTSCHDDVDSSTAENTTIHTYSLVADGANALQQEPATRVLSEDADHKIKSEWGRQDDILAYVVGGDNLHTANYSYITNSNLGGKSNFDGEIASSAALTTNSEIAFLYPGKAAQGNNRTITPVTETEERSSLYHEASNKTQDRVELKLTEQDGTAETIGERFDFQWTKQKPKKVEGKKVDISLGELKRIVTIWGLRFTDENNRPLENIDSIYISNVKGSDILDLDSGKYINNNEEDEVMNIVLRPKTGTKFSSKDGKYTYVAFIPGAYTDVVVTAYVGGKVLQRSYDSLNFETGKVYRSDILKMEDTQQKAFVEVQGIQWATGNFIHYEENGQQYWGIAPAQWWISRRAVMLGSNRKEVSSGGILQSSQFESGPEQTTDDVDLFRFGSIANALTFRGIAGLDVWGENEISQKISSDGKHGDIAWYYTRNNKRKYRMPTETELKSLYTVANVIPAYCYTDKGTIVYGAFFTNNSTNDADKRKKAFPTKAKRYDKYTNVTALVRANKGLFLPITGRRSDGAAKIGYRDMVYSLGAYGQYMSSTAAALNWDFFFGPTEWNFSKNSKGQAKAIRPVFIEESSTGSDNTFAPFANIK
>CP023864.1|AUI56232.1|1085726_1087169_-|transcriptional-regulator
MVIKEEVLELLQSTETYRIERTSSTGDMDKFQEAICAFSNDLPNSRKKGYLILGAYDNGTLSGLRVDDALMKRIAGIRSDGNILPLPIMSVERVELEGGDLLVVEVSPALVPPVRYRGRTFIRIGPRRDIATESEERVLLEKRTSYMATFDATPCFGSSLKDIDTQFIKYEYLPQVIDADILKTDKRSLQEQLAAIHLYDIVHDCPTNAAIVLFGINASFFLHGCYVQYVHFAGEDTGSEILNERQMRGSLCSILPKLESFVKDAIVTSRPMPVSMLREQIVFNYPELALRELLMNACMHRDYQSNMPIRIYQFSNRIEILNAGGLYGEARPENFPTVNDYRNPIIAEAMRGMKYVNMFNRGIQRVKNMLRENGNPDPIFNVGKVTAFEVTIQPSLSLNLVTDGEKVTKSVTKSAEVMNEIIALCQQPKSLTEIITHLGLKHRNNAKSRYIDPLIKGGFLEMTIPDKPNSRNQKYISVLS
>CP023864.1|AUI56714.1|1104796_1105027_-|hypothetical-protein
MNIVLDITRKQVTTSELLKHRPNLRTGFLSSLGLTSVRRFERYLQGNDREDLQRDAKVIARDMNVAIKYITNGRKK
>CP023864.1|AUI56241.1|1106155_1106350_+|hypothetical-protein
MIKLNELDLLYASSTARKDYVCPAAMLVHIEPEGCLAAGTTRMGGGHENAYDDDNEWEEEEDDN
>CP023864.1|AUI56242.1|1106410_1108165_+|hypothetical-protein
MKNIVSKLLVTGLVCACFASCSTESIEEVGGKKAEDYKGMTCFSDEGPATRTAGKYVAQSSTEPAHVAFLWTQGDKIWVNTTGGTTFEKNDKDDISEQVATSNFYFKKNLTAESYKVRYTGTVSDKADEVVFAAKQKQTAPNSADLIGQYGDCGIATATKNANQKYSFNLAHKAGYLVLTPYSSVHKFDSSVGVRAVYVTANEGLTGTYTMAADGKLTKKTEEGKQIVWYYQEDVAGHNNINEEDGKPFLPIPATSDASKNGIIIVLPPGEYTNLSIEYLLVDPLSGGKGYYKKSYKGTVKVEAGKPHYIAENIKLYEYDKNQYYTWDAATDEYFWKGHEDRQPILPGDVMEYREDGFPDPTGTTDARSYNHSQGHTTTVDGNKALKSAANAMNVNEALWLVEKGSPMWDKTKLYAITYRDNVCHLFNTGVWFKTLKKIAADEGKTLEALKTLAPNGKDYRIDPAAPEVNVEIASFGRPAKANTNADYMFLPCTGFYGFKHTEGASAQLETPYKIAAPLIGATAMYWTSSAAARSSEGAYALSIFSSAVIDEYTVSVINTTKYSGHPILFDNMGVNGPGKFRIK
>CP023864.1|AUI56243.1|1110208_1111285_-|glycosyltransferase-family-2-protein
MPKISILVAVYNSAAYLPQCLDSLLGQTLHDIEVLCVDDSSTDNSLAILRDYAERDRRVKVFALDENHGIAFARNVALSNASGEFICFVDSDDWLAPNALEAVCKTFTDDVDSVLFQVVLHYADGREKTYPMPPFEALSGERAFVDSLTWKIHGVYAIRAAIHHAYPYDDALRTYSDENITRIHYLKSRKVAVCEGVYYYRQHTSSTTHRVSVRRFDYLLANERMRCQLVAIGTSEVNLRCYETIRWQNLVGLYLFYYLHRHELSATDRQEALSIMRHVWQTIHLQQVSPSLRRKFGYIPFRPSQPSHRSSWSSLRCPTRLLHRPSWFPFRPLWLLFRLQEELYFTLRALVGRNKEAK
>CP023864.1|AUI56715.1|1111271_1112777_-|hypothetical-protein
MKKVSNTDSYLHILKYISLFGGVQVLNVLIGIVRNKCVAMLLGPQGVGLISLFNSSTRLIGDATNFGIPMSAVRNLAEDYDKGDEEKLTTDIAVVRSWSLLTALLGLFICIALSPLLSRYTFSWDGHTLHFVLLSPCVALTALAGGELAILKGVRKLGALAAISVYNVLAALVLTVPLYYLFGDTAIVPSLVLMALVQLLLTIVVSYRLYPPHVSLRKSLLDKGWGMIRLGTAFVLAGILGSGAELIIRSYLNNVADLSTVGFYNAGFMMTMVYAGMVFSAMETDYFPRLSGVNSLRFTFNQIVNRQIEVTLLLISPLLSFFLLFLPQLILFLYSDKFLPALGMAQVLVLAMYVRAIRLPVEYIPLAKGDSRSYLILEGLYDLLLVSLVLLGFWKGQLFGAGLGAAAAGVLNLGCVYGYAYARYDYRLSSSVVVYTLIQMTIGLLVFFCVRSEHDSLRWGAALTLCLTSTIVSLRVLRSKSGLWNTMINKVKNKFTRHAKD
>CP023864.1|AUI56244.1|1112834_1113728_+|glycosyltransferase-family-2-protein
MSLSIIIPIFNVEDTLRRCLRSVLAQIDNTMEVVLVDDGSTDASRQIAEEMTADRANCRLIYQTNRGLSAARNAGIDVATGDYITFVDSDDFVAEGSYAALMAVLAAHPDYDILEYPALLHYGCASKQRLLTFDDTTVDSVRDYWLRGGHLHTYACNKIFRRDLFSEIRFPVGKVFEDVYTYPYLLQRAKVVATTSVGLYYYCQNDRGITAQAGGKELTDLLNAHLKHLHLWGELTPAYYEALVNIQMDVYETTQAAPLLPVLPYKGTLKLFILHLIGLKRLCQLNQFIHKIRKISH
>CP023864.1|AUI56716.1|1113736_1114663_+|glycosyl-transferase-family-2
MVTYYSESIDILRDCVNSILALSLNETERQIIVVDDGADYSPINELLALSADIIYVRQPNQGLGQARNTGLALAEGSFVQFVDADDMLLTSTYEQCLDIIRYQETDMVLFESTDKTTVKPLADAQGPVSGTEYMTHNNINGSVCTLLFHKDILHDLRFPKGTLHEDEEFTPQLMLRAESIYTTHNKAYYYRKREGSIMHRRDRRWRIRRLADAEQVIYRLQEGVDHLPVKERIAMERRIAQLSMDLIYNVITLTHDETHLNHVLQRLSQHGLFPLPDKDYTSKYKWFRRMTNSSFGRRLLLMTLRLKR
>CP023864.1|AUI56245.1|1114805_1115900_+|glycosyltransferase
MRILLLGEYSNVHNTLAKGLRQLGHTVTVVSNGDFWKNYPRDIDVARPSGRLGGLRLLAKIYALLPRLRGYDVVQFINPMFFELKAERLSSIFRYLKKHNKKLILCGFGMDYYWVDTCSTTMPLRYSDFNIGSRLRQNEEAKAERKDWIGTEKERLNILMANECDAIVTGLYEYWRCYEPHFPKKTVFIPFPIVVGERPNIPDTPPDLLNLFIGISKSRSAYKGTDIMLRAAETVKEHYPDKLNLKLVTGLPFDEYVRTMLGSDAIMDQLYSYTPSMNPLEAMAHGIICIGGGEPENYAILNETVLHPIINVLPTYESCVEELTKLVNNLSLIPSLRRQSYEYVCKHHDFIKVAQAYIELYRGL
>CP023864.1|AUI56246.1|1116023_1116278_-|DUF5053-domain-containing-protein
METVMTKPVVVTDMKRKVQDILMAVSWRDFAGTYFQKSSSWFYHKMDGIDGNGGAGGFNEQEAEQLRNALMDLSARIRRAAENI
>CP023864.1|AUI56247.1|1117888_1118566_+|hypothetical-protein
MQRQQCEGQKGRAWSWELTIIMLIQLVSAGLYGLIFILMYDSIHLRWGLGYALLWTALLSPLALMIAARKSRWKLYIRIYGALMAFALWLMAVFCQLLGADIFLPATCYCKDGDYLVRRTYDFFDNKKIGVYKVEDLTERLQSTYSYASLDSIKVYESLNAIAFYCSPHIEKGPFGNNHIGPIRVLEQLTDDPLDSVQIKGVEQLARRRNLKIGISLVDYLEENE

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Crispr_ID: CP023864_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_12

1117350-1117439

Orphan

Consensus_repeat	Method
TTTATCTCTCACAGAGCACACGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_12

>merge|CP023864|12|1117350-1117439|CRISPRCasFinder
TTTATCTCTCACAGAGCACACGGAGGTCACGGAGATTTTAAGCGCACGTATTAATTCGTGGAAAGTTTTTTCTCTCACAGAGCACACGGA

>CP023864|12|9|1117350-1117439|CRISPRCasFinder
TTTATCTCTCACAGAGCACACGGA	GGTCACGGAGATTTTAAGCGCACGTATTAATTCGTGGAAAGT
TTTTTCTCTCACAGAGCACACGGA

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56248.1\|1118565_1120518_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56716.1\|1113736_1114663_+\|glycosyl-transferase-family-2	unknown	unknown	gnl\|CDD\|366154
CP023864.1\|AUI56254.1\|1128303_1130097_+\|peptidase	unknown	unknown	gnl\|CDD\|274507
CP023864.1\|AUI56250.1\|1121547_1122606_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56252.1\|1126720_1126948_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56243.1\|1110208_1111285_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
CP023864.1\|AUI56247.1\|1117888_1118566_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56714.1\|1104796_1105027_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56715.1\|1111271_1112777_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240530
CP023864.1\|AUI56255.1\|1130530_1130767_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56249.1\|1121112_1121304_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56253.1\|1126985_1127255_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56245.1\|1114805_1115900_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340831
CP023864.1\|AUI56246.1\|1116023_1116278_-\|DUF5053-domain-containing-protein	unknown	unknown	gnl\|CDD\|374564
CP023864.1\|AUI56251.1\|1124548_1126249_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224563
CP023864.1\|AUI56241.1\|1106155_1106350_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56240.1\|1100336_1101206_+\|DDE-transposase	unknown	unknown	gnl\|CDD\|376574
CP023864.1\|AUI56256.1\|1130870_1131056_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56242.1\|1106410_1108165_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56244.1\|1112834_1113728_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56716.1\|1113736_1114663_+\|glycosyl-transferase-family-2	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.98772e-13
CP023864.1\|AUI56245.1\|1114805_1115900_+\|glycosyltransferase	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	3.69089e-14
CP023864.1\|AUI56246.1\|1116023_1116278_-\|DUF5053-domain-containing-protein	gnl\|CDD\|374564	pfam16476, DUF5053, Domain of unknown function (DUF5053). This family consists of C-terminal of uncharacterized proteins around 100 residues in length and is mainly found in various Prevotella species. The function of this family is unknown.	1.18474e-29
CP023864.1\|AUI56254.1\|1128303_1130097_+\|peptidase	gnl\|CDD\|274507	TIGR03296, hypothetical_protein, M6 family metalloprotease domain. This model describes a metalloproteinase domain, with a characteristic HExxH motif. Examples of this domain are found in proteins in the family of immune inhibitor A, which cleaves antibacterial peptides, and in other, only distantly related proteases. This model is built to be broader and more inclusive than pfam05547.	3.60573e-57
CP023864.1\|AUI56243.1\|1110208_1111285_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.62618e-37
CP023864.1\|AUI56251.1\|1124548_1126249_-\|hypothetical-protein	gnl\|CDD\|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	1.60166e-48
CP023864.1\|AUI56240.1\|1100336_1101206_+\|DDE-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	4.21013e-53
CP023864.1\|AUI56715.1\|1111271_1112777_-\|hypothetical-protein	gnl\|CDD\|240530	cd13125, MATE_like_10, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. This family might function as a translocase for lipopolysaccharides, such as O-antigen. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	2.35342e-51
CP023864.1\|AUI56244.1\|1112834_1113728_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	4.45377e-36

>CP023864.1|AUI56246.1|1116023_1116278_-|DUF5053-domain-containing-protein
METVMTKPVVVTDMKRKVQDILMAVSWRDFAGTYFQKSSSWFYHKMDGIDGNGGAGGFNEQEAEQLRNALMDLSARIRRAAENI
>CP023864.1|AUI56245.1|1114805_1115900_+|glycosyltransferase
MRILLLGEYSNVHNTLAKGLRQLGHTVTVVSNGDFWKNYPRDIDVARPSGRLGGLRLLAKIYALLPRLRGYDVVQFINPMFFELKAERLSSIFRYLKKHNKKLILCGFGMDYYWVDTCSTTMPLRYSDFNIGSRLRQNEEAKAERKDWIGTEKERLNILMANECDAIVTGLYEYWRCYEPHFPKKTVFIPFPIVVGERPNIPDTPPDLLNLFIGISKSRSAYKGTDIMLRAAETVKEHYPDKLNLKLVTGLPFDEYVRTMLGSDAIMDQLYSYTPSMNPLEAMAHGIICIGGGEPENYAILNETVLHPIINVLPTYESCVEELTKLVNNLSLIPSLRRQSYEYVCKHHDFIKVAQAYIELYRGL
>CP023864.1|AUI56716.1|1113736_1114663_+|glycosyl-transferase-family-2
MVTYYSESIDILRDCVNSILALSLNETERQIIVVDDGADYSPINELLALSADIIYVRQPNQGLGQARNTGLALAEGSFVQFVDADDMLLTSTYEQCLDIIRYQETDMVLFESTDKTTVKPLADAQGPVSGTEYMTHNNINGSVCTLLFHKDILHDLRFPKGTLHEDEEFTPQLMLRAESIYTTHNKAYYYRKREGSIMHRRDRRWRIRRLADAEQVIYRLQEGVDHLPVKERIAMERRIAQLSMDLIYNVITLTHDETHLNHVLQRLSQHGLFPLPDKDYTSKYKWFRRMTNSSFGRRLLLMTLRLKR
>CP023864.1|AUI56244.1|1112834_1113728_+|glycosyltransferase-family-2-protein
MSLSIIIPIFNVEDTLRRCLRSVLAQIDNTMEVVLVDDGSTDASRQIAEEMTADRANCRLIYQTNRGLSAARNAGIDVATGDYITFVDSDDFVAEGSYAALMAVLAAHPDYDILEYPALLHYGCASKQRLLTFDDTTVDSVRDYWLRGGHLHTYACNKIFRRDLFSEIRFPVGKVFEDVYTYPYLLQRAKVVATTSVGLYYYCQNDRGITAQAGGKELTDLLNAHLKHLHLWGELTPAYYEALVNIQMDVYETTQAAPLLPVLPYKGTLKLFILHLIGLKRLCQLNQFIHKIRKISH
>CP023864.1|AUI56715.1|1111271_1112777_-|hypothetical-protein
MKKVSNTDSYLHILKYISLFGGVQVLNVLIGIVRNKCVAMLLGPQGVGLISLFNSSTRLIGDATNFGIPMSAVRNLAEDYDKGDEEKLTTDIAVVRSWSLLTALLGLFICIALSPLLSRYTFSWDGHTLHFVLLSPCVALTALAGGELAILKGVRKLGALAAISVYNVLAALVLTVPLYYLFGDTAIVPSLVLMALVQLLLTIVVSYRLYPPHVSLRKSLLDKGWGMIRLGTAFVLAGILGSGAELIIRSYLNNVADLSTVGFYNAGFMMTMVYAGMVFSAMETDYFPRLSGVNSLRFTFNQIVNRQIEVTLLLISPLLSFFLLFLPQLILFLYSDKFLPALGMAQVLVLAMYVRAIRLPVEYIPLAKGDSRSYLILEGLYDLLLVSLVLLGFWKGQLFGAGLGAAAAGVLNLGCVYGYAYARYDYRLSSSVVVYTLIQMTIGLLVFFCVRSEHDSLRWGAALTLCLTSTIVSLRVLRSKSGLWNTMINKVKNKFTRHAKD
>CP023864.1|AUI56243.1|1110208_1111285_-|glycosyltransferase-family-2-protein
MPKISILVAVYNSAAYLPQCLDSLLGQTLHDIEVLCVDDSSTDNSLAILRDYAERDRRVKVFALDENHGIAFARNVALSNASGEFICFVDSDDWLAPNALEAVCKTFTDDVDSVLFQVVLHYADGREKTYPMPPFEALSGERAFVDSLTWKIHGVYAIRAAIHHAYPYDDALRTYSDENITRIHYLKSRKVAVCEGVYYYRQHTSSTTHRVSVRRFDYLLANERMRCQLVAIGTSEVNLRCYETIRWQNLVGLYLFYYLHRHELSATDRQEALSIMRHVWQTIHLQQVSPSLRRKFGYIPFRPSQPSHRSSWSSLRCPTRLLHRPSWFPFRPLWLLFRLQEELYFTLRALVGRNKEAK
>CP023864.1|AUI56242.1|1106410_1108165_+|hypothetical-protein
MKNIVSKLLVTGLVCACFASCSTESIEEVGGKKAEDYKGMTCFSDEGPATRTAGKYVAQSSTEPAHVAFLWTQGDKIWVNTTGGTTFEKNDKDDISEQVATSNFYFKKNLTAESYKVRYTGTVSDKADEVVFAAKQKQTAPNSADLIGQYGDCGIATATKNANQKYSFNLAHKAGYLVLTPYSSVHKFDSSVGVRAVYVTANEGLTGTYTMAADGKLTKKTEEGKQIVWYYQEDVAGHNNINEEDGKPFLPIPATSDASKNGIIIVLPPGEYTNLSIEYLLVDPLSGGKGYYKKSYKGTVKVEAGKPHYIAENIKLYEYDKNQYYTWDAATDEYFWKGHEDRQPILPGDVMEYREDGFPDPTGTTDARSYNHSQGHTTTVDGNKALKSAANAMNVNEALWLVEKGSPMWDKTKLYAITYRDNVCHLFNTGVWFKTLKKIAADEGKTLEALKTLAPNGKDYRIDPAAPEVNVEIASFGRPAKANTNADYMFLPCTGFYGFKHTEGASAQLETPYKIAAPLIGATAMYWTSSAAARSSEGAYALSIFSSAVIDEYTVSVINTTKYSGHPILFDNMGVNGPGKFRIK
>CP023864.1|AUI56241.1|1106155_1106350_+|hypothetical-protein
MIKLNELDLLYASSTARKDYVCPAAMLVHIEPEGCLAAGTTRMGGGHENAYDDDNEWEEEEDDN
>CP023864.1|AUI56714.1|1104796_1105027_-|hypothetical-protein
MNIVLDITRKQVTTSELLKHRPNLRTGFLSSLGLTSVRRFERYLQGNDREDLQRDAKVIARDMNVAIKYITNGRKK
>CP023864.1|AUI56240.1|1100336_1101206_+|DDE-transposase
MEHAQDWLLFEDNIGESLSIDETCLSSGEVYTFLTNKAGKGRKGTLVAVVKGTKAEDVIQVLKKINISKRNTVKEITLDLSSSMMRIARSVFPKALITNDRFHVQKLYYDALDDMRIAYRWMARDKENQEIREAKSEGKEYIPFRYSNGDTRKQLLARAKFILTKHKTKWTETQKGRAQIIFEHYPTLKKAYDLAMKLTDIYNIKSIKDAARLKLAKWFNEVEELGVDNFYTVIDTFENHYQTILNFFVNRATNANAESFNAKVKAFRAQFRGVTDIPFFLYRLMKLCA
>CP023864.1|AUI56247.1|1117888_1118566_+|hypothetical-protein
MQRQQCEGQKGRAWSWELTIIMLIQLVSAGLYGLIFILMYDSIHLRWGLGYALLWTALLSPLALMIAARKSRWKLYIRIYGALMAFALWLMAVFCQLLGADIFLPATCYCKDGDYLVRRTYDFFDNKKIGVYKVEDLTERLQSTYSYASLDSIKVYESLNAIAFYCSPHIEKGPFGNNHIGPIRVLEQLTDDPLDSVQIKGVEQLARRRNLKIGISLVDYLEENE
>CP023864.1|AUI56248.1|1118565_1120518_+|hypothetical-protein
MMNYPALKQHAYLVVTLLALTLLGSSFKGGVTDRDDLPDSIRMAVDSLNKFGLFAQTYRLGTNGTPSAQYDYADWLRRNATADQLATIAKTGSSPVTRLWALRLLLEEPHPQVVDVLKAAVNDTTETQEGYGCLYSNMPFNLAAFKNYYFDQENVQTKETQEAIDSMAFFDFMRRYDYDTEILEQLEPKPNYYAAAAEAADSGRVGILPLLVKYKNPNDRQRINRLLMADFEKEGEVSAMCYNAVETWGKPDFEEYAKHVCQAVIGKPKDYNSNFYLPLLFRYPAPWSYQLIENVLAGKDRYSDIEEYKEYMKSRADEGEVPPLFQSLYDRYMQERRSVRSGRPQTEESRRVLKMAVDALNKESYFAESEKKGTYPTYRLEQIDYADSIYYNATTDQLVALATSSPSRITRLWALRFLSEEPNKHVLGILRRAINDTTSVWLMSRMGVHQVEPYNRLAFRYYNEASTNWPEEMQTPIDNLLFFVYMKRYGYRDDLLCYLRPLKRYHPTIIKEADKGNTDVLTFLLQYKNPNDIGRINKLLRLDLKKNGKQTDTAYMLQIFWKKPDFEWYVKTICLAADKDKGLYYDPRYISLMWDYPAPWSYHLFEKILSGNDPLTIRDVVMNVLREKAEQNAVPTAFRPLIDKYGEKER
>CP023864.1|AUI56249.1|1121112_1121304_+|hypothetical-protein
MSLCLKKNICLHLSLCHYVLKRISVSICHYVIMSKKVHLSPFVIMSLCLKKNICLHLSLCHYV
>CP023864.1|AUI56250.1|1121547_1122606_+|hypothetical-protein
MSYSVTLSPIPCHPLSTGHSVFKRAAHAILSLLLLVLFVGSHSACARPSAQLSDTAKIALDSLHRCRYMALTRGIGVAGTPSKQFVYANQLSRHTTTDQLVVIANTDTSHIARLWAFRVLLYKGDTQVLDVLRQAFSDTTHVEFMSGCSGYDEPYNRAAIIVYGYDSSLLQLSDPLRNALDSLIFFDYSKPHGFADGLVIDFKPHKTYYTTVVEQADKGNDAILPLLAKYKNPNDRERLNRLLKANMKREGMASDAGCEAVTTWNDPSFEWYAKAACHAALSQQDAYVDGILPLLWAYPSAWSRQLFQKILSPTADSFNREAAIEFLSQQAKAHPIPPTFRPLYERYVRGRR
>CP023864.1|AUI56251.1|1124548_1126249_-|hypothetical-protein
MKKLILLTFLCVITITSQAQTSLVDYLTTAMPKRETRAVWLTTLANLDWPKTYATSPERIEQQKQELVDILDKYQKANINTVLLQARVRAATIYPSALEPWDKCITGVEGGVPGGDYDPLAFAVAECHKRGMEIHAWIATIPVGAKGSLGCRTLMKKGFRIRSFSTGAYLDPSDPSVAPYLASICGEIVRNYDVDGINLDYIRYPDGWPRPSYRLGDTPDQRRSNITAIVRAIHDEVKAIKPWVKMSCSPIGKHADLGRYSSKNFNAHDRVSQEAQEWLRQGLMDQLYPMQYFRGDNYYPFLADWMENRYQREIVSGLGTYFLDPREGNWTLSDLTRQMYVSRNLGAGHAHFRSLFLTSNKQGVYDFEKQFNAALALPHAMLTTATMGDAPVAAGASLVVRNDDKSVVIRWKSVAPYYNIYVSNTYPVDTDDPRNLLFARFVGQSLRLKNVSPDLFFAVRGMSRYGVETPALQEVDNAVSLAPSHVSLLANDGNTLSLPAAAKLTDADHYVVLTLQGSAVRSVKAKTIHNNQLNIASLPNGMYSLQVWGRKKRSFRVGYFMVRRGM
>CP023864.1|AUI56252.1|1126720_1126948_+|hypothetical-protein
MSLWPFVCSVHLCSSVRNRTHPRYEMSHKQIAGEFFLSRWGVLSLTERTELTEPFCARFEPTEGLRHTEVTERYC
>CP023864.1|AUI56253.1|1126985_1127255_-|hypothetical-protein
MQEGHVLERRKASSCSILNLFSKREGNSLRNILTFPIYMVSTLSLKEDLSFSHEGPFFLSQRNTEEQNTQRPTETLSQPISQNLTANVS
>CP023864.1|AUI56254.1|1128303_1130097_+|peptidase
MKKIFTLLAGLLIASSSFAIPAMKIWRTVKQADGTLLKVMTVGDEHFNYAMTEDGIPLVPYHGNYYYAHIVDQQLVASAVLAHNKELRHGREELAAAALEEVRQLQRNKEQQVSSKPFGLSDGTTWEGSKKGLVILVEFADKSFTNPQNVLTLRPRESDIKTLYEKMLNEEGYKNDNGAIGSVHDYFKDQSNGRFDLTFDVIGPVKLAHPYKYYGEHTQNMNDANAPQMIIDACKAVKGQVDWRRYDWDGDGEVEQVYVIYAGEGEATGGNADTVWPHKYSLTDAGLSALHFNGQTIDTYACSNEIIRAKVNGMQRVYYSGIGTICHEFSHCLGLPDFYDTRGGKNVGSGRYDLMCGGSYNGGPESLVNVYGGTGIGTVPAGYDAYEKAFMGWLKPTTLGNAAVDVKDMKGLSEGGEAYVLYNPDNKDEYYILENRTPYRWDSELPAHGLMVFHVDYNAMAWRMNNLNAAAAQHHPRFTIVPADGILNSDSQDNDPFPTALNNSLTSSTDPRLNFYTNYRVTDLAGITGIAKNHDNTISFRYTPLNTTAAITSLPADNAAQPSAAYTLSGIKTNPQQTGRRQIVIVKDKEGRGCKVY
>CP023864.1|AUI56255.1|1130530_1130767_+|hypothetical-protein
MKIKTATLIGLIGAITSLVISLYFLVYNTGIISFFVDTFDFFPLNLVDTYSPFLSSFGSLISKITLCIFFYVVYKHQK
>CP023864.1|AUI56256.1|1130870_1131056_-|hypothetical-protein
MSLWNAVCSVLLCFSVRNRTIARLAGEFFLSQSALSSLSIIAHSFEPTEGLRHTEFTERYC

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Crispr_ID: CP023864_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_13

1144976-1145069

Orphan

Consensus_repeat	Method
GTGAGTTCTGTGAGAGACAAAACTCCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_13

>merge|CP023864|13|1144976-1145069|CRISPRCasFinder
GTGAGTTCTGTGAGAGACAAAACTCCCAACGGCTTAAGACCTTCGCAGATAGGCTTCTGTTCATCCGTGAGTTCTGTGAGAGACAAAACTCCCA

>CP023864|13|10|1144976-1145069|CRISPRCasFinder
GTGAGTTCTGTGAGAGACAAAACTCCCA	ACGGCTTAAGACCTTCGCAGATAGGCTTCTGTTCATCC
GTGAGTTCTGTGAGAGACAAAACTCCCA

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56268.1\|1149689_1150058_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|214864
CP023864.1\|AUI56262.1\|1141125_1141695_+\|invertase	unknown	unknown	gnl\|CDD\|184041
CP023864.1\|AUI56259.1\|1135753_1136968_-\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
CP023864.1\|AUI56260.1\|1138116_1139646_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372499
CP023864.1\|AUI56275.1\|1157926_1158613_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56263.1\|1141676_1142624_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
CP023864.1\|AUI56256.1\|1130870_1131056_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56273.1\|1155393_1155597_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56258.1\|1134426_1135377_-\|glycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240639
CP023864.1\|AUI56261.1\|1139695_1139926_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56267.1\|1148858_1149041_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56255.1\|1130530_1130767_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56274.1\|1156150_1156336_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56266.1\|1146331_1146586_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56264.1\|1142929_1143595_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56257.1\|1133422_1134070_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225415
CP023864.1\|AUI56272.1\|1154688_1154940_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56269.1\|1150451_1150802_+\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	unknown
CP023864.1\|AUI56271.1\|1152644_1153253_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56270.1\|1151913_1152540_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56268.1\|1149689_1150058_+\|SMI1/KNR4-family-protein	gnl\|CDD\|214864	smart00860, SMI1_KNR4, SMI1 / KNR4 family. Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation.	0.000203769
CP023864.1\|AUI56262.1\|1141125_1141695_+\|invertase	gnl\|CDD\|184041	PRK13413, mpi, master DNA invertase Mpi family serine-type recombinase.	3.06083e-110
CP023864.1\|AUI56259.1\|1135753_1136968_-\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
CP023864.1\|AUI56260.1\|1138116_1139646_-\|hypothetical-protein	gnl\|CDD\|372499	pfam13149, Mfa_like_1, Fimbrillin-like. A family of putative fimbrillin proteins found by clustering human gut metagenomic sequences. Analysis of structural comparisons shows this family to be part of the FimbA (CL0450) superfamily of adhesin components or fimbrillins.	0.00129866
CP023864.1\|AUI56258.1\|1134426_1135377_-\|glycerate-dehydrogenase	gnl\|CDD\|240639	cd12162, 2-Hacid_dh_4, Putative D-isomer specific 2-hydroxyacid dehydrogenases. 2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	0
CP023864.1\|AUI56257.1\|1133422_1134070_-\|hypothetical-protein	gnl\|CDD\|225415	COG2860, COG2860, Predicted membrane protein [Function unknown].	3.5304e-50
CP023864.1\|AUI56263.1\|1141676_1142624_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	2.45804e-74

>CP023864.1|AUI56264.1|1142929_1143595_-|hypothetical-protein
MEVERLRQRAKKKLLRVTFPDGKVICCSKSVNTMIEALVEIGAERFPSIEMTMCHLPLLSKTIYPQYKEWMKPICDGWYLNTQADTETRYMQLRSISQQLSLGLVLEMGVGFEVQAASTTEKKQRTRDRLVVRFADGECFDSVRASETYLGTIKKLGVETIMRKHIPWGNYDLITSTQQTKYQVQIGDNRWVTVPTTTKDKARVLKVISAMLHIKIEVTCL
>CP023864.1|AUI56263.1|1141676_1142624_-|IS30-family-transposase
MYKQLTSEQRYTISVLLQNRTKQKDIAKAINVSASTVSREIRRNSGVRRHYNWETAQANAVQTRRRKPGNRSVDKDVMEEAKCLLITEQWSPEQISGVLAKDGKYISHETIYRMIRKDKAEGGTLYKHCRHKLKHRTRPVGGKRISIPNRTSISERPTEADGKRFGDFEMDTIVGRGNHGAIVTLIERSTNMLFMRKLKKGKNAKELARTVIHLLSPFKEHIKSITTDNGTEFACHEMIAKSLGVTIYFADPYASWQKGAIENANGLIRQYVPKKETFEHISQQQITKYSKKINMRPRKKLDFKTPQDCFYELIK
>CP023864.1|AUI56262.1|1141125_1141695_+|invertase
MIYGYIRVSSDKQTVENQRFEISNFCKHQNLSIDDWIEETISGTKNYSKRELGRLLKKVRKDDIIICSELSRLGRNLFMIMEILNICMSKECRVWTIKDNYRLGDDIQSKVLAFAFGLSAEIERNLISQRTKEALARKKAEGVLLGRPKGRKSSPDKYKLSGKEVLISELLKTGTREFNKQVQIYLISS
>CP023864.1|AUI56261.1|1139695_1139926_-|hypothetical-protein
MKIMEKVKRAYAQPACGFVCTEIETLMNQASGSAGTIGHGSQAGDAKQAPVWMDNEEDEEEEKSSWVSTRRSDLWD
>CP023864.1|AUI56260.1|1138116_1139646_-|hypothetical-protein
MKQLTQFAACAVAALSVVACSSEDSAQQDNAKQNTAKGVATFDGSQPGNDTRALTRTTATYTLGGDAKVFWSSADKIFVQDDANTFHQSNAANLYNPSNKAKAIFSLASGSFTLNNREVRYTGENGTDANTVTIASTQTQTTANDFSHLGTSGDCGTATATGSNGNYTFTLNHKASYLCFVPRCMNTDLGPNIKLTKIKVTADQPIAGKYDFSTGSLAQKAGETYSNTITLNTSDFSLNTTTSSLATNGAYMVVAPGTYNFTITYTIKDPTTNVEGDVVKTVSSYNCQEGKINDITANLTPEDYSSLKYYMWDAQSHYWLGHEGVQPYLNHASASGYPAATDVNRYYNSAHYPAQATNSCANCPNVNEIAWYVDRGNPHFERVTLWSMRGHLYIGGLWLLHRNNIPGFSSVKAPDGIDYVHSNTDMSLMKTPTQGKPTNLSDYFFLPSAGYYGNPEGRFDGITYGGWYWSRSTYMDTPFVESYLLHFRSTNLNVIRYQRLYGFNTWTAQ
>CP023864.1|AUI56259.1|1135753_1136968_-|replication-associated-recombination-protein-A
MEPLAERLRPRRLEDYIGQEHLVGEGAVLRRMIDSGRIASFILWGPPGVGKTTLAQIIAQRLETPFFTLSAVTSGVKDVREVIERAQSNRFFNSASPILFIDEIHRFSKSQQDSLLGAVEKGTVTLIGATTENPSFEVIRPLLSRCQLYVLKSLEKADLLKLLHRAVTEDVELKKRHIELRETDAILRYSGGDARKLLNILDLIVAAETGDDIVVTDKMVEERLQENPLAYDKGGEMHYDIVSAFIKSIRGSDPDAALYWMARMIEGGEDPKFIARRVVISAAEDIGLANPNALLLANAAFDAVTKIGWPEGRIPLAEAVVYLARSKKDNSAYKAINRAIELVRQTGNLPVPLHLRNAPTQLMKDLGYGDGYKYPHDYEGHYVKQQYMPDELGPPPTPPKEGGA
>CP023864.1|AUI56258.1|1134426_1135377_-|glycerate-dehydrogenase
MKIVILDCHAVNPGDLSWEPIKEIADCVVYERTKQDEVVERAKDADGILINKVNITRELLDQLPRLKYIGELATGYNNIDVEAAHERGIVVCNIPAYSTDSVAQHVFALLFNATTHVDHYAEAVRRGEWSKQKDFCYWDTPLIELSGKTLGIVGLGHIGQKVARIAHALGMDISAYTSKNSSDLPECIRKTTLEGLLSTSDVITLHCPLTAANTRMINAETLKKVRRGAILINTGRGGLIDEQAVADALASGQLSAYCADVMTDEPPHNDNPLFNQPNAYITPHIAWATREARERLMNICVENIKKFIEGEPQNRV
>CP023864.1|AUI56257.1|1133422_1134070_-|hypothetical-protein
MLYTDPHLVRTLQVILEFLGTFAFAISGIRHAAQKHFDWFGGYVCGFAVAIGGGTIRDTMLGVRPFWMTNIMYVLCTGLALFLVILSRRWIKRLSNAWFVFDTLGLALFTIAGIQKTVALGYPFWVAIIMGCITGVAGGVIRDVLLNNIPVIFHKEIYAVASVGGGLIYWGLFALGMSLPLTVIITFVAICIIRFIAVGYHISLPTLQDEDEKKE
>CP023864.1|AUI56256.1|1130870_1131056_-|hypothetical-protein
MSLWNAVCSVLLCFSVRNRTIARLAGEFFLSQSALSSLSIIAHSFEPTEGLRHTEFTERYC
>CP023864.1|AUI56255.1|1130530_1130767_+|hypothetical-protein
MKIKTATLIGLIGAITSLVISLYFLVYNTGIISFFVDTFDFFPLNLVDTYSPFLSSFGSLISKITLCIFFYVVYKHQK
>CP023864.1|AUI56266.1|1146331_1146586_-|hypothetical-protein
MGKRAMKKLKEKLEKRQENGAEKIEMSYTYRTIRAAKHLRTLSKNGERGVRRGREDKCDKKGGCIKNLFKIVFTHGKKFYIPLN
>CP023864.1|AUI56267.1|1148858_1149041_+|hypothetical-protein
MIKKYYIALRETPSKYEYNVSSDFVYNLHEIRMLRIEYGNMPFLLQEGRLQRARGACSRT
>CP023864.1|AUI56268.1|1149689_1150058_+|SMI1/KNR4-family-protein
MNTEENNKQIAELAQRLNMKFPSSYVDFLSEIDNGDVFEIKGTGICMYSYADLEERNLTYEVEAFEPNYFMIGQDGDLAYFIRRDNPIDDSIYSNDLGALGASEMKKEADDILRFIALVEEK
>CP023864.1|AUI56269.1|1150451_1150802_+|cyclopropane-fatty-acyl-phospholipid-synthase
MDKERILEKLEWLFKSALSAPDPTSEEFKEEQFLFFENYVRFLQDNGFTTRVLLKENEKATAESQIKIGDLTPEGLKFYFYGIRKWREKYDRAKDKKKAINDFNFIEKKLKQFREQ
>CP023864.1|AUI56270.1|1151913_1152540_-|hypothetical-protein
MRNNILFVLLILFSFYNCYAAKEKEREISVHNEKNMFTSKDAEQYYQMTPDSVKYVCCNTDSLPMAVFMPNDQLCNGIKENIFDVKSEEKIPYYTIKTIVYKGIVCRIIIYNYTGESDIDFLNIQINSYKDNKLIDRLLLDSRFISEIMYYNDFTITKDFVITLHKYHKSLVEIDENGDIIGGVVNPKVRMETVRYFLDDTGLFQRKK
>CP023864.1|AUI56271.1|1152644_1153253_-|hypothetical-protein
MWNKHPQTVGSVTITAIVPGIVTYHVYWDGRIEKHILRAIQKGYEDKYKYSYHDEKRQKYEIGFASIKPTKVYEAKSGTVNLIVLRCVQDVYRDGNKHYKLTINSQRDYANEHTWASLLGEKLEVCFDDIVCNGFSMSDGSPVVSSSHLNGKNGDIRYLRKDRSGKILDLTATPHELDIKRQIAWNKALYKYGWKSLLVWPY
>CP023864.1|AUI56272.1|1154688_1154940_-|hypothetical-protein
MFLNQEKHVESLREAKDLTNSKRGKEREGWGERLPRYPYKKEVSTPFQAAHSTVHSLPQQRPQLAPPPSPPPEGRGVITEIPM
>CP023864.1|AUI56273.1|1155393_1155597_-|hypothetical-protein
MDAQKSVLIDETETSIIYEIINKKSAKYILLSQSSQMNRIYRGLAQNPKGDRNHRDKGTVGGIKILE
>CP023864.1|AUI56274.1|1156150_1156336_-|hypothetical-protein
MRKCDKKVKKGQGKRRQSNKGNSNDGWEGEVKEWIKEDRVTERTVTMIVWGSKRQDKKKTE
>CP023864.1|AUI56275.1|1157926_1158613_+|hypothetical-protein
MKLGTFSVSSKAGEVLNWSMGLYLAFSGLSFIDNWTSAPNEGQGVITQAFATFQSSSMIQVIEAVALLATELTMLEVFRRCLSRNKHFTAQLAVIVVMVLTFLIAAASNLPMFLCTPEELSNGISGVALSKFSMFSNACGLVLFVTNLILCIQLMVKYAGRIRLYGASLIGCDVAISLANMVYGYIYNNVGGVTMDQITTYGTIVSILSFVLGLAPYCLLRRTMVAAD

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Crispr_ID: CP023864_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_14

1154660-1154749

Orphan

Consensus_repeat	Method
GGGGAGGGGACGGGGGAGGGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_14

>merge|CP023864|14|1154660-1154749|CRISPRCasFinder
GGGGAGGGGACGGGGGAGGGGCCTCTTCCTCACATGGGTATCTCGGTGATCACTCCCCTTCCCTCCGGGGGAGGGGACGGGGGAGGGGCC

>CP023864|14|11|1154660-1154749|CRISPRCasFinder
GGGGAGGGGACGGGGGAGGGGCC	TCTTCCTCACATGGGTATCTCGGTGATCACTCCCCTTCCCTCCG
GGGGAGGGGACGGGGGAGGGGCC

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56268.1\|1149689_1150058_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|214864
CP023864.1\|AUI56262.1\|1141125_1141695_+\|invertase	unknown	unknown	gnl\|CDD\|184041
CP023864.1\|AUI56278.1\|1163036_1163603_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56274.1\|1156150_1156336_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56275.1\|1157926_1158613_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56267.1\|1148858_1149041_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56280.1\|1165289_1165940_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56277.1\|1162424_1162877_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56263.1\|1141676_1142624_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
CP023864.1\|AUI56265.1\|1144823_1145039_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56269.1\|1150451_1150802_+\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	unknown
CP023864.1\|AUI56271.1\|1152644_1153253_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56266.1\|1146331_1146586_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56276.1\|1159204_1159867_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|349760
CP023864.1\|AUI56264.1\|1142929_1143595_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56717.1\|1160188_1160800_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56718.1\|1161142_1162384_+\|transposase	unknown	unknown	gnl\|CDD\|376573
CP023864.1\|AUI56279.1\|1164398_1164872_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56273.1\|1155393_1155597_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56270.1\|1151913_1152540_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56268.1\|1149689_1150058_+\|SMI1/KNR4-family-protein	gnl\|CDD\|214864	smart00860, SMI1_KNR4, SMI1 / KNR4 family. Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation.	0.000203769
CP023864.1\|AUI56262.1\|1141125_1141695_+\|invertase	gnl\|CDD\|184041	PRK13413, mpi, master DNA invertase Mpi family serine-type recombinase.	3.06083e-110
CP023864.1\|AUI56276.1\|1159204_1159867_+\|ParA-family-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	8.82986e-28
CP023864.1\|AUI56718.1\|1161142_1162384_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	0.00223127
CP023864.1\|AUI56263.1\|1141676_1142624_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	2.45804e-74

>CP023864.1|AUI56271.1|1152644_1153253_-|hypothetical-protein
MWNKHPQTVGSVTITAIVPGIVTYHVYWDGRIEKHILRAIQKGYEDKYKYSYHDEKRQKYEIGFASIKPTKVYEAKSGTVNLIVLRCVQDVYRDGNKHYKLTINSQRDYANEHTWASLLGEKLEVCFDDIVCNGFSMSDGSPVVSSSHLNGKNGDIRYLRKDRSGKILDLTATPHELDIKRQIAWNKALYKYGWKSLLVWPY
>CP023864.1|AUI56270.1|1151913_1152540_-|hypothetical-protein
MRNNILFVLLILFSFYNCYAAKEKEREISVHNEKNMFTSKDAEQYYQMTPDSVKYVCCNTDSLPMAVFMPNDQLCNGIKENIFDVKSEEKIPYYTIKTIVYKGIVCRIIIYNYTGESDIDFLNIQINSYKDNKLIDRLLLDSRFISEIMYYNDFTITKDFVITLHKYHKSLVEIDENGDIIGGVVNPKVRMETVRYFLDDTGLFQRKK
>CP023864.1|AUI56269.1|1150451_1150802_+|cyclopropane-fatty-acyl-phospholipid-synthase
MDKERILEKLEWLFKSALSAPDPTSEEFKEEQFLFFENYVRFLQDNGFTTRVLLKENEKATAESQIKIGDLTPEGLKFYFYGIRKWREKYDRAKDKKKAINDFNFIEKKLKQFREQ
>CP023864.1|AUI56268.1|1149689_1150058_+|SMI1/KNR4-family-protein
MNTEENNKQIAELAQRLNMKFPSSYVDFLSEIDNGDVFEIKGTGICMYSYADLEERNLTYEVEAFEPNYFMIGQDGDLAYFIRRDNPIDDSIYSNDLGALGASEMKKEADDILRFIALVEEK
>CP023864.1|AUI56267.1|1148858_1149041_+|hypothetical-protein
MIKKYYIALRETPSKYEYNVSSDFVYNLHEIRMLRIEYGNMPFLLQEGRLQRARGACSRT
>CP023864.1|AUI56266.1|1146331_1146586_-|hypothetical-protein
MGKRAMKKLKEKLEKRQENGAEKIEMSYTYRTIRAAKHLRTLSKNGERGVRRGREDKCDKKGGCIKNLFKIVFTHGKKFYIPLN
>CP023864.1|AUI56265.1|1144823_1145039_-|hypothetical-protein
MNRSLSAKVLSRWEFCLSQNSQMNRSLFANVLGRGMFYLSQIFTDEQRPFSEQGEPTNVCKQTTDITEHYC
>CP023864.1|AUI56264.1|1142929_1143595_-|hypothetical-protein
MEVERLRQRAKKKLLRVTFPDGKVICCSKSVNTMIEALVEIGAERFPSIEMTMCHLPLLSKTIYPQYKEWMKPICDGWYLNTQADTETRYMQLRSISQQLSLGLVLEMGVGFEVQAASTTEKKQRTRDRLVVRFADGECFDSVRASETYLGTIKKLGVETIMRKHIPWGNYDLITSTQQTKYQVQIGDNRWVTVPTTTKDKARVLKVISAMLHIKIEVTCL
>CP023864.1|AUI56263.1|1141676_1142624_-|IS30-family-transposase
MYKQLTSEQRYTISVLLQNRTKQKDIAKAINVSASTVSREIRRNSGVRRHYNWETAQANAVQTRRRKPGNRSVDKDVMEEAKCLLITEQWSPEQISGVLAKDGKYISHETIYRMIRKDKAEGGTLYKHCRHKLKHRTRPVGGKRISIPNRTSISERPTEADGKRFGDFEMDTIVGRGNHGAIVTLIERSTNMLFMRKLKKGKNAKELARTVIHLLSPFKEHIKSITTDNGTEFACHEMIAKSLGVTIYFADPYASWQKGAIENANGLIRQYVPKKETFEHISQQQITKYSKKINMRPRKKLDFKTPQDCFYELIK
>CP023864.1|AUI56262.1|1141125_1141695_+|invertase
MIYGYIRVSSDKQTVENQRFEISNFCKHQNLSIDDWIEETISGTKNYSKRELGRLLKKVRKDDIIICSELSRLGRNLFMIMEILNICMSKECRVWTIKDNYRLGDDIQSKVLAFAFGLSAEIERNLISQRTKEALARKKAEGVLLGRPKGRKSSPDKYKLSGKEVLISELLKTGTREFNKQVQIYLISS
>CP023864.1|AUI56273.1|1155393_1155597_-|hypothetical-protein
MDAQKSVLIDETETSIIYEIINKKSAKYILLSQSSQMNRIYRGLAQNPKGDRNHRDKGTVGGIKILE
>CP023864.1|AUI56274.1|1156150_1156336_-|hypothetical-protein
MRKCDKKVKKGQGKRRQSNKGNSNDGWEGEVKEWIKEDRVTERTVTMIVWGSKRQDKKKTE
>CP023864.1|AUI56275.1|1157926_1158613_+|hypothetical-protein
MKLGTFSVSSKAGEVLNWSMGLYLAFSGLSFIDNWTSAPNEGQGVITQAFATFQSSSMIQVIEAVALLATELTMLEVFRRCLSRNKHFTAQLAVIVVMVLTFLIAAASNLPMFLCTPEELSNGISGVALSKFSMFSNACGLVLFVTNLILCIQLMVKYAGRIRLYGASLIGCDVAISLANMVYGYIYNNVGGVTMDQITTYGTIVSILSFVLGLAPYCLLRRTMVAAD
>CP023864.1|AUI56276.1|1159204_1159867_+|ParA-family-protein
MKNKKIVFANQKGGVGKSTLCILFANYLAAKGRDVCIIDTDLQKTILMQRRKDKLIYEGEEEPYNVQDFDVTDVETMQSLVDSASQVEGYVLFDSPGNISEDGLAPLFVGADYIVCPYEYEDKALDSTGVFVQVLNVLREHNPQMSAKLFFVPNRIDPRIGTAEEQEMWRRTDEVFGNFGLVTPVVNSRATLKRTNTFELLGTQRDAVKKAFDYMLRRMK
>CP023864.1|AUI56717.1|1160188_1160800_+|hypothetical-protein
MVVMPGAMTDLAHRVQKGPRPNPITNSEETTMDEQEVDEPVQYDTNNVDQEVHTQVEEQQPEEYAETIADVDEPAAAPTAPTSSFRRVEPKQEAVDRKDRTAPAAKKLPKAEGRQLAREYSLAKDSGEDSWQIFLDLARDYKARDSRLATVYIDSDLKGVLDRLKSATSVKLPSTALLSAIVARFVFEHEKDIKNAIFGESLL
>CP023864.1|AUI56718.1|1161142_1162384_+|transposase
MEDLIDRIRQFSGSECVGHKHVLCIQDTTELSYDHMKGRLKEDDPDFGDGSMQLKKYSIFVHPTMIVDAESCLPIGFSSVRIWNRERIEGRKKTNKRATLPYKDKESYRWTLSAKESAECIPSDVRKTIVGDRESDVYAFMDETLEVGCDFLIRSTHNRKSSVGTDLDTLTEHLAKQKPMGEYSFSLPGRQGRKNRTAIMEVRFMPITLHAPHSNAGGKEKLDIYCVHVKERADSVPAGEEPVEWRLLTSHEVTNLAQAVQCIDWYRCRWLIEELFRLMKSKGFGIEDIQLEDGESTKKMISLTISAVLKCLILKRSYDTRREEVSAHILFTNVQLVVLHALMGMIHTKNPRSKDGRNPFKEDSLPWAAWIIARLQGWCDMGKDTRPGYITIKEGLRVFEYQVAFYTSLKKDV
>CP023864.1|AUI56277.1|1162424_1162877_-|hypothetical-protein
MKKLILFFCVLFGANAISQAQTTKCGVYQLINTKESKNVLKDHNIVLEKGANGKISGRFYGTTDDFVDAREGYLPGHFVAPMENLRVTKDSIFFTINVAHKDLFKNPIPRNVKTAKAAHNLKRAAWKSGWLGDNLQRSYAAALRKGVIRF
>CP023864.1|AUI56278.1|1163036_1163603_-|hypothetical-protein
MKRIKNIFYAIFLAFLFCNPTCAQNDVKITKVGKLIQESLPSTWSRDTFMTYYIAADADSTERFIKEGNWKPAYEKRYTPYNNVSLPLIRECFAKSISAVLTEEQKKLLNLIGKKSNIMWSKFYVFINSKKRFVKITMMNSTAKHLTQEQIYEILRLYSKCELPIHPVVGAFKEKEYYITGAPIHSIK
>CP023864.1|AUI56279.1|1164398_1164872_-|hypothetical-protein
MKKFYLAISLAICLASAPLTTYAQAKKAKSAAVTMNETQKEKQQFAYGFYKTYMNSLIYQLSDLYMVIAKKFVSPKVLKKTADTGADVLLNAQDCVKENLQTLKIKALNNDWFRVSFSWPTEKYEVIKDHIIYIKIKEQGKSFIIEDATTEMPKLTK
>CP023864.1|AUI56280.1|1165289_1165940_+|hypothetical-protein
MKSLIVSTVFLLGLLGLIYTVNYLYYRFSPVRSFPSVTTLSARALLGMFISGVGYFGTLFCLVSFDSELGLNHSVSLQIYLCIGVFLLLIAAIVGIFRYDKGVWLRRNPNHSRLFLPSWNEGSKNMGVSISRVDDINYGRGVSFSWFDGRFITAGRHSVAFEYYEYKFMAHRSIRKIIYKKEMSFNFKAGAVYVIKIIPERQTFQITQDTTVNFGL

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Crispr_ID: CP023864_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_15

1165948-1166066

Orphan

Consensus_repeat	Method
ACTACGAATTCCTCGAATGGCACGAATTATTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_15

>merge|CP023864|15|1165948-1166066|CRISPRCasFinder
ACTACGAATTCCTCGAATGGCACGAATTATTTTAACCTTTGAGCATAGAGTTTTGCACATTGAACTTTATGCTCTGTACGATTAGCGACTACGAATTCCTCGAATGGCACGAATTATTT

>CP023864|15|12|1165948-1166066|CRISPRCasFinder
ACTACGAATTCCTCGAATGGCACGAATTATTT	TAACCTTTGAGCATAGAGTTTTGCACATTGAACTTTATGCTCTGTACGATTAGCG
ACTACGAATTCCTCGAATGGCACGAATTATTT

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56277.1\|1162424_1162877_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56281.1\|1167134_1167605_+\|DUF4065-domain-containing-protein	unknown	unknown	gnl\|CDD\|226128
CP023864.1\|AUI56717.1\|1160188_1160800_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56276.1\|1159204_1159867_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|349760
CP023864.1\|AUI56289.1\|1176742_1178983_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56275.1\|1157926_1158613_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56280.1\|1165289_1165940_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56288.1\|1175627_1176740_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350194
CP023864.1\|AUI56282.1\|1167629_1168472_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56285.1\|1172684_1173164_-\|DUF3408-domain-containing-protein	unknown	unknown	gnl\|CDD\|378750
CP023864.1\|AUI56273.1\|1155393_1155597_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56287.1\|1174794_1175613_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56274.1\|1156150_1156336_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56284.1\|1171925_1172357_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56286.1\|1173927_1174527_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56718.1\|1161142_1162384_+\|transposase	unknown	unknown	gnl\|CDD\|376573
CP023864.1\|AUI56278.1\|1163036_1163603_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56279.1\|1164398_1164872_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56283.1\|1170874_1171942_-\|mobilization-protein	unknown	unknown	gnl\|CDD\|367497
CP023864.1\|AUI56290.1\|1178969_1180022_+\|DUF1848-domain-containing-protein	unknown	unknown	gnl\|CDD\|378091

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56281.1\|1167134_1167605_+\|DUF4065-domain-containing-protein	gnl\|CDD\|226128	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown].	1.48487e-16
CP023864.1\|AUI56276.1\|1159204_1159867_+\|ParA-family-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	8.82986e-28
CP023864.1\|AUI56285.1\|1172684_1173164_-\|DUF3408-domain-containing-protein	gnl\|CDD\|378750	pfam11888, DUF3408, Protein of unknown function (DUF3408). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 128 to 160 amino acids in length.	4.13296e-30
CP023864.1\|AUI56718.1\|1161142_1162384_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	0.00223127
CP023864.1\|AUI56288.1\|1175627_1176740_+\|hypothetical-protein	gnl\|CDD\|350194	cd18807, SF1_C_UvrD, C-terminal helicase domain of UvrD family helicases. UvrD is a highly conserved helicase involved in mismatch repair, nucleotide excision repair, and recombinational repair. It plays a critical role in maintaining genomic stability and facilitating DNA lesion repair in many prokaryotic species including Helicobacter pylori and Escherichia coli. This family also includes ATP-dependent helicase/nuclease AddA and helicase/nuclease RecBCD subunit RecB, among others. UvrD family helicases are DEAD-like helicases belonging to superfamily (SF)1, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF2 helicases, SF1 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	6.28001e-09
CP023864.1\|AUI56283.1\|1170874_1171942_-\|mobilization-protein	gnl\|CDD\|367497	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalyzing trans-esterification.	4.9901e-15
CP023864.1\|AUI56290.1\|1178969_1180022_+\|DUF1848-domain-containing-protein	gnl\|CDD\|378091	pfam08902, DUF1848, Domain of unknown function (DUF1848). This family of proteins are functionally uncharacterized. The C-terminus contains a cluster of cysteines that are similar to the iron-sulfur cluster found at the N-terminus of pfam04055.	2.40004e-133

>CP023864.1|AUI56280.1|1165289_1165940_+|hypothetical-protein
MKSLIVSTVFLLGLLGLIYTVNYLYYRFSPVRSFPSVTTLSARALLGMFISGVGYFGTLFCLVSFDSELGLNHSVSLQIYLCIGVFLLLIAAIVGIFRYDKGVWLRRNPNHSRLFLPSWNEGSKNMGVSISRVDDINYGRGVSFSWFDGRFITAGRHSVAFEYYEYKFMAHRSIRKIIYKKEMSFNFKAGAVYVIKIIPERQTFQITQDTTVNFGL
>CP023864.1|AUI56279.1|1164398_1164872_-|hypothetical-protein
MKKFYLAISLAICLASAPLTTYAQAKKAKSAAVTMNETQKEKQQFAYGFYKTYMNSLIYQLSDLYMVIAKKFVSPKVLKKTADTGADVLLNAQDCVKENLQTLKIKALNNDWFRVSFSWPTEKYEVIKDHIIYIKIKEQGKSFIIEDATTEMPKLTK
>CP023864.1|AUI56278.1|1163036_1163603_-|hypothetical-protein
MKRIKNIFYAIFLAFLFCNPTCAQNDVKITKVGKLIQESLPSTWSRDTFMTYYIAADADSTERFIKEGNWKPAYEKRYTPYNNVSLPLIRECFAKSISAVLTEEQKKLLNLIGKKSNIMWSKFYVFINSKKRFVKITMMNSTAKHLTQEQIYEILRLYSKCELPIHPVVGAFKEKEYYITGAPIHSIK
>CP023864.1|AUI56277.1|1162424_1162877_-|hypothetical-protein
MKKLILFFCVLFGANAISQAQTTKCGVYQLINTKESKNVLKDHNIVLEKGANGKISGRFYGTTDDFVDAREGYLPGHFVAPMENLRVTKDSIFFTINVAHKDLFKNPIPRNVKTAKAAHNLKRAAWKSGWLGDNLQRSYAAALRKGVIRF
>CP023864.1|AUI56718.1|1161142_1162384_+|transposase
MEDLIDRIRQFSGSECVGHKHVLCIQDTTELSYDHMKGRLKEDDPDFGDGSMQLKKYSIFVHPTMIVDAESCLPIGFSSVRIWNRERIEGRKKTNKRATLPYKDKESYRWTLSAKESAECIPSDVRKTIVGDRESDVYAFMDETLEVGCDFLIRSTHNRKSSVGTDLDTLTEHLAKQKPMGEYSFSLPGRQGRKNRTAIMEVRFMPITLHAPHSNAGGKEKLDIYCVHVKERADSVPAGEEPVEWRLLTSHEVTNLAQAVQCIDWYRCRWLIEELFRLMKSKGFGIEDIQLEDGESTKKMISLTISAVLKCLILKRSYDTRREEVSAHILFTNVQLVVLHALMGMIHTKNPRSKDGRNPFKEDSLPWAAWIIARLQGWCDMGKDTRPGYITIKEGLRVFEYQVAFYTSLKKDV
>CP023864.1|AUI56717.1|1160188_1160800_+|hypothetical-protein
MVVMPGAMTDLAHRVQKGPRPNPITNSEETTMDEQEVDEPVQYDTNNVDQEVHTQVEEQQPEEYAETIADVDEPAAAPTAPTSSFRRVEPKQEAVDRKDRTAPAAKKLPKAEGRQLAREYSLAKDSGEDSWQIFLDLARDYKARDSRLATVYIDSDLKGVLDRLKSATSVKLPSTALLSAIVARFVFEHEKDIKNAIFGESLL
>CP023864.1|AUI56276.1|1159204_1159867_+|ParA-family-protein
MKNKKIVFANQKGGVGKSTLCILFANYLAAKGRDVCIIDTDLQKTILMQRRKDKLIYEGEEEPYNVQDFDVTDVETMQSLVDSASQVEGYVLFDSPGNISEDGLAPLFVGADYIVCPYEYEDKALDSTGVFVQVLNVLREHNPQMSAKLFFVPNRIDPRIGTAEEQEMWRRTDEVFGNFGLVTPVVNSRATLKRTNTFELLGTQRDAVKKAFDYMLRRMK
>CP023864.1|AUI56275.1|1157926_1158613_+|hypothetical-protein
MKLGTFSVSSKAGEVLNWSMGLYLAFSGLSFIDNWTSAPNEGQGVITQAFATFQSSSMIQVIEAVALLATELTMLEVFRRCLSRNKHFTAQLAVIVVMVLTFLIAAASNLPMFLCTPEELSNGISGVALSKFSMFSNACGLVLFVTNLILCIQLMVKYAGRIRLYGASLIGCDVAISLANMVYGYIYNNVGGVTMDQITTYGTIVSILSFVLGLAPYCLLRRTMVAAD
>CP023864.1|AUI56274.1|1156150_1156336_-|hypothetical-protein
MRKCDKKVKKGQGKRRQSNKGNSNDGWEGEVKEWIKEDRVTERTVTMIVWGSKRQDKKKTE
>CP023864.1|AUI56273.1|1155393_1155597_-|hypothetical-protein
MDAQKSVLIDETETSIIYEIINKKSAKYILLSQSSQMNRIYRGLAQNPKGDRNHRDKGTVGGIKILE
>CP023864.1|AUI56281.1|1167134_1167605_+|DUF4065-domain-containing-protein
MEDVQQIASYISQRYEKEYGRQIDEMKLHKLLYLTQREAIIETGEPLFEDQFEAWKYGPVLYSVHKAFQTDKLHGEMLSDETIGKYKKVFDKVFSSYASKDSWSLSTLSHGEYSWRKAREGYDPDSACRTKIRVEDIRVDAQRIKQRRIMLNILGA
>CP023864.1|AUI56282.1|1167629_1168472_+|hypothetical-protein
MKITEEQRKVLDSFSCERLAEKLENMWIVEDFYNSRNPQLEQNLKDKAYEEDENNTTAYYVIKDEEGSVVFYFSLKCGMLYDKIVEADQYQQLQKICNLLIKKIMDKSISEDKKEGFKELLESFRSKKGLTRESLESVFSADEVTIDEIFKGNQRHVGKTYSGVEIVHFCINDGYREKWEALNMPQRLGSIIFWKFIIPQVKYLLEIVGCEYIFLFAADLSEDESLVNYYRELGFTDSLVHHVAIPLYDLACKFMYQETNQLIEKQKKFFEDFNPDFSEK
>CP023864.1|AUI56283.1|1170874_1171942_-|mobilization-protein
MIGKCKAIAHGSNALEYIFREGELGKTLLFHNLCGTMPKEIYEEMKMVSDYNTRCRNKFLRIEIGIAPQDEKRLSLVSVRNLASNFAIRMGLANHQWVAVTHKDTDNMHIHIIANRISLYGEVYDTTFMSNRAARVAEELSRKHGMTIAKEVKAKRLHQKPKANPTREQTKQQVQKICYALLDRYKGTGITGHSMFLYDLSKSGVTIERLKNKQGKIYGLKFAYDGQTFKASEIGREFGYHSLQKNFEISNKTEPKKATTMADELAKNKIQSHTGYQLVPPSRPYTSPANTNESSSIAQAVGNMANTAINAAEEIISGAGGLINPQTHGDDYAETAWQHRLRNQAKKKKKRGRGL
>CP023864.1|AUI56284.1|1171925_1172357_-|hypothetical-protein
MNRYNSKTARWQQQEKEELRMNKTEFIKVRCTLEEKQRIKSKAESTGRKFSDYCREILLNGEVTAVPKMTDNEREAIEVLRRTAYFFTHVSNLIKVKDDAWVLITQSLSYLAREAFKRFFNPKYRIEERAIKLLNLMENDREM
>CP023864.1|AUI56285.1|1172684_1173164_-|DUF3408-domain-containing-protein
MKKIKASREEIDQSIKEAFSMNRQESNERTDRKSLTYYLGDTEDKVEEQPQAKAPSKETDCQEVIASESAQHAENATVQRRISTKMRRGTLEAYKQTFLVPTKLNDRKAVYLSRATQERADFIVRRLGDKGANVSSFIENLVRTHLEEYGEDIEKWRRL
>CP023864.1|AUI56286.1|1173927_1174527_+|hypothetical-protein
MTTANSELASIGNDYNALLSKYKLFIMQWNELKQQPEIVEAIERIEKRKKQEAEERKRQEAECKRDEQTRQSRFQSVLIRFINEGHSSLGKFSQTERINFNDKEANAIYYGLIATAVNDRLSLNVSKNIEASVNKFLAGMTWNGCTEFRRECVSNWTKLFATKDVTYTKDAISNFLSFVDHMSCSCRHIRLAWRLKRMR
>CP023864.1|AUI56287.1|1174794_1175613_+|hypothetical-protein
MNNSEVRHITLPIWLDNLLFNKLSAIYSRKKKDLVVLDWGQEDILGYLGTYFPRSYSESYLIFSKYLQNNYIQYQDKEELSVFDFGGGTGGELVGFIIAVSEQLSSIKKIRIKALDGNAHALRNLEQILDVVSAHTEIKLDCQLMPVVIDDFYDLKIVTDVITQAYDFIISFKAICEFVTCQQFEERNPYEHIINVFSPKLTDCGVICLADITSYNEVSNDWLPKMLDKASAACQVEIINRNSGFNEEFHTTHSRCNNDLSKIAWRIYRIKN
>CP023864.1|AUI56288.1|1175627_1176740_+|hypothetical-protein
MKKDWMIKESELDDDQIKILMETLDKSCIVAGCAGSGKSVLALIKAQRIQKEYGTNYKIIVYTKALCKYMNSGKQELGLTNDFYYHMEWKYKRERRGRFMVYSKDENGNKIPYMPSADYIIVDEIQDFSDDEIREFLAATNKHFFFFGDTAQSIYEGLKKTVPLDRINALVPFNMKVKNWELYRNYRLPLPVAKVVQPIGVDLPPFIESTYKSKEIAVPRFIKYNNEENQIKAIHDIISRNNMTDVAILLPDNDYVKTVYNQLKSLGGNYELRYNDREDFRNSQDSLNFTSTNPKVMTYHSAKGLQFETVFLPYIENFSGQESDRKALYVAMTRTYRNLYVMYSSMLPSPLSNINSQLYKTTEIDEIEDY
>CP023864.1|AUI56289.1|1176742_1178983_+|hypothetical-protein
MKYYIPTSSLNFNNILSTESISPKAMYKKRGYGYSRWFTVEENNIEHTTLLFDTLCVFDRPISDIEDHAMLIEIISDDDFPKLPNGVYYTDKTIYLNPWQTRFIFFSDKVKRTVMSMSDSSLETKLVRLYQRKMVVLSDIKDRGYKIIKEDSIPLSNNMESNIEEDYIINKMKGLLYGYYIGANLSSSKEHILKLDSLREINNIFASIISGYDRIPSVTQKKRLDELFNYIDSQQPIFKDLEKELGSVQLASKALNVFKRYGYTFETVDRIMLLEALKKDTENNQALNWVNHEIAKANALFNTSKSLLNPDDGELIVSGKEKLISQKCISEDLMANLFIHWINIVLCSHSFNGKINSIKETLSDEITKDAKNVIGKDWDNSPIRAYLNQLRRHVRGEEFNQPWDNGVLSSIAAVLIKGDDWEQLLHFMQSKGMYDYRLAFAFYGVLNGFANMTRDFTDNLLNKDSGYLSMVYRDFYGQLFDKSIPEFGYISTMPEKNDNTGMLSSTFESSVNKGNNPIVDWRRDIKLYAETVIKRDKMKLFKSLDEALAQNGDNQDYFRFIKMLDNFDGWKPGKNRPCSAWKRMQEHFVPDYNERIGKSAKTENIGKLAKQQETSLFDGIEDDTLHYNNTIKQEKSFNPSNKTSNLFVDDENVTYFIGSQTYLPADVRATLCKKVLSFQKDYAPNGYYFGKKDSPRTNDNTIKHFINKCTYQKEHSSSPSWIPATSENKVLLDKLKNALYQRYANG
>CP023864.1|AUI56290.1|1178969_1180022_+|DUF1848-domain-containing-protein
MPTDKIKLILENSDIVEATAPYIISASRSTDIPAFYAKWFFNRLAKGYCTWYNPFNQQKMYISFKNCKVVVFWTKNPKSIIPYLHILDEMGIHYYFQVTLNDYVKEGFEPNVPFVEERVKTFIELSKMIGKEKVIWRFDPLIITPTIGPRDLLTRIWNVGNKLKGYTDKLVFSFVDIKAYRKVQNNLVKETISFTKEDVENTEANYAQRIEIVEGLAKIREAWHKDGWNIQMATCAEDIDLETYGIEHNRCIDGELMKRIFAGDKELVYYLHTLKWPEKDMFGEIPPIPEKLKKVKDTGQRKVCGCMVSKDIGMYNTCRHLCVYCYANTSKEVVLKNKDKHNDESESIIE

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Crispr_ID: CP023864_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_17

1316600-1316688

Orphan

Consensus_repeat	Method
ATAGGGGTAACCTCACATATTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_17

>merge|CP023864|17|1316600-1316688|CRISPRCasFinder
ATAGGGGTAACCTCACATATTACGCCCCTCCCTGCGGGGGAGGGGGTTGGGGGAGGGGCCACCTCCATAGGGGTAACCTCACATACTAC

>CP023864|17|14|1316600-1316688|CRISPRCasFinder
ATAGGGGTAACCTCACATATTAC	GCCCCTCCCTGCGGGGGAGGGGGTTGGGGGAGGGGCCACCTCC
ATAGGGGTAACCTCACATACTAC

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56369.1\|1311538_1315336_+\|alpha-xylosidase	unknown	unknown	gnl\|CDD\|269882
CP023864.1\|AUI56361.1\|1298978_1299722_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377964
CP023864.1\|AUI56360.1\|1298292_1298661_-\|TerB-family-tellurite-resistance-protein	unknown	unknown	gnl\|CDD\|143581
CP023864.1\|AUI56364.1\|1302964_1306351_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56371.1\|1318523_1321640_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
CP023864.1\|AUI56378.1\|1332999_1333236_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56373.1\|1323724_1324783_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372993
CP023864.1\|AUI56376.1\|1330276_1330597_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235401
CP023864.1\|AUI56365.1\|1306361_1307978_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56375.1\|1326824_1330016_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379166
CP023864.1\|AUI56366.1\|1307985_1308372_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56377.1\|1331641_1333003_+\|PAP2-family-protein	unknown	unknown	gnl\|CDD\|239488
CP023864.1\|AUI56367.1\|1308390_1309806_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56379.1\|1333462_1333945_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56362.1\|1299684_1300266_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|132992
CP023864.1\|AUI56374.1\|1324804_1326610_+\|chitobiase	unknown	unknown	gnl\|CDD\|271342
CP023864.1\|AUI56372.1\|1321670_1323701_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|369630
CP023864.1\|AUI56370.1\|1316996_1318487_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271323
CP023864.1\|AUI56363.1\|1300303_1302958_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
CP023864.1\|AUI56368.1\|1311189_1311405_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56369.1\|1311538_1315336_+\|alpha-xylosidase	gnl\|CDD\|269882	cd06596, GH31_CPE1046, Clostridium CPE1046-like. CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.	0
CP023864.1\|AUI56361.1\|1298978_1299722_-\|hypothetical-protein	gnl\|CDD\|377964	pfam08230, CW_7, CW_7 repeat. This domain was originally found in the C-terminal moiety of the Cpl-7 lysozyme encoded by the Streptococcus pneumoniae bacteriophage Cp-7. It is also found in the cell wall hydrolases of human and life-stock pathogens. CW_7 repeats make up a cell wall binding motif.	9.26727e-08
CP023864.1\|AUI56360.1\|1298292_1298661_-\|TerB-family-tellurite-resistance-protein	gnl\|CDD\|143581	cd07177, terB_like, tellurium resistance terB-like protein. This family consists of tellurium resistance terB proteins, N-terminal domain of heat shock DnaJ-like proteins, N-terminal domain of Mo-dependent nitrogenase-like proteins, C-terminal domain of ABC transporter ATP-binding proteins, C-terminal domain of serine/threonine protein kinase, and many hypothetical bacterial proteins. The function of this family is unknown.	0.000298683
CP023864.1\|AUI56373.1\|1323724_1324783_+\|hypothetical-protein	gnl\|CDD\|372993	pfam14274, DUF4361, Domain of unknown function (DUF4361).	3.68678e-16
CP023864.1\|AUI56376.1\|1330276_1330597_-\|hypothetical-protein	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	8.98381e-05
CP023864.1\|AUI56371.1\|1318523_1321640_+\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
CP023864.1\|AUI56377.1\|1331641_1333003_+\|PAP2-family-protein	gnl\|CDD\|239488	cd03394, PAP2_like_5, PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	1.79532e-31
CP023864.1\|AUI56362.1\|1299684_1300266_-\|hypothetical-protein	gnl\|CDD\|132992	cd06974, TerD_like, Uncharacterized proteins involved in stress response, similar to tellurium resistance terD. Tellurium resistance terD like proteins. This family is composed of uncharacterized proteins involved in stress response, such as the tellurium resistance proteins, chemical-damaging agent resistance proteins, and general stress proteins from a variety of organisms. The tellurium resistance proteins are homologous terA,-D,-E,-F,-Z,-X gene products, which confer tellurium resistance mediated by plasmids. Currently, the biochemical mechanism of tellurium resistance remains unknown. The family also contains several ter gene homologues, YceC, YceD, YceE, for which there is no clear evidence for any involvement in the tellurium resistance. A putative cAMP-binding protin CABP1 shows a significant similarity to the terD protein and is also included in this family.	1.24787e-05
CP023864.1\|AUI56374.1\|1324804_1326610_+\|chitobiase	gnl\|CDD\|271342	cd14948, BACON, Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain. The BACON domain is found in diverse domain architectures and accociated with a wide variety of domains, including carbohydrate-active enzymes and proteases. It was named for its suggested function of carbohydrate binding; the latter was inferred from domain architectures, sequence conservation, and phyletic distribution. However, recent experimental data suggest that its primary function in Bacteroides ovatus endo-xyloglucanase BoGH5A is to distance the catalytic module from the cell surface and confer additional mobility to the catalytic domain for attack of the polysaccharide. No evidence for a direct role in carbohydrate binding could be found in that case. The large majority of BACON domains are found in Bacteroidetes.	2.6705e-13
CP023864.1\|AUI56372.1\|1321670_1323701_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|369630	pfam07980, SusD_RagB, SusD family. This domain is found in bacterial cell surface proteins such SusD and SusD-like proteins, as as well RagB, outer membrane surface receptor antigen. Bacteroidetes, one of the two dominant bacterial phyla in the human gut, are Gram-negative saccharolytic microorganisms that utilize a diverse array of glycans. Hence, they express starch-utilization system (Sus) for glycan uptake. SusD has 551 amino acids, and is almost entirely alpha-helical, with 22 alpha-helices, eight of which form 4 tetra-trico peptide repeats (TPRs: helix-turn-helix motifs involved in protein-protein interactions). The four TPRs pack together to create a right-handed super-helix. This is predicted to mediate the formation of SusD and SusC porin complex at the cell surface. The interaction between SusC and TPR1/TPR2 region of SusD is predicted to be of functional importance since it allows SusD to be in position for oligosaccharide capture from other Sus lipoproteins and delivery of these glycans to the SusC porin. The non-TPR containing portion of SusD is where starch binding occurs. The binding site is a shallow surface cavity located on top of TPR1. SusD homologs such as SusD-like proteins have a critical role in carbohydrate acquisition. Both SusD and its homologs, contain about 15-20 residues at the N-terminus that might be a flexible linker region, anchoring the protein to the membrane and the glycan-binding domain. Other homologs to SusD have been examined in Porphyromonas gingivalis such as RagB, an immunodominant outer-membrane surface receptor antigen. Structural characterization of RagB shows substantial similarity with Bacteroides thetaiotaomicron SusD (i.e alpha-helices and TPR regions). Based on this structural similarity, functional studies suggest that, RagB binding of glycans occurs at pockets on the molecular surface that are distinct from those of SusD.	8.44286e-43
CP023864.1\|AUI56370.1\|1316996_1318487_+\|hypothetical-protein	gnl\|CDD\|271323	cd14953, NHL_like_1, Uncharacterized NHL-repeat domain in bacterial proteins. This bacterial family of NHL-repeat domains is found in a variety of domain architectures. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	1.23312e-18
CP023864.1\|AUI56363.1\|1300303_1302958_-\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	1.43021e-06
CP023864.1\|AUI56375.1\|1326824_1330016_+\|hypothetical-protein	gnl\|CDD\|379166	pfam13402, Peptidase_M60, Peptidase M60, enhancin and enhancin-like. This family of peptidases contains a zinc metallopeptidase motif (HEXXHX(8,28)E) and possesses mucinase activity. It includes the viral enhancins as well as enhancin-like peptidases from bacterial species. Enhancins are a class of metalloproteases found in some baculoviruses that enhance viral infection by degrading the peritrophic membrane (PM) of the insect midgut. Bacterial enhancins are found to be cytotoxic when compared to viral enhancin, however, suggesting that the bacterial enhancins do not enhance infection in the same way as viral enhancin. Bacterial enhancins may have evolved a distinct biochemical function. These bacterial domains are peptidases targetting host glycoproteins and thus probably play an important role in successful colonisation of both vertebrate mucosal surfaces and the invertebrate digestive tract by both mutualistic and pathogenic microbes. This family has been augmented by a merge with the sequences in the Enhancin Pfam family.	2.20899e-33

>CP023864.1|AUI56369.1|1311538_1315336_+|alpha-xylosidase
MKKKRAKMLLAALLLAVGETAFADGTVVSGIRQINPTTVEITYSDGGVMTVDFYGKNVFRLFRDPKGGIVRDPSSTPPAQILVDNPRKDVGQLSINASDADVDVSTAELRVRFDRSTGLMTVTDLRNGKEVIKEVKGVDFQKNRTTVTLRNAVGEFFYGGGVQNGRFSHRGKRIEIVNTNSWTDGGVASPAPFYWSTGGYAAMPYTFAPGVYDFGSTDKNTVTISHDMPYLDLFLMVDTTPVDLLRDYYQLTGNPVLLPKFAFYEGHLNAYNRDYWKETTEEGKGIRFEDGKRYVESQKDNGGIKESLNGEKQNYQFSARAVIDRYKKDDMPLGWILPNDGYGAGYGQTTTLDGNIANLKSLGDYARKNGVEIGLWTQSNLHPVDSISALLQRDIVKEVRDAGVRVLKTDVAWVGAGYSFGLNGIADVAHIMPYYGSDARPFIITLDGWAGTQRYGGVWSGDQTGGEWEYIRFHIPTYIGSGLSGMGNITSDMDGIFGGKNLSVNIRDFQWKTFTPMQLNMDGWGSNPKYPQALGEPATSINRSYLKLKSMLLPYTYSCAHEAVTGKPLMRAMFLDDSNDYTHGSATRYQYMYGPSFLVAPVYQNTSADKEGNDVRNGIYLPKGTWYDYFTGATYEGGCILNDYFAPIWKLPVLVKSGAIIPMVNPNNNPSEVDKSRRIFELYPDGKTSFTLYDDDGTTQKYLNGEGATTLITSDLNDKKVLTVSIDKTVGTFDGMVKNQSTTFYLNTNAKPKKVTAIVGGKKIRLTEAEQGDNTWQYVQASNINRFATAGSEMERLLVTKNSQIIVRLASCDITKEAVTLRVDGFEQLRKSNETLRKKGVLTSPNLLEADVQSYSVTPKWAPVQNADYYEIAFNGQTYTTIRHNSLLFDDLQPATDYDFKVRAVNSEGASEWTPLHVKTAVNPLEYAIKGLTATSTARDMEGFEIHRLVDFSTTGDIWHTYYYTKAVPFDFTVDLHSTNTLDKLQYVPRANGGNGTITKCDIAVSKDGRNWTEIGPQQWARDGRTKEVTLSTHPVARYVKVSVKEAVGNFGSGREFYVFKVPGTKTILPGDINLDGKVDENDFTSYMNYTGLKKGDADFDGYISGGDINGNGLIDAYDISNVAMHLEDGWNDDDVAPVGGKVYYEYNRKSYAAGDDVIIKVRGKGLKSVNAFNLVFPYSPKEMKFVKVETDPSMTMRNLTYDRRHSDGSQVLYPTFVNVGDHPTLNGDADLLVIRMKALKPFTVKNTTAKGLLVDKEMREVEIK
>CP023864.1|AUI56368.1|1311189_1311405_+|hypothetical-protein
MAKIVGKSGADSRKDWGSRHDGAEQIAGKAVADGKEGGRGRSERWGKNGEDNREQEGGGGRKKLISMKIIG
>CP023864.1|AUI56367.1|1308390_1309806_-|hypothetical-protein
MINSCKNQLTNRNQLKSKLQKTTQALTWATLTIFGFIGLSACSSKIATVSDTKYIPEFQQTYFSKGVDEISPDKLSLYVDYSKCISLGQNSPFFQALVPSWTDATRKYYSIKGNSIEQHQPDSTFVLLRNIEETNYADLKTAAERMANENNESVLLTDGEYFQPSIAKGNINNPYMAGALKSWLKKGHDIYILSEPYTEPYNGQTFNKKRFYILFTDCRLKGNIYERIMQTINLKQFPQVELFHLSADHPQLLSKNAQTTEPNQQLNAKVSSNENGYEVQDWEIDWENGIEPLIVNAVNPNTGQPLPDGEAFISGWKLDRESFGGYRITGVSAKVYNINQEYSDFYNAKDAKQKPEAKIDPAECEYFVKVDPKEFNEHGKIDLHFDTQNYNPDPVLNGSPFNYFKIDICVSKVEPLFEKYKHIFTFDSIDMPGNKNVSVAASVEQCLTDPDIKAMISTCPIYTIYVKTNER
>CP023864.1|AUI56366.1|1307985_1308372_-|hypothetical-protein
MTPITNISQLNQLMNSTMVYAVVVGFVALLLALLLSNMFPWEGGNDRSYIKRRIAFIVIAIIAVLGFWLYNDLVVMTHIHNMGFQNMFKACNLKCMGINLGVYLVAGVALMFTFRHSKFGSILGKEKK
>CP023864.1|AUI56365.1|1306361_1307978_-|hypothetical-protein
MARQFFVLGIGGTGMRCIESLIHLCAMGMFDDTDIHLLALDTDKNNGNFSRLKEVKDAYCNTKGQDRANRVALKNSFFSANINYYEFSPNYEQKSTFKAVFNYGDTQYNHREETDLADLVLSENVEDFNLRHGYRAQTHLGSMMMYHSILEAAKSPANNELKLFLSELIRASQNGQPRVFILGSVFGGTGASSIPIIPQAISKAAEIMSNGAANVLRSAYFGSTLLTAYFSFRAPSGGELNNQKIIATSDKFALNSQVAMMFYDDDATVKSTYQKFYMLGTDNLSWNPMQRKEDTITQTITGGEQQKNDSHYIELLAACAALDFYNTDESQLQQNKDLHKTDYEYRAVSESGKLDFEDFVGKERAKEFAQKFGMLIAFSLFCNGKDDFVESVRSGGQKEIQEFVEMDITQAKSLREYFNLFFVKQVGDNLQEGWLRQIHRSAGGQDAFLFNANLFSPMTFKELMKMDWNKCIYRNEGIGKDNTYSKSGVLGFGSLFDPFKKQFIQTRDTTKEWQNLTNKGEQLYKLIFDTLAKLYKFN
>CP023864.1|AUI56364.1|1302964_1306351_-|hypothetical-protein
MSKALLIKSYTNLTTGTQGQWNELNMASSYIQGIETGKILEGLTAEKLAALISGVPTPWARAKLFKFALQTIASPDPNIKASGLQQFYDMLYGEWKGLLATIALFPDRIRFSNPIKMDVKGDEYDIAAAFGRMLFEDKDVWGNQDKLAKNPDEQPFIHLIYYRDHLVGGTSPMTGVFTGVNYANLGDDASDIEWYRDGKFEDPTRYLSPDQLQKVYLFIKNMNSNLEEFEKKINSQRGGKQPISIDGFKQMSRKWEQELLYCGGGNLRDKGPIAKYGNLECPFSLLLKSDVPVYLKPDYTFTYTNNGDYKLIGDIQDLLSDDKFVIGWAEDADTRPKLSDAPVFYLRVKELKDGSMSYFTLPLSERGIDIFKNNLRGLLGYNESGNTSLTGVITDAGQLAVTLIVEIDGQKVTLNTREYEIDWITDLGKVIMWPDFVSERWDKYYLYSEFTADAQEQFQPIFKWQGEFVRTIDEKFWTADYEPSADEDIQIKVKKLITYPAGQGEELPKYNIICANKPLAGLSAFVKDTGRDVHAGYLIFRQDVIVDKSTIDLNGTAVVGIDFGSNNTCVYYNAGDRGANPVEFKNYRTVLVGKENSDTRSIAENNELLFFTNYVSENGQVKSWLHEHDTRYNCYNESEEIAGGVPVNRPNIFVKEMNQYEIKTQAGTLHYNMKWLDNDKGLQKKRAFLKSIWLQTCAYLYKEERIRPEELRWSYPGSMMEADSAELEKIFEELCRMTPITGGRQPQLGRELTTEAEAVCSFALSRDFGLNKDNMFLGIDVGGSTSDILLLAKDQNNGNKSSLYRESSVRIAAGVFFNAVIKSESFRQALVSFHEGRKTKVFVANIKEVLTQPSKAPYYLNSIFDQLKSENDYEEFYSSINNNARFVFTIPAYVTGLLLFYSGMLIGKTIKTEKMDHIRRVDVLSFGKGGRLFHWLRSSATQRVTNEYYEKCLNAGVNLVTEKNLEVKYRDEIEINNKAEVAMGLVDAKELIKKQQEVDSDICGETGVKYIMNDGTPKELQTEDELTGEYFANEMNKFDFSGVTNFEKFMEIFIDFVSQKTRLYPQADNLREELADLPNRITSYICNNDDEYRKARRTQGDDFTYHQPIIIAEGACFLDTLIKKAFNQ
>CP023864.1|AUI56363.1|1300303_1302958_-|hypothetical-protein
MKVLTLYIDKWYIIGAVCIDGVPRPITPPNGEDRFWLYFYEDRVNDTIVYGKDNKQHYHNNELQYYGNVFDLIPDTTASFIRYGRKQEMYKIFKASGILDELRDAVDDNGGEVETYISFSKDISDAARLVFLKDVLEGNKFTVKESVARIGQLALELAFKKGQYAEDGFYVLLNACNENLTYSVYERTEGILLRKAEDSLVGMGTDLRGRALLESVIKSINQRQHFLDTEEDLEREYLCLNQYVDQWIDKLENAGPYRPVHINNIKFSQLPNTYDAVVLKDDIDKHTRSIVDDIIREITNFINKINIPAGKLKGVVFLGNTFTNEQFIRAIKERYALPDKNYIFFKDSELPHIVAVYSAIDCDQFSEATRVAIANGETELERRRLAQEEEARRVEAERQRAEQEEKDRAAHESENKYKEAMANIYDYEKKQDYAQMLDWADIALQHNPDDQEAKQKKAEATRLMSEKKVKEEQYKSIIQRAQKSFEAMQWQEALSQSDAALNLMPNSKEAERIHQAAREKIDSLTLIEKYLTRADMFLAQQYYKEALDELRKVQAIDNENKEAQGRIQKIEQEQEAHEQRVTDLIKQYQMAEEAKDFDTAISLCNELIDTDTVYQRKWTERVERLKAAKLDFDKEEERWQKLKRQIDSALFDEDWDKVVTYGHEALRMREDENLRKNVARAEEKLATLQAEKRYKDAVHEVKDFIVDKNWDEAKDLLTELQREYPEHRNDLKLLFKQIFDAETAFQSQTVSESRTQPVRTVSNRNSQHQEDDFFGTSGKTTTTSSGYSNTVSNAEQAYAESSSTITKEETQGDDFFETGGKATTTTSGSTHSTAISDPQRTTSTGSSTKKSTDEDDFFDMKKPPVKGKTNRGKTARGTDNDFDF
>CP023864.1|AUI56362.1|1299684_1300266_-|hypothetical-protein
MAEVTLKKKITLRKKQEECAFTFSGKLKVKLLWNSPTDLDLCIFFKKKDGEVGGVFSNEYRGRKSDLGALDKFPFMLHLGDNKEPSEGGEETEQINVASLDEIESAYVCIINYNAAIEQLDITYADEGGRVELQSDSGDYLEVLADAKETGHVYCVCSIKNNGGSYALKNESRVMDLGTAFDEIPGFAIICND
>CP023864.1|AUI56361.1|1298978_1299722_-|hypothetical-protein
MRYQASQLYATTNMVEIKRKVTLRTKTSQPEEKPTTEVTPEVQSSASQQEPTPTPPPPTEPTTNAEGSKRGGNWKQWLAAFVLAALLRGGYYLYNNSQGNDVQDTTTVAKTDSTDTQKDSTQTAQADSTTKVKPEADGNNVATETANETAAEDNSVSETTTPSNNTSANNTTANTTTDQQTASTDNLGTSSNTEPTAAEPANSVQETAKDVIRGTYGNGVTRRHKLGSRYEEVQKRVNEMYRQGLIR
>CP023864.1|AUI56360.1|1298292_1298661_-|TerB-family-tellurite-resistance-protein
MENLDELKKSLLADGKIDKEEVEQLRKVLYADGVIDAEEVAFLFELNDAVSGENNAPEWKEFFVEAISDNILADGEIDEEEVKMLSEKIGADGQVDETEKALLLNLKAKAKNFPAVLDSLLK
>CP023864.1|AUI56370.1|1316996_1318487_+|hypothetical-protein
MKRLFKSYLWMVLLGSLAWASCSDKEVGGSVGGSFDPSQPIVINDFYPDSGGIATPMIITGKNFGTDTTGLSLWYVDEDGGRHRGGLVSSNGEKLYCYVPAGLTYKRNIKLEVTRANGNDTIKGEGTRDFKYITQTAVTTIVGTQTSDAHATKADKLLTSNLSAPAYLCIDNDNNIFVVQHTFNDGLNANGTNCDIQCRNEKNENIGGMVLKANLKKDEVSILQVNSDKINAPAYSTLDGYEGVYVPDDSGRKYYSLLKDQGYAVHKQQFINPNGYSDLDNSNWKYCFVINKNDQMIYSVMFKGQLIRINPKTRKAELLLKRVGKDGPKGSGGSDAFCTFSPTQPNRLFISFTDAHQIWYVDVDQLSDKDSLTYQGEPYAGISSFGTVNVTEGKGWEDGALKNAKFCYPRQMTFTKDGKLYIADSGNQCIRMIDTTQGKNARVTTPIGVPQSAGFQDGGVELAKFNWPTGVAVSADGSTVYVADSKNQVIRELSIK
>CP023864.1|AUI56371.1|1318523_1321640_+|TonB-dependent-receptor
MRRTLYVLCLMLALLTYGVQAYSQDNSTAKQFSVAGVVYDDTGEPCIGATVRVKNEPGTGTITDLDGKFAIKVKPGATLQFEYVGMETVQRTILKDEPSLSVKFKVAKTNAIDEVVVTGLVSQKKVSVVGAVSTINMEELRTPGTSLVNMIGGRMPGVITMQLSGEPGQNLSNFWVRGVSTFGAGASALVLIDGIEGSLNDIDVDDVESISILKDAAATAVYGVRGANGVVLVTTKRGSKEKIQVTARATVKLSHLNKLPEYLSSYDYARLANEARAMSGEADIYTPIQLDIIKNNLDPELYPNVNWIDEIIKRNSLQENYYASARGGGDVAQYFVSVGYRHEGAAYRQKENQFHQPLSYDQLTYRANINMNLTKRSELYFGVDGSISNYTTPGGKNTNQVWEDVLQLNPLMFPVTYADGTLPTYGQNDLISPFAALNYQGYNSADNTRNMITLKFTHRFGGILKGLVGSVQAVNDRTSGFSERRFVRPDYYRATGRTSTGDLIKTLRSKQQDMFYSSDNESWRKYYMEAKLDYNTSIGAHNLGALLFYYMEDTKGSEWGNGDALGIAAIPKRRQNVSGRLSWGYNSTYFVDANFGYTGSDIFPKGERFGFFPSIAVGWAPTSYKWVQQHLPFVNFFKIRGSYGLAGNDQIADKDSRFPYLTIINNHAATTWGYNGQGIVEKQTGADNLKWEVAKKLNVGIDANFFNDAIKLTVDFFRDTRDHIFQNRVTLPEYAGMVTYPKSNVGRMHSFGSDGNISYFHKISKDMNYTVRANYTWSQNIVDYFEENKLAYDYQSVTGMPYSVLRGYISEGLFKNEDDIRQSPDQTAAFGVVRPGDIKYRDVNGDGVINSDDRVPLSYGNNVPRVMFGIGGEFNYKDFTVSLLFKGNTGVNYYRVGMGHDAGWIPFYNGEMGNVLKMVNNPKNRWIPSWYSGDPSTENPNAMFPRLSYGSNTNNSQLSTFWKKNGSFLRFQELNFRYIFRHRKWLRAAGLSSLECDFVINNLFTIDSAKYFDPEQAWYNGAAYPIPTTYSLQMYFRF
>CP023864.1|AUI56372.1|1321670_1323701_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKKHILALGTVAALFAGMTFTSCNFLDQDDNFNAIFKEDSVFHSAQNANGYLFATPTMFPSAGNIWGNSWNPGETASDEICVRWQTNEFWGAKFTVGNVNAENVPNWGQWYQMYKIIRRCNLMLEKVDKIGDMSNNDKADYKAMVHFIRGYAYYVLLQNWGPCLIVGDEVVSTSEKADYYDRERATMDESIDYICNEFAQSLPGLKRPSEQSTAYFGRPTKGTALALIARLRLLQASPTFNGGTYAKRCFGEWKRKSDGKYYVNQTYDAKRWAVAAAAAKQVIDLNYYTLYTVDADKDNPYPLDASVPTAKFPDGAGGIDPYHSFADMFNGEGTAKVNRELIWADEYSGPVMTYSRHSFPVNYGGWGGMSVPQRVIDCFLMKDGKKPAESPLYEADLTKHINQKKSIGDCDMANGTPLAYVNRSARFYASIGFPGRIWKMNSTTDGSYNNQTFWYSIDDSKAGKNAAGNNPNDYCISGYVPFKYIHPDDSWHGKDGASVIPKPFPIIRYAEILLSFCEADNHVQGSENVKTWDANGRLVDVAVTRDEAAMARYFNMIRYRVGLPGVEAATLSSENAFDEVIKNERQVELFNEGHRYFDTRRWGTYFTEDANSSNWRGLDVYSEKKGNNDGPFFNLVTINEQNIRDRKALPRMVFLPLIHRELVKSPKMDQNPGWDR
>CP023864.1|AUI56373.1|1323724_1324783_+|hypothetical-protein
MKKYKYILGCALAAVALSSCNNYDFEQNFYPHKVGLMAGSNRIYDRTTVELSAVEQGTASVKLVANLSGSQLADRDYHVSIAHDDSLFNAYNKSNFDIDSTKFARLLPADCYEDPQMAGTIPAGSNKCYFDIKLKNLGTLSPDSVYFLDYKIVSHDASAIATDNNKLGVQLNHVLVKILWKNNYGSTAENWNYQLVSSQVTNVETKSTTRPTNTVRAFPVAANAVRFLAGDEKWDNYEKALHDINVKSIVATIGSKTVTNPSAYNVTLKPFKQDSLEVEMLTPVGEYNNTFLLNELGGSASTNPTYFKEFRLHYRYRVMKNAKQSDGTWKVGPWKEVLAKMRYQYNPRADKL
>CP023864.1|AUI56374.1|1324804_1326610_+|chitobiase
MKLKINFLFILSVLFVGTLGLASCAADYDTDFTSKELEVPHSSQRMIAFNKEGGEQQIVVETNVALEDWKAESNAEWLTVTKNPDGKGVTVKAPAYDGFKAREAKVTISHGERASYEIKVSQMGYESVLRIPEQNPFFNREGTFYSLLESKVTSIDVPVETNLHLDHIIVPDTVSFVRLDTTKTVKENGIVKLHFDMDANTTAETRYCTVRLKSSDNWDASIEYVIEQSAKGYKVRPIYPMETKEAAVEMVDLGRTYRVPFQRSTADGNYEIIIPEEAKSWLSSPKKYISGAEVDFTATLNSTDNARSCDVVCKPSNSSAQPFTIHVTQQPFQDIVPTGVNDVNVTPGKGQFTVTWKAPDEVNYEKVIVRAKSNMPGVPESVKEVAANETSCVLDNVFKFAGDYTITVTTQGLRGKNTHDPATATAQANEWSESVEIPLTAAMVSSNSMQPGHEVGAAVDGNKTTYFQTKSNGNTSDPRPYIDITLNEGINGTFYLGFDEYKVSSNDRNPKRANIYASSDVITAATPVSTQTNYRSANAVSEPLAYTKTNGATITHIRFEPTQRKNGSNINNGGGSSYWYLAELHLYVYHDEAWKKEQLGL
>CP023864.1|AUI56375.1|1326824_1330016_+|hypothetical-protein
MLFERFLRKKTLMAALALTAAVPSVAKASMLSAAPTADGENQKLKPGVYYIVNDKRQKGTDLHVFVDGKGTLHGQQYSSPSTDFSDLFLLHAKDGRYTIQSLKNAKYVQSVGQNNEVYKTADDAYKFRIEYQTESSGTGKSYFNIYNSNAEAWCWHLDAQKDIVRWYPLRDNGITALGPSEFRFDPVKTLTNEQVLARLAQLTKVVDPTKDLTKYYQIVSDTYGRAMREDFIVGELSTSGFNSSDYSYYWKLERLANGRYVFQNAVTGKYIVPQNGQTSRSYTTAEGKGTGFDLQRNTDDPYVLAFEMVDANNVGIHCAESQGYHPVGWYTHNEANKWVFKEVTLDPAKLKDQQEAYKTRVDLTKNVDVYAEKVAKYFTNSAATEVTAATKAMTDEALKAQMTTEGVPQGLQEVVLKIKNQSWTVYPSGRNWEKLFRIADYKVYSENNYGAWARSMGIGYDYGSMTNPTGITARDGEDLFVFLGDDIPQNATVQIELVPLGTRSAGKYYNLKKGLNIILNQGENNVFVNYIGRTFNNGKYLKDYKPMNIHIEGGKVNGYFDLTKGNTNEDWKTMQSDGLVWAKAFNMKGELIVMNMPGDDCKRYTPVHMKELVEIWNSIVQREDDLMGFRAAKRDKCNNVLNATAVDHGYMYATTGGTYYNYNTLADVLNYDKVKWGNGTLWGPAHEFGHNHQQLFNTAGMTEISVNMYSNMIMFTSGRVTSRSENCSYIDVDGKKYDGVCESAVSTYADRFANKKKWFEYGTWGTTQMYYKLYMMFHATGLDDQFWHNCLDYLRTHRLEGQGTANCQGQNDYLLFAKACSFAAKQDLSSFFEAWGHFYDVNGSVIGDYSNTTMYTTRAQWIEAKKFMQKFPKGPANNMIFIDDHIRPTPAIYPNAAPGTMRQDFNGAVRIGSMGDFGSWDQFKKDSLGTGWAVVKEEKTVNGRRTYTMEAKNSHVVGFKIYDSKGNLLYFANTKTFTIPKKVMEAAGNNIQVKVCGSDGSEVDPGKEPTGIKTFTSPSNGGKVDVYSIYGALLRSKVNPETALEGLPNGIYIVGGKKVVVGK
>CP023864.1|AUI56376.1|1330276_1330597_-|hypothetical-protein
MPRRTRPKETRNGTEETEEQPKGNEQAERRKRKSGTKETGKRAEKNKSGVRKKGSSGPKETKKRNKGNRKTDRKKRRNGTKGTGKRTKRNKQAKRREQEGGPKETG
>CP023864.1|AUI56377.1|1331641_1333003_+|PAP2-family-protein
MFDVLSLAFCAPCPKLKVLRTTLVILSFVSLSHPAEASVALADSLRHMPSIAVDDSLGVTTDTCAVADTVTTVRQACEKARYKNDTRLDRVVYTCAPLILNGLIMRSESKRFRGLRNDYIPHFDRRLDNYTQYLPAAVMLGLKLGGVKGRSSWGRMLASHAMSVALMAGIVNALKYSAQVERPDGTDLRSFPSGHTATAFMTATMLNKEYGYRSPWIGIGAYSVAAATGLMRMANNKHWLSDVMTGAGVGIVATEMGYYLTDLIFKQRGLNKPTTEETFEEKYHPSFIGLNFLINEPLGKYPDGKGSHVKVSRGCTSAVEGAYFFNPYVGVGGRFSVTRTSVIVDGVKAEDNVFDTWKVGGGAYFSYPLTSRWLLGSKLLASSVFYPNIQLTDELIDSRHGMGLGTGLSLMFRARQHYSVRFLVDYNLLPYRALGKHTCFHSLELGSSFVVSF
>CP023864.1|AUI56378.1|1332999_1333236_-|hypothetical-protein
MGEGIRRAGGGEEGKLGRKTGAAEVEAYEALPRRTGTAGDGQGTVGDGGKTGWERRQGQAGTRAGTTGDVLRPLSAVP
>CP023864.1|AUI56379.1|1333462_1333945_+|hypothetical-protein
MIRKLYLAISLALCLAVAPQALYAQKGKAKTAVCKLNETQKEKQLFAYGFYKTYMNSLLYTQLGDLSSVIAEKFVSPSVMKKSVDMDGDVLIDAQACDEENIRTLKVVPLNNDWLCVSYLWITPYKDVGTKRKVVYIKVKEQGNSFVIEDATTKKPDLRK

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Crispr_ID: CP023864_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_18

1347653-1347755

Orphan

Consensus_repeat	Method
AAGGGAAGGGGAGTGATCACCGAGATACCCCTATAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_18

>merge|CP023864|18|1347653-1347755|CRISPRCasFinder
AAGGGAAGGGGAGTGATCACCGAGATACCCCTATAGGTTAGAGGCCCCTCCCCCGTCCCCTCCCCCAAAGGGAAGGGGAGTAATCACCGAGATACCCCTATAG

>CP023864|18|15|1347653-1347755|CRISPRCasFinder
AAGGGAAGGGGAGTGATCACCGAGATACCCCTATAG	GTTAGAGGCCCCTCCCCCGTCCCCTCCCCCA
AAGGGAAGGGGAGTAATCACCGAGATACCCCTATAG

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56394.1\|1360102_1360360_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56724.1\|1360519_1361851_-\|DNA-recombination-protein-RmuC	unknown	unknown	gnl\|CDD\|376878
CP023864.1\|AUI56384.1\|1343728_1344040_+\|T9SS-C-terminal-target-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
CP023864.1\|AUI56396.1\|1364620_1365061_-\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
CP023864.1\|AUI56380.1\|1333997_1334756_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56388.1\|1345692_1347210_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224563
CP023864.1\|AUI56382.1\|1335914_1337747_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350610
CP023864.1\|AUI56387.1\|1345115_1345550_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56389.1\|1348746_1351272_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238657
CP023864.1\|AUI56395.1\|1362055_1364536_-\|bifunctional-UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine-ligase/alanine-racemase	unknown	unknown	gnl\|CDD\|237026
CP023864.1\|AUI56383.1\|1338453_1341855_-\|glycosyl-transferase-family-2	unknown	unknown	gnl\|CDD\|200584
CP023864.1\|AUI56392.1\|1358177_1358492_-\|transcriptional-regulator	unknown	unknown	unknown
CP023864.1\|AUI56723.1\|1359169_1359538_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
CP023864.1\|AUI56393.1\|1358485_1358938_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380390
CP023864.1\|AUI56391.1\|1353990_1358022_+\|beta-galactosidase	unknown	unknown	gnl\|CDD\|236673
CP023864.1\|AUI56385.1\|1344086_1344635_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
CP023864.1\|AUI56386.1\|1344703_1345099_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56381.1\|1335126_1335693_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56379.1\|1333462_1333945_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56390.1\|1351281_1352376_+\|DUF4249-domain-containing-protein	unknown	unknown	gnl\|CDD\|379442

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56724.1\|1360519_1361851_-\|DNA-recombination-protein-RmuC	gnl\|CDD\|376878	pfam02646, RmuC, RmuC family. This family contains several bacterial RmuC DNA recombination proteins. The function of the RMUC protein is unknown but it is suspected that it is either a structural protein that protects DNA against nuclease action, or is itself involved in DNA cleavage at the regions of DNA secondary structures.	4.86297e-95
CP023864.1\|AUI56384.1\|1343728_1344040_+\|T9SS-C-terminal-target-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	0.00121481
CP023864.1\|AUI56388.1\|1345692_1347210_+\|hypothetical-protein	gnl\|CDD\|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	1.15452e-66
CP023864.1\|AUI56382.1\|1335914_1337747_+\|hypothetical-protein	gnl\|CDD\|350610	cd14728, Ere-like, Erythromycin esterase and succinoglycan biosynthesis related proteins. This group contains erythromycin esterase, which shares conserved active site residues of the Tiki/TraB family. Erythromycin esterases (EreA and EreB) disrupt erythromycin via the hydrolysis of the macrolactone ring. A critical catalytic histidine acts as a general base in the activation of a water molecule. Macrolides act by inhibiting bacterial protein synthesis by binding at the exit tunnel of ribosomal subunit 50s, blocking the translation of the polypeptide. Erythromycin esterase, typically found in integrons and transposons, confers antibiotic resistance through the disruption of the drug ring structure. EreB substrate profile is substantially broader than that for EreA, being able to also metabolize semisynthetic derivatives such as azalide azithromycin.	8.83868e-44
CP023864.1\|AUI56723.1\|1359169_1359538_+\|transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	8.03133e-43
CP023864.1\|AUI56389.1\|1348746_1351272_+\|hypothetical-protein	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.44779e-22
CP023864.1\|AUI56395.1\|1362055_1364536_-\|bifunctional-UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine-ligase/alanine-racemase	gnl\|CDD\|237026	PRK11930, PRK11930, putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Provisional.	0
CP023864.1\|AUI56383.1\|1338453_1341855_-\|glycosyl-transferase-family-2	gnl\|CDD\|200584	cd10962, CE4_GT2-like, Catalytic NodB homology domain of uncharacterized bacterial glycosyl transferase, group 2-like family proteins. This family includes many uncharacterized bacterial proteins containing an N-terminal GH18 (glycosyl hydrolase, family 18) domain, a middle NodB-like homology domain, and a C-terminal GT2-like (glycosyl transferase group 2) domain. Although their biological function is unknown, members in this family contain a middle NodB homology domain that is similar to the catalytic domain of Streptococcus pneumoniae polysaccharide deacetylase PgdA (SpPgdA), an extracellular metal-dependent polysaccharide deacetylase with de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. Like SpPgdA, this family is a member of the carbohydrate esterase 4 (CE4) superfamily. The presence of three domains suggests that members of this family may be multifunctional.	2.44467e-93
CP023864.1\|AUI56393.1\|1358485_1358938_-\|cupin-domain-containing-protein	gnl\|CDD\|380390	cd06985, cupin_BF4112, Bacteroides fragilis BF4112 and related proteins, cupin domain. This family includes archaeal and bacterial proteins homologous to BF4112, a Bacteroides fragilis protein of unknown function. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	8.03521e-51
CP023864.1\|AUI56391.1\|1353990_1358022_+\|beta-galactosidase	gnl\|CDD\|236673	PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed.	0
CP023864.1\|AUI56396.1\|1364620_1365061_-\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	6.51234e-17
CP023864.1\|AUI56385.1\|1344086_1344635_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	8.77923e-35
CP023864.1\|AUI56390.1\|1351281_1352376_+\|DUF4249-domain-containing-protein	gnl\|CDD\|379442	pfam14054, DUF4249, Domain of unknown function (DUF4249). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 279 and 365 amino acids in length. There are two completely conserved residues (C and G) that may be functionally important.	7.51942e-25

>CP023864.1|AUI56388.1|1345692_1347210_+|hypothetical-protein
MRQFNSLLRLLIAAVVFIGLSYATSAQAQPKKREFRGAWIQCVNGQFQGLGTQEMQRTLRYQLDELKKDGVNAIIFQVRPECDALYASKYEPWSKFLSGRQGTPPYPYWDPLQWMIEECHKRGMELHAWINPYRAKTKNTNQLAVNHVAITHPDRVFSYDGQYILNPALPENRNYICTVVDDIVSRYDVDGLHIDDYFYPYPAAGQTIPDQQNFQLDRRGFTNINDWRRNNVDLFVKQLGETIHRRKPWVKFGVSPFGIYRNQKSDPRIGSRTNGLQNYDDLYADVLKWVNNGWIDYCVPQLYWEIGNKAADYKELIGWWNRNAAKRPLYIGEDVLRTVKFADPQNPNSNQLPAKRRLHQQSANVNGTVLWYAKSVVDNPGNYGTLLRTNYWRYPALQPSMPFIDDDAPSKPKRVKARHEDDGYYLTWKAPRGEGWNDAPYRYVVYCFQPHEPINLDDPSKIVAMPYENRLRLNYQGGQTKYVFVVTALDRMSNESSGKKKKVKL
>CP023864.1|AUI56387.1|1345115_1345550_+|hypothetical-protein
MRLKRIILMLCLILNAAFICAQGRFDPNKVRLETHKFITKEANLSAQEASRFFLIYDEMRSKQRVYFDRLRTLHNTKPKSTREASDIITKSDMLEIQLKHIEQRYHVEMLKVIPADKLLQILEAERRFHRQMFRKMAGEGKGRR
>CP023864.1|AUI56386.1|1344703_1345099_+|hypothetical-protein
MESTNHLQTQYGNKRPFTVPDGYFSDLSTRVMEQLPAVEQKDTTHPTTVQHIAFRYLRPLAAAAVTVGIVLVGFLSYHAFEGQQDESALAGHNGAKASTALSATSEDGFDQAADYFMIDESDMYAYMENNQ
>CP023864.1|AUI56385.1|1344086_1344635_+|RNA-polymerase-sigma-factor
MSSLDEDDVIRLLASPEGRRKVFPMIVDQYGEPLYWKIRSIVLTHDDADDVLQNTFLKAWKNLPTFEGRSKLSTWLYRIAINEALDFLRRQKATTLASADADLSIANQLMADDYFDGDRSQALLQQAIAMLPDVQRTVFTLRYYDEMKYSEISELLGTSEGSLKASYHVAVQKVTDYLKRNE
>CP023864.1|AUI56384.1|1343728_1344040_+|T9SS-C-terminal-target-domain-containing-protein
MIKKIFTPFLFTLLLSVGFTSTVQARAAIDLIDLDVQTISISVLGNVLHVVGAEDEQLSVYNVTGVRVMSVKVDGGDKHYTLNFPKGCYIVKVGNVVRKVSIR
>CP023864.1|AUI56383.1|1338453_1341855_-|glycosyl-transferase-family-2
MSKQVFQTDSRQRWSYFKWTLRVVLTILSLFGIVFLAMFALEGSPQMPFHHDYRNAVSASSPYTKDNKTATLYKSFRDFFKEKKMHNNYAKATIKKQRFVGKADSLTQKYFREWDDPRIGVRSAWYVNWDKHAYISLKNNIRHLNMVLPEWFFINPKTDKVEYRLDKQALRLMRKAGIPILPMLTNNYNSDFHPEGIGRIMRDRKKRTALINELVKKCKHYGFAGINLDLEELDIQDNDLLVELVKEFARVFHANGLYVTQAVAPFNEDYNMQELAKYNDYLFLMAYDEHNMGSQPGAVSSQRWVEKATDWAAKNVPNDKIVLGMATYGYDWPNGETASTVSFDQTMATALDADAKVKFDDDTYNVNFSYQNTDDGKIHQVFFTDAATTFNIMRFGAEYHLAGYGLWRLGTEDKRIWRFYGKDMSWENVARMSVKKLMQLNGTDDVNFVGSGEVLEVTTEPHPGNISVTIDKDNRLISEEYYHSLPSTYTIQRLGKCKDKQLVITFDDGPDSRWTPTVLSTLKKYNVPAAFFMVGLQMEKNLPLVKQVYDAGHTIGNHTFTHHNMIENSDNRSYAELKLTRMLIESVTGHSTILFRAPYNADADPTDHEEIWPMIVASRRNYLFVGESIDPNDWQQGVTADQIYQRVIDGVHHEDGHIILLHDAGGDTRKPTIEALPRIIETLQHEGYQFISLEQYLGMNKQTLMPAINKGKAYYAMQTNLWLAEMIYHVSDFLTALFLVFLVLGMMRLVFMYVLTFREKRAENRRNYAPIDAATAPAVSIIVPGYNEEVNIVRTITTLKQQDYPNLHIYFVDDGSKDHTLERVREAFDTDDKVTVLAKKNGGKASALNYGIAACRSEYVVCIDADTQLKQDAVSRLMKHFIADKDKRIGAVAGNVKVGNQRNMLTYWQAIEYTSSQNFDRMAYSNINAITVVPGAIGAFRKEVIEEVGGFTTDTLAEDCDLTMSINEHGYIIENENYAVAMTEAPETLRQFVKQRIRWCFGVMQAFWKHRSSLFSPSKKGFGLWAMPNMLIFQYIIPTFSPLADVLMLIGLFSGNALQIFFYYLIFLLIDASVSIMAYIFEGERLWVLLWVIPQRFFYRWIMYYVLFKSYLKAIKGELQTWGVLKRTGHVGE
>CP023864.1|AUI56382.1|1335914_1337747_+|hypothetical-protein
MNIRNITLKDKLLVILILISTAIPCIAQSGKQNYTRAYDLDFKMLPDSLRPYRWIENGAYALYTIPWGVKGPMRTLYARRYIKEIPIVDRLRTEFSHRILLPHDNLKEGVVGLECKGSGLKRVVLTLQAIDEEEKVVATGSFICKPDSVLKTYSTHINLTNASSLNIGINVLGEERKDAYIAFSKLEVTLDNKPIDDYPVRTLAPLRVEGGLNLIREDSNHCFDLAQIDGLRDKRIIGLGESLHGNSDVKSFVTRLIEASVKRHDCRLVLMEFPLGKSLFFNRYIQDDSFTMDSSLIPHPTVSALLNVLRTYNRGRADSDKVRLFGIDYTHQKTISMSSTLHLFDFIAALNKEQHIPEADRLAVMIMKDKLADAVNYLDKHRAEIAKLLSDDEMACFDFILKLNVQHQQTPSFERYAQRDSTMALCAKFLIDRCAKDKREKVFIYSHATHVNPVSTYPAVPCLPMGSYLREAYGDDYCPLLLVTEGGDAIATDITFGMKDAAINKAPANSLEYCLNASTDASVYLPMTPAFNRLIPTRFKGAYHVLQEFFPINVYQRFRGVFFVKHDEKNNVHIHQTSLEDGSKLAITNMKQRKQLLKEMEDRLKNVDNK
>CP023864.1|AUI56381.1|1335126_1335693_+|hypothetical-protein
MKRIKNICYAFLLAFLFCLPIWGQNDVKITRVGKLIQESLPSTWERDTFMTYYIAADADSTERFIKEGNWKPAYEKRYTPYNNVSLPLIDECFAESISAVLTEEQKKLLNLIGKKSNIMWSKFYVFINSKKRFVKIKMMSSTAKYLTHEQIYEILRLYSKCKLPVHPVVGAFKEKEYYITGASVFKIK
>CP023864.1|AUI56380.1|1333997_1334756_+|hypothetical-protein
MVMKKDLRTRLVSFFGSRGMKAVCIILLQLLCVPTVWAQVTEEDLDTTELFKWNPPTIEGKCEQQNIRLNIKQPYKLIRSRGYIPCQLPCDTKECIFRHIIAQSDASIVHQDKDCELYLKTSIRSGNSRDDLTPLPTGGKINMNIYGYIKSDLKWQVDKMCKVAEPCEVDEIKMLLTDYPASLAKQYFNADYMLMYPIDTKQQECRDKFTRARCVVIGKDYRYVFMYFFLTDDNAKDLNKYLAQLKGMIWFN
>CP023864.1|AUI56379.1|1333462_1333945_+|hypothetical-protein
MIRKLYLAISLALCLAVAPQALYAQKGKAKTAVCKLNETQKEKQLFAYGFYKTYMNSLLYTQLGDLSSVIAEKFVSPSVMKKSVDMDGDVLIDAQACDEENIRTLKVVPLNNDWLCVSYLWITPYKDVGTKRKVVYIKVKEQGNSFVIEDATTKKPDLRK
>CP023864.1|AUI56389.1|1348746_1351272_+|hypothetical-protein
MNKPLLLAAIWLSPLMLYAHDTAGRSHTNPTNKTMVMTNKEMVVTTSEPTDEDKGRRRFTLSGYVKDRNGEPLINATVYDLTTRQGTMTNAYGHFSLTLTEGNHEIRCSYVGYKTLTDAVTLTANRNYDITLQNDAELTEVVVTTDLNSPLLKTQTGKLSLSQKDIMTEYALMSSPDVIKTLQRTSGVAEGMELTSGLYVHGGNNDENLFLLDGTPLYHTNHTLGLFSSFNVDVVKNVDFYKSGFPARYGGRLSSVTDVRTADGDLYHIHGSYRIGLLDGSVHLEGPLRKGKTSYNIGIRRSWLDLLTRPAFAIINSRRDNEDKVSMAYFFHDMNLKLTNIFNERSRMSLSVYSGEDRLDAKDEWGDHRDDNGYGEYDIYKNSFHWGNFNAALDWNYQFSPKLFANFTAFYTHNRSSVSSSDEWTVRRSDGKDQLTTTSHGYRSAIDDIGYRAAFDFRPTPRHHILFGQEYTYHRFQPQTFNRFDGYQGGREEKGDTIAIHSHNKNIAHQVTLYAEDEMTLNERWSVNGGLNVDLFSISGKTFSTLSPRLSMKFQPSDRLSFKASYTLMSQFVHKIANSFLDLPTDYWVPTTARLHPMRAWQLAAGAYLKPNAHWLLTLEGYYKHSSHILQYASWAGLEPPAANWDYMVMEGEGRSYGVELDADYTIANFALHGSYTLSWAEKKFDDFHNDWYYDKFDNRHRLTLSGRWNITKKISAFAAWTFHTGNRMTVPTQYIGLPTVPAQTGGGITFTSPDDNLLNFAYEQPNNVVLPAYHRLDLGIDFRHTTKKGHERIWNISLYNAYCHLNSLWVRVKVNSENKIMIKNNAFIPVIPSFSYTIKF
>CP023864.1|AUI56390.1|1351281_1352376_+|DUF4249-domain-containing-protein
MRKIYLFLLLALLMTGCKDDFSVSNLPDAKPKMVVYCMPSTADTTYITVLRSVPLKQYNAAQPNVLIDNATISYQLNGQSLPVTAVGQGRYYVVGQQKAGDKVHLQVEAQGLETVESTTEIPQPVAISSTSTRMVRMKEDPSSYLRDFLQVQATFTDPAQSHDYYAVRVKIKRLMSCRIDCFRRDIVGDFNEVATFFDYDNYLQVRQNEQWDSVAVNYLLQEDDIPIYTASEPLLNPLSDIDDDFDFSSDFYQDFYIFDDATINGREYTLHLNVQPNTALMNLSDEALKEMKERYGIEQGFILEFYHLTPEYYRFLQALNDVSNNSLAQAGLSSIRTTYSNVLNGMGICAAYNLPKGTWVRLKR
>CP023864.1|AUI56391.1|1353990_1358022_+|beta-galactosidase
MHKQFLFGLLLSSLMAAPVHADDHPTGGYLFGQAAAPTGNEWQAPGELGYNKLPARALFSSFSSVDEARKVLPEYAKDYLSLDGEWRFHFSKNPDERPKDFFTRGYDDSRWERLQVPVSWNMAGIQKDGTLKYGVPIYVNQWVIFKYNIEPGDWKKGVMREPPKNYTTYEYRNEVGSFRRSFDIPATWDGKEVYLNFDGVDSFFYLWINGRYVGFSKNSRNTARFDISPYINKGKNEIAVEVYRSSDGSFLEAQDMFRLPGIFRNVSVTATPKVHVADVKAIPAYTDGKGTVNLNTTLQNLTAKTAKDLHIRWSLYKNRLFADDNELVATFEDAKAKTTCNSKGQAAIRQTLTVDNVAAWTAEAPNVYVVVGELMQGKKVLETISFQTGFRTVEIKDTPASQDEFGLAGRYYYINGKPVKLKGVNRHDTNPLTGKVISREQMEHEIMLMKRANINHIRTSHYPNDPYFYYLCNKYGIYLESEANIESHEYFYGKASLSHVPEFQAAHVDRVMTMAHQLVNNPSIVIWSLGNEAGPGHNFVVAYDSLKAYDASRPVQYERNNDIVDMGSNQYPSIAWTRDAVKGRMGIKYPFHISEYAHSMGNAVGNLVDYWEAMESTNFFMGGAIWDWIDQSMYNYTKEGKRYHAYGGDFGDTPNDGQFVMNGIIFGDEQPKPQYYEVKKVYQYIGTTWKDAKTATLDVFNKNYYTDDLSGYAMSYVLTADGVAVKKGELDLGSVPARTHKAITITGLNEGLDPNKEYLLHIVYRLKEDMPWAKTGYVQAEEQLPVQVAAARPAIATAGKVNMSAVKDNKIVLSGKTFTTTFDLTKGTIYNLQYDGKTIIPDGCGPELNAFRAWVNNDNWAYEGWYANGLNNLQHKCTSYTTHANANGSVSVVCNVESQAPYSYRLEGGNANWKKLIENKEKPFGKDDFRFTTQVVYTIFPDGSIESESAITSNKPNLTLAKLGYTVRLPKALRLLNYYGRGTVDNYPDRKTGQMIGIYEQQDVEDEFVAFPKPQDTGNHQDTRWLSLAGNGGQDALYGALFVAKDKMSFSALPWSDNTIAMANHPHELPQSDYTYLHLDMAITGLGGNSCGQGGPLQRDRVMATPHTFGYMIRPMNSVETNDLVSNANVSLNGATPLTIVRDAEGNVTINANGAKGDIFYRLNGSKKAVKYTGPVGLREGGTISAWTKENDWLVASQSFSRIESIPLSVVFASSQESGEGDASHLTDGDPSTYWHTMYSVTVANHPHWVDFDCGGVKTIKGFTYLPRQDSNNGNIKKYSIQVSNDGKTWGKAVAEGEFENNRKEKTVLLTTPVKARFVRLTALSEQSGQDFATGAEFKVLEK
>CP023864.1|AUI56392.1|1358177_1358492_-|transcriptional-regulator
MVIDPLFPTCPIRNIISRICVADTLCLIQTLGKRGWASYEELSSYFPEDALSASLTVLKEDKIVVESGNRYSLSNIGRELCPLISMLITWCEKNVSQSVGQSFR
>CP023864.1|AUI56393.1|1358485_1358938_-|cupin-domain-containing-protein
MKTVETIQSGKNFTAVNVGKLSEIKDYVLPFGDIEIPGKVFVGQALQATGSELSFQTLVPGQDSGFLHSHKTHEELYFILRGQGEYQVDGEVFPVTEGSIVRVAPEGKRALKNTGNDEMLMLCIQYRANSFGKDDSPAGDGVILNEELKW
>CP023864.1|AUI56723.1|1359169_1359538_+|transcriptional-regulator
MNRNEVRDALYPNCPVRNVLSRVGDKWSMLVLFTLENNRCQRFKELQRNIPDISQKMLTTTLKMLEGDGLIHREVFPEVPPRVEYSLTEKGKSLLPLIDNLLSWASENMDDIIESRRQYLLK
>CP023864.1|AUI56394.1|1360102_1360360_-|hypothetical-protein
MSISFSHCEYFFLSLWVFLSLTERTEFTEPFGAHFEPTERLRHTENTEASPPTPLRMERGVVCEVTPLGLLAYFVEVFLSQNSQI
>CP023864.1|AUI56724.1|1360519_1361851_-|DNA-recombination-protein-RmuC
MSIFYFLIGIFIGAIIMLLWMKNKSTQDLSTVSEQLAVVRNQLETERKGVDERIAAVKEAARQQLEAERRHGEQLRDELKKQTEAKNRLLQEEVRNMAAKMLDESREKMNTADKERLDALLSPLKERLEAFNQTVTNNSKENTANKTEIKTTFEEAMKRLHTEQEMTIKAMREDQERAVKELREQTERIGNDAASLTQALKGDSKMQGDWGEMILEKTLEDCGLTKDSEYFLQKNYRDRDGNNYRPDAVIAFPHNECAVIDAKVSLTAYQAAIKEEDAAKRERYLREHVSSIKKHVDELAKKDYERLVPHCIGYVLMFVPYESGYSAALKTDPTILQYAYQKHIIILSPSNLLMALQLTHAMWQNFRITENVENILHESNELYNKFVNFAESFVKIGTNIERLQQEFNRAKGQLNEGKGNIVRRLEGLRTLGINPKKQIPEGL
>CP023864.1|AUI56395.1|1362055_1364536_-|bifunctional-UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine-ligase/alanine-racemase
MNYTIEKVTTLIGARRYGDQDANISFVLTDSRSLCFPEETLFFALKSERNDGHNYIPELYARGVRNFVVEVVPDDWATRYPASNFLKVVGSLEALQRLAERHRDEYLIPIVGITGSNGKTMVKEWLYQLLSPQMIVTRSPRSYNSQIGVPLSVLLLNENTQVGVFEAGISQPGEMMALRDIIQPTIGVFTSLGTAHQENFSSIEDKCNEKIKLFHDTEAIVYPADEEIITRCLAPYDYKGKKLDWSVKQQQAAFFVTSIEKKDIATTVSYMWQGETKGQYKLPFIDDASIENSITCAVVSLHLGITPAALSERMAQLEPVAMRLEVKEGQHGCTLINDSYNSDFNSLDIALDFMNRRPDHKGRKRTLVLSDILQSGDTDKDLYNKVAFLCEKRGVEKFIGIGEGLLSQRSAFKHLREKHFFATVNAFIHSDIFANLHDEVILLKGARQFGFDRLTELLVKKVHETVLEVNLNAVVDNLNWYRSFLKPTTKLVCMIKADAYGAGAVEIAKTLQDHRVDYLAVAVADEGVTLRKNGITSNIMIMNPEMTSFKTLFDYDLEPEVYSFRLLDALVKAAQKEGITGFPVHIKLDTGMHRLGFDPQKDMDELIKRLKHQNAIIPRSVFSHFVGSDADSFDEFSARQFALFDEGSKKLQAAFSHKIIRHMDNSSGIEHFPERQMDMCRLGLGLYGINPRTNKTINNISTLKTTILQLRNVPAGDTVGYSRKGTIDHDSVIAAIPIGYADGLNRHLGNRHCYCLVNGKKAEYVGNICMDVAMIDVTGIDCKEGDTVEIFGDHLPVTVLSDALDTIPYEVLTTISTRVKRVYFQD
>CP023864.1|AUI56396.1|1364620_1365061_-|transcriptional-repressor
MEELNDKQAELLLKEHGIRLTANRILIARTLSTMSYPASMKELEAKIQTIDKSNIFRTLLLFKQHHLVHQMEDGNDVVRFELCQSQDEKTDDDMHVHFYCERCQHTYCLSDTPIPQVELPAGFEQSSVNYMVKGLCPKCSHRYYLK

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Crispr_ID: CP023864_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_19

1370264-1370365

Orphan

Consensus_repeat	Method
AAACTTTGCGCAAATATGTTCTGTTAAATCTGTGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_19

>merge|CP023864|19|1370264-1370365|CRISPRCasFinder
AAACTTTGCGCAAATATGTTCTGTTAAATCTGTGAGATCTGTGAGAGACAAAATTCCCCACGAATTAAACTTTGCGCAAAAATGTTCTGTTAAATCTGTGAG

>CP023864|19|16|1370264-1370365|CRISPRCasFinder
AAACTTTGCGCAAATATGTTCTGTTAAATCTGTGAG	ATCTGTGAGAGACAAAATTCCCCACGAATT
AAACTTTGCGCAAAAATGTTCTGTTAAATCTGTGAG

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56724.1\|1360519_1361851_-\|DNA-recombination-protein-RmuC	unknown	unknown	gnl\|CDD\|376878
CP023864.1\|AUI56394.1\|1360102_1360360_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56399.1\|1367248_1369456_-\|sodium-translocating-pyrophosphatase	unknown	unknown	gnl\|CDD\|376979
CP023864.1\|AUI56406.1\|1378968_1380375_+\|chromosomal-replication-initiator-protein-DnaA	unknown	unknown	gnl\|CDD\|273037
CP023864.1\|AUI56400.1\|1371325_1371556_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56723.1\|1359169_1359538_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
CP023864.1\|AUI56392.1\|1358177_1358492_-\|transcriptional-regulator	unknown	unknown	unknown
CP023864.1\|AUI56407.1\|1381618_1381957_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56409.1\|1384584_1385907_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370821
CP023864.1\|AUI56403.1\|1375884_1376268_+\|dihydroneopterin-aldolase	unknown	unknown	gnl\|CDD\|376737
CP023864.1\|AUI56405.1\|1377610_1378591_+\|MCE-family-protein	unknown	unknown	gnl\|CDD\|224380
CP023864.1\|AUI56408.1\|1382125_1384585_+\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|183088
CP023864.1\|AUI56397.1\|1365063_1365876_-\|GSCFA-family-protein	unknown	unknown	gnl\|CDD\|378080
CP023864.1\|AUI56401.1\|1372389_1373127_-\|NADPH-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380322
CP023864.1\|AUI56402.1\|1373223_1375824_+\|ribonucleoside-diphosphate-reductase,-adenosylcobalamin-dependent	unknown	unknown	gnl\|CDD\|274168
CP023864.1\|AUI56398.1\|1366217_1366652_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|223979
CP023864.1\|AUI56395.1\|1362055_1364536_-\|bifunctional-UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine-ligase/alanine-racemase	unknown	unknown	gnl\|CDD\|237026
CP023864.1\|AUI56393.1\|1358485_1358938_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380390
CP023864.1\|AUI56404.1\|1376320_1377598_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
CP023864.1\|AUI56396.1\|1364620_1365061_-\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56724.1\|1360519_1361851_-\|DNA-recombination-protein-RmuC	gnl\|CDD\|376878	pfam02646, RmuC, RmuC family. This family contains several bacterial RmuC DNA recombination proteins. The function of the RMUC protein is unknown but it is suspected that it is either a structural protein that protects DNA against nuclease action, or is itself involved in DNA cleavage at the regions of DNA secondary structures.	4.86297e-95
CP023864.1\|AUI56406.1\|1378968_1380375_+\|chromosomal-replication-initiator-protein-DnaA	gnl\|CDD\|273037	TIGR00362, DnaA, chromosomal replication initiator protein DnaA. DnaA is involved in DNA biosynthesis; initiation of chromosome replication and can also be transcription regulator. The C-terminal of the family hits the pfam bacterial DnaA (bac_dnaA) domain family. For a review, see Kaguni (2006). [DNA metabolism, DNA replication, recombination, and repair].	5.25454e-162
CP023864.1\|AUI56399.1\|1367248_1369456_-\|sodium-translocating-pyrophosphatase	gnl\|CDD\|376979	pfam03030, H_PPase, Inorganic H+ pyrophosphatase. The H+ pyrophosphatase is an transmembrane proton pump involved in establishing the H+ electrochemical potential difference between the vacuole lumen and the cell cytosol. Vacuolar-type H(+)-translocating inorganic pyrophosphatases have long been considered to be restricted to plants and to a few species of photo-trophic bacteria. However, in recent investigations, these pyrophosphatases have been found in organisms as disparate as thermophilic Archaea and parasitic protists.	0
CP023864.1\|AUI56723.1\|1359169_1359538_+\|transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	8.03133e-43
CP023864.1\|AUI56404.1\|1376320_1377598_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	2.03276e-59
CP023864.1\|AUI56409.1\|1384584_1385907_+\|hypothetical-protein	gnl\|CDD\|370821	pfam10117, McrBC, McrBC 5-methylcytosine restriction system component. Members of this family of bacterial proteins modify the specificity of mcrB restriction by expanding the range of modified sequences restricted.	1.88253e-26
CP023864.1\|AUI56403.1\|1375884_1376268_+\|dihydroneopterin-aldolase	gnl\|CDD\|376737	pfam02152, FolB, Dihydroneopterin aldolase. This enzyme EC:4.1.2.25 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate.	6.06011e-35
CP023864.1\|AUI56405.1\|1377610_1378591_+\|MCE-family-protein	gnl\|CDD\|224380	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism].	3.90972e-14
CP023864.1\|AUI56408.1\|1382125_1384585_+\|restriction-endonuclease	gnl\|CDD\|183088	PRK11331, PRK11331, 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional.	2.2197e-24
CP023864.1\|AUI56397.1\|1365063_1365876_-\|GSCFA-family-protein	gnl\|CDD\|378080	pfam08885, GSCFA, GSCFA family. This family of proteins are functionally uncharacterized. They have been named GSCFA after a highly conserved N-terminal motif in the alignment. Distant similarity to the pfam00657 lipases suggests these proteins are likely to be enzymes.	6.73042e-89
CP023864.1\|AUI56401.1\|1372389_1373127_-\|NADPH-dependent-oxidoreductase	gnl\|CDD\|380322	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA. This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH as an electron donor. Oxygen-insensitive nitroreductase, such as NfsA protein in Escherichia coli, catalyzes reduction of nitrocompounds using NADPH as electron donor.	1.37736e-72
CP023864.1\|AUI56402.1\|1373223_1375824_+\|ribonucleoside-diphosphate-reductase,-adenosylcobalamin-dependent	gnl\|CDD\|274168	TIGR02504, ribonucleotide_reductase, ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent. This model represents a group of adenosylcobalamin(B12)-dependent ribonucleotide reductases (Class II RNRs) related to the characterized species from Pyrococcus, Thermoplasma, Corynebacterium, and Deinococcus. RNR's are responsible for the conversion of the ribose sugar of RNA into the deoxyribose sugar of DNA. This is the rate-limiting step of DNA biosynthesis. This model identifies genes in a wide range of deeply branching bacteria. All are structurally related to the class I (non-heme iron dependent) RNRs. In most species this gene is known as NrdJ, while in mycobacteria it is called NrdZ. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0
CP023864.1\|AUI56398.1\|1366217_1366652_+\|NUDIX-hydrolase	gnl\|CDD\|223979	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism].	5.66348e-37
CP023864.1\|AUI56395.1\|1362055_1364536_-\|bifunctional-UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine-ligase/alanine-racemase	gnl\|CDD\|237026	PRK11930, PRK11930, putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Provisional.	0
CP023864.1\|AUI56393.1\|1358485_1358938_-\|cupin-domain-containing-protein	gnl\|CDD\|380390	cd06985, cupin_BF4112, Bacteroides fragilis BF4112 and related proteins, cupin domain. This family includes archaeal and bacterial proteins homologous to BF4112, a Bacteroides fragilis protein of unknown function. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	8.03521e-51
CP023864.1\|AUI56396.1\|1364620_1365061_-\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	6.51234e-17

>CP023864.1|AUI56399.1|1367248_1369456_-|sodium-translocating-pyrophosphatase
MEHIPQVFWLIPIASVCALGMAWYFFKSMMRSEEGTPRMIEIAEYVRRGAMAYLKQQYKVVLIVFVVLAIVFAIMAYGFNAQNEWVPFAFLTGGFFSGLAGFFGMKTATYASARTANAARNGLNDGLKIAFRSGAVMGLVVVGLGLLDIAIWFIVLTWFYADKMTTSEMLITITTTMLTFGMGASTQALFARVGGGIYTKAADVGADLVGKVEANIPEDDPRNPATIADNVGDNVGDVAGMGADLYESYCGSILSTAALGATAFAASSGDMQLKAVIAPMLIAAVGVFLSLFGIFLVRTKEGATMKDLLHALGLGTNTAAVLIAAASFLILYLLGLENWLGVSFSVITGLAAGVIIGQATEYYTSQSYMPTKAISEASHTGAATVIIKGIGTGMISTCVPVLSISVAIMLSYLCANGFDMSMSALSIQHGLYGIGIAAVGMLSTLGITLATDAYGPIADNAGGNAEMSELGAEVRHRTDALDALGNTTAATGKGFAIGSAALTALALLASYIEEIKIAMARVGTQMTNVAGETIDATKATIPDFMNFFQVNLMNPKVLVGAFIGAMAAFLFCGLTMGAVGRAAGKMVAEVRRQFREIKGILEGTGTPDYGRCVEISTQSAQHEMIIPSLLAIIIPVIVGLLLGVAGVLGLLVGGLAAGFTLAVFMSNAGGAWDNAKKYVEEGNFGGKGSDAHKATVVGDTVGDPFKDTSGPSLNILIKLMSMVSIVMAGLTVACL
>CP023864.1|AUI56398.1|1366217_1366652_+|NUDIX-hydrolase
MYTYKYPHPAVTADCLVFAHTENGLELLLIQRRNEPCKGKWAFPGGFMNIDETTADAARRELKEETGLIVEDLHRVGVYDAVDRDPRERVITVAYYTILDKPAEVSGLDDAAQAKWFPLTELPDLAFDHKDILLAAKQLMGLTE
>CP023864.1|AUI56397.1|1365063_1365876_-|GSCFA-family-protein
MEFRTIVNIPRPTFELEPCERILFVGSCFADNIGKRFEEEKFRAVVNPFGVMYNPVSVLHTARKMAGTPFDTAVFTLGTNHVYVERATGEIVDNCQKRPQREFEERELTIDECADALREAISLLRTSNPRLRVIVTVSPIRYAKYGYHESQLSKAVLLLAADKLTKEASGEVYYFPAYEIVNDELRDYRFYKADMLHPNEQAVAYIWEQLVATCFSATAKQFLKEWRPIKEALAHRPFHPEAATYQDFLKKTKEAARLLKQKYPNLELKE
>CP023864.1|AUI56396.1|1364620_1365061_-|transcriptional-repressor
MEELNDKQAELLLKEHGIRLTANRILIARTLSTMSYPASMKELEAKIQTIDKSNIFRTLLLFKQHHLVHQMEDGNDVVRFELCQSQDEKTDDDMHVHFYCERCQHTYCLSDTPIPQVELPAGFEQSSVNYMVKGLCPKCSHRYYLK
>CP023864.1|AUI56395.1|1362055_1364536_-|bifunctional-UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine-ligase/alanine-racemase
MNYTIEKVTTLIGARRYGDQDANISFVLTDSRSLCFPEETLFFALKSERNDGHNYIPELYARGVRNFVVEVVPDDWATRYPASNFLKVVGSLEALQRLAERHRDEYLIPIVGITGSNGKTMVKEWLYQLLSPQMIVTRSPRSYNSQIGVPLSVLLLNENTQVGVFEAGISQPGEMMALRDIIQPTIGVFTSLGTAHQENFSSIEDKCNEKIKLFHDTEAIVYPADEEIITRCLAPYDYKGKKLDWSVKQQQAAFFVTSIEKKDIATTVSYMWQGETKGQYKLPFIDDASIENSITCAVVSLHLGITPAALSERMAQLEPVAMRLEVKEGQHGCTLINDSYNSDFNSLDIALDFMNRRPDHKGRKRTLVLSDILQSGDTDKDLYNKVAFLCEKRGVEKFIGIGEGLLSQRSAFKHLREKHFFATVNAFIHSDIFANLHDEVILLKGARQFGFDRLTELLVKKVHETVLEVNLNAVVDNLNWYRSFLKPTTKLVCMIKADAYGAGAVEIAKTLQDHRVDYLAVAVADEGVTLRKNGITSNIMIMNPEMTSFKTLFDYDLEPEVYSFRLLDALVKAAQKEGITGFPVHIKLDTGMHRLGFDPQKDMDELIKRLKHQNAIIPRSVFSHFVGSDADSFDEFSARQFALFDEGSKKLQAAFSHKIIRHMDNSSGIEHFPERQMDMCRLGLGLYGINPRTNKTINNISTLKTTILQLRNVPAGDTVGYSRKGTIDHDSVIAAIPIGYADGLNRHLGNRHCYCLVNGKKAEYVGNICMDVAMIDVTGIDCKEGDTVEIFGDHLPVTVLSDALDTIPYEVLTTISTRVKRVYFQD
>CP023864.1|AUI56724.1|1360519_1361851_-|DNA-recombination-protein-RmuC
MSIFYFLIGIFIGAIIMLLWMKNKSTQDLSTVSEQLAVVRNQLETERKGVDERIAAVKEAARQQLEAERRHGEQLRDELKKQTEAKNRLLQEEVRNMAAKMLDESREKMNTADKERLDALLSPLKERLEAFNQTVTNNSKENTANKTEIKTTFEEAMKRLHTEQEMTIKAMREDQERAVKELREQTERIGNDAASLTQALKGDSKMQGDWGEMILEKTLEDCGLTKDSEYFLQKNYRDRDGNNYRPDAVIAFPHNECAVIDAKVSLTAYQAAIKEEDAAKRERYLREHVSSIKKHVDELAKKDYERLVPHCIGYVLMFVPYESGYSAALKTDPTILQYAYQKHIIILSPSNLLMALQLTHAMWQNFRITENVENILHESNELYNKFVNFAESFVKIGTNIERLQQEFNRAKGQLNEGKGNIVRRLEGLRTLGINPKKQIPEGL
>CP023864.1|AUI56394.1|1360102_1360360_-|hypothetical-protein
MSISFSHCEYFFLSLWVFLSLTERTEFTEPFGAHFEPTERLRHTENTEASPPTPLRMERGVVCEVTPLGLLAYFVEVFLSQNSQI
>CP023864.1|AUI56723.1|1359169_1359538_+|transcriptional-regulator
MNRNEVRDALYPNCPVRNVLSRVGDKWSMLVLFTLENNRCQRFKELQRNIPDISQKMLTTTLKMLEGDGLIHREVFPEVPPRVEYSLTEKGKSLLPLIDNLLSWASENMDDIIESRRQYLLK
>CP023864.1|AUI56393.1|1358485_1358938_-|cupin-domain-containing-protein
MKTVETIQSGKNFTAVNVGKLSEIKDYVLPFGDIEIPGKVFVGQALQATGSELSFQTLVPGQDSGFLHSHKTHEELYFILRGQGEYQVDGEVFPVTEGSIVRVAPEGKRALKNTGNDEMLMLCIQYRANSFGKDDSPAGDGVILNEELKW
>CP023864.1|AUI56392.1|1358177_1358492_-|transcriptional-regulator
MVIDPLFPTCPIRNIISRICVADTLCLIQTLGKRGWASYEELSSYFPEDALSASLTVLKEDKIVVESGNRYSLSNIGRELCPLISMLITWCEKNVSQSVGQSFR
>CP023864.1|AUI56400.1|1371325_1371556_-|hypothetical-protein
MICEVTPIRLLTYFVKVFSLTERTEFTEPFGAHFEPTERLRHTDITERYCQRRVLGDGCWVLMISKRRMLGDGCWL
>CP023864.1|AUI56401.1|1372389_1373127_-|NADPH-dependent-oxidoreductase
MEMFNNRKTIRKYTSKEVSEDLIRTLLEKAERTPTMGNLQLYSVVITREAEKKVQLAPAHFNQPMVTGAPVVLTFCADFRRTTLWAENRKAMPGYDNFLSFLNAATDALLYCQTFCNLAEEEGLGTCFLGTTIYNPQSIIKTLGLPRLVMPVATITLGWPDENPPLTDRLPIDSIIHNETYNDYTPARIDTFYTPKEQLEENKHFVEINHKETLAQVFTDLRYTKEANEAISEVLLKTLKEQGFM
>CP023864.1|AUI56402.1|1373223_1375824_+|ribonucleoside-diphosphate-reductase,-adenosylcobalamin-dependent
MTTNQTYSFDEAFQATLAYFGGDELAARVWVNKYAMKDSYGNIYEKSPEQMHWRIANEIARIEQKYKNPLTAQEVFDLLDHFRYIIPAGSPMTGIGNNHQVASLSNCFVIGLDGNADSYGAIMRIDEEQVQLMKRRGGVGHDLSHIRPKGSPVNNSALTSTGLVPFMERYSNSTREVAQDGRRGALMLSVSIKHPDSEAFIDAKMEEGKVTGANVSVKITDEFMQAVVEGKPYVQQFPIDSDEPAVTKEVSAKELWEKIVHNAWKSAEPGVLFWDTIIRESIPDCYADLGFQTVSTNPCGEIPLCPYDSCRLLSLNLYSYVIDPFTDHARFDKELFERHAQLAQRLMDDIIDLEMEKIDLILTKIKSDPQQDEVKSAEYHLWEKIKKKSCLGRRTGVGITAEGDMIAAMGLRYGTQEATDFSVSIHRALALNAYRSSVTMAQERGAFEIYDAKREANNPFILRLKEADAQLYEDMKRYGRRNIACLTIAPTGTTSLMTQTTSGIEPVFMPVYKRRRKVNPNDTDVHVDFVDEVGDSFEEYIVYHRKFLTWMEVNGIDTQKRYSQEEIDELVKRSPYYKATANDVDWLMKVRMQGEIQKWVDHSISVTVNLPNQVDEALVNKLYVEAWRSGCKGCTIYRDGSRSGVMISVSKKDKTKENKPADEEKAKDLNSAEEHHEHICNHPQVIEVRPKELECDVVRFQNNKEKWVAFVGLLEGYPYEIFTGLQDDEEGIALPKSVTKGKIIKQTAEDGTHRYDFQFENKRGYKTTVEGLSEKFNPEYWNYAKLISGVLRYRMPIDHVIKLVGSLQLKSESINTWKNGVERALKKYVTDGTSASGLKCPVCGQETLVYQEGCLICTNCGASRCG
>CP023864.1|AUI56403.1|1375884_1376268_+|dihydroneopterin-aldolase
MKIMTSYILLQGLQFHARIGVGAQERVVGNLYVVDLRIGYPFAKAMESDDVADTLNYATVFDIVREVMSRPARLLESAAGSLVKELSVAFPEISSIDLKIVKKNPPMGADSEGAGVELHLINDKTKD
>CP023864.1|AUI56404.1|1376320_1377598_+|N-acetylmuramoyl-L-alanine-amidase
MFKKISLLFVFLVMFAGLTWAADGRFTLVIDPGHGGHDAGAIGAISKEKDINLNIALAFGRYVERNMPDVNVIYTRKSDVFIPLHQRADIANKAKADLFVSVHTNSVASGRYVKGFQVYTLGMHRAKDNLDVAKRENSVISMEKGYQQTYQGFDPNSSESYIMFEFMQNANMERSVELARMIQNAVCSSAGRIDKGVHQAGFLVLRESYMPSCLIELGFITAADEEEYLNSPEGIDAMARGIYNAFVQYKNKYDTRIVVPYRPVENKKIVIDRVIPTAPVDKPRTVVPTERRQTVSQTEKPRRMSKVEEAKKRISAAIKDLLPTCDDRTTAQASVPVFKIQVMASNKQLRAGSPLFRGRTDINCTQEGNYYKYTVGSSTNYNEIARMRNNLLKDFPQSFIIAYKDGSRMDVNQAISEFLRNKKNK
>CP023864.1|AUI56405.1|1377610_1378591_+|MCE-family-protein
MKKVFTPQVKIAVVALLAIVVLFFGIQFLKGLSLFSNDAHYRIKFNDITGLSTSTPVYARGFKVGVVRDIDYNYDKLGESITVDIDVDKTMKVPEGTTAEIISDIMGNVKVVLKLGDSKKLLAANGWIDGCINDGTLGDIKGMVPAIQKMLPKVDSILGSVNSLLADPALRTSLHNVEDITTNLTTTSRELNQLLAQANGALPTVVGKAGRVMDNANGVMLNANKGITEARGAIRGANTMMGNLNNKVNELDIATTMAKVNATIDNMNAFTAKLNSNEGTLGLMLNDANLYNNLNNTVRTADSLLTNVKAHPKRYVHFSLFGRKDK
>CP023864.1|AUI56406.1|1378968_1380375_+|chromosomal-replication-initiator-protein-DnaA
MNASPKTLWDSCLQLIKENVTEQQFDTWFRPIVLQSYKPASKTLLVQVPSQFVYEYLEGHYVDLLRKVLTRVFGQGVQLTYRVLVDQENHLSQDLEQDTIEDVASQRPTARANQSPTVLDTVPQDLDSQLDPHKSFSNYVEGDSNKLPRSIGLSIAEHPNTTQFNPMFIYGPSGCGKTHLINAIGLKAKQLYPQKRVLYVSARLFQVQYTDSVRQNTTNDFINFYQTIDVLIVDDIQEWVTATKTQDTFFHIFNHLFRNGKRIILASDRPPVDLKGMNDRLLTRFSCGLIAELEKPNVQLCVDILHSKIKRDGLNIPEDVVRFIAETANGSVRDLQGVINSLLAYSVVYNSNIDMRLAERVIKRAVKIDDEPLTIDDILDKVCSHYNVTMTAVNSRSRKKDIVMARQVSMYMAQKYTKMPASRIGKLVGNRDHSTVIHSCSKIEDRLKVDKGFHAELASIENLFKLKA
>CP023864.1|AUI56407.1|1381618_1381957_+|hypothetical-protein
MKTFDFHYSVREVDGKEFELIECTTWPRLNVQVLHTTPERFEADLKEVKSRSLCGYSLQDKTFILKHAGGEGNGELTQANIDEIYDGMQAIMQAAVKWWIQNRKKLTTSEKE
>CP023864.1|AUI56408.1|1382125_1384585_+|restriction-endonuclease
MAIKTLYKTVNTNGDYSCGDIGITTAEWLDILRDERSMPYHEALLCFLRQDGNMATCTKVSKEYGKPAQYYNNKVYNFSKWVQRRLNRFRVVGPDNKETYWCIAMKKGRETRQGFLWQMRDELVDAFRVYLMEELIDIFEKEKLFIEYGEYYKWDLLDRVEGKEVLKVFDSLRGENIVDNPRVDTVIKYLVDNEADKTSVCCQHLINESVPLTTRLAAFKSDIEALCSGKWKNNANDERTAAALLTCVYPEKYTFYKDEIYRNIWRYFGYTPRKVGEKYGHFMELINGFVEHYGEEIQQIMLKEIERFKNKPLNLAVQTLFWCMKDYMQDKLDKKMNTDTNNSSKSTRYDDIVGIWRRRKNIVLHGAPGTGKTYDIPELAVRLCDPSFMSKGRSREEIVKRYNQLKDDERLTFTTFHQSLDYEDWIEGLRPVVNETSQVTYEIENGVFKRLCEAAERSKLEGNQYGISSKSDVWKVSLKRTGDNDVRKDCMENDYIRIGWDEYGDDVSDETDGSIRNDKGKLILDAYINKMKVGDIVMSCYSSKEIDAIGVITGDYRYDESLPAYKRIRPVHWLIKGKRENIVERNGGKEMVESTVYHLNSISLEDVEAILEKYGVFIEQKEDDKPYVMVIDELNRGNVSKVFGELITLLEADKRKGSKNEESVKLPYSKKSFHVPDNVYLIATMNTADRSLGSLDYAIRRRFAFIAERPIGLEDDRFNAELFEKVSRLFVKNFDEYKASGWDATMRLLPADTLCDEYKPEDVWIGHSYFLMQDEEGVDNSRERILYELIPLLEEYVRDGVLTADAQAVIDELYKQATA
>CP023864.1|AUI56409.1|1384584_1385907_+|hypothetical-protein
MRVVQLQEQLLENTCLRQSECEAILPCMDDGAEVVCTVRRGREEKELCLRLTRESDVVRATGSYFVGVDWIKEEDVAVQVSPKLNDGFEIDYVRMLNEALTETDNYKHLKDLLTIHFEKPSIRISQQQDLLSIFLITEYLNILHRIVRKGLKRSYYRVEETLNNKVKGRIQVGRTIQRSLAKGRITDNVCRYQVYDIDSPENRILKKALAFCRKQVGGYRNTLDTSVLERKIRQIKPYFERVSDEISVKSMRTFKGNPVYKEYYTAVEYAQLLLRRFSYDITLAGKKEIDTPPFWIDMSKLFELYVYSKLRAVFTGRKEVQYHVKEHRQELDYLLKPAKWAEPYVVDAKYKPRYGKGGGITIDDAREVSGYARLSWVYSKLDLDANAVAPIKCLIIYPDQKQEERFTFTRTTEPQFEKVSGYVRFYKVGIKLPVIASKNP

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Crispr_ID: CP023864_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_20

1392168-1392283

Orphan

Consensus_repeat	Method
GGGTGTTGGGTGAAGGGTGTTAGGTGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_20

>merge|CP023864|20|1392168-1392283|CRISPRCasFinder
GGGTGTTGGGTGAAGGGTGTTAGGTGTTGATGATTAGCTTAGGTGGGTGTTGGGTGAAGGGTGTTAGGTGTTGATGATTAACCAAAACGGGTGTTGGGTGATGGGTGTTAGGTGTT

>CP023864|20|17|1392168-1392283|CRISPRCasFinder
GGGTGTTGGGTGAAGGGTGTTAGGTGTT	GATGATTAGCTTAGGTGGGTGTTGGGTGAAGGGTGTTAGGTGTTGATGATTAACCAAAAC
GGGTGTTGGGTGATGGGTGTTAGGTGTT

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56406.1\|1378968_1380375_+\|chromosomal-replication-initiator-protein-DnaA	unknown	unknown	gnl\|CDD\|273037
CP023864.1\|AUI56415.1\|1395941_1396727_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|335247
CP023864.1\|AUI56420.1\|1400343_1400973_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56414.1\|1394189_1395449_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293818
CP023864.1\|AUI56405.1\|1377610_1378591_+\|MCE-family-protein	unknown	unknown	gnl\|CDD\|224380
CP023864.1\|AUI56404.1\|1376320_1377598_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
CP023864.1\|AUI56412.1\|1392284_1392548_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56411.1\|1388552_1389149_-\|nicotinamide-riboside-transporter-PnuC	unknown	unknown	gnl\|CDD\|377432
CP023864.1\|AUI56413.1\|1393317_1394193_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56409.1\|1384584_1385907_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370821
CP023864.1\|AUI56726.1\|1389541_1391926_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
CP023864.1\|AUI56410.1\|1386260_1387145_+\|SusF/SusE-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|99888
CP023864.1\|AUI56408.1\|1382125_1384585_+\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|183088
CP023864.1\|AUI56416.1\|1397077_1397644_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|277325
CP023864.1\|AUI56407.1\|1381618_1381957_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56419.1\|1399397_1400153_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|225107
CP023864.1\|AUI56417.1\|1397691_1397880_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56421.1\|1401463_1402756_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274955
CP023864.1\|AUI56418.1\|1398637_1399387_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366360
CP023864.1\|AUI56725.1\|1387254_1387878_-\|thiamine-diphosphokinase	unknown	unknown	gnl\|CDD\|153431

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56414.1\|1394189_1395449_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293818	cd07732, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Includes functionally uncharacterized Enterococcus faecalis EF2904. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	3.54841e-40
CP023864.1\|AUI56415.1\|1395941_1396727_+\|hypothetical-protein	gnl\|CDD\|335247	pfam03167, UDG, Uracil DNA glycosylase superfamily.	0.00271217
CP023864.1\|AUI56406.1\|1378968_1380375_+\|chromosomal-replication-initiator-protein-DnaA	gnl\|CDD\|273037	TIGR00362, DnaA, chromosomal replication initiator protein DnaA. DnaA is involved in DNA biosynthesis; initiation of chromosome replication and can also be transcription regulator. The C-terminal of the family hits the pfam bacterial DnaA (bac_dnaA) domain family. For a review, see Kaguni (2006). [DNA metabolism, DNA replication, recombination, and repair].	5.25454e-162
CP023864.1\|AUI56405.1\|1377610_1378591_+\|MCE-family-protein	gnl\|CDD\|224380	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism].	3.90972e-14
CP023864.1\|AUI56404.1\|1376320_1377598_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	2.03276e-59
CP023864.1\|AUI56411.1\|1388552_1389149_-\|nicotinamide-riboside-transporter-PnuC	gnl\|CDD\|377432	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter. Members of this family are integral membrane proteins that are involved in transport of nicotinamide mononucleotide.	1.03138e-48
CP023864.1\|AUI56409.1\|1384584_1385907_+\|hypothetical-protein	gnl\|CDD\|370821	pfam10117, McrBC, McrBC 5-methylcytosine restriction system component. Members of this family of bacterial proteins modify the specificity of mcrB restriction by expanding the range of modified sequences restricted.	1.88253e-26
CP023864.1\|AUI56726.1\|1389541_1391926_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.88788e-19
CP023864.1\|AUI56410.1\|1386260_1387145_+\|SusF/SusE-family-outer-membrane-protein	gnl\|CDD\|99888	cd05814, CBM20_Prei4, Prei4, N-terminal CBM20 (carbohydrate-binding module, family 20) domain. Preimplantation protein 4 (Prei4) is a protein of unknown function that is expressed during mouse preimplantation embryogenesis. In addition to the N-terminal CBM20 domain, Prei4 contains a C-terminal glycerophosphoryl diester phosphodiesterase (GDPD) domain. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific recognition of appropriate regions of starch.	2.10893e-05
CP023864.1\|AUI56408.1\|1382125_1384585_+\|restriction-endonuclease	gnl\|CDD\|183088	PRK11331, PRK11331, 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional.	2.2197e-24
CP023864.1\|AUI56416.1\|1397077_1397644_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|277325	cd07379, MPP_239FB, Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.39684e-42
CP023864.1\|AUI56419.1\|1399397_1400153_-\|DNA-binding-response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	9.24526e-16
CP023864.1\|AUI56418.1\|1398637_1399387_+\|hypothetical-protein	gnl\|CDD\|366360	pfam00899, ThiF, ThiF family. This domain is found in ubiquitin activating E1 family and members of the bacterial ThiF/MoeB/HesA family. It is repeated in Ubiquitin-activating enzyme E1.	1.99877e-41
CP023864.1\|AUI56421.1\|1401463_1402756_+\|hypothetical-protein	gnl\|CDD\|274955	TIGR04064, rSAM_nif11, nif11-like peptide radical SAM maturase. Members of this family are radical SAM enzymes that occur co-clustered with nif11-related ribosomal natural product (RNP) precursors described by TIGRFAMs model TIGR03798. Homology within the bacteriocin family reflects largely constraints on the leader peptide, tied to processes such as cleavage and export, and members associate with various families of maturation enzyme. The gene symbol assigned is nlpM, for Nif11-class Leader Peptide family Radical SAM Maturase. [Cellular processes, Toxin production and resistance].	1.20243e-34
CP023864.1\|AUI56725.1\|1387254_1387878_-\|thiamine-diphosphokinase	gnl\|CDD\|153431	cd07995, TPK, Thiamine pyrophosphokinase. Thiamine pyrophosphokinase (TPK, EC:2.7.6.2, also spelled thiamin pyrophosphokinase) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamine) to form the coenzyme thiamine pyrophosphate (TPP). TPP is required for central metabolic functions, and thiamine deficiency is associated with potentially fatal human diseases. The structure of thiamine pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis.	2.18958e-39

>CP023864.1|AUI56726.1|1389541_1391926_-|TonB-dependent-receptor
MKRIILFTAALTCVASLRAQTVTDTLKQQHLDEVVVAGVRAPKSAPYAVSNIKKAELEAFSKSGRELPFLLSQTPGVLAWGENGLGTGTAAMRIRGAAGSRINITLDGVALNSPEDQTVFWANMNSYASLMSSVQIQRGIGTSTNGDGAFGGSVSLATSAPSTKPSVEVSGSYGSYHTYNTGVKFSTGLLFNHLIFDGAYHETATDGYVHGTSGRSGSYYGGLTWLGDNFRISYKNIGNFEKTGQAWNGVVTGSNDLSLMDGTYGSKTGITTYKDMYERGLGKFNQLYEYLQTDANGAFVKDGNGNYETARYTMRDGSFWNKTTDNFYQNHNLLSFAFHPSEHWSHNITLHYTYGYGYYSELKPKTKFAKFGLTFTDSNGNFVKKSDFVRLKGLSQHTYGIVYTSNYKDESWDVTGGLNLQQFRGSHFGYLTYIKNEEADALYRTGGKDYKYYDSKAHKYDYSGFFKAKYNFADYWNVFMDLQIRHVEYMTDGQNDRFYKVANGYKNQLLDISERYDFVNPKAGVSYYRAGHKAYASIAYANREPERNNFTNNGSYPAPSPERMMDIEMGYQYNGHNWRAGVNLYYMDYNNQFVQTGAQSDIGENLTTNIKDSYRMGAELEAGWSPLSWLTVEGNAALSRNIIKDFDEMASVDWESSFRKIHYNHSTLAFSPSAILNGMLTLHYKGLEAIWHTNFVSRQYLDNTENRTRSLPCYSQTNVNLSYTLHPSRLIAGMREAVFGLNLNNIFNRHYAASGWVYSSILDHDGHPNENRYTQIGFIPMAGFNMMGSVTLKF
>CP023864.1|AUI56411.1|1388552_1389149_-|nicotinamide-riboside-transporter-PnuC
MTLDMLGCLVGLIYIYQEYKASIWLWLTGIIMPVIYMFVYYEAGLYADFGMQIYYTLAAIYGFLYWRFGRKKGAEEIPITHYPRRLTLPSLLVFFLLWGVLYLLLIRFTNSTVPVLDSFGNALSFIGLWALAKKYIEQWWIWIVVDAELAALYLYKGIPFTAVLYALYAVIAVAGYFKWKREAASLNRSRGSANGDLP
>CP023864.1|AUI56725.1|1387254_1387878_-|thiamine-diphosphokinase
MLAAGDFPNHVLPLRILRTAKNLIVCDGALEELLDYEIAPTAVVGDGDSLSEELKQRYAHIYHPISEQEFNDLTKATLFARSHLKMDASTHTRPRFCYLGATGKREDHTLGNISLMLYYYRQLAIDPVMITDYGYFVAASGSMRFASYPGQQVSIFNATCKELSSSGLKWDIYPFSELWQGTLNEALSSEFTVHADGDYLLYRTHKV
>CP023864.1|AUI56410.1|1386260_1387145_+|SusF/SusE-family-outer-membrane-protein
MGLKTFTKSMLCCALYVVGALTAHAADRLVIVGDATWGGWNLSQSTVMQKSDENADVFKATVHLDANKEFKFLTELAFGKLEYRAGAGPVTLQSGVEAPLVSSEDEPTDGKFFVSESANYDIVCNLAEKTVVVTKATYQATALKHTALWMIGSATKGGWSIGEGTVMKQDATNPAKFSARTELKLGELKFGTNIYAGFDQMFYLRDVTDEGKIVFGGNDNKWNFTEEATYDVTVDVAAMTVSFTKVDPTAINAVETTSEAPARYYTLGGMQVEKPHAGVYVKRQGGKTVKVMIK
>CP023864.1|AUI56409.1|1384584_1385907_+|hypothetical-protein
MRVVQLQEQLLENTCLRQSECEAILPCMDDGAEVVCTVRRGREEKELCLRLTRESDVVRATGSYFVGVDWIKEEDVAVQVSPKLNDGFEIDYVRMLNEALTETDNYKHLKDLLTIHFEKPSIRISQQQDLLSIFLITEYLNILHRIVRKGLKRSYYRVEETLNNKVKGRIQVGRTIQRSLAKGRITDNVCRYQVYDIDSPENRILKKALAFCRKQVGGYRNTLDTSVLERKIRQIKPYFERVSDEISVKSMRTFKGNPVYKEYYTAVEYAQLLLRRFSYDITLAGKKEIDTPPFWIDMSKLFELYVYSKLRAVFTGRKEVQYHVKEHRQELDYLLKPAKWAEPYVVDAKYKPRYGKGGGITIDDAREVSGYARLSWVYSKLDLDANAVAPIKCLIIYPDQKQEERFTFTRTTEPQFEKVSGYVRFYKVGIKLPVIASKNP
>CP023864.1|AUI56408.1|1382125_1384585_+|restriction-endonuclease
MAIKTLYKTVNTNGDYSCGDIGITTAEWLDILRDERSMPYHEALLCFLRQDGNMATCTKVSKEYGKPAQYYNNKVYNFSKWVQRRLNRFRVVGPDNKETYWCIAMKKGRETRQGFLWQMRDELVDAFRVYLMEELIDIFEKEKLFIEYGEYYKWDLLDRVEGKEVLKVFDSLRGENIVDNPRVDTVIKYLVDNEADKTSVCCQHLINESVPLTTRLAAFKSDIEALCSGKWKNNANDERTAAALLTCVYPEKYTFYKDEIYRNIWRYFGYTPRKVGEKYGHFMELINGFVEHYGEEIQQIMLKEIERFKNKPLNLAVQTLFWCMKDYMQDKLDKKMNTDTNNSSKSTRYDDIVGIWRRRKNIVLHGAPGTGKTYDIPELAVRLCDPSFMSKGRSREEIVKRYNQLKDDERLTFTTFHQSLDYEDWIEGLRPVVNETSQVTYEIENGVFKRLCEAAERSKLEGNQYGISSKSDVWKVSLKRTGDNDVRKDCMENDYIRIGWDEYGDDVSDETDGSIRNDKGKLILDAYINKMKVGDIVMSCYSSKEIDAIGVITGDYRYDESLPAYKRIRPVHWLIKGKRENIVERNGGKEMVESTVYHLNSISLEDVEAILEKYGVFIEQKEDDKPYVMVIDELNRGNVSKVFGELITLLEADKRKGSKNEESVKLPYSKKSFHVPDNVYLIATMNTADRSLGSLDYAIRRRFAFIAERPIGLEDDRFNAELFEKVSRLFVKNFDEYKASGWDATMRLLPADTLCDEYKPEDVWIGHSYFLMQDEEGVDNSRERILYELIPLLEEYVRDGVLTADAQAVIDELYKQATA
>CP023864.1|AUI56407.1|1381618_1381957_+|hypothetical-protein
MKTFDFHYSVREVDGKEFELIECTTWPRLNVQVLHTTPERFEADLKEVKSRSLCGYSLQDKTFILKHAGGEGNGELTQANIDEIYDGMQAIMQAAVKWWIQNRKKLTTSEKE
>CP023864.1|AUI56406.1|1378968_1380375_+|chromosomal-replication-initiator-protein-DnaA
MNASPKTLWDSCLQLIKENVTEQQFDTWFRPIVLQSYKPASKTLLVQVPSQFVYEYLEGHYVDLLRKVLTRVFGQGVQLTYRVLVDQENHLSQDLEQDTIEDVASQRPTARANQSPTVLDTVPQDLDSQLDPHKSFSNYVEGDSNKLPRSIGLSIAEHPNTTQFNPMFIYGPSGCGKTHLINAIGLKAKQLYPQKRVLYVSARLFQVQYTDSVRQNTTNDFINFYQTIDVLIVDDIQEWVTATKTQDTFFHIFNHLFRNGKRIILASDRPPVDLKGMNDRLLTRFSCGLIAELEKPNVQLCVDILHSKIKRDGLNIPEDVVRFIAETANGSVRDLQGVINSLLAYSVVYNSNIDMRLAERVIKRAVKIDDEPLTIDDILDKVCSHYNVTMTAVNSRSRKKDIVMARQVSMYMAQKYTKMPASRIGKLVGNRDHSTVIHSCSKIEDRLKVDKGFHAELASIENLFKLKA
>CP023864.1|AUI56405.1|1377610_1378591_+|MCE-family-protein
MKKVFTPQVKIAVVALLAIVVLFFGIQFLKGLSLFSNDAHYRIKFNDITGLSTSTPVYARGFKVGVVRDIDYNYDKLGESITVDIDVDKTMKVPEGTTAEIISDIMGNVKVVLKLGDSKKLLAANGWIDGCINDGTLGDIKGMVPAIQKMLPKVDSILGSVNSLLADPALRTSLHNVEDITTNLTTTSRELNQLLAQANGALPTVVGKAGRVMDNANGVMLNANKGITEARGAIRGANTMMGNLNNKVNELDIATTMAKVNATIDNMNAFTAKLNSNEGTLGLMLNDANLYNNLNNTVRTADSLLTNVKAHPKRYVHFSLFGRKDK
>CP023864.1|AUI56404.1|1376320_1377598_+|N-acetylmuramoyl-L-alanine-amidase
MFKKISLLFVFLVMFAGLTWAADGRFTLVIDPGHGGHDAGAIGAISKEKDINLNIALAFGRYVERNMPDVNVIYTRKSDVFIPLHQRADIANKAKADLFVSVHTNSVASGRYVKGFQVYTLGMHRAKDNLDVAKRENSVISMEKGYQQTYQGFDPNSSESYIMFEFMQNANMERSVELARMIQNAVCSSAGRIDKGVHQAGFLVLRESYMPSCLIELGFITAADEEEYLNSPEGIDAMARGIYNAFVQYKNKYDTRIVVPYRPVENKKIVIDRVIPTAPVDKPRTVVPTERRQTVSQTEKPRRMSKVEEAKKRISAAIKDLLPTCDDRTTAQASVPVFKIQVMASNKQLRAGSPLFRGRTDINCTQEGNYYKYTVGSSTNYNEIARMRNNLLKDFPQSFIIAYKDGSRMDVNQAISEFLRNKKNK
>CP023864.1|AUI56412.1|1392284_1392548_+|hypothetical-protein
MISYRGIGVSQRSYQDTSSEVGVTSVITPLPSGEGKGEGPLTNRGISVITPLPSGEGKGEGPLTNMGNLGDYAPPFGGGEGGGAANQ
>CP023864.1|AUI56413.1|1393317_1394193_+|hypothetical-protein
MRTITDEHLQAYQEGGCLQKLFDVIKEDPALSFEIRMNNKVMIYYHKDRILTISYCKGKPSIDTLSEKYYKNATPPSVSFEDGDLIQTLRDKSLLRQYFREAKRLVGSYKEGVEFEVQQNIALGNRSFSNRFVVVDMEWQLPQSDIKKEERISRTRIDLVVVDMKRNERGENDIYLGELKVGMDATDGKSGIVDHIKKTNKLICSPKACAVLRADVEGIIRQKAALGLLEGDYAGLNLSATPRMMLILACRGSKERQALEKQVEKEQDKAKASGMAMPLIVWHNVQIILDV
>CP023864.1|AUI56414.1|1394189_1395449_+|MBL-fold-metallo-hydrolase
MMKIKIHRGLDQIGGCITEIWTESSRVFIDFGQNLPGNGKPTTPEEDALMVADIVENNEKEHQAVFYTHAHEDHVGLFPYIPFDQFISEGGKDLLLIKYKTLLEGYEIAREKCGKQRAPDRSEEERLEECCRRTKTLIDKLETFRTWKRTGRGDYPNPIMVGNIRITPFFCCHSIYDAHMFLIEAEGQRFWHTGDYRGHGYMSKGQFLMLRKYATNIDVLITEGTMLSREDKAISEYRVSMEMIDVMQAFKYVFVLASGTDIERLGSINHATKKTKKPLCIMSLFMKRMMELFTEREGNLGRGLFSFSPLFYTDRLYSKLRDKGFTMVVGPSQGDKVKPLLNRLPQEETILIYSSWNGYYMREEQVRANAKYKEFREMFHNVVDIHTSGHVDRDAIKKVIGMMHPKEVICIHKEADARL
>CP023864.1|AUI56415.1|1395941_1396727_+|hypothetical-protein
MAAMNDEVKKWAEKYVPKFNELSKKYQTAYYTQSPLNVVEGNVDTMVIGINPKGCLGGGERVFDSADDYLKGNPTWAKRFLADGSINPDWKKFLAGSHTFLGYDHFYHPESIDNDQRTVWTNLSPFVSANGHKDLYKELMTEGVKSTLELIEIVKPKYIVLLGKNAFMALKENSGASDTAIEYTHVFSNRAAQIGRIYKIPAVCVVHPSRQWEVSNKFIPAFIFLHKMSEMTNRRNKMFPLNVVADNMRREMRLWQDRVII
>CP023864.1|AUI56416.1|1397077_1397644_+|serine/threonine-protein-phosphatase
MRILQISDTHNRHQRLTSMPAADVLIHCGDFTDMGTEEEVLDFLNWYISLPYSHKIFIVGNHDLCLWEADGIEDLPDNVHFLQDRGCEIEGVKFFGLGYNHPECLIPMGIDVLVTHEPPIMILDESNNTHWGNSPLRSQVMRTKPKYHLFGHVHSAYGIEKHEDIVFSNGSSLDDYYEVCHSPRLITL
>CP023864.1|AUI56417.1|1397691_1397880_-|hypothetical-protein
MQIKVNIRSLLGRKQRSQVARSFLNRYLFTFTNKVTSLFSIRYILTIIFFGNFNLCDTRPQR
>CP023864.1|AUI56418.1|1398637_1399387_+|hypothetical-protein
MEKRYSRNRLYVSEREQSIIKDYKIFLGGAGIGSIIAECALRFGFEHITIVDGDKVEESNLNRQNYTENDIGRYKAECLAERLLNINPNAQIDYHTEFLNLDNIEEMLNGHNVAINALDFKDKTPFVFDEICKERKIPVLHPYNFGWAGFVTIVDPWGHSLSELTEEPKGFELKVAEYVTGHGAFWNQPKEWLEKIVTQYKKENEMLPPPQLSIASWIAAGLCTTAMYNLATGKPVNYFPKFYLSLLLP
>CP023864.1|AUI56419.1|1399397_1400153_-|DNA-binding-response-regulator
MTDIKDFFIASNTVRNAPDYDSNVLSTLAQTVEAFARVTYQSVYLIDYYRQEFLYVSDNPLFLCGHTAKEVKELGYSFYLEHVPEEELKMLVELNKSGFKFFDTFDNVDKYQCSMSYHFHLKSGTKSKLINHQLTPILLTDEGKIWIGMCVVSLSSHKTVGHVEFHKKGNLNYWKYSFEGHRWKECDGISLKEEELEVLRLSAAGLTMTEIANRMCRSLDSIKTYKRHAFDKLGVTNITEAISRATLNKLF
>CP023864.1|AUI56420.1|1400343_1400973_+|hypothetical-protein
MEKQIATFKDYAIFMADKTSLLEIAQFVVKENYSHHLSSFTEEEINKDIKSVLEEEEYLYDNKSRIYIARDYLGKMIGCIRSFHWDKHKTLPIEKIYGINPLNAIHQESKYSFWHIGRFAVAKDSGISTLTLFKRLMALAVKPIVEDKYSYMIAEIDSKLLKVMKVLGFGTRQIGKSIDYLTSETVPVCSSKRGVMGFFSKYGELCKVA
>CP023864.1|AUI56421.1|1401463_1402756_+|hypothetical-protein
MRSTRYKELEVEDKKFIYNDLSMSLISMKSSSEKLDSKKMKSILGAPCIETKVNNTEPHRDINRITLCVSNNCNLRCKYCYAQGGDYGAVRSLMTIDTAKSFISFCKSNFDSINKIVFFGGEPLLNEKVIDFVCKEITNMYRGEKLKTPKFCIVTNGTILNPVLLGVIRKYISSITVSIDGPETIHNFNRIRANGKGSYSSVVNFIAEIKKIKTIELSYEATFTQKAIKEGFDHMKLKQYLKSSFGISGAIVNDSHLDKGYALSYIDSITREQMRESEFRCLPTEFWNILEHLIKKNNNLFCNVGFNNISVSVNGEIYGCHLLNEKSNCSLGNIAGANLYTDMQKFKYAISHVNKENQDCVNCWCRNLCGGCTVECFYDEKKGCFTNRPQKEFCEFRQEYIKKILTLLVVIRTDEPLWRLLINSLNGKEL

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Crispr_ID: CP023864_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_23

1495046-1498318

Unclear

Consensus_repeat	Method
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CRISPRCasFinder
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	PILER-CR

42 spacers

cas2,cas1

The CRISPR arrays of CP023864_23

>merge|CP023864|23|1495046-1498318|CRISPRCasFinder,PILER-CR
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACATGTCTGGCCGTCCTCTGCCGAACGACATTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACTTTCACAAAAAGAGTCCCACCGATAGCAGGGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACTTACATCTTCCTCGGTGGTGTTATCAGTCCGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACAATGAGGACAATACCGTTCAGACTACTCCTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACAGTTTGTGCAAGAAAAAAGCGTATTATTTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACAGAACCTTAATATTGAAAAAACGTAGTTCGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACTAATATTGTTACTACATTCCAGTCTGTTATGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACCCATAGCGATAGCACCTTAAAGCGTAGCGGGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACGGTTTTTGGATCTTCGACCCGAACTTTTTTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACGTGTTTTTCAGGCATATAAATTCTTTATCTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACAGCGATCTTAGTACATTCAATCGCTTCATGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACCTAAAAAACATTCCTTATTTGTTATATCTAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACTCGCATGTGCATAAATGGTATTTACTGTAAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACCAGCTCTCTGTGACTGCTGGTATACTTATAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACATTTCCTTGCGAAGCATAACAAGGGGTATAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACAGAGGTACTGGTCAAGCTCTCGGCTCTCGTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACGCATGACAGCTATCTATGCAGATAGCAGCGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACCATGCTATTAAGTCACCCATTGCTAGGCTAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACACAATCAGAGACATAATACAGGGAATTTAAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACGCATACTCAGCCTGTATGTTTGATATTGCAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACCGCTTTGTAACTCATCCTACTCTAAGATTTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACAAAACATCTTTGGGTACAAAAAGAGAAAGTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACCAATTAGTCAAGATACATTTAGGGGATTCTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACTATGGATGATTTCCGTCAACTCGTCCGAAAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACACTTGTGCATGGCCTGTATGAGCAAGATTAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACATGGCTTGTATGAAGATGACTTCCATGCTAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACAGTCTATGACTAAGGGTGAGAGTGTTGTAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACTTGCCAAGATTGGCGGATTGATAATTGACGGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACTAAGTCAAAGTAACAAATAAAGAGTAACGAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACTACTTTTGCTTGACATGAAAACAATAGATTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACTCACGAGAAGAAACACTACCATCTGTTAAGGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACTCGATAGAAGTGAGAGTTTTAAGAGTAGAGGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACTATCGCAAAGTAGTTTCACGCTGTTTTGCAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACAAGCATTCGCTACTGATGCTTCTGTACGTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACAAGGGTCTTCTTCGCAAGTGCATCCTTCAAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACATTCTGAAAGAAGATTAGATAAACAACCAGGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACACTCTGGTGCTAAAGTAGCTGCTAATAGTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACCTGCTGACGCTCAAGATGACTTCATGAGTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACAACGGCACAGGTCAAGCACTTGGTTCTCGTGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACAAATTCCTGTTCTGTTTGAGTATCACCGCAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACAAATTCCTGTTCTGTTTGAGTATCACCGCAGTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAACTCTTCGTCGTCGTCAGCTAACTGTTGTCCCGTTGTTATTGATACCACAAAGGTAAAACTTTTCAAGCAAATCACAAC

>CP023864|23|20|1495046-1498318|CRISPRCasFinder
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	ATGTCTGGCCGTCCTCTGCCGAACGACATT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TTTCACAAAAAGAGTCCCACCGATAGCAGG
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TTACATCTTCCTCGGTGGTGTTATCAGTCC
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AATGAGGACAATACCGTTCAGACTACTCCT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AGTTTGTGCAAGAAAAAAGCGTATTATTT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AGAACCTTAATATTGAAAAAACGTAGTTC
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TAATATTGTTACTACATTCCAGTCTGTTAT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CCATAGCGATAGCACCTTAAAGCGTAGCGG
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	GGTTTTTGGATCTTCGACCCGAACTTTTTT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	GTGTTTTTCAGGCATATAAATTCTTTATCT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AGCGATCTTAGTACATTCAATCGCTTCAT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CTAAAAAACATTCCTTATTTGTTATATCTA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TCGCATGTGCATAAATGGTATTTACTGTAA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CAGCTCTCTGTGACTGCTGGTATACTTATA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	ATTTCCTTGCGAAGCATAACAAGGGGTATA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AGAGGTACTGGTCAAGCTCTCGGCTCTCGT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	GCATGACAGCTATCTATGCAGATAGCAGC
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CATGCTATTAAGTCACCCATTGCTAGGCTA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	ACAATCAGAGACATAATACAGGGAATTTAA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	GCATACTCAGCCTGTATGTTTGATATTGCA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CGCTTTGTAACTCATCCTACTCTAAGATTT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AAAACATCTTTGGGTACAAAAAGAGAAAGT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CAATTAGTCAAGATACATTTAGGGGATTCT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TATGGATGATTTCCGTCAACTCGTCCGAAA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	ACTTGTGCATGGCCTGTATGAGCAAGATTA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	ATGGCTTGTATGAAGATGACTTCCATGCTA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AGTCTATGACTAAGGGTGAGAGTGTTGTA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TTGCCAAGATTGGCGGATTGATAATTGACG
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TAAGTCAAAGTAACAAATAAAGAGTAACGA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TACTTTTGCTTGACATGAAAACAATAGATT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TCACGAGAAGAAACACTACCATCTGTTAAG
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TCGATAGAAGTGAGAGTTTTAAGAGTAGAG
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TATCGCAAAGTAGTTTCACGCTGTTTTGCA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AAGCATTCGCTACTGATGCTTCTGTACGT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AAGGGTCTTCTTCGCAAGTGCATCCTTCAA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	ATTCTGAAAGAAGATTAGATAAACAACCAG
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	ACTCTGGTGCTAAAGTAGCTGCTAATAGT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CTGCTGACGCTCAAGATGACTTCATGAGT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AACGGCACAGGTCAAGCACTTGGTTCTCGT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AAATTCCTGTTCTGTTTGAGTATCACCGCA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AAATTCCTGTTCTGTTTGAGTATCACCGCA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TCTTCGTCGTCGTCAGCTAACTGTTGTCCC
GTTGTTATTGATACCACAAAGGTAAAACTTTTCAAGCAAATCACAAC

>CP023864|23|3|1495430-1498318|PILER-CR
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AGAACCTTAATATTGAAAAAACGTAGTTC
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TAATATTGTTACTACATTCCAGTCTGTTAT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CCATAGCGATAGCACCTTAAAGCGTAGCGG
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	GGTTTTTGGATCTTCGACCCGAACTTTTTT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	GTGTTTTTCAGGCATATAAATTCTTTATCT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AGCGATCTTAGTACATTCAATCGCTTCAT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CTAAAAAACATTCCTTATTTGTTATATCTA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TCGCATGTGCATAAATGGTATTTACTGTAA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CAGCTCTCTGTGACTGCTGGTATACTTATA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	ATTTCCTTGCGAAGCATAACAAGGGGTATA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AGAGGTACTGGTCAAGCTCTCGGCTCTCGT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	GCATGACAGCTATCTATGCAGATAGCAGC
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CATGCTATTAAGTCACCCATTGCTAGGCTA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	ACAATCAGAGACATAATACAGGGAATTTAA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	GCATACTCAGCCTGTATGTTTGATATTGCA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CGCTTTGTAACTCATCCTACTCTAAGATTT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AAAACATCTTTGGGTACAAAAAGAGAAAGT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CAATTAGTCAAGATACATTTAGGGGATTCT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TATGGATGATTTCCGTCAACTCGTCCGAAA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	ACTTGTGCATGGCCTGTATGAGCAAGATTA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	ATGGCTTGTATGAAGATGACTTCCATGCTA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AGTCTATGACTAAGGGTGAGAGTGTTGTA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TTGCCAAGATTGGCGGATTGATAATTGACG
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TAAGTCAAAGTAACAAATAAAGAGTAACGA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TACTTTTGCTTGACATGAAAACAATAGATT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TCACGAGAAGAAACACTACCATCTGTTAAG
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TCGATAGAAGTGAGAGTTTTAAGAGTAGAG
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TATCGCAAAGTAGTTTCACGCTGTTTTGCA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AAGCATTCGCTACTGATGCTTCTGTACGT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AAGGGTCTTCTTCGCAAGTGCATCCTTCAA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	ATTCTGAAAGAAGATTAGATAAACAACCAG
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	ACTCTGGTGCTAAAGTAGCTGCTAATAGT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	CTGCTGACGCTCAAGATGACTTCATGAGT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AACGGCACAGGTCAAGCACTTGGTTCTCGT
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AAATTCCTGTTCTGTTTGAGTATCACCGCA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	AAATTCCTGTTCTGTTTGAGTATCACCGCA
GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC	TCTTCGTCGTCGTCAGCTAACTGTTGTCCC
GTTGTTATTGATACCACAAAGGTAAAACTTTTCAAGCAAATCACAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56492.1\|1484578_1484767_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56493.1\|1486656_1486893_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56502.1\|1508305_1508830_-\|flavin-reductase	unknown	unknown	gnl\|CDD\|224766
CP023864.1\|AUI56499.1\|1498896_1499484_+\|DUF417-domain-containing-protein	unknown	unknown	gnl\|CDD\|225601
CP023864.1\|AUI56494.1\|1486953_1487223_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56496.1\|1488566_1489514_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
CP023864.1\|AUI56491.1\|1482977_1483994_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56504.1\|1511502_1512825_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224031
CP023864.1\|AUI56495.1\|1487297_1488002_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371293
CP023864.1\|AUI56740.1\|1507819_1508257_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56500.1\|1504935_1506093_+\|ATPase	unknown	unknown	gnl\|CDD\|369347
CP023864.1\|AUI56497.1\|1492694_1493627_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
CP023864.1\|AUI56503.1\|1509997_1510429_+\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|133478
CP023864.1\|AUI56498.1\|1493633_1493975_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
CP023864.1\|AUI56501.1\|1506165_1507455_+\|histidine-type-phosphatase	unknown	unknown	gnl\|CDD\|182284
CP023864.1\|AUI56505.1\|1512828_1513482_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379341
CP023864.1\|AUI56490.1\|1482486_1482966_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56738.1\|1500805_1503832_+\|flagellar-protein-FliS	unknown	unknown	gnl\|CDD\|377618
CP023864.1\|AUI56739.1\|1503995_1504787_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239491
CP023864.1\|AUI56737.1\|1485294_1485657_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|239942

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56503.1\|1509997_1510429_+\|transcriptional-repressor	gnl\|CDD\|133478	cd07153, Fur_like, Ferric uptake regulator(Fur) and related metalloregulatory proteins; typically iron-dependent, DNA-binding repressors and activators. Ferric uptake regulator (Fur) and related metalloregulatory proteins are iron-dependent, DNA-binding repressors and activators mainly involved in iron metabolism. A general model for Fur repression under iron-rich conditions is that activated Fur (a dimer having one Fe2+ coordinated per monomer) binds to specific DNA sequences (Fur boxes) in the promoter region of iron-responsive genes, hindering access of RNA polymerase, and repressing transcription. Positive regulation by Fur can be direct or indirect, as in the Fur repression of an anti-sense regulatory small RNA. Some members sense metal ions other than Fe2+. For example, the zinc uptake regulator (Zur) responds to Zn2+, the manganese uptake regulator (Mur) responds to Mn2+, and the nickel uptake regulator (Nur) responds to Ni2+. Other members sense signals other than metal ions. For example, PerR, a metal-dependent sensor of hydrogen peroxide. PerR regulates DNA-binding activity through metal-based protein oxidation, and co-ordinates Mn2+ or Fe2+ at its regulatory site. Fur family proteins contain an N-terminal winged-helix DNA-binding domain followed by a dimerization domain; this CD spans both those domains.	4.18935e-34
CP023864.1\|AUI56502.1\|1508305_1508830_-\|flavin-reductase	gnl\|CDD\|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	3.08998e-16
CP023864.1\|AUI56499.1\|1498896_1499484_+\|DUF417-domain-containing-protein	gnl\|CDD\|225601	COG3059, COG3059, Predicted membrane protein [Function unknown].	2.2322e-59
CP023864.1\|AUI56496.1\|1488566_1489514_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.10285e-71
CP023864.1\|AUI56505.1\|1512828_1513482_+\|hypothetical-protein	gnl\|CDD\|379341	pfam13707, RloB, RloB-like protein. This family includes the RloB protein that is found within a bacterial restriction modification operon. This family includes the AbiLii protein that is found as part of a plasmid encoded phage abortive infection mechanism. Deletion within abiLii abolished the phage resistance. The family includes some proteins annotated as CRISPR Csm2 proteins.	8.14181e-20
CP023864.1\|AUI56504.1\|1511502_1512825_+\|hypothetical-protein	gnl\|CDD\|224031	COG1106, COG1106, Predicted ATPases [General function prediction only].	5.04234e-18
CP023864.1\|AUI56495.1\|1487297_1488002_-\|hypothetical-protein	gnl\|CDD\|371293	pfam10902, WYL_2, WYL_2, Sm-like SH3 beta-barrel fold. WYL_2 is a family of Sm-like SH3 beta-barrel fold containing domains. WYL is named for three conserved amino acids found in a subset of domains of this superfamily. These residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	1.81641e-23
CP023864.1\|AUI56500.1\|1504935_1506093_+\|ATPase	gnl\|CDD\|369347	pfam07396, Porin_O_P, Phosphate-selective porin O and P. This family represents a conserved region approximately 400 residues long within the bacterial phosphate-selective porins O and P. These are anion-specific porins, the binding site of which has a higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates, while porin P has a higher affinity for orthophosphate. In P. aeruginosa, porin O was found to be expressed only under phosphate-starvation conditions during the stationary growth phase.	3.82888e-16
CP023864.1\|AUI56497.1\|1492694_1493627_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.31267e-111
CP023864.1\|AUI56498.1\|1493633_1493975_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	4.36118e-28
CP023864.1\|AUI56501.1\|1506165_1507455_+\|histidine-type-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	5.22147e-115
CP023864.1\|AUI56738.1\|1500805_1503832_+\|flagellar-protein-FliS	gnl\|CDD\|377618	pfam06160, EzrA, Septation ring formation regulator, EzrA. During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation.	0.000727341
CP023864.1\|AUI56739.1\|1503995_1504787_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239491	cd03397, PAP2_acid_phosphatase, PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.	3.77023e-96
CP023864.1\|AUI56737.1\|1485294_1485657_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|239942	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date oligomerize to bring together four OB folds in their active state. The majority (e.g. Escherichia coli SSB) have a single OB fold per monomer, which oligomerize to form a homotetramer. However, Deinococcus and Thermus SSB proteins have two OB folds per monomer, which oligomerize to form a homodimer. Mycobacterium tuberculosis SSB varies in quaternary structure from E. coli SSB. It forms a dimer of dimers having a unique dimer interface, which lends the protein greater stability. Included in this group are OB folds similar to Escherichia coli PriB. E.coli PriB is homodimeric with each monomer having a single OB fold. It does not appear to form higher order oligomers. PriB is an essential protein for the replication restart at forks that have stalled at sites of DNA damage. It also plays a role in the assembly of primosome during replication initiation at the bacteriophage phiX174 origin. PriB physically interacts with SSB and binds ssDNA with high affinity.	4.72521e-07

>CP023864.1|AUI56498.1|1493633_1493975_+|CRISPR-associated-endonuclease-Cas2
MSGFERFSEYRIMWILVFFDLPTETKKEKKAYTDFRKSLIKDGFTMFQFSIYVRHCASMENAEVHMRRVRALLPKIGKVGILCITDKQFANIQLFYGQKTQTPNAAGQQLELF
>CP023864.1|AUI56497.1|1492694_1493627_+|type-II-CRISPR-associated-endonuclease-Cas1
MIKKTLCFSNPIYLSLRNAQLVLHLPEVENNKTLPEAIKKEAERTIPIEDIGVVILDNRRITITSGAMETLLENNCAVITCNQKSMPVGLLLPLCGNTTQNERFRSQLEASLPLRKQLWQQTIKQKILNQEYVLRTNTDKETNCMRVWSNDVRSGDPDNLEARAAAYYWRNVFTTYPNFVRDREGVPPNNLLNYGYAILRAIIARALVGSGLLPTLGIHHHNRYNAYCLADDIMEPYRPYVDQLVLDIIQCNLEISDITRDLKMQLLGIPMLDVVINGKRSPLMIAAQQTTASLAKCFAGECKRISYPEM
>CP023864.1|AUI56496.1|1488566_1489514_+|IS30-family-transposase
MYKHLTSQQRYTIHTLLDKGESRKQIAMLIGVDTSTITREYNRNSGKHRSYNWETAQKNAELKKKRKPGNHAKSKEIKEEVIRLLETEQWSPKQISAVLRERGIIISHETIYRMIRKDKKEGGSLYTHCRHKLKHRSRPVGDCRSTISDRISISERPAEVDGVRFGDFEMDIIVGKGNKGAILTLKELSTGMLFMRKLPKGKDAKEVSKTVVRLLMPYKKFIKSITTDNGLEFANHKYITKKLGVTVYFTDPYSSWQKGAIENINGLIRQYIPKSTCFDDISHQYVAKITDKINLRPREKLNFCTPFECFYEKIL
>CP023864.1|AUI56495.1|1487297_1488002_-|hypothetical-protein
MENLFETLVDRLRRGIVSFVYRKKDGTERHACGTLYGIGHTIKGNKKHQQCKYTLAYYDVDCKGWRSFVIDNLVEVGELRKGTIEEHHDICLALVVKLKEKMKKEGVTAFAYRKTDGSIRHAHGILSDNIDITGQYFVYFDTDKQEERKFRIDAFIGIGELIEIDDTISFENETQTRSKVYNEFSRLDIKTILANKGIDIEDTENFMVIDLLPELSKEQLKDLIIKATERLANL
>CP023864.1|AUI56494.1|1486953_1487223_-|hypothetical-protein
METKIKKAILDIVKGRIDRANYGMCSKYFVCTSSLDICESNNIHITKKLEYKDTITMNGVVIGEIRYRYAAHKRNGMYKMLAPKISYID
>CP023864.1|AUI56493.1|1486656_1486893_-|hypothetical-protein
MIRYPRVLIIKRIKYIPIYQELYQVDTMRPNRPMRSKFGLSKSQANSFARQELAVLKSEGYEKAVFNSSMVDLRKFVL
>CP023864.1|AUI56737.1|1485294_1485657_-|single-stranded-DNA-binding-protein
MNNFSVTGYICKDAEVKNFDKAAIARFGIIIKHSERRGNETVTVSSILSLETWVKKEDTATLELLKKGKEVTVEGFFKPESYTKDGKNVTVLKNIATKVTACVRDKKQDGPKEEKKKKKA
>CP023864.1|AUI56492.1|1484578_1484767_-|hypothetical-protein
MPEININFINNKNMKKIEAARELLGIYNSYECRKVKLTTILRKMFREGNVWRLCGHAHDYTV
>CP023864.1|AUI56491.1|1482977_1483994_-|hypothetical-protein
MKTNYISIFLALTTCFFYSCTSHPSFKNSTEAVEACKNKLTEIQAIKDADIEKVTDLTAQWQEIQDSAYSVFSRDSTINLKSPIAMAYFVVSDSMRTELTRLAFSKQRSLQDVMYLKLNTASDRDKIKKSDTYKKASEFYAKLDDEPTIKGLPKILSVYNSLLNNTQPFTQEAQLLVFIQQEDRCFRSLMEHLSNVPVHDMQQLTEKTSRLFERLYSSVGRKSDEVNDRTMLYLTMRFNRRIMQNAIACREDILNNKKLNQQQRVSYRWMLIQPYVSIDEYSTAALTEKQREELMIISKELPTLLTRLDNQKKTKEQEDKLVNTLSDYFLKSYISSTL
>CP023864.1|AUI56490.1|1482486_1482966_-|hypothetical-protein
MEKVLNSNSLEEGTVKRSIILLYQQMIKKLPEYFSEQEINVIQHSSFSEIVVQLKEQNMLENFITSMEEKLHLHVLYATREEDGKVYKVVAYSTPVEDEMLVFYFSSTQYGLIDSMTVFIFESLETMYCHLLNERNRMTRLQKNILEQESYAKMLSHFN
>CP023864.1|AUI56499.1|1498896_1499484_+|DUF417-domain-containing-protein
MSKVNLLLDFVLNTAASLKGTGIHLIRIAIFIIFVWIGGLKFWNYEAEGIVPFVANSPFMSFFYTKKAPEYKDYKLKEGEFDKVKHDWHEANNTYTFSHGLGIAIMSFGILTLLGIWFPKIGFVGSGLVILMTFGTLSFLVTTPEVWVPDLGSGEHGFPLLTGAGRLVIKDVCILAGAVVVLADCAQRILKKNKR
>CP023864.1|AUI56738.1|1500805_1503832_+|flagellar-protein-FliS
MSALSIDKTGYWIGGETGVIWHINGDERKRYYTGLDRIYDVARDPSHPNQIWIASRNAGLQLWNIATDTLLHQLAYDIPGKGSRYSPYDITITAKHLYVATSQGLFSMPISQPQQGLTLLYPIKAASATQCCEPFLVNNLCPIDDKWLFAATQAGVISINLHTQKTELRHKGENIRKVAFYDGHLCILSDNQLTIENINGADSKHFPLPQSVLSFYKAGSTYYFITSSRILLSDNLERFVSIPLRNNVPDNPHRIAIADDGNGFSILLTKNALWRIPHHLGIFNANPPVVAACRMGNDLIYVNNQHELFRQKADELIAKKVYDFEDDELPKEMFADGEDIYYYTANNQVFRLNIGEQYLINQLFKRPQLLTQPRTRITSMALLSHENKLLLGVQDYLLSVDCRNGKTDTVKSMNNRYITAFHQSQESGKIYISTLNHGVFVSKGKQVERIAGTEHMVFVNSLCTYNSPRPRLLLLTNHYLQIQGADSIRTDGSNQIFCINDSIVYTIPEMGIHKYKIKNNRLYDCGSFFDDIHFNAQAAFSLNNTLYIGSDLGVILLTPGKEEAAKWVTFDNKAPSLQLIGIILFTMMSIIGIILFSYRRHKTLTYRQLQLSKDDLRHRLEALAGLKDRLTENEQNTLEAISNEIETINISSQSLRANNELFANLSARIARLNRDTAFQMVKFLNEQIDRIQQYEVYECSQMIHDSEEARSTDNIEIIIEQCKKNEVWLNHIQEIKERLDKFYRSTEGTLVLSGLNDGMRERLQHIQEATKQLTIAEVYSDFIVVKEQYENIFTPKGLKVICDYISASIVQLQRLKGYEEMAESLLNELQTIEKDIDNRDRIVLLRLLQTIDNRITQIKYLNTLQQLIEEYTTIHDNIKKENEERRMKKFHSKLFADIDSATRDVTDQIAQISEQFFISFATTDKEVCQEIFHFTSVNSQQVRVLILLLAMPRVKRTLLPGMLGIYGNLNPVVSRLYHSKIGDNKTLLDDYCKRNTSSIVNYITKLSE
>CP023864.1|AUI56739.1|1503995_1504787_+|phosphatase-PAP2-family-protein
MTKKTLVVGLLAMFSVTTFAQTTTKKIKDVRTQPDLYYLQDGQQASSLELLPAPPQPGSIQFLYDQAQYQWGKMQRDTPRGDQAAADARVGGDGVPNAFSEAFGIKISKETTPEIYKLVLNMREDAGDLATRSAKDHYMRVRPFAFYKEMTCNPEQQQELSTNGSYPSGHTAIGWATALVLSEINVDRQNEILERGYQMGQSRVICGYHWQSDVDAARIVSAAVVARLHADPAFQEQLAKAKKEFAKLKKEGKIAKSTFKAAN
>CP023864.1|AUI56500.1|1504935_1506093_+|ATPase
MKRIILMAACGLMACTGAFAQDEEPKLVVKPSGRILMDAGVMHSTDETLNDQLNDGVAIPDVRMGVSATYGKWKAKVDVGYARQSLSLKDISLDYNFDKENLIRMGYFVHQYGLQSGTSSSFKVSMEEPLANQAFFNSRLIGAMYVHAGDKFHATASVFAENDAMKMTTDKLGNEAWGAMTRLVWRPLTERGKIFHIGISGAYESPRYNKTAALSHKSYTLRAPFPTRIANVAAQEATISDAKALWKFSPEMNLAVGNFGLEAQYFYVGIKRDNAMPNYSAWGAYSNVRYLLKGQGYTYTKADAGIATPDPGSMELVAAYNYSTLTDKDANIYGGKVNDWSLTFNYYLNKYMIWRVRGSITRATDNAAFNNNTFSILETRLQIKF
>CP023864.1|AUI56501.1|1506165_1507455_+|histidine-type-phosphatase
MRKINSFVLLLILALLCPVLAQAQLQRSDAFKAKYKLKEVVILSRHNIRSPLSTNGSALSKMTPHEWTNWSSAASELTLRGGVLETEMGQFFRKWTIETGLFKDNYVPSIDEVNVYANSMQRCIATAQYFSSGFMPVAGLRVNHRYVPSKMDPIFFPRLTKSTPAFRSEAMKQINAMGGKEGLVGINKGLKDSYDLIAKVLDMKQSEYYKKGEVKDFTTNDTQITLELNQEPGMKGSLKNANSASDAFILQYYEEPDGMKAAFGHKLTTDDWTKIAKVKDVYGDVLFTAPIVAVNVAHPLLQYMYDELNDKDRKFTFLCGHDSNIASVDAALGVEEYSLPNSIEKKTPIGSKLVIEKWVDATGKTFIAVNLVYQSTDQLKQMSLLDLQHAPQIFSLKLKGLNQNTDGLYTFEDVNARFLQAIRAYDDIK
>CP023864.1|AUI56740.1|1507819_1508257_-|hypothetical-protein
MRHVFIFVTLLLLVACKPYGDYKERGHWRQLKENERIGFYWRHNDKIYAALGDSAVLVRYVEPMKDVDISTFYVNKTIDKESENYAKDKNHVYYPWHMIAVDADTFGYEYATELIVKGAFPSSFRYIGDGKGTDGYTMYKYGWRE
>CP023864.1|AUI56502.1|1508305_1508830_-|flavin-reductase
MKEVSYKDLKFNPFDLLGREWMLVTAGNEQDGCNTMTISWGHLGCMWGHNDPTAVTYIRASRYTKTFVDREDYFTLCVMDASFKKQMAYLGTVSGRDEDKIEKAGLTKVFADNSVYFKEAKMVLICKKEYVADLKESGFVDKDIFEQAYPEGNLHTMYVGKIEKVLVRDDEYLK
>CP023864.1|AUI56503.1|1509997_1510429_+|transcriptional-repressor
MDSVYNKLKELGIRPSVQRVAIMNYLATHHTHPTVEEVFLSLKKKLPTVSRTTVYNTLRMLSEHGAASMITIDDHRVCYDGVTEPHAHFFCKHCEKVFDFEAMEMPRYTGEIGKGFRIDDTQLYYKGICPDCLKAMSEEEGLN
>CP023864.1|AUI56504.1|1511502_1512825_+|hypothetical-protein
MILRITVENLLSFKEETQISFVAGKSDKHSEQVCRAEKRDDISVLKAGIIYGANASGKSNIIKAVDILQKIALEGVPKNEIEPFKLATLGNKPSKVEMEFKVGKKYYAYGVEFSVKGIAEEWLFETNSRSDMEVFTRKVSADGNEFTFGSFTASEEEKQLVKFISMSTPKNDSFLSEYIKRNGKGLNAITEAYRWMKENLKIIFPKTRFEGLSIRVEKDKQFAIATKSLLDYFNTGIVDIRRVRVAKENLELPKELVTDILAEAEPGKGIVVASPSNSAFYFFESEKDGTMSIYKQNTIHKGEDNREIAFEMNEESDGSIRIMDFIPMLIDLRLNETVYLIDEIDRSMHPMLSQKILEYYFGHLTADKDTQLIFSTHESNLLNLDLIRADEVWFVEKDAVGASHFTSLAEYKPREDVRKGYLQGRYGAIPFFAPINSLKW
>CP023864.1|AUI56505.1|1512828_1513482_+|hypothetical-protein
MRKRKSFERQEGIKSGRLVVIAAEGKDTENIYFEEMKASMHASGVHVEVLRRGTNESSPEEVYRQIQGFVSEYDIDEDDQLWAVVDRDKWTEKMLSEVAMKCSQNRFFNFCVSNPCFELWLILHLEDVEHYSEEDWNGLSENKKTSRNGDTWTKKRLRSLMGSYRESKYEAATLLPNIENAIARASKLDIKPDDRWPQTVGTRVYLLVNSILAKDQQ

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Crispr_ID: CP023864_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_24

1532073-1532166

Orphan

Consensus_repeat	Method
CAACACCTAACATTTAACACCTACCACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_24

>merge|CP023864|24|1532073-1532166|CRISPRCasFinder
CAACACCTAACATTTAACACCTACCACCATGGAGTTACTATGGAAGTAAGTTGAATTGCATTACACCAACACCTAACATTTAACACCTACCACC

>CP023864|24|21|1532073-1532166|CRISPRCasFinder
CAACACCTAACATTTAACACCTACCACC	ATGGAGTTACTATGGAAGTAAGTTGAATTGCATTACAC
CAACACCTAACATTTAACACCTACCACC

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56516.1\|1528478_1529699_-\|uracil-permease	unknown	unknown	gnl\|CDD\|225142
CP023864.1\|AUI56523.1\|1539582_1540215_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56526.1\|1543095_1543734_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|182251
CP023864.1\|AUI56512.1\|1521605_1523243_+\|peptidase-C69	unknown	unknown	gnl\|CDD\|335383
CP023864.1\|AUI56514.1\|1526655_1527882_+\|coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|223708
CP023864.1\|AUI56508.1\|1518021_1518702_+\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|237816
CP023864.1\|AUI56510.1\|1519659_1519887_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56741.1\|1542604_1543072_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|238612
CP023864.1\|AUI56513.1\|1524287_1526450_-\|elongation-factor-G	unknown	unknown	gnl\|CDD\|237186
CP023864.1\|AUI56518.1\|1532211_1534434_+\|dipeptidyl-carboxypeptidase-II	unknown	unknown	gnl\|CDD\|341051
CP023864.1\|AUI56525.1\|1542046_1542514_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56521.1\|1536022_1538602_+\|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl\|CDD\|225094
CP023864.1\|AUI56509.1\|1518709_1519663_+\|DUF4296-domain-containing-protein	unknown	unknown	gnl\|CDD\|379487
CP023864.1\|AUI56517.1\|1529896_1531204_+\|serpin-family-protein	unknown	unknown	gnl\|CDD\|381000
CP023864.1\|AUI56520.1\|1535203_1535788_+\|50S-ribosomal-protein-L19	unknown	unknown	unknown
CP023864.1\|AUI56524.1\|1541180_1541930_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56519.1\|1534527_1535217_+\|twin-arginine-translocation-pathway-signal-protein	unknown	unknown	gnl\|CDD\|379310
CP023864.1\|AUI56511.1\|1519950_1521588_+\|M23-family-peptidase	unknown	unknown	gnl\|CDD\|366703
CP023864.1\|AUI56515.1\|1528053_1528380_+\|Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|374902
CP023864.1\|AUI56522.1\|1538606_1539104_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56516.1\|1528478_1529699_-\|uracil-permease	gnl\|CDD\|225142	COG2233, UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism].	3.04347e-109
CP023864.1\|AUI56513.1\|1524287_1526450_-\|elongation-factor-G	gnl\|CDD\|237186	PRK12740, PRK12740, elongation factor G-like protein EF-G2.	0
CP023864.1\|AUI56512.1\|1521605_1523243_+\|peptidase-C69	gnl\|CDD\|335383	pfam03577, Peptidase_C69, Peptidase family C69.	1.00382e-81
CP023864.1\|AUI56508.1\|1518021_1518702_+\|lipoprotein-signal-peptidase	gnl\|CDD\|237816	PRK14788, PRK14788, lipoprotein signal peptidase; Provisional.	2.53176e-74
CP023864.1\|AUI56514.1\|1526655_1527882_+\|coproporphyrinogen-III-oxidase	gnl\|CDD\|223708	COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism].	8.78921e-112
CP023864.1\|AUI56741.1\|1542604_1543072_-\|nucleoside-deaminase	gnl\|CDD\|238612	cd01285, nucleoside_deaminase, Nucleoside deaminases include adenosine, guanine and cytosine deaminases. These enzymes are Zn dependent and catalyze the deamination of nucleosides. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a water molecule to form a hydroxide ion that performs a nucleophilic attack on the substrate. The functional enzyme is a homodimer. Cytosine deaminase catalyzes the deamination of cytosine to uracil and ammonia and is a member of the pyrimidine salvage pathway. Cytosine deaminase is found in bacteria and fungi but is not present in mammals; for this reason, the enzyme is currently of interest for antimicrobial drug design and gene therapy applications against tumors. Some members of this family are tRNA-specific adenosine deaminases that generate inosine at the first position of their anticodon (position 34) of specific tRNAs; this modification is thought to enlarge the codon recognition capacity during protein synthesis. Other members of the family are guanine deaminases which deaminate guanine to xanthine as part of the utilization of guanine as a nitrogen source.	1.07483e-48
CP023864.1\|AUI56519.1\|1534527_1535217_+\|twin-arginine-translocation-pathway-signal-protein	gnl\|CDD\|379310	pfam13645, YkuD_2, L,D-transpeptidase catalytic domain. This family is related to pfam03734.	2.33115e-38
CP023864.1\|AUI56518.1\|1532211_1534434_+\|dipeptidyl-carboxypeptidase-II	gnl\|CDD\|341051	cd06456, M3A_DCP, Peptidase family M3, dipeptidyl carboxypeptidase (DCP). Peptidase family M3 dipeptidyl carboxypeptidase (DCP; Dcp II; peptidyl dipeptidase; EC 3.4.15.5). This metal-binding M3A family also includes oligopeptidase A (OpdA; EC 3.4.24.70). DCP cleaves dipeptides off the C-termini of various peptides and proteins, the smallest substrate being N-blocked tripeptides and unblocked tetrapeptides. DCP from Escherichia coli is inhibited by the anti-hypertensive drug captopril, an inhibitor of the mammalian angiotensin converting enzyme (ACE, also called peptidyl dipeptidase A). OpdA may play a specific role in the degradation of signal peptides after they are released from precursor forms of secreted proteins. It can also cleave N-acetyl-L-Ala. This family also includes Arabidopsis thaliana organellar oligopeptidase OOP (At5g65620), which plays a role in targeting peptide degradation in mitochondria and chloroplasts; it degrades peptide substrates that are between 8 to 23 amino acid residues, and shows a weak preference for hydrophobic residues (F/L) at the P1 position.	0
CP023864.1\|AUI56521.1\|1536022_1538602_+\|RNA-binding-transcriptional-accessory-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
CP023864.1\|AUI56509.1\|1518709_1519663_+\|DUF4296-domain-containing-protein	gnl\|CDD\|379487	pfam14129, DUF4296, Domain of unknown function (DUF4296). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 90 amino acids in length.	8.36242e-25
CP023864.1\|AUI56517.1\|1529896_1531204_+\|serpin-family-protein	gnl\|CDD\|381000	cd00172, serpin, SERine Proteinase INhibitors (serpin) family. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.	1.78388e-71
CP023864.1\|AUI56526.1\|1543095_1543734_-\|HD-domain-containing-protein	gnl\|CDD\|182251	PRK10119, PRK10119, putative hydrolase; Provisional.	0.00015921
CP023864.1\|AUI56511.1\|1519950_1521588_+\|M23-family-peptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	2.94494e-18
CP023864.1\|AUI56515.1\|1528053_1528380_+\|Fis-family-transcriptional-regulator	gnl\|CDD\|374902	pfam16955, OFeT_1, Ferrous iron uptake permease, iron-lead transporter. OFeT_1 is a family of conserved archaeal membrane proteins that are putative oxidase-dependent Fe2+ transporters.	0.00643379

>CP023864.1|AUI56517.1|1529896_1531204_+|serpin-family-protein
MAKKLLFLPILLLLVCCTQSKKALQKLEQTVKEATTSLQPTLEDAAKKADPDYQLSKEEERLVSSSNAFSLKLFQLLANKKGKESVALSPMAVIYSLNMLNNGANGKTQAVISKALGYTADDLEDINSLSRTMLIGQRKGGIDEQNDSSGYMITANFLILNGQTKLLPDFQEVLEHDYFTNIIDNANTPKGKERANKLCKTITKGDITNLPINLTGPRAAQLFNAVTLKTAWSLPFYKELTKSMPFHCEDGRTRQVRMMMNDDTMQMYQGYNAKDYQVLLMPLQNGFSLYAILPQKKVNLQDVIRKLTVKELRKIAQSTKTYDNVNILFPCFSTSSNIPLKQLYGDMGLGSLFTHEADFSRMSAQPLAVDDVFQQISLNVNEDGISAKAIQVTHIAYLSANDNTSSFSFKADHPFLYYILDRYDNLCFMGTYMGD
>CP023864.1|AUI56516.1|1528478_1529699_-|uracil-permease
MSNLQLSPMRKTIVGVQFLFVAFGATVLVPLLVGLDPATALFTAGLGTFIFHFVTKGKVPIFLGSSFAFIAPIVYASAHWGMSGTLAGIAGVALVYFVMSALIKWQGKKLLDKLFPPVVIGPVIILIGLSLSKSAVDMAKTNWILAFISLGVAVVVLSMGRGLMKLVPVISGIVVGYLVAMYMGVVDFTNVKAAPWFALPPALAHFHLPQFSWEAFLYMIPVAIAPVIEHVGDVYVVSAVADKDFTESPGLHRTMLGDGLACLAACFLGGPPVTTYSEVTGAMSITKVTNPQVIRIAAATAIIFSIIGKLSALLRSIPPAVLGGIMLLLFGTIASVGIQNLIQHKVDFNRTRNIIIISITLTMGIGGAVLNYKSFSISGIGLSAVVGVILNLLLPPAKEKKPAKKE
>CP023864.1|AUI56515.1|1528053_1528380_+|Fis-family-transcriptional-regulator
MTNEEFEKNWAEHRKEVLANNEEYQHIAQSYKGSGWIDYVIFIAGFVICENYTKTIVNSIVLQYLLALVGMILIWLGYRLIKSLFNSKQTLEELEEKIKQQYRDSLSN
>CP023864.1|AUI56514.1|1526655_1527882_+|coproporphyrinogen-III-oxidase
MLGLYIHIPFCASRCIYCGFYSTVPAKKKDERRSVEEQYVDAICHEMELRAEKDDAMSGGITTALTSIYLGGGTPSQLSFKSLQKIFQTIDKVYHIGLEWDTESNRCITTTPIEVTMECNPDDVTKEFALSLRSLPINRISMGAQTFSDERLRFLRRRHTADEVETAVKRLRDVNIKNISVDLMFGFPNETLEEWEEDIERLLALDVEHISAYSLMYEEGTPLYRLLQAGKVKDMDDELYRQMYDRLIDRLSEAGYEQYEISNFAKLNTHHSIHKVHSPYRSQHNSSYWHNVPYIGIGAAAHSYSNGKRSWNIADTKAYIAALQENRRPCEEEEIDADTHYNDMIMTALRTCEGINLSSLSAEYRTYLMRLATPLLQQGLLKEDNGHLHLTRNGIYVSDSIMSDLMKV
>CP023864.1|AUI56513.1|1524287_1526450_-|elongation-factor-G
MRVYQTNEIKNIALVGSAGSGKTTLAESMLFEAGVIKRRGSVEAKNTVSDYFPVEQEYGYSVFPTVFHVEWNNKKLNIIDCPGSDDFVGGAITALNVTDEAVILINGQYGPEVGTQNIFRYTEKLKKPVIFLINQLDSDKCDFDNLISSMREIYGSKCVPVQYPIETGPGFNSLIDVLLMKKYSWKPEGGEPIVEDIPADQLPKAMELHKALVEAAAENDEGLMEKFFEEETLTEDELRTGIRKGLVTRSIFPVFCVCAGKSMGVRRLMEFLGNVVPFVDEMPKIHNTRGEEVTPDSNGPESLYFFKTGMEPHIGEVSYFKVMSGCVKSGDDLTNSDRGSKERMGQLYACAGANRIAVDQLNAGDLGCTVKLKDVKTGNTLNGKGTDQRFDFIKYPNSKYSRAVEAKSSQETEKLMAALLKMRQEDPTWVVEQSKELKQTIVHGQGEFHLRTLKWRLENNEKLQVVFKEPKIPYRETITKQAKAEYRHKKQSGGAGQFGEVHLIVEPYAEGMPDPTTYKFNGQEFKMNIKGREERDLPWGGKLVFINSVVGGAIDGRFMPAILKGVMDCMERGPLTGSYARDVRVIVYDGKMHPVDSNELSFTLAARHAFSDAFKAAGPKILEPIYDLEVFVPGDYMGDVMSDLQGRRAMIMGMDSEAGYQKLQAKIPLKELANYSISLSSLTGGRASFTTKFASYELVPNDIQQKLIAEHEAEVKEEEE
>CP023864.1|AUI56512.1|1521605_1523243_+|peptidase-C69
MKKSFATLFFLTMITYANACTNLIATKGATTDGSVFVTYTADDYGMFTNLCHYPAGTHAKGDRREIIDYDTHERHGSIPEAPVTYNVIGNINEYQVSIGETTYGGREEMVDKDGIIDYGSLMYLGLQRSKTAREAIKVMTSLAETYGYNSGGETFTIADPNEVWLLEMQGCGGEKEQRVVWVAVRIPDGMISAHANQSRIGQFSTYNTEVIKSKNCISFARSKGWFKGKDKDFNWKMTYAAPDFGGRRWCDARVWSYFNHFKDMSHWLPWALGKDPNAEDMPLWIAPDKKVDLPKMEACMRDHYEGTPLSLDNDIAQGIWESPYRPTPLKYVVDDKQYFNERPISTQQTGFSYIAQLRSWLPREIGGILWFGNDDGNMVAYVPIYCSNTERAECFNTPGADAVTFSDKNAFWVCNWVSNMVYPRYSQLFPALKEVRDSLDNAFLAAQKGVEAKAESLYATDKAAAVKYLNDYSIQKSNEMIARWRQLAIHLIVKFNDMAVKPEKDGKFLRTSTGLGEHVKRPGYSDYFKRELVKQTGDKFAVPNK
>CP023864.1|AUI56511.1|1519950_1521588_+|M23-family-peptidase
MNLLLNILLSILPFGSPVHVPVQLAGNFGEPRPNHFHGGIDIKTEREVNLGVYAIADGYISGAVVEKHGYGRAILVTHPNGYTSCYVHLNRFAPQIEAAVRKWQYQHQQFACDVKFRPGEFPVKKGQFIALSGNTGSSQGPHIHLEMHKTANGNLYDPLTFLKGIVKDKTAPAVYSFKTYPQPGQGVFQHSPDSRIFTFDKGHFQAWGKVGFGVRASDHMDSVYNNYGIRYTQLYCDGRLVFSSDVNNIPTSCHRMVNSWGDYDHFLSTKIWFMKSYIEPGNTLPILRADANKGIINFNQQRDYHLRYVLKDVFGNQTVKEFTVRGEPEAIPIAYHPEGATPLYYDKDNHFNADGVRLNIKKGLLAKNGWLQLLHGRTYNAHSEAYSFAKAAYPLFNYAQISLKPSGAVHNPEKLYVAMRNSLNADAPASFCGGKYAKGWVTGRMRELGCAYFLAYDDTPPTITQQSLNPRHLSFKVTDTGSGLQGYKAYLDGQFILLQFGKNKEILFCDLADTPVRPTGKERTLRLIATDNRNNKNEYLTKIKY
>CP023864.1|AUI56510.1|1519659_1519887_+|hypothetical-protein
MTDSPKSLRRIAANVIQTTTGTIEQGIVVIEDGIVVQTYPFSEEEAMTEWITGTIILRLDNEGKYRAYKGDQLLK
>CP023864.1|AUI56509.1|1518709_1519663_+|DUF4296-domain-containing-protein
MRSKYLVRPFVTLCVVLLALLVVSCKPTIPSEYIQPSEMEDMLYDYHISMAMVNREGYTDVKQKAYKLAVMKKYGVSEEKFDRSLQYYMRHTEKLHDIYVDLTKRLENEARSQGASESELAQYGNITSKGDTTDIWRGKRSLILSPYAPVDRETFEIKADTAFHKGDRLLMSFDSQFIIQDGMRDAIIMMVVTYTNDSIITQYQHITSDSRNTLTIDTSDSLRIKNIRGYFLMLKGQQPSSTFKMLIINNIQLVRMHLQQQESALPKDSLQQSDPIRTIGGEPVSPEAASSNPPAPPTRTPEDARRERGIPDRPDKL
>CP023864.1|AUI56508.1|1518021_1518702_+|lipoprotein-signal-peptidase
MSSKQKKQSLIATLLIILLILIDQIIKVVVKLNMNLGDSIHIFDWFQIQFIENNGMAWGMELGSKLFLSVFRIVAIGFLIWYISNRIKRGARMGYIIVLSMITAGAAGNIFDSLFYGQIFTASTPYYVEGATPATLVSWGQGYAPVLMGKVVDMFYFPLFHGTFPDWFPVWGGESFTFFSPIFNFADSCISVGVFIIILAFRKDFNGWVPATEKKVTDKENIADNQ
>CP023864.1|AUI56518.1|1532211_1534434_+|dipeptidyl-carboxypeptidase-II
MKQNLKNVVLAAGLACTALTGQAQNVRPKTTQTVSNSLMKQSTLPFNAPDFSHIKGTDYLPAIKLAIAEQRAEIKKITDNKQKPTFTNTILAYERSGKNLERISNIFYALVSADKTGEIEKAQGSIVPLMTEFENEVKFNQKFFQRIKYVYDHEYNTLKGEDKKLLEVVYKDFTHAGALLPKEKMARMQEINKELAKLQQDFGDMLPKAANEATVWVNDVKELSGLSEADIAQCKKDAESRGGKAPYCIVITNTTQQPILASLDNRSLRERVYNASIHRTDGTGAYNTFPIIVKIARLRAEKAQLMGYKNYASYSLEKTMAKNTDNVYAFLRQMIGAYKPKAEEQTKAIEEYMKAQVNKLASGQVDKLTGEQVNANNSSTSQPVNSFTALQPYDRFYYSSKMKKDQFNFSDDDVKPYFNLDSVLVNGIFYAAHRVYGLSFRERKDIPTYHKDMKVFDVLDADGKQLALFYCDYFRRPTKRGGAWMSAFLKQSLDRNQKPLIYNVCNYAKAPEGQPTLLTWDETQTMFHEFGHALHGMLSHCKYNTLSGTAVARDFVEMPSQFNESFASIPEVFNHYARHYKTNEPMPDALREKMLGSLNFLSAYALGENLAATCLDMAWHCLSPSEVPTAEEAPAFEKKVLAEIGLLNAQIPPRYSTSYFNHIWGGGYAAGYYSYLWSEVLAVNIADYFAEHGALTRKVGDDFRQKVLSRGNTRDLMTIFSDFTGLKAPDTKGLLKARGM
>CP023864.1|AUI56519.1|1534527_1535217_+|twin-arginine-translocation-pathway-signal-protein
MGNDKTRNKSKDAQTMGISRCSHPFLQGRGWRRGRLFILFLLLFLTLNFGVKGYWKIKSYSFQSQFKDVWEICHDKGFNEDYCVLVDFSRPSGEDRMAIIDLKTLSVLDTGPCAHGKGEGNSAWKPRFSNKEGSKCSSLGHFKIAEKSYSANVGLCFALDGLDSSNDNARRRHILIHSSRYVGIMHHLTSYLPLSNASWGCFTTSPAMLKKIEAICDKSKKPILLYAYK
>CP023864.1|AUI56520.1|1535203_1535788_+|50S-ribosomal-protein-L19
MPINKFGEQKMMTKLQLKRLLTCILLTMLVTLNTRGQALCVIDGTPLPDSLLHVTINEMRSDSAKEIVANRLRLIPPYAIESIQIFSPEEQIKQGNNLTFCKTPRDIVFIRTNSFAELQWIIDGRPKKPHKRLTIIEYMLSPKSIIEAMPKSIKSTDISALHLITYRKDPRQEMRPTIIIETRKASTKPSKRRR
>CP023864.1|AUI56521.1|1536022_1538602_+|RNA-binding-transcriptional-accessory-protein
MDRPTSYGKKTEPMNNNEQSANTTPSLSGDLKEASFISQSLSLPHRSVLAVLILLNEGCTIPFISRYRKERTGNLNEVQITDISELYDRLKELGKRKETILKTIREQGKLTTALETKIQSCMDATELEDIYLPYKPKRRTRAQIAREQGLEPLALEIMSVAASSNPSVGRRTALSCLSEKERDKLASAWQEYQEGTKGSLFAREHVDISTLLEGVGEASLTLSKELEGALDIIAEIVSENQQARNTVRTAYHRGAIISSKVIKKMKDTDEAQKFSDYFDFSEPLRRCNSHRLLAMRRGESQGILRVSITIEGEECISRLTRQFVRGHGLCQALVSQAIEDSFKRLINPSMENEFAALSKEHADEEAIKVFTENLRQLLLSPPLGQKRVLALDPGFANGCKIACLDEQGTLLHHEIIYPHPPRNLVRQATEALHRMINTYKIEAIAIGNGTASRESETFISNILQDTTNDFGNILRYVVSEDGASIYSASPVAREEFPDEDVTTRGAISIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQSKLKHSLDQTVMSCVNQVGVNLNTASRHLLTYVSGLGPALAQNIIDYRHEHGPFISRTQLKKVKRLGNTAYQQCAGFLRIPNAKNPLDNSAVHPESYHIVEQMAKDHGCTIKDLIGNKSLLSQIDIQQYIHKGLTPLSPSSLPPRSSSPIAKETTGNGSHKRENSSKPLSTNSEIATIAFSGGSKKTYSSLSEGLSELSLTPSEELGEATLRDIIAELEKPGRDPRGEVEVFEFDKNVHSLNDLIVGMELPGIVTNITNFGAFVDIGVHQDGLVHISQLSDRFVSDPTQVIRLHQHVRVRVVEVDMRRKRIGLSMKNIKQ
>CP023864.1|AUI56522.1|1538606_1539104_+|hypothetical-protein
MNTTKKTLAYLGGIAFTILGIWLLTMDTSTTTYPVWKIKVTGVLSVTFFGGSVLYMTYRKIRLIITHKKDIEFTDSGLSIYGAKEILWREIADFDLIRFKGNRLITIQMKNPTEVLASEPSWIKRKTMEYNLKTINANYAFPAYLIDGRAEEALALCKEKLVEHQ
>CP023864.1|AUI56523.1|1539582_1540215_+|hypothetical-protein
MLFVLIFWAVIFLLLSLVSGLLTLPFTYFLCKEQRKRRMILSFFTPGVALFTYAASSLVAMIIIAIILGTDIGIGDSWSTPLKNNYELSSTDTPDNGGICKKGDLYNEILISDVTHIQVIGDSVIGKADGRYFIFNLQDGTHTDSLTYQGLTRQISPFSIHLIDNNTYYWDQRRTAYIIGGVLSLLLTVLVVRLFWRIGLHGFQRRQQGS
>CP023864.1|AUI56524.1|1541180_1541930_-|hypothetical-protein
MSNKRLFRSLMSFLLLLMGLGQPVYGQYTSIQDTARCLSVRDSSATEAFGKNTDRQVTAYYYANKASLVDKYFRRGMSRISILNIPKGKRPAPESYLKRRYIRRHLKYFKGGASCIVSKAMLERYDGDSIGKADNSQFIMTKAEMDSVLTKSHGDLSRIEHELGIPSGAWKHRVLVRIDIPKPKKLRLRMASGNEVGANVLWLPGGLLPTGYKEAVIDRIPKGKYKASLIVLTGEVNDGLAVPNKNEQK
>CP023864.1|AUI56525.1|1542046_1542514_-|hypothetical-protein
MMRGKIRITKNLVITVFVSTLLIEFVLLFMHGCYDGDGLRFNLREQTFSVEEGCVCGGGLNFSSEDAADKFSVIYNKNIHAFWYDSYNPSVLDINNLPACCRVVLHDDTLLLHRLPLLPNTAYNVYRMSGCRRVRTLTIVTDQQGKVVHYRKNNF
>CP023864.1|AUI56741.1|1542604_1543072_-|nucleoside-deaminase
MTNEALMRRAIELSADSVRNGGGPFGAVIARRGEIIAEGSNGVTIQNDPTAHAEVSAIRKACQKLGTFDLSGCDIYTSCEPCPMCLGAIYWSHLDKIYYANDRKDAANIGFDDDFIYQEIEVAPQYRKKPSEILLRNEAIKVFQLWDEKLDKTEY
>CP023864.1|AUI56526.1|1543095_1543734_-|HD-domain-containing-protein
MQQPNLEIMTFVERQILPRYNDFGRSHGLGHVQRVIKSSLALAAVTGADVNMVYVIAAYHDLGMEGPRAIHHLTSGKILVADQRLRKWFSAEQIKIMKEAVEDHRASSSRVPRSIYGKIVAEADRDLEPEVVFSRAILFGIENYPEKNDDEMWLRFRDHMKEKYGRAGYLRLWIPGSPNAKNLETIRKTIDDETALRKVFDRIYRQIREEDK

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Crispr_ID: CP023864_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_25

1581804-1581942

Orphan

Consensus_repeat	Method
CCCCCTGCCCCTCTCCGAATGGAGAGGGGAGTAATCACCGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_25

>merge|CP023864|25|1581804-1581942|CRISPRCasFinder
CCCCCTGCCCCTCTCCGAATGGAGAGGGGAGTAATCACCGAGATACCCCTATGGCTAATCATTAACACCTAACACCCAACACCCATCAGAGGCCTCACCCCCTGCCCCTCTCCGAATGGAGAGGGGAGTAATCACCGAG

>CP023864|25|22|1581804-1581942|CRISPRCasFinder
CCCCCTGCCCCTCTCCGAATGGAGAGGGGAGTAATCACCGAG	ATACCCCTATGGCTAATCATTAACACCTAACACCCAACACCCATCAGAGGCCTCA
CCCCCTGCCCCTCTCCGAATGGAGAGGGGAGTAATCACCGAG

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56548.1\|1576798_1577188_-\|diversity-generating-retroelement-protein-bAvd-family-protein	unknown	unknown	gnl\|CDD\|319868
CP023864.1\|AUI56544.1\|1569510_1569720_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56557.1\|1592887_1594096_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340952
CP023864.1\|AUI56553.1\|1585031_1585631_+\|DUF4738-domain-containing-protein	unknown	unknown	gnl\|CDD\|374200
CP023864.1\|AUI56559.1\|1595745_1601295_-\|alpha-2-macroglobulin	unknown	unknown	gnl\|CDD\|380081
CP023864.1\|AUI56542.1\|1561841_1562771_+\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|214889
CP023864.1\|AUI56550.1\|1577850_1580556_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372499
CP023864.1\|AUI56561.1\|1601989_1602691_-\|membrane-receptor-RagA	unknown	unknown	gnl\|CDD\|372685
CP023864.1\|AUI56558.1\|1594572_1595580_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
CP023864.1\|AUI56551.1\|1580926_1581130_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56546.1\|1575040_1576132_-\|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|238828
CP023864.1\|AUI56543.1\|1563058_1564483_-\|spore-coat-protein-CotH	unknown	unknown	gnl\|CDD\|378045
CP023864.1\|AUI56547.1\|1576217_1576802_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130684
CP023864.1\|AUI56549.1\|1577207_1577702_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56556.1\|1590768_1592184_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226584
CP023864.1\|AUI56545.1\|1571795_1574666_-\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319776
CP023864.1\|AUI56554.1\|1586102_1587149_-\|3-dehydroquinate-synthase	unknown	unknown	gnl\|CDD\|341474
CP023864.1\|AUI56555.1\|1587457_1590439_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379720
CP023864.1\|AUI56552.1\|1582544_1584074_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|225301
CP023864.1\|AUI56560.1\|1601384_1602005_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|274163

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56548.1\|1576798_1577188_-\|diversity-generating-retroelement-protein-bAvd-family-protein	gnl\|CDD\|319868	cd16376, Avd_like, diversity-generating retroelement protein bAvd and similar proteins. The bacterial accessory variability determinant (bAvd) protein, together with a reverse transcriptase, is involved in retrohoming processes as part of a diversity-generating retroelement (DGR), a type of system that is involved in generating sequence variation in bacterial proteins by inserting coding information from a template region into a variable region of a protein coding gene. bAvd forms homopentamers and interacts with the reverse transcriptase as well as with DNA and/or RNA.	8.35307e-25
CP023864.1\|AUI56557.1\|1592887_1594096_-\|MFS-transporter	gnl\|CDD\|340952	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of L-fucose permease (also called L-fucose-proton symporter) and similar proteins such as glucose/galactose transporter and N-acetyl glucosamine transporter NagP. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. Glucose/galactose transporter functions in the uptake of of glucose and galactose. The FucP-like subfamily belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.7007e-69
CP023864.1\|AUI56553.1\|1585031_1585631_+\|DUF4738-domain-containing-protein	gnl\|CDD\|374200	pfam15889, DUF4738, Domain of unknown function (DUF4738). Family of uncharacterized proteins found in CFB group of bacteria, mostly from Bacteroides and Prevotella genera present in human gut and oral cavity, respectively. JCSG target SP13584B, the experimentally determined structure consists of two WD40-like beta sheet repeats forming a beta sandwich.	5.57122e-39
CP023864.1\|AUI56559.1\|1595745_1601295_-\|alpha-2-macroglobulin	gnl\|CDD\|380081	pfam17973, bMG10, Bacterial Alpha-2-macroglobulin MG10 domain. Alpha-2-macroglobulins (A2Ms) are plasma proteins that trap and inhibit a broad range of proteases and are major components of the eukaryotic innate immune system. However, A2M-like proteins were identified in pathogenically invasive bacteria and species that colonize higher eukaryotes. Bacterial A2Ms are located in the periplasm where they are believed to provide protection to the cell by trapping external proteases through a covalent interaction with an activated thioester. This domain is found on the C-terminal region in A2Ms in bacteria. Structure analysis of Salmonella enterica ser A2Ms (SA-A2Ms) show that they are composed of 13 domains, all of which fold as variants of beta sandwiches with the exception of the TED, which consists of 14 alpha helices. Most of the beta sandwich domains appear to serve a structural role and are referred to as the macroglobulin-like (MG) domains. This is the MG10 domain. MG10 is markedly different from the other MG domains in that it has more beta strands and an alpha helix. The position of MG10 is stabilized by, in addition to other hydrogen bonds, the formation of a beta sheet with MG9.	5.35564e-29
CP023864.1\|AUI56542.1\|1561841_1562771_+\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|214889	smart00892, Endonuclease_NS, DNA/RNA non-specific endonuclease. A family of bacterial and eukaryotic endonucleases share the following characteristics: they act on both DNA and RNA, cleave double-stranded and single-stranded nucleic acids and require a divalent ion such as magnesium for their activity. An histidine has been shown to be essential for the activity of the Serratia marcescens nuclease. This residue is located in a conserved region which also contains an aspartic acid residue that could be implicated in the binding of the divalent ion.	1.13441e-36
CP023864.1\|AUI56550.1\|1577850_1580556_-\|hypothetical-protein	gnl\|CDD\|372499	pfam13149, Mfa_like_1, Fimbrillin-like. A family of putative fimbrillin proteins found by clustering human gut metagenomic sequences. Analysis of structural comparisons shows this family to be part of the FimbA (CL0450) superfamily of adhesin components or fimbrillins.	2.35791e-06
CP023864.1\|AUI56561.1\|1601989_1602691_-\|membrane-receptor-RagA	gnl\|CDD\|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	1.96705e-08
CP023864.1\|AUI56558.1\|1594572_1595580_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	2.94065e-121
CP023864.1\|AUI56546.1\|1575040_1576132_-\|RNA-directed-DNA-polymerase	gnl\|CDD\|238828	cd01651, RT_G2_intron, RT_G2_intron: Reverse transcriptases (RTs) with group II intron origin. RT transcribes DNA using RNA as template. Proteins in this subfamily are found in bacterial and mitochondrial group II introns. Their most probable ancestor was a retrotransposable element with both gag-like and pol-like genes. This subfamily of proteins appears to have captured the RT sequences from transposable elements, which lack long terminal repeats (LTRs).	1.59636e-22
CP023864.1\|AUI56543.1\|1563058_1564483_-\|spore-coat-protein-CotH	gnl\|CDD\|378045	pfam08757, CotH, CotH kinase protein. Members of this family include the spore coat protein H (cotH). This protein is an atypical protein kinase that phosphorylates CotB and CotG.	1.53124e-39
CP023864.1\|AUI56547.1\|1576217_1576802_-\|hypothetical-protein	gnl\|CDD\|130684	TIGR01623, hypothetical_protein, putative zinc finger domain, LRP1 type. This model represents a putative zinc finger domain found in plants. Arabidopsis thaliana has at least 10 distinct members. Proteins containing this domain, including LRP1, generally share the same size, about 300 amino acids, and architecture. This 43-residue domain, and a more C-terminal companion domain of similar size, appear as tightly conserved islands of sequence similarity. The remainder consists largely of low-complexity sequence. Several animal proteins have regions with matching patterns of Cys, Gly, and His residues. These are not included in the model but score between trusted and noise cutoffs.	0.0050149
CP023864.1\|AUI56556.1\|1590768_1592184_+\|hypothetical-protein	gnl\|CDD\|226584	COG4099, COG4099, Predicted peptidase [General function prediction only].	4.14969e-08
CP023864.1\|AUI56545.1\|1571795_1574666_-\|cation-translocating-P-type-ATPase	gnl\|CDD\|319776	cd02081, P-type_ATPase_Ca_PMCA-like, animal plasma membrane Ca2(+)-ATPases (PMCA), similar to human ATP2B1-4/PMCA1-4, and related Ca2(+)-ATPases including Saccharomyces cerevisiae vacuolar PMC1. Animal PMCAs function to export Ca(2+) from cells and play a role in regulating Ca(2+) signals following stimulus induction and in preventing calcium toxicity. Many PMCA pump variants exist due to alternative splicing of transcripts. PMCAs are regulated by the binding of calmodulin or by kinase-mediated phosphorylation. Saccharomyces cerevisiae vacuolar transporter Pmc1p facilitates the accumulation of Ca2+ into vacuoles. Pmc1p is not regulated by direct calmodulin binding but responds to the calmodulin/calcineurin-signaling pathway and is controlled by the transcription factor complex Tcn1p/Crz1p. Similarly, the expression of the gene for Dictyostelium discoideum Ca(2+)-ATPase PAT1, patA, is under the control of a calcineurin-dependent transcription factor. Plant vacuolar Ca(2+)-ATPases, are regulated by direct-calmodulin binding. Plant Ca(2+)-ATPases are present at various cellular locations including the plasma membrane, endoplasmic reticulum, chloroplast and vacuole. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
CP023864.1\|AUI56554.1\|1586102_1587149_-\|3-dehydroquinate-synthase	gnl\|CDD\|341474	cd08195, DHQS, Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway, which involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds, is found in bacteria, microbial eukaryotes, and plants, but not in mammals. Therefore, enzymes of this pathway are attractive targets for the development of non-toxic antimicrobial compounds, herbicides and anti-parasitic agents. The activity of DHQS requires nicotinamide adenine dinucleotide (NAD) as cofactor. A single active site in DHQS catalyzes five sequential reactions involving alcohol oxidation, phosphate elimination, carbonyl reduction, ring opening, and intramolecular aldol condensation. The binding of substrates and ligands induces domain conformational changes. In some fungi and protozoa, this domain is fused with the other four domains in shikimate pathway and forms a penta-domain AROM protein, which catalyzes steps 2-6 in the shikimate pathway.	4.32629e-138
CP023864.1\|AUI56555.1\|1587457_1590439_+\|hypothetical-protein	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	4.81736e-27
CP023864.1\|AUI56552.1\|1582544_1584074_+\|diguanylate-cyclase	gnl\|CDD\|225301	COG2461, COG2461, Uncharacterized conserved protein [Function unknown].	4.67111e-118
CP023864.1\|AUI56560.1\|1601384_1602005_-\|radical-SAM-protein	gnl\|CDD\|274163	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA), benzylsuccinate synthase (BssD), gycerol dehydratase (DhaB2) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0 to 8 additional cysteines.	3.79817e-29

>CP023864.1|AUI56551.1|1580926_1581130_-|hypothetical-protein
MKKIRQTVRQLYVRPTVEVVKVETEGNFLAESPLVRPGGGGTTSHPGSIQVVPPTEEDGGDDDNLEG
>CP023864.1|AUI56550.1|1577850_1580556_-|hypothetical-protein
MNKLFFYACSALLAGGAALTAVSCADDDLDNGGTNGNDALVRFSVNDVQEGAISRGAMTRGAITPGLGSNDLAGGKLAAHSNRNIDVCLIETTVEGVNPVKADARTRADIIATSTLGDFSASGIRGTAASGILTTPEWFHAKKTKSNGELYSPIRWSFAQPKARFFAVYPNAESYAKMTINNTDATSGSPSVDFEVNSDVTKQVDLMTACTGDVEYATQFQQPTTNLDFRHALTGIRFAVGQNLSWNKTIDKVELRGAVMKSKYVLSKQFDGNGADWDHSSDTRGNATLSGVSVSTSANPNVTIMGNAGDNYTFYMIPQQLTGHVTAYVHCTDGTEITVPLKGEWKAGTTRTYKLSQTTSTWTYTLTPTDPSRAANYDETQSQAYGITSYREDPATHQQQAVAWKVVGYDANNDGTFSMSEKPAWLTSLSKTEGTGGTAADQGTATLTKDVTDLLAKRNKALKEATELGTATPYDLSTKGGSENRSTANSYVISAPGHYRIPLVYGNAIENGATNANSYTSHAAAGNSYVLYNFKDHNNQNITDPWIEKTNGAANNGVDGAEVVWADAANLVHSPSIVHDGGEGFLDFTVSASDIQSGNAVVAVKKGGTTVWSWHLWFAPKDALDKIPVTNYQGKVYNFTKETLGWKPTQWSGSTYDKARTVKVKVVQTIKNGGVAQETVINITQNPGNVKKGATTLYQFGRKDAFPGVDASELAANSHFTQSAGDNMSIMNGIQHPDNFYTWGSSWYSTPPTGYSYYNLWSAENTATGFNDNSVVKTVYDPCPVGFKMPASNAFTGFTANGQNGGTMNVYGTSDWQTYQNNFGHNFWTSSSKTATINFPASGYRSHNDGSLDYVGSLGYYWSAVPYSTISGCYLGFSSGGVSPVSSSARAYGFAARPVSE
>CP023864.1|AUI56549.1|1577207_1577702_-|hypothetical-protein
MNIKEIVEAEKKNTCRINLYREGLFFRAYEASAFALCSFVHPFKVIKRQLKVLNGEEVAYVGFPASSEDKYLNGRNIIESDDAHKVIGLTEPIDLNAFVEWKKGIELKESTQTGSMTSNSTMPESAGHIDAGSIIRMVRDFNVANSTPMQCMMFIAQLQGKLND
>CP023864.1|AUI56548.1|1576798_1577188_-|diversity-generating-retroelement-protein-bAvd-family-protein
MAQYDNLPVFKAIYDLLLDVYQRTRNVPRDLRYTLVQDLKNELVELMVMVYQVNSQREKEQILRRCLEVFVHIRLRIRLLKDMHHLSVPQFAQLCLQTESISKQLTAWHKYSQKGTNATKCTNKEEAGV
>CP023864.1|AUI56547.1|1576217_1576802_-|hypothetical-protein
MKQTLITTYNTIYAKHTDSFGCFVLMTLLVFLLSPLLTQAKPECQRLRSLTACISKSSNPPVHVKGTQTPRGNASWLVMLSQSVGWSHALISFLFHRITNGGGPHASFNEWLLFFPASGYRNNNDGSLNNVGNNGYYWSAVPNNTNNGCNLNFNSGNVNPLNNNNRTYGFAARPVSAFTAYRRGRDVDELNGNK
>CP023864.1|AUI56546.1|1575040_1576132_-|RNA-directed-DNA-polymerase
MKFEMNLEHNLMHLYDELRTRTYRPSPCICFITFDPVQREIFASSFKDRVVHHLLFNYIAPLFETTFIYDSYSCRVGKGTLKGVERFEHHLRSCTQNYTQSAYVLKLDIKGYFMSIPKRELRELLRKEMDRKPEWNKKFDRQLVDFLIDSILLRDPTSDVRIVGGKEDWEGLPPSKSLFRSAKGSGLPIGDLTSQLFSNIYLNQLDQFAKRQLGLKYYGRYVDDFYVIDTDHRKLARLIGLFRDYLHDELHLTLHPKKISLQHCSKGMTFLGAYIMPYRRYPRWRTICKFRNRMRLIEALCRCRTTMKEKQIFLLRSVINSFCGYLGHFSSYLLRKHLVDRNPFYRYFFFYGGFHVVGLKNIE
>CP023864.1|AUI56545.1|1571795_1574666_-|cation-translocating-P-type-ATPase
MEQKRHYEGLTDTEVLASREQHGANVLTPCEKDPLWKQFLEKFEDPLIIILLIAGFLSIAISCWEYWGLHSEDGVAVFFEPVGIFIAILLATSIAFYFELKADKEFSILNQANDEEEVEVIRNGNATTVAKKDIVVGDVVIINTGAEIPADGRLLEAISLYVDESTLNGESVPAYKSVKEEDFDKDASYATNQVLRGTKVMEGHGIFVVEAVGDSTENGKVFEAAQIDDSVKTPLSEQLDGLSELITKLSYVFAGCIIVGRLIVFFHWQPIVWTLSIPTLIFFWLVIKKFEGWKWFVNTFITIGYFLILMACVVVFHIMLLPEESMTGLLAHTLNTMMIAVTLIVVAVPEGLPMAVTLSLAYSMRRMMKTNNLVRKMHACETMGATTVICTDKTGTLTQNQMRVYQTQFYALDKQQLDESLAARLLMEGISVNSTASLDYSEKDKPEVLGSPTEGALLLWLNDHQISYREIRSNVQIVEELPFTTERKYMAVLVKSTLMEGKQILYVKGAPEIVYGLCKQTDCDVTKEDIERQLEEYQEQAMRTLGFAYQIVDGKEDVFKEGRVVADGLIFQGIVAISDPVRDDVPAAVADCMKAGIDVKIVTGDTSRTAKEIGRQIGLWTSSDSDKNIITGPEFAALSDAELDKRVEDLKIISRARPLDKKRLVESLQRCNEVVAVTGDGTNDAPALQAAHVGLSMGDGTSVAKEASDITIIDNSFSSIGKAVMWGRSLYQNIQRFLLFQLTVNVAACFLVLAGAFMGTESPLTVTQMLWVNLIMDTFAAMALASLPPSERVMKDAPRDRNAFIISRSMGWNILGVGGFFFVMLLALLYIFEHADITALKDIIHLQLGSTNGLSPYELTLLFTIFVMTHFFYLFNARAFETGRSALHFKGCRGLLFIVMIILIGQIAMVELPILQKFFNIAKGGLSLEDWIIIMLGSSLVLWVREAWHLIKPKKK
>CP023864.1|AUI56544.1|1569510_1569720_-|hypothetical-protein
MFIGYRVDKYLSIRTNKLTVIKMKKNLWFVFLLVLTDTVLRIRERKSGMNSRSDFFQLSPIAQLVRAPH
>CP023864.1|AUI56543.1|1563058_1564483_-|spore-coat-protein-CotH
MINLYRFFTLMVVLISSSLATFAQSNNVLPTDLGQSIPVLVLRGTFSSEYQNGTVDFYSSQGVTPVSYEAKIKWRGGSTNTEGKHKRNYKIKFKEKQQFFGLKADKNWILDAGQQDLFRLRNRIATELWTDFACKPYYTADGAEVVTGVRGRVVEVFLNDEYVGIYSLTETMDNKTLGLKQSKKGIIHGQLWKTSGRGLSMMYNTPSAFDNTSSTWDSFETKYPDIKDVNPTDYSPLWKAINFVVNSSDEEFKDSVAYYFDLPVVEDYYIYTQTLCAVDNIGKNMYWAIYDSKESPKITFAVWDLDLTVGNSYLKVYDEKYTLPNHIIKGYFNLIKRLIATNAGNFNSQVRERYWSARKDVLSTDSLIARYKSYYQLLKKCGAAERETQRWSGDTDILEQKIDYDKEMEHIANWITRHMKVLDRQLFNDPNAIKPSRVAAKESDDVYTLQGIKVDPNHLGSGVYIKGRKKIFIK
>CP023864.1|AUI56542.1|1561841_1562771_+|DNA/RNA-non-specific-endonuclease
MYKITRKRNVWVVTLLSLALFTACSKDDDSSTNTGGTVDITNNINSNLKDLRSETHHLEFPKLKDGHSTVLTHKLRTGEVNYSVEWDIEKMSNRWTCYQIYASNAQQNTERKSPKSPNLYPMDPLWTANAFFSDDPYYGSGYDHGHLCPSQDRVNSRESNDQTFFLSNMQPQVHGFNAGIWEVMERKMRTYITATGGSKDTLFICRGGTIDNQGQFTYIRNKFIVPTYFFSAALMKYKVKGQGEWQYKAIGFWFKHENNSGTSLKPYVVSIKELEEKTGIDFFCNLPDDIERNVESKSHDQMTLIWNIK
>CP023864.1|AUI56552.1|1582544_1584074_+|diguanylate-cyclase
MANKMKDYLPKIEMEKMQAMLELEEKYETGQLSLEEAREQMKTKVGKIRPYHLAFIEQNMKSREDDECIRADMRKIIELVEGFMDYSRPDVPEDHPLSHYYKENDEMRRLLLAVEDLIQYPMIKNQWLELYDQIRQYPIHYQRKQNQLYPLLEKKGFDRPTTTMWNFDDIIRDEIKESLRLLEANDEEAFIAAQSELIANARDLMEKEETILYPTSYALISPEEFEDMKAGDQEIGFAFFTVETPSSPNTHHSSPKEGFAEDLQALLSKYGYSAGPQQELDVATGKLTLEQINLIYQHLPIDISFVDENELVKFYSDTDHRIFPRSKNVIGRQVSNCHPRKSVHIVEEIVEKFRNGEQDKAEFWINKPEVFLYIVYFAVRDKQGRFRGVLEMMQDCTHIRELTGSQTLLTWAGKEEENASTTTTTDDKNDDAPTAQADKQIEITSDTRLKDLFEVYPHLKKELAARYPSFKMLNTPLGKLILKKATVRTAAERSGLGEERFIQLLKDCI
>CP023864.1|AUI56553.1|1585031_1585631_+|DUF4738-domain-containing-protein
MTRNILHIISLSLLLLGVTACKQERKSNDIITKIAPKPHVPSGTKAMDEFKYEKKVEWMGATYTIRIHRFADKSLSTVSDEDGRKYYDNKFQVQILRSDGSSFYDRTLTKDDFREFTDNQYAKNGALIGFMFDRAEGNKLYFGASVGSPDPKSDEYVPLDVTIDNMSRMRINKATQLDTPSDQPEQPKTEVDKSEEEGV
>CP023864.1|AUI56554.1|1586102_1587149_-|3-dehydroquinate-synthase
MKQNIIISKQFKSELATAISECEKDKIFVLVDETTRELCWELIKDDFCLKKAQVITIGTTDSNKTLDTLVAVWEALQQGGATRHSLLINLGGGMVTDLGGFAASTFKRGINFINIPTTLLAMVDASVGGKTGVNFGGLKNEIGVFNEANTVILNTDWLKTLDAANIRSGYAEMLKHGLIADEKMWAELINYNLADPDLLLLSGMLGRSVCVKERIVEEDPHEKGIRKSLNLGHTFGHAFESWALDHRPILHGYAVAFGLIAELYLSVVKTGFPTERMRQTVSFIRTYYGVLPITCNDYARLIELMHHDKKNRGDEINVTLLGGIGDIRINQSVSEEEVKEALDFVREG
>CP023864.1|AUI56555.1|1587457_1590439_+|hypothetical-protein
MVKRLLTFVLLLSGSISMLAQNRTITGSLYDGELKEKVPFAVVQLLKQDSSYVVGATSDEAGSFKITAPNNGRYILKASYVGYKTIFQNVTIANEQDVSVGQLDFQVDTRTLKEVKVVACAPKVVVKADTFQYNASAYRVPEGSTIEALVKRLPGAEVSSDGTIKINGKEVKKILVDGKEFMVGDTKTAMKNLPTSIIQTIKAYDQKSDLSRVTGIDDGNESTVLDFGIKLGMNKGLFSNIDLGIGTQNRYSEKAMGAYFNNKFRMMGFASANNVNDMGFGGGPRGGFGGVRQGLNATKMVGLNMNYDNGKTLQWDGSVRWNHADGDLNTRVASENFVARQGSFANRLSQEYTRSNSWDGRFRLEWRPDSVWNIMFRPNFRLSKSDGQIVSSSAAYNADPYETVDDPLSTAAIAQLKGLGLMGNTQRNMTISYGNTTALGAMLQVNRKLSSNGRNVTLRTDANYSNSDSKTFSTQDIQYFQLQDALGNDSTYRAYRYNLMPTKSWDYALQATYSEPIARKTYLQFSYQFKYGFSKSDRDTYDLSALPSGTFGSLKPAYRSWDNYLGLLTNPLGNYLDNNLSRYSEYRTYTHDVQVMMRMIRDKWKMNAGVMFQPQHSTYMQDYLGVHVDTARTVFNWSPTFDFRYKFSEQSNLRINYRGTIAQPTMSQLLSIVDNTDPQNISIGNPGLKPAFTNNFRLFYNTYKQSHAQALMTFANFSTTRNAIGNSVTYDAVTGARTIQPVNVNGNWEADAGLMYNMSIDSAGVWNIHSFSRANFNRYVSYLQLNRTSSLDKNITKSLSLGERLAASYRTSWLELELDGSVDYTNTKNNLQSMSNLRTWQFAYGGTLSLNLPWNMSISTDLHQTSRRGYSDASLNTNELLWNAQISQSMLKGNALTFSLQFYDILRQQSNLSRVINSVSRTDTEYNSINSYIMLRATYRLNLFGGKNAMPKPKDGPDFDRNGPGMGPRGGQRPPRGERPSGPSPSGGGFGGF
>CP023864.1|AUI56556.1|1590768_1592184_+|hypothetical-protein
MRQTNHFIIAVGLLFALSANTHIAHAQGRNMQEKVKNYFLQTLKTKQDEELKSKETYQRNRPYTTSIQQVMKANEIAKNQKMVWTAWCEANRALKEEKLAKPEDLRKGVKAAWHLPMTLEKEAVMPYYYGRKGSSEGKLPLFLYLHGSGPKEQEWSTGLALGNRFKDVPSLYFIPQIPNEGDYYRWWQVAKQFAWERLLRQALAEDNVDANRLYVFGISEGGYGSQRLASFYADYWAAAGPMAGGEPLKNAPIENCANIGFSFLTGADDTGFYRNILTYYTQVAFDSAQLARPMDADKRPLFVHRINLLPGMQHHINYDLTTPWLKNFVRNPYPKTVLWEDYEMDGRHRSGFYNLQVIASPTKNRTYYDMTIHDNVVRVSIREVEYTAVERDKQWGIEMKFNRNYTTAKGGRLRIYLNNELVDMAKPVTVIVNGQECYRKTVKPNLQDMINSCTEYYDPYRVYPASIEVSY
>CP023864.1|AUI56557.1|1592887_1594096_-|MFS-transporter
MKEQKSFLVPMAFLGLMFFTCGFALGINSLLVPVLKVSLSVSSMEAYMLIGATFLPFLIFGYPAGILISKIGYKRTMATAFGMFAIAFGAFIFSADAKSFPLFLTASFFCGTANTFLQAAINPYVTILGPTESAAKRISIMGMINKLAWPVSPLFIALFAGASGSVAIDDLGKPFAVIIFLFIALGVVALLSPLPEVKAAGEDSSETDEIDQEVSTYANSKKSVFQFPHLVLGAIAIFFYVGAETIVLGTLIDYANELGLTHPENYSWITPISISIGYIAGIILIPKYLSQTRALQICSFVALLGTALVVLLPGVYSIFSVGVMALGCSLMWPAFWPLALMDLGKFTKKGSSLLTMGLIGGAAITVLFGLLKDVSDARYAYGLCFVCFGYIMFYAFKGYKLR
>CP023864.1|AUI56558.1|1594572_1595580_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MLQIEIDNGSGFCFGVTTAIKKAEEELAKGTKLYCLGDIVHNSMEVERLTKKGLITINHEQMRELHDVKVLLRAHGEPPETYELARRNNIEIIDATCPVVLALQRRIKTQYEKGRQPSYMITSKGNTTVNDPSKLRPLTEGEDTTSSSSVSLPPAVGEGQTLSASSSIVIFGKNGHAEVLGLVGQTHSHAIVIEKFEDVKALDFTHDIYLYSQTTKSLDEFHKIIDYIQRHISPDAKFQSFDTICRQVANRMPNISTFAARHDLILFVAGRKSSNGKVLFHECLSVNPNSHQVESADEIDMNWFNGVETVGICGATSTPKWLMEECRDEILRYTK
>CP023864.1|AUI56559.1|1595745_1601295_-|alpha-2-macroglobulin
MRKSLIILSIIFLLLPISVTAQSFDALWQQVNQAERMDLPKTQISLLQQIERKAQKEKAYGQVLAASLMASRLRTEIAPDSAEVELKRLKGKAKMVEGKDEVLSAIYNCVLGVIDRNEDAGNADEYFKKALANPSLLASQKAADFQPLVEIGKDDNIFKGDLLHVIGMQVGNYDKLHSYYKSVGNREAACYTALMGIEEKEESIPKLDSLMQEYSDLPISGEVAIQRYLCMGKDTPVEKKIAYIDDALVRWASWKRIVRLRNIRMSLTKPMFDARFDKSNVSSSEKNNWVRLNTRNLSNVTITVTRTRLAGDHRLSVNVEKDRDKLMASLLPATKQTIIRTYTGHKDYEEVKDSFLMPTLPLGVYLIKIESSNKDVLPEYAFYYVSDLYVMSEQQPKGLSRYVVVNVVDGQPVADVKVRATYAEYYGKPSVVKKQVTNKKGEVVFETESNAPKIYVATSKDKAFREVRLESSYDYSGRNYDNLVTEVFTDRSIYRPGQTVHASVIAYQNTKQGYKTKAAGGLTFDMILRDANYKEIGRKSVTTDSFGTAAADFELPTSGLTGRFSIKADYGTKGYESFSVDEYKRPTFDVSFDEYKDKYAIGDTIKLIGHAKSFAGVPVQGAKVHYVVTRNTSYWCSFYEDVASVNEQDVMTDDKGEFVVTVPFVLSDKVKKEIEAGNEDFRSLFYRFSVEASVTDAAGETHEGYASLPIGTKETFLSCNLPYENLRNSIKTIKFGYYNVAGNTLDGTVKYVIVPQQKDKSRYVYGNYTTVKANEEVAIKALSSGTYRLHAICGADTIDQDFIVFSLDDKRPVIETHDWFYLSGNQFPRDGGPIYMQVGSSDENQYVVYSIFSGDKVIETGAFNQSNSITTRKFIYKEEYGDEIFLNYAWVKNGILYRHSERISRPLPDKKLIVKWKTFRNKLTPGQQEEWTVTINRPDGKAANAQLMATLYDKSLDELMSHSWSFINFFSLNYTFAEWRSPRYGGIYLSADANLLYYNVDRLTFSKFDSRFLEEYDTPDAYIYSATSDRMVSMTRAVKSMAFAKESAMAEVAKVGHEDDNESDVKFTAPVIKKDEEIKQEKDKTKTVKPSMRENLNETAFFYPQLQTDGNGNVSIKFTLPESLTTWRFMGLAHDEDMNNGFLSDDIVAQKTLMVQPNMPRFVRMGDEVMLSARLFNLSEKDINAKAKIEILDPATEKVLFTDSKAVVLKAQGGGSATYSLASLLAKDANKLTADQSLLIVRFLVEGGGFSDGEQHYLSVLPNKEYVTNTYPFTQNEAGVKTIDISKLFPKKSTDQKLTVEYTNNPNWLMIQALPYISKTNDDNAISLVSAYYANYLGNHIMSTSPVIKQTIEQWKKESSKETSMMSALEKNQELKSLALNETPWVMEAKNESEQKQQLVRFFDANQLQNNLTSIFKKLKDLQQSDGSFSWWPEMKGSLYMTVAVTKTLARLQSITTPTPEQTDMIKASFRFMDKKVAKCVKEMKRYEKKYDTTLFPSDDLCDYLYTNALFYHDRSTNDIKYLIDRLTKMPTELTIYGKANTAVILQQYGRVEKARQYLQSIKEYTVYTEEKGRYFDSKNAYYSWRDYKIPTQVAAIEALKAIAPNDSKTLIEMQRWLLQEKRTQAWDTPLNSVNAVWAFTNKGNWLMQNGEHATLLLDNQPLQTTQPTAGLGYVKVSQPVDIQSPSRHELTINKTSTGTSWGAVYAQFFQASTDISAATSGMKIIREVLVDSVSFKKTMHLKVGDKVRIRLTIIADRDYDFVQVVDKRAACLEPVSQLSGYRWGYYIAPKDYTTNYYFDEMAKGKHVVETEYYVDRAGVYQTGTCTVQCAYAPEYSGRTGAMVIQVKE
>CP023864.1|AUI56560.1|1601384_1602005_-|radical-SAM-protein
MQSEITAPFIAINRHRLSTDGEGVTTLVGFHGCPLHCVYCLNPQCLQADGVWCRMTPGELYSEVEIDDLYFMATGGGICFGGGEPLLHSDFIKAFAAIMNPEWMLTIETSLNVQLERVKSVAPLIKLWYVDIKDMNPTIYKAYTCKDNALVISNLQWLAANGYADKVIIRLPLIPKYNTDKDRQESRQQLEKMGFTRFDTFNYIIR
>CP023864.1|AUI56561.1|1601989_1602691_-|membrane-receptor-RagA
MVKGKSTCKLLKSIRQQIANANGISYQPKECHYEGDCAGTCPACEAEIRYLETQLRERKRKGWGMKVAGLAAGICVATVPLTSCQNTPKACNVESKAQDSTDMLVQGETEVMPEAHTRDLKCSIAISGRVLNASSGQAASEVNVMIQGGKKRVSLGEDGRFALQVNRNDTLVFSSYGYIDKVIAVKSIRNPNDMVVRLEPSLAVVGGIDRAYLEKELADSAAPQSHKEKCNQK

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Crispr_ID: CP023864_26

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_26

1585655-1585804

Orphan

Consensus_repeat	Method
CTCCCCTCCTTCGGAGG	PILER-CR

3 spacers

The CRISPR arrays of CP023864_26

>merge|CP023864|26|1585655-1585804|PILER-CR
CCTCCGAAGGAGGGGAGGCCCAAGCTGCTAAATCCCCTACAATTCCTTCGAAGGAGGGGAGTACTAAACTGCTGGGACCTCCCCCAGCCCCTCCGAAGGAGGGGAGGCCCAAGCTGCTAAATCCCCTACAATTCCTTCGAAGGAGGGGAG

>CP023864|26|4|1585655-1585804|PILER-CR
CCTCCGAAGGAGGGGAG	GCCCAAGCTGCTAAATCCCCTACAATT
CCTTCGAAGGAGGGGAG	TACTAAACTGCTGGGACCTCCCCCAGCC
CCTCCGAAGGAGGGGAG	GCCCAAGCTGCTAAATCCCCTACAATT
CCTTCGAAGGAGGGGAG

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56548.1\|1576798_1577188_-\|diversity-generating-retroelement-protein-bAvd-family-protein	unknown	unknown	gnl\|CDD\|319868
CP023864.1\|AUI56544.1\|1569510_1569720_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56557.1\|1592887_1594096_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340952
CP023864.1\|AUI56553.1\|1585031_1585631_+\|DUF4738-domain-containing-protein	unknown	unknown	gnl\|CDD\|374200
CP023864.1\|AUI56559.1\|1595745_1601295_-\|alpha-2-macroglobulin	unknown	unknown	gnl\|CDD\|380081
CP023864.1\|AUI56550.1\|1577850_1580556_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372499
CP023864.1\|AUI56561.1\|1601989_1602691_-\|membrane-receptor-RagA	unknown	unknown	gnl\|CDD\|372685
CP023864.1\|AUI56562.1\|1602702_1603410_-\|membrane-receptor-RagA	unknown	unknown	gnl\|CDD\|274948
CP023864.1\|AUI56558.1\|1594572_1595580_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
CP023864.1\|AUI56551.1\|1580926_1581130_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56546.1\|1575040_1576132_-\|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|238828
CP023864.1\|AUI56563.1\|1603421_1604135_-\|membrane-receptor-RagA	unknown	unknown	gnl\|CDD\|274948
CP023864.1\|AUI56547.1\|1576217_1576802_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130684
CP023864.1\|AUI56549.1\|1577207_1577702_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56556.1\|1590768_1592184_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226584
CP023864.1\|AUI56545.1\|1571795_1574666_-\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319776
CP023864.1\|AUI56554.1\|1586102_1587149_-\|3-dehydroquinate-synthase	unknown	unknown	gnl\|CDD\|341474
CP023864.1\|AUI56555.1\|1587457_1590439_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379720
CP023864.1\|AUI56552.1\|1582544_1584074_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|225301
CP023864.1\|AUI56560.1\|1601384_1602005_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|274163

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56548.1\|1576798_1577188_-\|diversity-generating-retroelement-protein-bAvd-family-protein	gnl\|CDD\|319868	cd16376, Avd_like, diversity-generating retroelement protein bAvd and similar proteins. The bacterial accessory variability determinant (bAvd) protein, together with a reverse transcriptase, is involved in retrohoming processes as part of a diversity-generating retroelement (DGR), a type of system that is involved in generating sequence variation in bacterial proteins by inserting coding information from a template region into a variable region of a protein coding gene. bAvd forms homopentamers and interacts with the reverse transcriptase as well as with DNA and/or RNA.	8.35307e-25
CP023864.1\|AUI56557.1\|1592887_1594096_-\|MFS-transporter	gnl\|CDD\|340952	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of L-fucose permease (also called L-fucose-proton symporter) and similar proteins such as glucose/galactose transporter and N-acetyl glucosamine transporter NagP. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. Glucose/galactose transporter functions in the uptake of of glucose and galactose. The FucP-like subfamily belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.7007e-69
CP023864.1\|AUI56553.1\|1585031_1585631_+\|DUF4738-domain-containing-protein	gnl\|CDD\|374200	pfam15889, DUF4738, Domain of unknown function (DUF4738). Family of uncharacterized proteins found in CFB group of bacteria, mostly from Bacteroides and Prevotella genera present in human gut and oral cavity, respectively. JCSG target SP13584B, the experimentally determined structure consists of two WD40-like beta sheet repeats forming a beta sandwich.	5.57122e-39
CP023864.1\|AUI56559.1\|1595745_1601295_-\|alpha-2-macroglobulin	gnl\|CDD\|380081	pfam17973, bMG10, Bacterial Alpha-2-macroglobulin MG10 domain. Alpha-2-macroglobulins (A2Ms) are plasma proteins that trap and inhibit a broad range of proteases and are major components of the eukaryotic innate immune system. However, A2M-like proteins were identified in pathogenically invasive bacteria and species that colonize higher eukaryotes. Bacterial A2Ms are located in the periplasm where they are believed to provide protection to the cell by trapping external proteases through a covalent interaction with an activated thioester. This domain is found on the C-terminal region in A2Ms in bacteria. Structure analysis of Salmonella enterica ser A2Ms (SA-A2Ms) show that they are composed of 13 domains, all of which fold as variants of beta sandwiches with the exception of the TED, which consists of 14 alpha helices. Most of the beta sandwich domains appear to serve a structural role and are referred to as the macroglobulin-like (MG) domains. This is the MG10 domain. MG10 is markedly different from the other MG domains in that it has more beta strands and an alpha helix. The position of MG10 is stabilized by, in addition to other hydrogen bonds, the formation of a beta sheet with MG9.	5.35564e-29
CP023864.1\|AUI56550.1\|1577850_1580556_-\|hypothetical-protein	gnl\|CDD\|372499	pfam13149, Mfa_like_1, Fimbrillin-like. A family of putative fimbrillin proteins found by clustering human gut metagenomic sequences. Analysis of structural comparisons shows this family to be part of the FimbA (CL0450) superfamily of adhesin components or fimbrillins.	2.35791e-06
CP023864.1\|AUI56561.1\|1601989_1602691_-\|membrane-receptor-RagA	gnl\|CDD\|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	1.96705e-08
CP023864.1\|AUI56562.1\|1602702_1603410_-\|membrane-receptor-RagA	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	2.44152e-21
CP023864.1\|AUI56558.1\|1594572_1595580_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	2.94065e-121
CP023864.1\|AUI56546.1\|1575040_1576132_-\|RNA-directed-DNA-polymerase	gnl\|CDD\|238828	cd01651, RT_G2_intron, RT_G2_intron: Reverse transcriptases (RTs) with group II intron origin. RT transcribes DNA using RNA as template. Proteins in this subfamily are found in bacterial and mitochondrial group II introns. Their most probable ancestor was a retrotransposable element with both gag-like and pol-like genes. This subfamily of proteins appears to have captured the RT sequences from transposable elements, which lack long terminal repeats (LTRs).	1.59636e-22
CP023864.1\|AUI56563.1\|1603421_1604135_-\|membrane-receptor-RagA	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	2.07911e-23
CP023864.1\|AUI56547.1\|1576217_1576802_-\|hypothetical-protein	gnl\|CDD\|130684	TIGR01623, hypothetical_protein, putative zinc finger domain, LRP1 type. This model represents a putative zinc finger domain found in plants. Arabidopsis thaliana has at least 10 distinct members. Proteins containing this domain, including LRP1, generally share the same size, about 300 amino acids, and architecture. This 43-residue domain, and a more C-terminal companion domain of similar size, appear as tightly conserved islands of sequence similarity. The remainder consists largely of low-complexity sequence. Several animal proteins have regions with matching patterns of Cys, Gly, and His residues. These are not included in the model but score between trusted and noise cutoffs.	0.0050149
CP023864.1\|AUI56556.1\|1590768_1592184_+\|hypothetical-protein	gnl\|CDD\|226584	COG4099, COG4099, Predicted peptidase [General function prediction only].	4.14969e-08
CP023864.1\|AUI56545.1\|1571795_1574666_-\|cation-translocating-P-type-ATPase	gnl\|CDD\|319776	cd02081, P-type_ATPase_Ca_PMCA-like, animal plasma membrane Ca2(+)-ATPases (PMCA), similar to human ATP2B1-4/PMCA1-4, and related Ca2(+)-ATPases including Saccharomyces cerevisiae vacuolar PMC1. Animal PMCAs function to export Ca(2+) from cells and play a role in regulating Ca(2+) signals following stimulus induction and in preventing calcium toxicity. Many PMCA pump variants exist due to alternative splicing of transcripts. PMCAs are regulated by the binding of calmodulin or by kinase-mediated phosphorylation. Saccharomyces cerevisiae vacuolar transporter Pmc1p facilitates the accumulation of Ca2+ into vacuoles. Pmc1p is not regulated by direct calmodulin binding but responds to the calmodulin/calcineurin-signaling pathway and is controlled by the transcription factor complex Tcn1p/Crz1p. Similarly, the expression of the gene for Dictyostelium discoideum Ca(2+)-ATPase PAT1, patA, is under the control of a calcineurin-dependent transcription factor. Plant vacuolar Ca(2+)-ATPases, are regulated by direct-calmodulin binding. Plant Ca(2+)-ATPases are present at various cellular locations including the plasma membrane, endoplasmic reticulum, chloroplast and vacuole. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
CP023864.1\|AUI56554.1\|1586102_1587149_-\|3-dehydroquinate-synthase	gnl\|CDD\|341474	cd08195, DHQS, Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway, which involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds, is found in bacteria, microbial eukaryotes, and plants, but not in mammals. Therefore, enzymes of this pathway are attractive targets for the development of non-toxic antimicrobial compounds, herbicides and anti-parasitic agents. The activity of DHQS requires nicotinamide adenine dinucleotide (NAD) as cofactor. A single active site in DHQS catalyzes five sequential reactions involving alcohol oxidation, phosphate elimination, carbonyl reduction, ring opening, and intramolecular aldol condensation. The binding of substrates and ligands induces domain conformational changes. In some fungi and protozoa, this domain is fused with the other four domains in shikimate pathway and forms a penta-domain AROM protein, which catalyzes steps 2-6 in the shikimate pathway.	4.32629e-138
CP023864.1\|AUI56555.1\|1587457_1590439_+\|hypothetical-protein	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	4.81736e-27
CP023864.1\|AUI56552.1\|1582544_1584074_+\|diguanylate-cyclase	gnl\|CDD\|225301	COG2461, COG2461, Uncharacterized conserved protein [Function unknown].	4.67111e-118
CP023864.1\|AUI56560.1\|1601384_1602005_-\|radical-SAM-protein	gnl\|CDD\|274163	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA), benzylsuccinate synthase (BssD), gycerol dehydratase (DhaB2) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0 to 8 additional cysteines.	3.79817e-29

>CP023864.1|AUI56553.1|1585031_1585631_+|DUF4738-domain-containing-protein
MTRNILHIISLSLLLLGVTACKQERKSNDIITKIAPKPHVPSGTKAMDEFKYEKKVEWMGATYTIRIHRFADKSLSTVSDEDGRKYYDNKFQVQILRSDGSSFYDRTLTKDDFREFTDNQYAKNGALIGFMFDRAEGNKLYFGASVGSPDPKSDEYVPLDVTIDNMSRMRINKATQLDTPSDQPEQPKTEVDKSEEEGV
>CP023864.1|AUI56552.1|1582544_1584074_+|diguanylate-cyclase
MANKMKDYLPKIEMEKMQAMLELEEKYETGQLSLEEAREQMKTKVGKIRPYHLAFIEQNMKSREDDECIRADMRKIIELVEGFMDYSRPDVPEDHPLSHYYKENDEMRRLLLAVEDLIQYPMIKNQWLELYDQIRQYPIHYQRKQNQLYPLLEKKGFDRPTTTMWNFDDIIRDEIKESLRLLEANDEEAFIAAQSELIANARDLMEKEETILYPTSYALISPEEFEDMKAGDQEIGFAFFTVETPSSPNTHHSSPKEGFAEDLQALLSKYGYSAGPQQELDVATGKLTLEQINLIYQHLPIDISFVDENELVKFYSDTDHRIFPRSKNVIGRQVSNCHPRKSVHIVEEIVEKFRNGEQDKAEFWINKPEVFLYIVYFAVRDKQGRFRGVLEMMQDCTHIRELTGSQTLLTWAGKEEENASTTTTTDDKNDDAPTAQADKQIEITSDTRLKDLFEVYPHLKKELAARYPSFKMLNTPLGKLILKKATVRTAAERSGLGEERFIQLLKDCI
>CP023864.1|AUI56551.1|1580926_1581130_-|hypothetical-protein
MKKIRQTVRQLYVRPTVEVVKVETEGNFLAESPLVRPGGGGTTSHPGSIQVVPPTEEDGGDDDNLEG
>CP023864.1|AUI56550.1|1577850_1580556_-|hypothetical-protein
MNKLFFYACSALLAGGAALTAVSCADDDLDNGGTNGNDALVRFSVNDVQEGAISRGAMTRGAITPGLGSNDLAGGKLAAHSNRNIDVCLIETTVEGVNPVKADARTRADIIATSTLGDFSASGIRGTAASGILTTPEWFHAKKTKSNGELYSPIRWSFAQPKARFFAVYPNAESYAKMTINNTDATSGSPSVDFEVNSDVTKQVDLMTACTGDVEYATQFQQPTTNLDFRHALTGIRFAVGQNLSWNKTIDKVELRGAVMKSKYVLSKQFDGNGADWDHSSDTRGNATLSGVSVSTSANPNVTIMGNAGDNYTFYMIPQQLTGHVTAYVHCTDGTEITVPLKGEWKAGTTRTYKLSQTTSTWTYTLTPTDPSRAANYDETQSQAYGITSYREDPATHQQQAVAWKVVGYDANNDGTFSMSEKPAWLTSLSKTEGTGGTAADQGTATLTKDVTDLLAKRNKALKEATELGTATPYDLSTKGGSENRSTANSYVISAPGHYRIPLVYGNAIENGATNANSYTSHAAAGNSYVLYNFKDHNNQNITDPWIEKTNGAANNGVDGAEVVWADAANLVHSPSIVHDGGEGFLDFTVSASDIQSGNAVVAVKKGGTTVWSWHLWFAPKDALDKIPVTNYQGKVYNFTKETLGWKPTQWSGSTYDKARTVKVKVVQTIKNGGVAQETVINITQNPGNVKKGATTLYQFGRKDAFPGVDASELAANSHFTQSAGDNMSIMNGIQHPDNFYTWGSSWYSTPPTGYSYYNLWSAENTATGFNDNSVVKTVYDPCPVGFKMPASNAFTGFTANGQNGGTMNVYGTSDWQTYQNNFGHNFWTSSSKTATINFPASGYRSHNDGSLDYVGSLGYYWSAVPYSTISGCYLGFSSGGVSPVSSSARAYGFAARPVSE
>CP023864.1|AUI56549.1|1577207_1577702_-|hypothetical-protein
MNIKEIVEAEKKNTCRINLYREGLFFRAYEASAFALCSFVHPFKVIKRQLKVLNGEEVAYVGFPASSEDKYLNGRNIIESDDAHKVIGLTEPIDLNAFVEWKKGIELKESTQTGSMTSNSTMPESAGHIDAGSIIRMVRDFNVANSTPMQCMMFIAQLQGKLND
>CP023864.1|AUI56548.1|1576798_1577188_-|diversity-generating-retroelement-protein-bAvd-family-protein
MAQYDNLPVFKAIYDLLLDVYQRTRNVPRDLRYTLVQDLKNELVELMVMVYQVNSQREKEQILRRCLEVFVHIRLRIRLLKDMHHLSVPQFAQLCLQTESISKQLTAWHKYSQKGTNATKCTNKEEAGV
>CP023864.1|AUI56547.1|1576217_1576802_-|hypothetical-protein
MKQTLITTYNTIYAKHTDSFGCFVLMTLLVFLLSPLLTQAKPECQRLRSLTACISKSSNPPVHVKGTQTPRGNASWLVMLSQSVGWSHALISFLFHRITNGGGPHASFNEWLLFFPASGYRNNNDGSLNNVGNNGYYWSAVPNNTNNGCNLNFNSGNVNPLNNNNRTYGFAARPVSAFTAYRRGRDVDELNGNK
>CP023864.1|AUI56546.1|1575040_1576132_-|RNA-directed-DNA-polymerase
MKFEMNLEHNLMHLYDELRTRTYRPSPCICFITFDPVQREIFASSFKDRVVHHLLFNYIAPLFETTFIYDSYSCRVGKGTLKGVERFEHHLRSCTQNYTQSAYVLKLDIKGYFMSIPKRELRELLRKEMDRKPEWNKKFDRQLVDFLIDSILLRDPTSDVRIVGGKEDWEGLPPSKSLFRSAKGSGLPIGDLTSQLFSNIYLNQLDQFAKRQLGLKYYGRYVDDFYVIDTDHRKLARLIGLFRDYLHDELHLTLHPKKISLQHCSKGMTFLGAYIMPYRRYPRWRTICKFRNRMRLIEALCRCRTTMKEKQIFLLRSVINSFCGYLGHFSSYLLRKHLVDRNPFYRYFFFYGGFHVVGLKNIE
>CP023864.1|AUI56545.1|1571795_1574666_-|cation-translocating-P-type-ATPase
MEQKRHYEGLTDTEVLASREQHGANVLTPCEKDPLWKQFLEKFEDPLIIILLIAGFLSIAISCWEYWGLHSEDGVAVFFEPVGIFIAILLATSIAFYFELKADKEFSILNQANDEEEVEVIRNGNATTVAKKDIVVGDVVIINTGAEIPADGRLLEAISLYVDESTLNGESVPAYKSVKEEDFDKDASYATNQVLRGTKVMEGHGIFVVEAVGDSTENGKVFEAAQIDDSVKTPLSEQLDGLSELITKLSYVFAGCIIVGRLIVFFHWQPIVWTLSIPTLIFFWLVIKKFEGWKWFVNTFITIGYFLILMACVVVFHIMLLPEESMTGLLAHTLNTMMIAVTLIVVAVPEGLPMAVTLSLAYSMRRMMKTNNLVRKMHACETMGATTVICTDKTGTLTQNQMRVYQTQFYALDKQQLDESLAARLLMEGISVNSTASLDYSEKDKPEVLGSPTEGALLLWLNDHQISYREIRSNVQIVEELPFTTERKYMAVLVKSTLMEGKQILYVKGAPEIVYGLCKQTDCDVTKEDIERQLEEYQEQAMRTLGFAYQIVDGKEDVFKEGRVVADGLIFQGIVAISDPVRDDVPAAVADCMKAGIDVKIVTGDTSRTAKEIGRQIGLWTSSDSDKNIITGPEFAALSDAELDKRVEDLKIISRARPLDKKRLVESLQRCNEVVAVTGDGTNDAPALQAAHVGLSMGDGTSVAKEASDITIIDNSFSSIGKAVMWGRSLYQNIQRFLLFQLTVNVAACFLVLAGAFMGTESPLTVTQMLWVNLIMDTFAAMALASLPPSERVMKDAPRDRNAFIISRSMGWNILGVGGFFFVMLLALLYIFEHADITALKDIIHLQLGSTNGLSPYELTLLFTIFVMTHFFYLFNARAFETGRSALHFKGCRGLLFIVMIILIGQIAMVELPILQKFFNIAKGGLSLEDWIIIMLGSSLVLWVREAWHLIKPKKK
>CP023864.1|AUI56544.1|1569510_1569720_-|hypothetical-protein
MFIGYRVDKYLSIRTNKLTVIKMKKNLWFVFLLVLTDTVLRIRERKSGMNSRSDFFQLSPIAQLVRAPH
>CP023864.1|AUI56554.1|1586102_1587149_-|3-dehydroquinate-synthase
MKQNIIISKQFKSELATAISECEKDKIFVLVDETTRELCWELIKDDFCLKKAQVITIGTTDSNKTLDTLVAVWEALQQGGATRHSLLINLGGGMVTDLGGFAASTFKRGINFINIPTTLLAMVDASVGGKTGVNFGGLKNEIGVFNEANTVILNTDWLKTLDAANIRSGYAEMLKHGLIADEKMWAELINYNLADPDLLLLSGMLGRSVCVKERIVEEDPHEKGIRKSLNLGHTFGHAFESWALDHRPILHGYAVAFGLIAELYLSVVKTGFPTERMRQTVSFIRTYYGVLPITCNDYARLIELMHHDKKNRGDEINVTLLGGIGDIRINQSVSEEEVKEALDFVREG
>CP023864.1|AUI56555.1|1587457_1590439_+|hypothetical-protein
MVKRLLTFVLLLSGSISMLAQNRTITGSLYDGELKEKVPFAVVQLLKQDSSYVVGATSDEAGSFKITAPNNGRYILKASYVGYKTIFQNVTIANEQDVSVGQLDFQVDTRTLKEVKVVACAPKVVVKADTFQYNASAYRVPEGSTIEALVKRLPGAEVSSDGTIKINGKEVKKILVDGKEFMVGDTKTAMKNLPTSIIQTIKAYDQKSDLSRVTGIDDGNESTVLDFGIKLGMNKGLFSNIDLGIGTQNRYSEKAMGAYFNNKFRMMGFASANNVNDMGFGGGPRGGFGGVRQGLNATKMVGLNMNYDNGKTLQWDGSVRWNHADGDLNTRVASENFVARQGSFANRLSQEYTRSNSWDGRFRLEWRPDSVWNIMFRPNFRLSKSDGQIVSSSAAYNADPYETVDDPLSTAAIAQLKGLGLMGNTQRNMTISYGNTTALGAMLQVNRKLSSNGRNVTLRTDANYSNSDSKTFSTQDIQYFQLQDALGNDSTYRAYRYNLMPTKSWDYALQATYSEPIARKTYLQFSYQFKYGFSKSDRDTYDLSALPSGTFGSLKPAYRSWDNYLGLLTNPLGNYLDNNLSRYSEYRTYTHDVQVMMRMIRDKWKMNAGVMFQPQHSTYMQDYLGVHVDTARTVFNWSPTFDFRYKFSEQSNLRINYRGTIAQPTMSQLLSIVDNTDPQNISIGNPGLKPAFTNNFRLFYNTYKQSHAQALMTFANFSTTRNAIGNSVTYDAVTGARTIQPVNVNGNWEADAGLMYNMSIDSAGVWNIHSFSRANFNRYVSYLQLNRTSSLDKNITKSLSLGERLAASYRTSWLELELDGSVDYTNTKNNLQSMSNLRTWQFAYGGTLSLNLPWNMSISTDLHQTSRRGYSDASLNTNELLWNAQISQSMLKGNALTFSLQFYDILRQQSNLSRVINSVSRTDTEYNSINSYIMLRATYRLNLFGGKNAMPKPKDGPDFDRNGPGMGPRGGQRPPRGERPSGPSPSGGGFGGF
>CP023864.1|AUI56556.1|1590768_1592184_+|hypothetical-protein
MRQTNHFIIAVGLLFALSANTHIAHAQGRNMQEKVKNYFLQTLKTKQDEELKSKETYQRNRPYTTSIQQVMKANEIAKNQKMVWTAWCEANRALKEEKLAKPEDLRKGVKAAWHLPMTLEKEAVMPYYYGRKGSSEGKLPLFLYLHGSGPKEQEWSTGLALGNRFKDVPSLYFIPQIPNEGDYYRWWQVAKQFAWERLLRQALAEDNVDANRLYVFGISEGGYGSQRLASFYADYWAAAGPMAGGEPLKNAPIENCANIGFSFLTGADDTGFYRNILTYYTQVAFDSAQLARPMDADKRPLFVHRINLLPGMQHHINYDLTTPWLKNFVRNPYPKTVLWEDYEMDGRHRSGFYNLQVIASPTKNRTYYDMTIHDNVVRVSIREVEYTAVERDKQWGIEMKFNRNYTTAKGGRLRIYLNNELVDMAKPVTVIVNGQECYRKTVKPNLQDMINSCTEYYDPYRVYPASIEVSY
>CP023864.1|AUI56557.1|1592887_1594096_-|MFS-transporter
MKEQKSFLVPMAFLGLMFFTCGFALGINSLLVPVLKVSLSVSSMEAYMLIGATFLPFLIFGYPAGILISKIGYKRTMATAFGMFAIAFGAFIFSADAKSFPLFLTASFFCGTANTFLQAAINPYVTILGPTESAAKRISIMGMINKLAWPVSPLFIALFAGASGSVAIDDLGKPFAVIIFLFIALGVVALLSPLPEVKAAGEDSSETDEIDQEVSTYANSKKSVFQFPHLVLGAIAIFFYVGAETIVLGTLIDYANELGLTHPENYSWITPISISIGYIAGIILIPKYLSQTRALQICSFVALLGTALVVLLPGVYSIFSVGVMALGCSLMWPAFWPLALMDLGKFTKKGSSLLTMGLIGGAAITVLFGLLKDVSDARYAYGLCFVCFGYIMFYAFKGYKLR
>CP023864.1|AUI56558.1|1594572_1595580_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MLQIEIDNGSGFCFGVTTAIKKAEEELAKGTKLYCLGDIVHNSMEVERLTKKGLITINHEQMRELHDVKVLLRAHGEPPETYELARRNNIEIIDATCPVVLALQRRIKTQYEKGRQPSYMITSKGNTTVNDPSKLRPLTEGEDTTSSSSVSLPPAVGEGQTLSASSSIVIFGKNGHAEVLGLVGQTHSHAIVIEKFEDVKALDFTHDIYLYSQTTKSLDEFHKIIDYIQRHISPDAKFQSFDTICRQVANRMPNISTFAARHDLILFVAGRKSSNGKVLFHECLSVNPNSHQVESADEIDMNWFNGVETVGICGATSTPKWLMEECRDEILRYTK
>CP023864.1|AUI56559.1|1595745_1601295_-|alpha-2-macroglobulin
MRKSLIILSIIFLLLPISVTAQSFDALWQQVNQAERMDLPKTQISLLQQIERKAQKEKAYGQVLAASLMASRLRTEIAPDSAEVELKRLKGKAKMVEGKDEVLSAIYNCVLGVIDRNEDAGNADEYFKKALANPSLLASQKAADFQPLVEIGKDDNIFKGDLLHVIGMQVGNYDKLHSYYKSVGNREAACYTALMGIEEKEESIPKLDSLMQEYSDLPISGEVAIQRYLCMGKDTPVEKKIAYIDDALVRWASWKRIVRLRNIRMSLTKPMFDARFDKSNVSSSEKNNWVRLNTRNLSNVTITVTRTRLAGDHRLSVNVEKDRDKLMASLLPATKQTIIRTYTGHKDYEEVKDSFLMPTLPLGVYLIKIESSNKDVLPEYAFYYVSDLYVMSEQQPKGLSRYVVVNVVDGQPVADVKVRATYAEYYGKPSVVKKQVTNKKGEVVFETESNAPKIYVATSKDKAFREVRLESSYDYSGRNYDNLVTEVFTDRSIYRPGQTVHASVIAYQNTKQGYKTKAAGGLTFDMILRDANYKEIGRKSVTTDSFGTAAADFELPTSGLTGRFSIKADYGTKGYESFSVDEYKRPTFDVSFDEYKDKYAIGDTIKLIGHAKSFAGVPVQGAKVHYVVTRNTSYWCSFYEDVASVNEQDVMTDDKGEFVVTVPFVLSDKVKKEIEAGNEDFRSLFYRFSVEASVTDAAGETHEGYASLPIGTKETFLSCNLPYENLRNSIKTIKFGYYNVAGNTLDGTVKYVIVPQQKDKSRYVYGNYTTVKANEEVAIKALSSGTYRLHAICGADTIDQDFIVFSLDDKRPVIETHDWFYLSGNQFPRDGGPIYMQVGSSDENQYVVYSIFSGDKVIETGAFNQSNSITTRKFIYKEEYGDEIFLNYAWVKNGILYRHSERISRPLPDKKLIVKWKTFRNKLTPGQQEEWTVTINRPDGKAANAQLMATLYDKSLDELMSHSWSFINFFSLNYTFAEWRSPRYGGIYLSADANLLYYNVDRLTFSKFDSRFLEEYDTPDAYIYSATSDRMVSMTRAVKSMAFAKESAMAEVAKVGHEDDNESDVKFTAPVIKKDEEIKQEKDKTKTVKPSMRENLNETAFFYPQLQTDGNGNVSIKFTLPESLTTWRFMGLAHDEDMNNGFLSDDIVAQKTLMVQPNMPRFVRMGDEVMLSARLFNLSEKDINAKAKIEILDPATEKVLFTDSKAVVLKAQGGGSATYSLASLLAKDANKLTADQSLLIVRFLVEGGGFSDGEQHYLSVLPNKEYVTNTYPFTQNEAGVKTIDISKLFPKKSTDQKLTVEYTNNPNWLMIQALPYISKTNDDNAISLVSAYYANYLGNHIMSTSPVIKQTIEQWKKESSKETSMMSALEKNQELKSLALNETPWVMEAKNESEQKQQLVRFFDANQLQNNLTSIFKKLKDLQQSDGSFSWWPEMKGSLYMTVAVTKTLARLQSITTPTPEQTDMIKASFRFMDKKVAKCVKEMKRYEKKYDTTLFPSDDLCDYLYTNALFYHDRSTNDIKYLIDRLTKMPTELTIYGKANTAVILQQYGRVEKARQYLQSIKEYTVYTEEKGRYFDSKNAYYSWRDYKIPTQVAAIEALKAIAPNDSKTLIEMQRWLLQEKRTQAWDTPLNSVNAVWAFTNKGNWLMQNGEHATLLLDNQPLQTTQPTAGLGYVKVSQPVDIQSPSRHELTINKTSTGTSWGAVYAQFFQASTDISAATSGMKIIREVLVDSVSFKKTMHLKVGDKVRIRLTIIADRDYDFVQVVDKRAACLEPVSQLSGYRWGYYIAPKDYTTNYYFDEMAKGKHVVETEYYVDRAGVYQTGTCTVQCAYAPEYSGRTGAMVIQVKE
>CP023864.1|AUI56560.1|1601384_1602005_-|radical-SAM-protein
MQSEITAPFIAINRHRLSTDGEGVTTLVGFHGCPLHCVYCLNPQCLQADGVWCRMTPGELYSEVEIDDLYFMATGGGICFGGGEPLLHSDFIKAFAAIMNPEWMLTIETSLNVQLERVKSVAPLIKLWYVDIKDMNPTIYKAYTCKDNALVISNLQWLAANGYADKVIIRLPLIPKYNTDKDRQESRQQLEKMGFTRFDTFNYIIR
>CP023864.1|AUI56561.1|1601989_1602691_-|membrane-receptor-RagA
MVKGKSTCKLLKSIRQQIANANGISYQPKECHYEGDCAGTCPACEAEIRYLETQLRERKRKGWGMKVAGLAAGICVATVPLTSCQNTPKACNVESKAQDSTDMLVQGETEVMPEAHTRDLKCSIAISGRVLNASSGQAASEVNVMIQGGKKRVSLGEDGRFALQVNRNDTLVFSSYGYIDKVIAVKSIRNPNDMVVRLEPSLAVVGGIDRAYLEKELADSAAPQSHKEKCNQK
>CP023864.1|AUI56562.1|1602702_1603410_-|membrane-receptor-RagA
MVKGKSTCKLLKDIRQQIADANGISYQPKECHHKGDCAGTCPACEAEIRYLERELKARKGSGFGMKVAGIAAGICATVMPMTAAAQAVKSDSTANPPVQTTKKAPIKVVDLSDSCASPVIVRGMVIDEENKEPVIGAGVFIDGTNKGIATDIDGQFALKVPSDTSLVISYIGYEKQKVRVSSLLRSENNVIILKTDGNVMLGDLAVFTKTIYNDDVYGRRTYKVKSHKEKTKKCK
>CP023864.1|AUI56563.1|1603421_1604135_-|membrane-receptor-RagA
MTKGRSTCKLLKDIRQQIADANGISYRPKECQHKGDCAGTCPACEEEIRYLERELKARKGNGFGMKVAGIAAGICATVMPMTAAAQAVKSDSTANPPVQTTKKAPIKVVDLSDGCASPVVVRGMVIDEENKEPVIGAAVFIDGTRKGIVTDIDGQFALKVPPDTSLVISYIGYKTKKVHVSSLLHSDNNVIVLEDSREPMLDGIVTIATRPTSKDDLYGRRTYKPKSHKEKNKKKCK

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Crispr_ID: CP023864_27

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023864_27

1680700-1680789

Orphan

Consensus_repeat	Method
GTTACTCACTATGCTCAAACACCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023864_27

>merge|CP023864|27|1680700-1680789|CRISPRCasFinder
GTTACTCACTATGCTCAAACACCCCATTGCTTGAAGACCTTATCTCTGTCACGAATGTCAAAGAGCGTTACTCACTATGCTCAAACACCC

>CP023864|27|23|1680700-1680789|CRISPRCasFinder
GTTACTCACTATGCTCAAACACCC	CATTGCTTGAAGACCTTATCTCTGTCACGAATGTCAAAGAGC
GTTACTCACTATGCTCAAACACCC

Protein	Signature genes	Signature genes Name	Protein_function
CP023864.1\|AUI56623.1\|1681604_1682696_-\|aminoglycoside-phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|366736
CP023864.1\|AUI56631.1\|1694005_1694248_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56627.1\|1689678_1690653_-\|glycosidase	unknown	unknown	gnl\|CDD\|350107
CP023864.1\|AUI56612.1\|1669922_1670372_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56625.1\|1685118_1687215_-\|beta-N-acetylhexosaminidase	unknown	unknown	gnl\|CDD\|119333
CP023864.1\|AUI56621.1\|1678760_1680500_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372499
CP023864.1\|AUI56619.1\|1675542_1675833_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56629.1\|1691255_1691534_-\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56617.1\|1674380_1674944_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56626.1\|1687272_1689531_-\|alpha-mannosidase	unknown	unknown	gnl\|CDD\|377950
CP023864.1\|AUI56628.1\|1690851_1691259_-\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350310
CP023864.1\|AUI56616.1\|1673371_1674022_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|238038
CP023864.1\|AUI56614.1\|1671431_1671848_+\|hypothetical-protein	unknown	unknown	unknown
CP023864.1\|AUI56624.1\|1682892_1685043_-\|alpha-mannosidase	unknown	unknown	gnl\|CDD\|377950
CP023864.1\|AUI56620.1\|1675994_1677656_+\|IS5/IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372705
CP023864.1\|AUI56622.1\|1680954_1681608_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374294
CP023864.1\|AUI56630.1\|1692053_1692791_-\|toxin-antitoxin-system-protein	unknown	unknown	unknown
CP023864.1\|AUI56615.1\|1672470_1673091_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379352
CP023864.1\|AUI56613.1\|1670368_1671370_+\|penicillin-binding-protein	unknown	unknown	gnl\|CDD\|366362
CP023864.1\|AUI56618.1\|1675110_1675503_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP023864.1\|AUI56623.1\|1681604_1682696_-\|aminoglycoside-phosphotransferase-family-protein	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	3.11847e-13
CP023864.1\|AUI56622.1\|1680954_1681608_-\|hypothetical-protein	gnl\|CDD\|374294	pfam16011, CBM9_2, Carbohydrate-binding family 9. CBM9_2 is a family of putative endoxylanase-like proteins that belong to the Carbohydrate-binding family 9.	3.8185e-107
CP023864.1\|AUI56625.1\|1685118_1687215_-\|beta-N-acetylhexosaminidase	gnl\|CDD\|119333	cd06563, GH20_chitobiase-like, The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.	0
CP023864.1\|AUI56621.1\|1678760_1680500_+\|hypothetical-protein	gnl\|CDD\|372499	pfam13149, Mfa_like_1, Fimbrillin-like. A family of putative fimbrillin proteins found by clustering human gut metagenomic sequences. Analysis of structural comparisons shows this family to be part of the FimbA (CL0450) superfamily of adhesin components or fimbrillins.	0.00123831
CP023864.1\|AUI56626.1\|1687272_1689531_-\|alpha-mannosidase	gnl\|CDD\|377950	pfam07971, Glyco_hydro_92, Glycosyl hydrolase family 92. Members of this family are alpha-1,2-mannosidases, enzymes which remove alpha-1,2-linked mannose residues from Man(9)(GlcNAc)(2) by hydrolysis. They are critical for the maturation of N-linked oligosaccharides and ER-associated degradation.	0
CP023864.1\|AUI56627.1\|1689678_1690653_-\|glycosidase	gnl\|CDD\|350107	cd08993, GH130, Glycosyl hydrolase family 130. This subfamily contains glycosyl hydrolase family 130 (GH130) proteins, as classified by the carbohydrate-active enzymes database (CAZY), are phosphorylases and hydrolases for beta-mannosides, and include beta-1,4-mannosylglucose phosphorylase (EC 2.4.1.281), beta-1,4-mannooligosaccharide phosphorylase (EC 2.4.1.319), among others that have yet to be characterized. They possess 5-bladed beta-propeller domains similar to families 32, 43, 62, 68, 117 (GH32, GH43, GH62, GH68, GH117). GH130 enzymes are involved in the bacterial utilization of mannans or N-linked glycans. Beta-1,4-mannosylglucose phosphorylase is involved in degradation of beta-1,4-D-mannosyl-N-acetyl-D-glucosamine linkages in the core of N-glycans; it produces alpha-mannose 1-phosphate and glucose from 4-O-beta-D-mannosyl-D-glucose and inorganic phosphate, using a critical catalytic Asp as a proton donor. This family includes Ruminococcus albus 4-O-beta-D-mannosyl-D-glucose phosphorylase (RaMP1) and beta-(1,4)-mannooligosaccharide phosphorylase (RaMP2), enzymes that phosphorolyze beta-mannosidic linkages at the non-reducing ends of their substrates, and have substantially diverse substrate specificity that are determined by three loop regions.	2.59548e-159
CP023864.1\|AUI56624.1\|1682892_1685043_-\|alpha-mannosidase	gnl\|CDD\|377950	pfam07971, Glyco_hydro_92, Glycosyl hydrolase family 92. Members of this family are alpha-1,2-mannosidases, enzymes which remove alpha-1,2-linked mannose residues from Man(9)(GlcNAc)(2) by hydrolysis. They are critical for the maturation of N-linked oligosaccharides and ER-associated degradation.	0
CP023864.1\|AUI56620.1\|1675994_1677656_+\|IS5/IS1182-family-transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	7.90182e-40
CP023864.1\|AUI56628.1\|1690851_1691259_-\|PIN-domain-containing-protein	gnl\|CDD\|350310	cd18743, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	3.41801e-64
CP023864.1\|AUI56613.1\|1670368_1671370_+\|penicillin-binding-protein	gnl\|CDD\|366362	pfam00905, Transpeptidase, Penicillin binding protein transpeptidase domain. The active site serine is conserved in all members of this family.	1.7748e-27
CP023864.1\|AUI56615.1\|1672470_1673091_+\|hypothetical-protein	gnl\|CDD\|379352	pfam13730, HTH_36, Helix-turn-helix domain.	0.00265583
CP023864.1\|AUI56616.1\|1673371_1674022_+\|HNH-endonuclease	gnl\|CDD\|238038	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.	0.0089996

>CP023864.1|AUI56621.1|1678760_1680500_+|hypothetical-protein
MTIKSFYTLLLSATTVILASCSTETADERSATTGSETRSFVITEVQKPMTRTNISLTKPITWNAGDRLFAYNITSPRSDYDYLSVASDGFYSKFVGDIHWSDGDELAMFYPYIYEKRDSRMGVITLGLEENTVMDQGEVRKGHQNGTLENIRFFDYSWIKVKNIQSTGVYALANVSFEKQYSLVGFSVRYKGEPVKKIKRVTLSNVYTEAKFDLATGKMNYSPKGKLTITADSPVDTFYVALFPDEHFAPQFEIETVNGEKYYSAVKVPYNCQRAKYYFETLELTTCPWVDIDGKKWGKYNLQYEPCTNLKGWEPGYRLAKQAWDYFYTNPDPFNLYPDFLPRAFNTSAFDHFRWGNIAAAHNYSYCYSRYYSYYTGNLQAVIQNRCYGDLAFYASQGKWMLPTKADFDKLMAKTGEYIGYYQDGCNTVVGVLFDPTVPACKKGKVLDKNGRIIGITNRSTGIYVGKYNNHNTRLKNFSKDDIDKGVFLPFAGAYTEYNDGAPRLQRPGGQAYYWTSDANPCNYAQATAFSAYYMNNGWFYPGTVNACGSAHNPKYNMYNIRPVYASCTNEGVKTKNTK
>CP023864.1|AUI56620.1|1675994_1677656_+|IS5/IS1182-family-transposase
MTKVHFRSYIHKKMILFPQRIDKDIAEDDPVRLLDALVDNLMLDNVYKLYKPSGRKPYHPQMMLKVILYAYMNNIYSCRRIESLLKRDIHFIYLAGYEQPDFITINRFRNRVKKEINNIFTQVVLVLAAKGLISLDVEYIDGTKIESKANKYTFVWKRTVEKNRAKLQEQIRTLLLQVDDVIAQDNAAKTEGVEFTAALLDEISKELNKSLESAPEPKTKEEKQAVRTKKKQLKELENKRNKLQEYDQHLEIMGERNSYSKTDPDATFMHMEEDAMRNGQTKPGYNLQIATENQFITDFALYANRTDTLTLSSFLESFKSRYHRYAKTVVADSGYGSEENYLFMDVHNMEAYVKYNYFHKEQRPRYTPNPFSPASLYYNKEQDFYVCPMGQHMKRIGMKRSLTSNGFVTYSVRYQAERCDGCPLRGSCFKARGNRIIEVNHQLQHYKQKARELLTSEEGIKHRGRRCIEPEAVFGQTKYNKAYKRFRHFGKDKVNMDFAFFAIAFNIGKMCRKTNLKELKAVMEVLFVTFRYSIQVYIGYLKPNKSFYMKLAA
>CP023864.1|AUI56619.1|1675542_1675833_-|hypothetical-protein
MFLNGGGCGPLLQPLLEREEDAYRDKDCNGFIGVSRGLTRVARRLNKNGSKDCYKWFSGLLQMALRTNKKGLEGEHGWDKALMQTSEGLSTIGGVG
>CP023864.1|AUI56618.1|1675110_1675503_+|hypothetical-protein
MASSPQHASKHIEIATFEKADHCVSYLYHVDKRTKRLVYKIYCDDGSAITDLGSYKRSSKSLRIYEIYNASADSYLYVIYDVSTDKGYLTRTSSMEATLLKSSINLSEPSLSVKMRGTNRVVKIKLKRVF
>CP023864.1|AUI56617.1|1674380_1674944_+|hypothetical-protein
MKTRCKILIVLIQVLAFFSYIGCFVYLTYRADKRLIYVDIPVKYTRDAITGKEYGITITGNKGKHTVNLKSDSYPDKRFEATYFGSITYPQRSFDSIIASHPTSLGCYLEPDFKEKQQVYIPFVYAGQREKTSVYYLNLVSYVKWEYGFLWSFFSLFMVLMCLFTEKIDSSILAWIMVLSVIFSILT
>CP023864.1|AUI56616.1|1673371_1674022_+|HNH-endonuclease
MKILNKRQSKTNIEELTTLLDKYGIAYHTLPIRLIQEKIPLKDILVENSTYQSSKLKKRLIEEGIKQEHCEICGQGNTWNNKLLVLQLDHINGIHTDNRLENLRIVCPNCHTQTDTFCTRKLKQHNYCKDCGKEISPKSTWCPECALRHNRVHKVSPSDKPSKEELLQLIKKKPFTEIGRLYGVTDNAIRKWCKKMGLPSTKRELNTLYKKNTDRG
>CP023864.1|AUI56615.1|1672470_1673091_+|hypothetical-protein
MDYTTLSKEIGACLNPLQAYIYLGLCLHTDFKNDISNINQDTLAKFLQCDVGTIQRALRVFQENNLLTIYQDRYGWREKNRYKLIRTNWFGVKRKILKENITREQIGFLLLLKSLCYSHCNYTDYYGKDLQEIMTLKRSMIDNYLRALEAKQYIKRDKKKKRITILRDDLFLTTKESEKEKIMKLCPEVMGDNDYIDEYGQYHFVD
>CP023864.1|AUI56614.1|1671431_1671848_+|hypothetical-protein
MRKLILSLILLLFVCNIHAQSILKLKSYAKITQTNNPYHKTDRRIPSVVYLHKGGWWEVYSEGKHYTLYTEYTHEAEEGYYYRGFDNLGRRISVSFLNVSFLAGRLLYQLDIRYIETKNKFSVAYLIDGTEMPSALRF
>CP023864.1|AUI56613.1|1670368_1671370_+|penicillin-binding-protein
MKQSLLTILFTFVLVNASKAQQVTHIVHANGYLQRQVNSILSHNIKGLNAINGQVIIMDCKSGEIKAMVNLMNTKSGIKPAIRQLSEPTALMRTVSLLAVLEQGKVNQNDSIDTKAGMLDINGYLLEDYNWRRGANGKTSVQQGFLLSSNIATYLAVKQAFGKEYDRFYKAITNMGYGLPQNSFKAILPSPFNDISLAKFVNGKNQHISPLQILTFYNAIANNGKMVKPIFQKGDTTIIKEQVASKENITTIQQLLIQKRLTTKVFSDKIPIAGEQGVAVVKEDGDNTIYCLQFCGYYPSDNPQYSIIVSLNKKGLPASGGMAGEIVSQIFEL
>CP023864.1|AUI56612.1|1669922_1670372_+|hypothetical-protein
MPIKMINGFNEDKLFILYAYLCRYEHKIKGINTLKELTSMYPNLHKLESLISSFSCNIVKRESMPAMGLLALPNILYMTNSKNSKVLSFLTHIRNSIAHGQIMKEKDYIHIIDYSENKNTKEKIYTARGKVEIPKIEAILDLVIENVEL
>CP023864.1|AUI56622.1|1680954_1681608_-|hypothetical-protein
MKQLKVKRLECQQVKAADIPVLFKDNSVSYNKIDTVDWAAEFPYCPQVEFAIAHKGDAILLHYRVEEDSVRAEAGTDLGPVWQDSCCEFFCSPDEEGGYYNLESNCIGTVLLCNGQGRENRTHAPAAALEQIDRWASLGREPFEMREGRQAWELTLVVPVSSYFRHTIENLSGKTIRANFYKCGDKTSQPHFLSWNPIALPSPDFHCPAFFGELTFE
>CP023864.1|AUI56623.1|1681604_1682696_-|aminoglycoside-phosphotransferase-family-protein
MTNFNDVVSQFRIEGTVESVSPIGNGLINETLRVKTVDANTPDYILQRINNAIFTDVDLLQHNIELVTDHIRHKLMEKGETDIERKCLRFVQAKDGKTYYKDVDNRYWRVSVFIPNAVTKEEVNPESAFCCGETFGNFQNMLVDLKEPLGETIPDFHNMELRLRQLREAVSADKAGRVASVKDMIAELESYADEMCLAERLYREGALPKRICHCDTKVNNMMFDKDGKVLCVIDLDTVMPSFIFSDYGDFLRTGANHVAEDSDNYDAVGLKEDVFCSFTEGYLSTAGNFLTPVEISHLPYAVALFPYMQCVRFLTDYINGDVYFKVKYPEHNLVRSRNQLLLYRDVRRHDQMMADFVKKTLKQ
>CP023864.1|AUI56624.1|1682892_1685043_-|alpha-mannosidase
MKKRFLTLMAFAATSLFALAQDYTQYVDPFIGTGGHGHVFLGANVPFGNIQAGPTQKKQGWDWCSGYHYSDSTVIGFGQMHLSGTGIGDLGDVSLLPTTNPAQREVKFSHRAEHVTPGYYSVMLASGIRVELTATQRVAFHRYAFPADATKGYVILNLSQGIGWDKMTSCNFKQESAKTVSGYRMSQGWAKDQRVYFVAEFSQPVKLESNERDTIGVFAFDNAEQPLLVKVGISAVSVENARLNMQKELPGWDFRNAVAQAKDEWNRELSKIAIKTQDESARKIFYTALYHSMIAPSVFNDVNGEYRGADGKTHKGDFTDYTTFSLWDTYRAAHPLMTIIHPEKQRDIAQTMLHIFKEQGKLPVWHLVGNETDCMIGNPGVPALVDIALKGFDVDKNAVFEAAKASAMLDERGMGLLKKYGYIPCDLDPEHETVAKGLEYALADACIAKLAKELGKTADYKYFSKRSQSYRDFYFDKKTKFMRGVTSDRKFREPFDPFSTVHRQDDYAEGNAWQYVWLVPHDVHGLVSAFGGEKPFVSKLDSLFIVSGDMGAEASPDITGLIGQYAHGNEPSHHILYMYNYVGQPWKAADKIRYVLKNLYHDDFDGLSGNEDVGQMSAWYILSSLGMYQVEPAGGKYIFGTPLFDEATVNVGGGKTFRIVAHNNSDKNIYIQSAKLNGKPYTRSYIDFKDIKRGGTLEFVMGSKPSQFGVKPADRP
>CP023864.1|AUI56625.1|1685118_1687215_-|beta-N-acetylhexosaminidase
MIKKVFIGAAFLLLSASITQPVCAQSIIPQPESITRQQGTFTLAKGLQGVTNLKGEDFKILNQYTSDVMSIPFSSVKNPAADAPLRLICTGTEQEAAMAADSVSLQGYELNVTPTAMTIQARTPMGLFYGLQTLRQLEKDRQIPCVKITDTPRFAYRGLMIDCSRHFWSKDEIKKQLDAMAYFKLDRFHWHLTDGGGWRMEVKQYPRLTEETAYRTESDWTKWWNGKKRHYMPNPSRLVCWKGMNIHGGYYTQDDIKEIVDYAAARHITIIPEIEMPGHSDEVVYAYPELSCTGKPYTQSDLCVGKEQTYTFMENVLKEVMQLFPSKYIHIGGDEAERRTWKTCPDCQRVMKDYHLKDVAELQSHFTHRIERFLNDNGRKLLGWDEIMEGTLAPNAAVMSWRGTEAGLTAAKSGHHVVMAPQEFCYLNMYQDDPMTEPKAQGGYTRLEKTYNYDPIPAAYKGTSLEKYIDGVQGCVWTEFIEKPDHLEYMIYPRLLALAETGWTKQRTGYADFRQRVITATDALKRAGYNAFDIRKEKGARPESRSIVQHEALGKPVTYLGRYAEKYRAEGDSTLTNGLRGDWGYLEGRWQGFIDSTGVDVVVDMGKVTDIRDVRVDFMHLYESVIYTPETIELMVSDDGKNFKTIDTVRPGIKASEDYLVYPYKWKGDVKGRYVRVKALPREKGAWIFTDEIIVNQK
>CP023864.1|AUI56626.1|1687272_1689531_-|alpha-mannosidase
MKRNFLLGLLLSLSFLSLKAISKGGEEPVDLVNPFIGTSNFGTTNPGAVCPNGLMSVVPFNVMGSDLNKYDKDARWWSTPYEYHNVFFTGYSHVNLSGVGCPEVGSLLLMPTTGKLNVDYKEYGSTYEKEVAHPGYYSNYLKKYNVKTEVTATPRSSVARFTFPKGESHILLNLGEGLTNESGAMVKKVSDTEYEGVKLQGTFCYNPQAVFPIYFVMRVSKKPTEAGYWKKQRPMTGVEAEWDADNGKYKLYKTYNKELSGDDIGVWMNFNTEADEQVEVQMGVSFVSMANARENLDAEQRGKNFDAIRAEARAKWNDDLSRILVEGGTKTERTIFYTALYHVLIHPNILQDVNGQYPAMEGDEIRTVKEGNRYTVFSLWDTYRNVHQLLTLVYPNRQRDMIRSMIGMYEEHGWMPKWELFSRETYTMEGDPAIPVITDSWLKGLRGYDINKAYEAFRKSALTKGSENPLRPDNDEYMEKGYVALHEKFDNSVSHALEYYIADNALSRLAAALGKKDDARLFHNRALGYRHYFSKEFGLLRPLMPDGTFYKPFDPKQGENFEPSPGFHEGNAWNYTFYVPHDVMGLAKLMGGQKNFVNKLQSVFDKGYYDPANEPDIAYPHLFSYFKGDEWRTQVQTRRLLKEYFKNAPEGIPGNDDTGTMSAWAVFNMIGFYPDCPGDPSYTLTSPVFDKVTIRLDKAQWGRDNLLIETVRPNDEAVIIKKIELGGKPLNRYRITNDELLKGGVLKFYLKK
>CP023864.1|AUI56627.1|1689678_1690653_-|glycosidase
MKSLKDILPWEERPEGCKDVMWRYSKNPIIDRYHIPTSNSIFNSAVVPFEDGYAGVFRCDNKAVQMNIFAGFSKDGINWEINHEPIKFEAGNTEMIESEYKYDPRVTWIEDRYWITWCNGYHGPTIGIAYTFDFKKFYQCENAFLPFNRNGVLFPEKINGKYAMLSRPSDNGHTPFGDIYISFSPDMKYWGEHRCVMKVTPFPESAWQCTKIGAGSVPFLTDEGWLLFYHGVITTCNGFRYSMGAAILDKDNPEKVLYRTRPYLLAPNAPYELQGDVPNVVFPCAALQDGERVAVYYGAADTVVGMAFGYIKEIVEFTKNNSIL
>CP023864.1|AUI56628.1|1690851_1691259_-|PIN-domain-containing-protein
MKSKSQHGQVLLDSNVLIHLLRKNESVRQHILEIGWRNCCVSEISIVELLYGAECSAYPEKNRTLLKDLLNQLEIIPFSVCIEEFCRQKAVLRRKGQMIEDNDLYIASTALTLGIPVATENVKHLARIEGLEVQN
>CP023864.1|AUI56629.1|1691255_1691534_-|hypothetical-protein
MAGTMTNIENNTIRMYWNALRSMSKNIRLGLAVKLTNSVLEEERKEMSDEAYTEEMLNKFFGKWEGNETAEELMGIIKQNSSSSEPISFEGV
>CP023864.1|AUI56630.1|1692053_1692791_-|toxin-antitoxin-system-protein
MEELNQLLDFGESYPQFVAYHCFGDKATECLSSLQQPYKDIVTYNIVDLRPLECLAVFVFTDNAEVYMSEIDAFIKQYNSLVGSIFVLDLHPTSRYIVFKGRWKFYNIFTSHYYTLQDNILHFLMFFHNFMETKGIISMDFNDFRTCARLATYITSGTAPSLAQAIYPISPISHSDNIRTIMLGLQLQSLEENMLREDMKVLASFFEQLPENVEVKWQITPKCGHHHTEYIVGFDEDPMRDNDNS
>CP023864.1|AUI56631.1|1694005_1694248_+|hypothetical-protein
MNKIGFQIGSTGKEIEFSVEWELPKDKIKAETAIALSIQQFLSNTNKCKPTNIYFKDKDGNIIADRMELDKYMSLNYNEK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP023864_1	1.1\|5255\|53\|CP023864\|PILER-CR	5255-5307	53	CP023864.1	1480835-1480887	0	1.0
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	CP023864.1	1480782-1480807	0	1.0
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	CP023864.1	1480778-1480807	0	1.0
CP023864_4	4.10\|889823\|35\|CP023864\|CRT	889823-889857	35	CP023864.1	1701055-1701089	0	1.0
CP023864_23	23.9\|1495707\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495707-1495736	30	CP023864.1	1334-1363	0	1.0
CP023864_23	23.9\|1495707\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495707-1495736	30	CP023864.1	12857-12886	0	1.0
CP023864_23	23.9\|1495707\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495707-1495736	30	CP023864.1	35624-35653	0	1.0
CP023864_23	23.9\|1495707\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495707-1495736	30	CP023864.1	59373-59402	0	1.0
CP023864_23	23.9\|1495707\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495707-1495736	30	CP023864.1	1428655-1428684	0	1.0
CP023864_23	23.9\|1495707\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495707-1495736	30	CP023864.1	1477493-1477522	0	1.0
CP023864_23	23.9\|1495707\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495707-1495736	30	CP023864.1	1484788-1484817	0	1.0
CP023864_23	23.9\|1495707\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495707-1495736	30	CP023864.1	1698518-1698547	0	1.0
CP023864_23	23.9\|1495707\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495707-1495736	30	CP023864.1	1701788-1701817	0	1.0
CP023864_23	23.9\|1495707\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495707-1495736	30	CP023864.1	1705013-1705042	0	1.0
CP023864_26	26.1\|1585672\|27\|CP023864\|PILER-CR	1585672-1585698	27	CP023864.1	1585939-1585965	0	1.0
CP023864_26	26.3\|1585761\|27\|CP023864\|PILER-CR	1585761-1585787	27	CP023864.1	1585939-1585965	0	1.0
CP023864_4	4.10\|889823\|35\|CP023864\|CRT	889823-889857	35	CP023864.1	408-442	1	0.971
CP023864_4	4.10\|889823\|35\|CP023864\|CRT	889823-889857	35	CP023864.1	1485516-1485550	1	0.971
CP023864_4	4.10\|889823\|35\|CP023864\|CRT	889823-889857	35	CP023864.1	1704086-1704120	1	0.971
CP023864_23	23.9\|1495707\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495707-1495736	30	CP023864.1	1706696-1706725	1	0.967
CP023864_26	26.2\|1585716\|28\|CP023864\|PILER-CR	1585716-1585743	28	CP023864.1	1585983-1586010	1	0.964
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	CP023864.1	5169-5194	2	0.923
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	CP023864.1	1480948-1480973	2	0.923
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	CP023864.1	5169-5198	2	0.933
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	CP023864.1	1480944-1480973	2	0.933
CP023864_9	9.1\|1049163\|39\|CP023864\|CRISPRCasFinder	1049163-1049201	39	CP023864.1	863660-863698	2	0.949
CP023864_9	9.1\|1049163\|39\|CP023864\|CRISPRCasFinder	1049163-1049201	39	CP023864.1	910899-910937	2	0.949
CP023864_14	14.1\|1154683\|44\|CP023864\|CRISPRCasFinder	1154683-1154726	44	CP023864.1	1151787-1151830	2	0.955
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	CP023864.1	1104155-1104185	2	0.935

1. spacer 1.1|5255|53|CP023864|PILER-CR matches to position: 1480835-1480887, mismatch: 0, identity: 1.0

ggggtggtccctgactcgcaaaaacgagagaccacccccctgataatttcatc	CRISPR spacer
ggggtggtccctgactcgcaaaaacgagagaccacccccctgataatttcatc	Protospacer
*****************************************************

2. spacer 1.2|5368|26|CP023864|PILER-CR matches to position: 1480782-1480807, mismatch: 0, identity: 1.0

tctaaaataaataaatatcataattt	CRISPR spacer
tctaaaataaataaatatcataattt	Protospacer
**************************

3. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to position: 1480778-1480807, mismatch: 0, identity: 1.0

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tctaaaataaataaatatcataatttcaac	Protospacer
******************************

4. spacer 4.10|889823|35|CP023864|CRT matches to position: 1701055-1701089, mismatch: 0, identity: 1.0

cagaggtaacgagacggtaaccgtctcttctattc	CRISPR spacer
cagaggtaacgagacggtaaccgtctcttctattc	Protospacer
***********************************

5. spacer 23.9|1495707|30|CP023864|CRISPRCasFinder,PILER-CR matches to position: 1334-1363, mismatch: 0, identity: 1.0

ggtttttggatcttcgacccgaactttttt	CRISPR spacer
ggtttttggatcttcgacccgaactttttt	Protospacer
******************************

6. spacer 23.9|1495707|30|CP023864|CRISPRCasFinder,PILER-CR matches to position: 12857-12886, mismatch: 0, identity: 1.0

ggtttttggatcttcgacccgaactttttt	CRISPR spacer
ggtttttggatcttcgacccgaactttttt	Protospacer
******************************

7. spacer 23.9|1495707|30|CP023864|CRISPRCasFinder,PILER-CR matches to position: 35624-35653, mismatch: 0, identity: 1.0

ggtttttggatcttcgacccgaactttttt	CRISPR spacer
ggtttttggatcttcgacccgaactttttt	Protospacer
******************************

8. spacer 23.9|1495707|30|CP023864|CRISPRCasFinder,PILER-CR matches to position: 59373-59402, mismatch: 0, identity: 1.0

ggtttttggatcttcgacccgaactttttt	CRISPR spacer
ggtttttggatcttcgacccgaactttttt	Protospacer
******************************

9. spacer 23.9|1495707|30|CP023864|CRISPRCasFinder,PILER-CR matches to position: 1428655-1428684, mismatch: 0, identity: 1.0

ggtttttggatcttcgacccgaactttttt	CRISPR spacer
ggtttttggatcttcgacccgaactttttt	Protospacer
******************************

10. spacer 23.9|1495707|30|CP023864|CRISPRCasFinder,PILER-CR matches to position: 1477493-1477522, mismatch: 0, identity: 1.0

ggtttttggatcttcgacccgaactttttt	CRISPR spacer
ggtttttggatcttcgacccgaactttttt	Protospacer
******************************

11. spacer 23.9|1495707|30|CP023864|CRISPRCasFinder,PILER-CR matches to position: 1484788-1484817, mismatch: 0, identity: 1.0

ggtttttggatcttcgacccgaactttttt	CRISPR spacer
ggtttttggatcttcgacccgaactttttt	Protospacer
******************************

12. spacer 23.9|1495707|30|CP023864|CRISPRCasFinder,PILER-CR matches to position: 1698518-1698547, mismatch: 0, identity: 1.0

ggtttttggatcttcgacccgaactttttt	CRISPR spacer
ggtttttggatcttcgacccgaactttttt	Protospacer
******************************

13. spacer 23.9|1495707|30|CP023864|CRISPRCasFinder,PILER-CR matches to position: 1701788-1701817, mismatch: 0, identity: 1.0

ggtttttggatcttcgacccgaactttttt	CRISPR spacer
ggtttttggatcttcgacccgaactttttt	Protospacer
******************************

14. spacer 23.9|1495707|30|CP023864|CRISPRCasFinder,PILER-CR matches to position: 1705013-1705042, mismatch: 0, identity: 1.0

ggtttttggatcttcgacccgaactttttt	CRISPR spacer
ggtttttggatcttcgacccgaactttttt	Protospacer
******************************

15. spacer 26.1|1585672|27|CP023864|PILER-CR matches to position: 1585939-1585965, mismatch: 0, identity: 1.0

gcccaagctgctaaatcccctacaatt	CRISPR spacer
gcccaagctgctaaatcccctacaatt	Protospacer
***************************

16. spacer 26.3|1585761|27|CP023864|PILER-CR matches to position: 1585939-1585965, mismatch: 0, identity: 1.0

gcccaagctgctaaatcccctacaatt	CRISPR spacer
gcccaagctgctaaatcccctacaatt	Protospacer
***************************

17. spacer 4.10|889823|35|CP023864|CRT matches to position: 408-442, mismatch: 1, identity: 0.971

cagaggtaacgagacggtaaccgtctcttctattc	CRISPR spacer
cagaggtaacgagacggtaaccgtctcttcaattc	Protospacer
****************************** ****

18. spacer 4.10|889823|35|CP023864|CRT matches to position: 1485516-1485550, mismatch: 1, identity: 0.971

cagaggtaacgagacggtaaccgtctcttctattc	CRISPR spacer
cagaggtaacgagacggtaaccgtctcttcaattc	Protospacer
****************************** ****

19. spacer 4.10|889823|35|CP023864|CRT matches to position: 1704086-1704120, mismatch: 1, identity: 0.971

cagaggtaacgagacggtaaccgtctcttctattc	CRISPR spacer
cagaggtaacgagacggtaaccgtctcttcaattc	Protospacer
****************************** ****

20. spacer 23.9|1495707|30|CP023864|CRISPRCasFinder,PILER-CR matches to position: 1706696-1706725, mismatch: 1, identity: 0.967

ggtttttggatcttcgacccgaactttttt	CRISPR spacer
ggcttttggatcttcgacccgaactttttt	Protospacer
**.***************************

21. spacer 26.2|1585716|28|CP023864|PILER-CR matches to position: 1585983-1586010, mismatch: 1, identity: 0.964

tactaaactgctgggacctcccccagcc	CRISPR spacer
tactaaactgttgggacctcccccagcc	Protospacer
**********.*****************

22. spacer 1.2|5368|26|CP023864|PILER-CR matches to position: 5169-5194, mismatch: 2, identity: 0.923

tctaaaataaataaatatcataattt	CRISPR spacer
tctaaaataaataaatatcacacttt	Protospacer
********************.* ***

23. spacer 1.2|5368|26|CP023864|PILER-CR matches to position: 1480948-1480973, mismatch: 2, identity: 0.923

tctaaaataaataaatatcataattt	CRISPR spacer
tctaaaataaataaatatcacacttt	Protospacer
********************.* ***

24. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to position: 5169-5198, mismatch: 2, identity: 0.933

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tctaaaataaataaatatcacactttcaac	Protospacer
********************.* *******

25. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to position: 1480944-1480973, mismatch: 2, identity: 0.933

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tctaaaataaataaatatcacactttcaac	Protospacer
********************.* *******

26. spacer 9.1|1049163|39|CP023864|CRISPRCasFinder matches to position: 863660-863698, mismatch: 2, identity: 0.949

agttagaggcccctcccccgtcccctcccccgaagggaa	CRISPR spacer
agatagtggcccctcccccgtcccctcccccgaagggaa	Protospacer
** *** ********************************

27. spacer 9.1|1049163|39|CP023864|CRISPRCasFinder matches to position: 910899-910937, mismatch: 2, identity: 0.949

agttagaggcccctcccccgtcccctcccccgaagggaa	CRISPR spacer
agatagtggcccctcccccgtcccctcccccgaagggaa	Protospacer
** *** ********************************

28. spacer 14.1|1154683|44|CP023864|CRISPRCasFinder matches to position: 1151787-1151830, mismatch: 2, identity: 0.955

tcttcctcacatgggtatctcggtgatcactccccttccctccg	CRISPR spacer
tcttcctcacatgggtatttcggtgatcactccccttcccttcg	Protospacer
******************.**********************.**

29. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to position: 1104155-1104185, mismatch: 2, identity: 0.935

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
gtcagaggcccctcccccttcccctccccca	Protospacer
**.*************** ************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_AP018051	Prevotella melaninogenica strain GAI 07411 plasmid pPME0001, complete sequence	6860-6885	1	0.962
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_AP018051	Prevotella melaninogenica strain GAI 07411 plasmid pPME0001, complete sequence	7026-7051	1	0.962
CP023864_23	23.24\|1496860\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1496860-1496889	30	MG883710	Microviridae sp. isolate JTV1648, complete genome	2464-2493	1	0.967
CP023864_1	1.1\|5255\|53\|CP023864\|PILER-CR	5255-5307	53	NZ_AP018051	Prevotella melaninogenica strain GAI 07411 plasmid pPME0001, complete sequence	6945-6997	2	0.962
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_AP018051	Prevotella melaninogenica strain GAI 07411 plasmid pPME0001, complete sequence	6860-6889	2	0.933
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_AP018051	Prevotella melaninogenica strain GAI 07411 plasmid pPME0001, complete sequence	7026-7055	2	0.933
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	315470-315495	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	434687-434712	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	360446-360471	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NC_014634	Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequence	92384-92409	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	63625-63650	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	63666-63691	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	393454-393479	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_AP018256	Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome	379887-379912	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	69477-69502	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	LR214965	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11	59069-59094	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_CP011152	Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence	547830-547855	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_CP013043	Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence	55182-55207	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	KY979239	Flavobacterium phage V156, complete genome	45037-45062	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585306	Flavobacterium phage FCOV-F43, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585275	Flavobacterium phage FCOV-F4, complete genome	45554-45579	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585280	Flavobacterium phage FCOV-F12, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MK756088	Flavobacterium phage FCOV-F25, complete genome	45554-45579	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585285	Flavobacterium phage FCOV-F19, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MK756089	Flavobacterium phage FCOV-F27, complete genome	45605-45630	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585297	Flavobacterium phage FCOV-F33, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585274	Flavobacterium phage FCOV-F3, complete genome	45556-45581	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585315	Flavobacterium phage V189, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585277	Flavobacterium phage FCOV-F8, complete genome	45557-45582	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585300	Flavobacterium phage FCOV-F36, complete genome	45557-45582	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	KY979242	Flavobacterium phage V182, complete genome	45572-45597	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MK756084	Flavobacterium phage FCOV-F6, complete genome	45597-45622	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585273	Flavobacterium phage FCOV-F1, complete genome	45556-45581	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585298	Flavobacterium phage FCOV-F34, complete genome	45557-45582	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585286	Flavobacterium phage FCOV-F20, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585296	Flavobacterium phage FCOV-F32, complete genome	45556-45581	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585314	Flavobacterium phage V188, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585287	Flavobacterium phage FCOV-F21, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	KY992519	Flavobacterium phage V175, complete genome	45489-45514	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585299	Flavobacterium phage FCOV-F35, complete genome	45557-45582	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585279	Flavobacterium phage FCOV-F11, complete genome	45556-45581	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585295	Flavobacterium phage FCOV-F31, complete genome	45556-45581	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585304	Flavobacterium phage FCOV-F41, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585288	Flavobacterium phage FCOV-F22, complete genome	45557-45582	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585309	Flavobacterium phage FCOV-F48, complete genome	45566-45591	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585293	Flavobacterium phage FCOV-F29, complete genome	45556-45581	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585291	Flavobacterium phage FCOV-F26, complete genome	45556-45581	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585302	Flavobacterium phage FCOV-F39, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585284	Flavobacterium phage FCOV-F18, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585305	Flavobacterium phage FCOV-F42, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585290	Flavobacterium phage FCOV-F24, complete genome	45556-45581	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585311	Flavobacterium phage V183, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585278	Flavobacterium phage FCOV-F10, complete genome	45556-45581	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585294	Flavobacterium phage FCOV-F30, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585283	Flavobacterium phage FCOV-F17, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585301	Flavobacterium phage FCOV-F38, complete genome	45557-45582	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	KY979240	Flavobacterium phage V157, complete genome	45038-45063	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585303	Flavobacterium phage FCOV-F40, complete genome	45557-45582	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	KY979241	Flavobacterium phage V165, complete genome	45486-45511	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MK756083	Flavobacterium phage FCOV-F2, complete genome	45556-45581	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MK756085	Flavobacterium phage FCOV-F9, complete genome	45600-45625	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MK250019	Prevotella phage Lak-A2, complete genome	461103-461128	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	KY992520	Flavobacterium phage V181, complete genome	45486-45511	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585308	Flavobacterium phage FCOV-F47, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585292	Flavobacterium phage FCOV-F28, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585276	Flavobacterium phage FCOV-F7, complete genome	45556-45581	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585289	Flavobacterium phage FCOV-F23, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MK756090	Flavobacterium phage FCOV-F37, complete genome	45572-45597	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585312	Flavobacterium phage V184, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	MT585307	Flavobacterium phage FCOV-F44, complete genome	45559-45584	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	760076-760101	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_CP011154	Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence	590172-590197	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	587217-587242	4	0.846
CP023864_2	2.1\|191354\|26\|CP023864\|CRT	191354-191379	26	NZ_LR594664	Variovorax sp. RA8 plasmid 3	415338-415363	4	0.846
CP023864_2	2.2\|191398\|26\|CP023864\|CRT	191398-191423	26	MH552500	CrAssphage sp. isolate ctcc615, complete genome	14993-15018	4	0.846
CP023864_2	2.3\|191442\|25\|CP023864\|CRT	191442-191466	25	NC_008367	Phormidium phage Pf-WMP4, complete genome	16513-16537	4	0.84
CP023864_2	2.3\|191442\|25\|CP023864\|CRT	191442-191466	25	DQ875742	Cyanophage Pf-WMP4, complete genome	16513-16537	4	0.84
CP023864_2	2.7\|191617\|26\|CP023864\|CRT	191617-191642	26	NZ_MK715471	Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence	120748-120773	4	0.846
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_CP009118	Borreliella valaisiana Tom4006 plasmid cp26, complete sequence	12946-12971	5	0.808
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NC_010010	Bacillus megaterium QM B1551 plasmid pBM300, complete sequence	11717-11742	5	0.808
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_CP022448	Bacillus cereus C1L plasmid pC1L8, complete sequence	5469-5494	5	0.808
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_CP009691	Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence	252204-252229	5	0.808
CP023864_1	1.2\|5368\|26\|CP023864\|PILER-CR	5368-5393	26	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	17880-17905	5	0.808
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	315470-315499	5	0.833
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	434687-434716	5	0.833
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	360442-360471	5	0.833
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	63621-63650	5	0.833
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	63662-63691	5	0.833
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	393450-393479	5	0.833
CP023864_2	2.1\|191354\|26\|CP023864\|CRT	191354-191379	26	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	495681-495706	5	0.808
CP023864_2	2.5\|191529\|26\|CP023864\|CRT	191529-191554	26	MH431934	Paenibacillus phage Gryphonian, complete genome	23765-23790	5	0.808
CP023864_2	2.5\|191529\|26\|CP023864\|CRT	191529-191554	26	MH454082	Paenibacillus phage Genki, complete genome	23764-23789	5	0.808
CP023864_2	2.5\|191529\|26\|CP023864\|CRT	191529-191554	26	MH454077	Paenibacillus phage Bloom, complete genome	23743-23768	5	0.808
CP023864_2	2.5\|191529\|26\|CP023864\|CRT	191529-191554	26	MH431933	Paenibacillus phage DevRi, complete genome	23744-23769	5	0.808
CP023864_2	2.5\|191529\|26\|CP023864\|CRT	191529-191554	26	MH431932	Paenibacillus phage Arcticfreeze, complete genome	23744-23769	5	0.808
CP023864_2	2.5\|191529\|26\|CP023864\|CRT	191529-191554	26	NC_048718	Paenibacillus phage Jacopo, complete genome	23750-23775	5	0.808
CP023864_2	2.5\|191529\|26\|CP023864\|CRT	191529-191554	26	NC_048714	Paenibacillus phage Yerffej, complete genome	28631-28656	5	0.808
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NC_022051	Listeria monocytogenes strain J1926 plasmid, complete sequence	6982-7011	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP041212	Listeria monocytogenes strain LMP18-H2446 plasmid pCFSAN074383, complete sequence	29393-29422	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP020606	Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03 plasmid pLd2, complete sequence	4734-4763	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	CP044431	Listeria monocytogenes strain FDA00006667 plasmid pCFSAN038814, complete sequence	33471-33500	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP016704	Lactococcus lactis subsp. lactis strain UL8 plasmid pUL8A, complete sequence	4659-4688	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NC_022045	Listeria monocytogenes strain N1-011A plasmid, complete sequence	130575-130604	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NC_022046	Listeria monocytogenes strain J1776 plasmid, complete sequence	6918-6947	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NC_022047	Listeria monocytogenes strain J1817 plasmid, complete sequence	11713-11742	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP053631	Listeria monocytogenes strain OB040119 plasmid pOB040119, complete sequence	41703-41732	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NC_010901	Lactococcus lactis plasmid pNP40, complete sequence	42071-42100	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP043525	Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_01, complete sequence	6826-6855	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP043526	Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_02, complete sequence	27707-27736	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP053629	Listeria monocytogenes strain OB030029 plasmid pOB030029, complete sequence	41703-41732	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP053633	Listeria monocytogenes strain OB050226 plasmid pOB050226, complete sequence	41699-41728	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NC_015912	Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pVF21, complete sequence	18621-18650	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP023514	Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence	143045-143074	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NC_004966	Lactococcus lactis lactis bv. diacetylactis DPC220 plasmid pAH82, complete sequence	1357-1386	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	CP034583	Lactococcus lactis subsp. lactis strain C10 plasmid pC10C, complete sequence	4611-4640	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP014254	Listeria monocytogenes strain CFSAN023459 plasmid CFSAN023459_02, complete sequence	12778-12807	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NC_019350	Lactococcus lactis subsp. cremoris plasmid pAF14, complete sequence	9132-9161	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_MH382833	Listeria welshimeri strain 40/07 plasmid pLIS1, complete sequence	65827-65856	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP020834	Listeria monocytogenes strain CFSAN004330 plasmid pCFSAN004330, complete sequence	8389-8418	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP022021	Listeria monocytogenes strain FDA709873-33 plasmid pCFSAN021445, complete sequence	18635-18664	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	CP044433	Listeria monocytogenes strain FDA00009448 plasmid pCFSAN038814, complete sequence	40955-40984	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP016721	Lactococcus lactis subsp. lactis strain UC11 plasmid pUC11B, complete sequence	33253-33282	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP016726	Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08A, complete sequence	27097-27126	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP016727	Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08B, complete sequence	33253-33282	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NC_007191	Lactococcus lactis cremoris 712 plasmid pAG6, complete sequence	7149-7178	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP016716	Lactococcus lactis subsp. lactis strain UC063 plasmid pUC063B, complete sequence	13043-13072	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NC_015863	Lactococcus lactis subsp. lactis plasmid pIL5, complete sequence	3724-3753	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NC_003383	Listeria innocua Clip11262 plasmid pLI100, complete sequence	62125-62154	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NC_009435	Lactococcus lactis NCDO 1867 plasmid pGdh442, complete sequence	34614-34643	5	0.833
CP023864_23	23.29\|1497244\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497244-1497273	30	NZ_CP033741	Enterococcus sp. FDAARGOS_553 plasmid unnamed2, complete sequence	34937-34966	5	0.833
CP023864_23	23.42\|1498242\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1498242-1498271	30	NC_007765	Rhizobium etli CFN 42 plasmid p42e, complete sequence	212464-212493	5	0.833
CP023864_23	23.42\|1498242\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1498242-1498271	30	NZ_CP006989	Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence	156482-156511	5	0.833
CP023864_23	23.42\|1498242\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1498242-1498271	30	NZ_CP013554	Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence	168056-168085	5	0.833
CP023864_23	23.42\|1498242\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1498242-1498271	30	NZ_CP020909	Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence	212900-212929	5	0.833
CP023864_23	23.42\|1498242\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1498242-1498271	30	NC_021908	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence	211969-211998	5	0.833
CP023864_23	23.42\|1498242\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1498242-1498271	30	NZ_CP013565	Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence	168056-168085	5	0.833
CP023864_23	23.42\|1498242\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1498242-1498271	30	NZ_CP021126	Rhizobium sp. Kim5 plasmid pRetKim5b, complete sequence	174159-174188	5	0.833
CP023864_23	23.42\|1498242\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1498242-1498271	30	NC_010998	Rhizobium etli CIAT 652 plasmid pA, complete sequence	160723-160752	5	0.833
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	69477-69506	6	0.8
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	LR214965	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11	59069-59098	6	0.8
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NC_010010	Bacillus megaterium QM B1551 plasmid pBM300, complete sequence	11717-11746	6	0.8
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_CP011152	Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence	547830-547859	6	0.8
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_CP013043	Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence	55182-55211	6	0.8
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_CP011154	Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence	590168-590197	6	0.8
CP023864_2	2.1\|191354\|26\|CP023864\|CRT	191354-191379	26	JN638751	Bacillus phage G, complete genome	133489-133514	6	0.769
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	KX853513	Uncultured virus isolate Rctr41k, partial genome	3770-3800	6	0.806
CP023864_23	23.7\|1495553\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495553-1495582	30	NZ_CP049202	Escherichia coli strain PapRG-04-4 plasmid pIncFIB, complete sequence	8283-8312	6	0.8
CP023864_23	23.7\|1495553\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495553-1495582	30	MN270258	Streptococcus phage phi-SgaBSJ27_rum, complete genome	5378-5407	6	0.8
CP023864_23	23.7\|1495553\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495553-1495582	30	MN270259	Streptococcus phage phi-SgaBSJ31_rum, complete genome	5414-5443	6	0.8
CP023864_23	23.13\|1496014\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1496014-1496043	30	GQ981382	Shigella phage SP18, complete genome	137340-137369	6	0.8
CP023864_23	23.13\|1496014\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1496014-1496043	30	MK295203	Escherichia phage vB_EcoM_005, complete genome	3270-3299	6	0.8
CP023864_23	23.13\|1496014\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1496014-1496043	30	MT533174	Escherichia phage CJ20, complete genome	62483-62512	6	0.8
CP023864_23	23.13\|1496014\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1496014-1496043	30	KU878969	Escherichia phage MX01, complete genome	137091-137120	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP025427	Enterococcus faecium strain SC4 plasmid p2, complete sequence	43424-43453	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP041263	Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R2	54923-54952	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP027511	Enterococcus faecium strain AUSMDU00004055 plasmid unnamed5, complete sequence	39458-39487	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_LR135245	Enterococcus faecium isolate E6988 plasmid 3	57034-57063	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_LR135256	Enterococcus faecium isolate E7098 plasmid 3	60614-60643	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP038997	Enterococcus faecium strain SRR24 plasmid pSRR24	69492-69521	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP019989	Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence	60355-60384	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_LR135490	Enterococcus faecium isolate E8414 plasmid 3	57721-57750	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_LR135490	Enterococcus faecium isolate E8414 plasmid 3	119767-119796	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP044266	Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence	76943-76972	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_LR134109	Enterococcus faecium isolate E6043 plasmid 5	52212-52241	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP045014	Enterococcus faecium strain LAC7.2 plasmid pII, complete sequence	48521-48550	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP040742	Enterococcus faecium strain VRE1 plasmid pVRE1-VanA, complete sequence	31425-31454	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_AP022343	Enterococcus faecium strain KUHS13 plasmid pELF2	47672-47701	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP041272	Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S2	34850-34879	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP019994	Enterococcus faecium isolate 2014-VREF-268 plasmid p268-2	44971-45000	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP035656	Enterococcus faecium strain UAMSEF_09 plasmid unnamed2	47413-47442	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP035662	Enterococcus faecium strain UAMSEF_20 plasmid unnamed2	33834-33863	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP019971	Enterococcus faecium isolate 2014-VREF-114 plasmid p114-1 sequence	73084-73113	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP040238	Enterococcus faecium strain VB3025 plasmid unnamed2, complete sequence	110583-110612	6	0.8
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	NZ_CP012462	Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p2	45819-45848	6	0.8
CP023864_23	23.37\|1497859\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1497859-1497887	29	MN850609	Escherichia phage dhaeg, complete genome	64307-64335	6	0.793
CP023864_23	23.37\|1497859\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1497859-1497887	29	NC_010105	Enterobacteria phage JS98, complete genome	103086-103114	6	0.793
CP023864_23	23.37\|1497859\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1497859-1497887	29	MN850621	Escherichia phage dhabil, complete genome	138949-138977	6	0.793
CP023864_23	23.37\|1497859\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1497859-1497887	29	MH791409	UNVERIFIED: Escherichia phage EcWhh-1, complete genome	164840-164868	6	0.793
CP023864_23	23.37\|1497859\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1497859-1497887	29	KP007359	Enterobacteria phage vB_EcoM_VR5, complete genome	100569-100597	6	0.793
CP023864_23	23.37\|1497859\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1497859-1497887	29	NC_012741	Enterobacteria phage JS10, complete genome	102165-102193	6	0.793
CP023864_23	23.37\|1497859\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1497859-1497887	29	MK310184	Phage NC-G, complete genome	45917-45945	6	0.793
CP023864_23	23.37\|1497859\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1497859-1497887	29	EU863409	Enterobacteria phage JS10, complete sequence	102165-102193	6	0.793
CP023864_23	23.37\|1497859\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1497859-1497887	29	KT919973	Vibrio phage phi-ST2, complete genome	95229-95257	6	0.793
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NC_014634	Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequence	92380-92409	7	0.767
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NC_015919	Borreliella bissettii DN127 plasmid lp54, complete sequence	11518-11547	7	0.767
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MK250019	Prevotella phage Lak-A2, complete genome	461103-461132	7	0.767
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	760072-760101	7	0.767
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	587213-587242	7	0.767
CP023864_7	7.2\|1036358\|32\|CP023864\|PILER-CR	1036358-1036389	32	MN480762	Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence	179194-179225	7	0.781
CP023864_23	23.1\|1495093\|30\|CP023864\|CRISPRCasFinder	1495093-1495122	30	NZ_CP024309	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence	421164-421193	7	0.767
CP023864_23	23.11\|1495861\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1495861-1495889	29	GU323318	Enterobacteria phage CC31, complete genome	36419-36447	7	0.759
CP023864_23	23.11\|1495861\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1495861-1495889	29	LT614807	Cronobacter phage Pet-CM3-4 genome assembly, chromosome: I	36230-36258	7	0.759
CP023864_23	23.20\|1496552\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1496552-1496581	30	NC_002111	Riemerella anatipestifer 10 plasmid pCFC1, complete sequence	2605-2634	7	0.767
CP023864_23	23.26\|1497014\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497014-1497043	30	MN694374	Marine virus AFVG_250M614, complete genome	20369-20398	7	0.767
CP023864_23	23.26\|1497014\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497014-1497043	30	NC_023007	Bacillus phage vB_BanS-Tsamsa, complete genome	75846-75875	7	0.767
CP023864_23	23.26\|1497014\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497014-1497043	30	MN871444	UNVERIFIED: Serratia phage KpGz_1, complete genome	19723-19752	7	0.767
CP023864_23	23.27\|1497091\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1497091-1497119	29	NC_029065	Pseudomonas phage VCM genome assembly VCM, chromosome : 1	36827-36855	7	0.759
CP023864_23	23.30\|1497321\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497321-1497350	30	MN693029	Marine virus AFVG_117M56, complete genome	50353-50382	7	0.767
CP023864_23	23.30\|1497321\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497321-1497350	30	MN692985	Marine virus AFVG_117M57, complete genome	50496-50525	7	0.767
CP023864_23	23.31\|1497398\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497398-1497427	30	MF360958	Salicola phage SCTP-2, complete genome	354938-354967	7	0.767
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	MN693972	Marine virus AFVG_250M605, complete genome	26498-26527	7	0.767
CP023864_23	23.37\|1497859\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1497859-1497887	29	NC_011251	Borrelia duttonii Ly plasmid pl41, complete sequence	37014-37042	7	0.759
CP023864_23	23.37\|1497859\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1497859-1497887	29	NC_011257	Borrelia duttonii Ly plasmid pl23, complete sequence	21740-21768	7	0.759
CP023864_23	23.38\|1497935\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1497935-1497963	29	NC_007762	Rhizobium etli CFN 42 plasmid p42a, complete sequence	46893-46921	7	0.759
CP023864_23	23.39\|1498011\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1498011-1498040	30	NZ_CP039454	Enterobacter bugandensis strain 220 plasmid pSurvcare220, complete sequence	3377-3406	7	0.767
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_CP009118	Borreliella valaisiana Tom4006 plasmid cp26, complete sequence	12946-12975	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	KY979239	Flavobacterium phage V156, complete genome	45037-45066	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585306	Flavobacterium phage FCOV-F43, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585275	Flavobacterium phage FCOV-F4, complete genome	45554-45583	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585280	Flavobacterium phage FCOV-F12, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MK756088	Flavobacterium phage FCOV-F25, complete genome	45554-45583	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585285	Flavobacterium phage FCOV-F19, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MK756089	Flavobacterium phage FCOV-F27, complete genome	45605-45634	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585297	Flavobacterium phage FCOV-F33, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585274	Flavobacterium phage FCOV-F3, complete genome	45556-45585	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585315	Flavobacterium phage V189, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585277	Flavobacterium phage FCOV-F8, complete genome	45557-45586	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585300	Flavobacterium phage FCOV-F36, complete genome	45557-45586	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	KY979242	Flavobacterium phage V182, complete genome	45572-45601	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MK756084	Flavobacterium phage FCOV-F6, complete genome	45597-45626	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585273	Flavobacterium phage FCOV-F1, complete genome	45556-45585	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585298	Flavobacterium phage FCOV-F34, complete genome	45557-45586	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585286	Flavobacterium phage FCOV-F20, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585296	Flavobacterium phage FCOV-F32, complete genome	45556-45585	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585314	Flavobacterium phage V188, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585287	Flavobacterium phage FCOV-F21, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	KY992519	Flavobacterium phage V175, complete genome	45489-45518	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585299	Flavobacterium phage FCOV-F35, complete genome	45557-45586	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585279	Flavobacterium phage FCOV-F11, complete genome	45556-45585	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585295	Flavobacterium phage FCOV-F31, complete genome	45556-45585	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585304	Flavobacterium phage FCOV-F41, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585288	Flavobacterium phage FCOV-F22, complete genome	45557-45586	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585309	Flavobacterium phage FCOV-F48, complete genome	45566-45595	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585293	Flavobacterium phage FCOV-F29, complete genome	45556-45585	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585291	Flavobacterium phage FCOV-F26, complete genome	45556-45585	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585302	Flavobacterium phage FCOV-F39, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585284	Flavobacterium phage FCOV-F18, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585305	Flavobacterium phage FCOV-F42, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585290	Flavobacterium phage FCOV-F24, complete genome	45556-45585	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585311	Flavobacterium phage V183, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585278	Flavobacterium phage FCOV-F10, complete genome	45556-45585	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585294	Flavobacterium phage FCOV-F30, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585283	Flavobacterium phage FCOV-F17, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585301	Flavobacterium phage FCOV-F38, complete genome	45557-45586	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	KY979240	Flavobacterium phage V157, complete genome	45038-45067	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585303	Flavobacterium phage FCOV-F40, complete genome	45557-45586	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	KY979241	Flavobacterium phage V165, complete genome	45486-45515	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MK756083	Flavobacterium phage FCOV-F2, complete genome	45556-45585	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MK756085	Flavobacterium phage FCOV-F9, complete genome	45600-45629	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	KY992520	Flavobacterium phage V181, complete genome	45486-45515	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585308	Flavobacterium phage FCOV-F47, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585292	Flavobacterium phage FCOV-F28, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585276	Flavobacterium phage FCOV-F7, complete genome	45556-45585	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585289	Flavobacterium phage FCOV-F23, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MK756090	Flavobacterium phage FCOV-F37, complete genome	45572-45601	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585312	Flavobacterium phage V184, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MT585307	Flavobacterium phage FCOV-F44, complete genome	45559-45588	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	MN693301	Marine virus AFVG_25M27, complete genome	4187-4216	8	0.733
CP023864_5	5.11\|971699\|37\|CP023864\|CRT	971699-971735	37	NZ_CP026928	Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence	44856-44892	8	0.784
CP023864_7	7.2\|1036358\|32\|CP023864\|PILER-CR	1036358-1036389	32	MK448740	Streptococcus phage Javan367, complete genome	2107-2138	8	0.75
CP023864_7	7.2\|1036358\|32\|CP023864\|PILER-CR	1036358-1036389	32	NC_010945	Streptococcus phage PH15, complete genome	2742-2773	8	0.75
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	NZ_CP016313	Thermus brockianus strain GE-1 plasmid pTB1, complete sequence	339247-339277	8	0.742
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	MH729818	Escherichia phage LL11, complete genome	44822-44852	8	0.742
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	425069-425099	8	0.742
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	NC_016588	Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence	134720-134750	8	0.742
CP023864_21	21.1\|1419460\|30\|CP023864\|CRISPRCasFinder	1419460-1419489	30	NC_049978	IAS virus, complete genome	53685-53714	8	0.733
CP023864_23	23.1\|1495093\|30\|CP023864\|CRISPRCasFinder	1495093-1495122	30	NC_023282	Streptomyces sp. FR1 plasmid pFRL2, complete sequence	69054-69083	8	0.733
CP023864_23	23.1\|1495093\|30\|CP023864\|CRISPRCasFinder	1495093-1495122	30	NZ_CP020952	Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence	306197-306226	8	0.733
CP023864_23	23.1\|1495093\|30\|CP023864\|CRISPRCasFinder	1495093-1495122	30	NZ_CP032328	Azospirillum brasilense strain MTCC4035 plasmid p7, complete sequence	78874-78903	8	0.733
CP023864_23	23.11\|1495861\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1495861-1495889	29	MN617835	Enterobacter phage prasa_myo, complete genome	38377-38405	8	0.724
CP023864_23	23.11\|1495861\|29\|CP023864\|CRISPRCasFinder,PILER-CR	1495861-1495889	29	MG999954	Enterobacter phage myPSH1140, complete genome	38377-38405	8	0.724
CP023864_23	23.12\|1495937\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495937-1495966	30	NC_049963	Bacillus phage Juan, complete genome	9769-9798	8	0.733
CP023864_23	23.12\|1495937\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495937-1495966	30	NC_031121	Bacillus phage Aurora, complete genome	10153-10182	8	0.733
CP023864_23	23.12\|1495937\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495937-1495966	30	NZ_CP030933	Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence	402926-402955	8	0.733
CP023864_23	23.26\|1497014\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497014-1497043	30	NZ_LT960615	Hartmannibacter diazotrophicus strain E19T plasmid HDIAp1, complete sequence	40457-40486	8	0.733
CP023864_23	23.28\|1497167\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497167-1497196	30	NC_004584	Streptococcus prophage 315.1, complete genome	10090-10119	8	0.733
CP023864_23	23.28\|1497167\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497167-1497196	30	MK448978	Streptococcus phage Javan532, complete genome	9985-10014	8	0.733
CP023864_23	23.28\|1497167\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497167-1497196	30	MK448785	Streptococcus phage Javan507, complete genome	9985-10014	8	0.733
CP023864_23	23.32\|1497475\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497475-1497504	30	NZ_CP025015	Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence	411247-411276	8	0.733
CP023864_23	23.42\|1498242\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1498242-1498271	30	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1575424-1575453	8	0.733
CP023864_23	23.42\|1498242\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1498242-1498271	30	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	493761-493790	8	0.733
CP023864_1	1.3\|5335\|30\|CP023864\|CRISPRCasFinder	5335-5364	30	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	17876-17905	9	0.7
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	NZ_CP013577	Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence	293481-293511	9	0.71
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	NZ_CP013549	Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence	293851-293881	9	0.71
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	NC_023284	Streptomyces sp. F2 plasmid pFRL4, complete sequence	372437-372467	9	0.71
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	NZ_CP013534	Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence	293851-293881	9	0.71
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	NZ_CP013545	Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence	293846-293876	9	0.71
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	NZ_CP013571	Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence	293481-293511	9	0.71
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	NZ_CP044073	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence	132387-132417	9	0.71
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	NC_016588	Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence	134738-134768	9	0.71
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	NC_016588	Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence	179469-179499	9	0.71
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	MN693707	Marine virus AFVG_250M784, complete genome	4-34	9	0.71
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	MN693707	Marine virus AFVG_250M784, complete genome	38571-38601	9	0.71
CP023864_18	18.1\|1347689\|31\|CP023864\|CRISPRCasFinder	1347689-1347719	31	MK249228	Blackfly microvirus SF02 isolate 190, complete genome	2810-2840	9	0.71
CP023864_23	23.3\|1495247\|30\|CP023864\|CRISPRCasFinder	1495247-1495276	30	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	294836-294865	9	0.7
CP023864_23	23.12\|1495937\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1495937-1495966	30	NZ_CP034112	Staphylococcus epidermidis strain CDC120 plasmid pSTA491, complete sequence	43105-43134	9	0.7
CP023864_23	23.16\|1496245\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1496245-1496274	30	NZ_CP047900	Pseudarthrobacter sp. YJ56 plasmid unnamed2, complete sequence	1723-1752	9	0.7
CP023864_23	23.28\|1497167\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497167-1497196	30	NC_017209	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT14, complete sequence	3540-3569	9	0.7
CP023864_23	23.28\|1497167\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497167-1497196	30	NZ_CP004883	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB14, complete sequence	12882-12911	9	0.7
CP023864_23	23.28\|1497167\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497167-1497196	30	NZ_CP015151	Bacillus thuringiensis strain Bc601 plasmid pBTBC1, complete sequence	2513-2542	9	0.7
CP023864_23	23.28\|1497167\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497167-1497196	30	CP020760	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-21, complete sequence	7294-7323	9	0.7
CP023864_23	23.28\|1497167\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497167-1497196	30	NC_005567	Bacillus thuringiensis H1.1 plasmid pGI3, complete sequence	5238-5267	9	0.7
CP023864_23	23.36\|1497782\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497782-1497811	30	AB823818	Phage phi OH2 DNA, complete genome	21289-21318	9	0.7
CP023864_23	23.39\|1498011\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1498011-1498040	30	MG251388	Pseudomonas phage Psp6, complete genome	22570-22599	9	0.7
CP023864_11	11.1\|1103343\|33\|CP023864\|CRISPRCasFinder	1103343-1103375	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3029998-3030030	10	0.697
CP023864_23	23.16\|1496245\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1496245-1496274	30	AP014720	Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8	10547-10576	10	0.667
CP023864_23	23.31\|1497398\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497398-1497427	30	AP019525	Tenacibaculum phage PTm5 DNA, complete genome	124527-124556	10	0.667
CP023864_23	23.31\|1497398\|30\|CP023864\|CRISPRCasFinder,PILER-CR	1497398-1497427	30	AP019524	Tenacibaculum phage PTm1 DNA, complete genome	124417-124446	10	0.667
CP023864_5	5.19\|972251\|37\|CP023864\|CRT	972251-972287	37	KX557278	Gordonia phage Ghobes, complete genome	14329-14365	11	0.703

1. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_AP018051 (Prevotella melaninogenica strain GAI 07411 plasmid pPME0001, complete sequence) position: , mismatch: 1, identity: 0.962

tctaaaataaataaatatcataattt	CRISPR spacer
tctaaaataaataaatatcacaattt	Protospacer
********************.*****

2. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_AP018051 (Prevotella melaninogenica strain GAI 07411 plasmid pPME0001, complete sequence) position: , mismatch: 1, identity: 0.962

tctaaaataaataaatatcataattt	CRISPR spacer
tctaaaataaataaatatcacaattt	Protospacer
********************.*****

3. spacer 23.24|1496860|30|CP023864|CRISPRCasFinder,PILER-CR matches to MG883710 (Microviridae sp. isolate JTV1648, complete genome) position: , mismatch: 1, identity: 0.967

tatggatgatttccgtcaactcgtccgaaa	CRISPR spacer
tatggatgatttccgtcaactcgtccgtaa	Protospacer
*************************** **

4. spacer 1.1|5255|53|CP023864|PILER-CR matches to NZ_AP018051 (Prevotella melaninogenica strain GAI 07411 plasmid pPME0001, complete sequence) position: , mismatch: 2, identity: 0.962

ggggtggtccctgactcgcaaaaacgagagaccacccccctgataatttcatc	CRISPR spacer
ggggtggtccctggctcgcaaaaacgagagaccacccccctgataatttcatt	Protospacer
*************.**************************************.

5. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_AP018051 (Prevotella melaninogenica strain GAI 07411 plasmid pPME0001, complete sequence) position: , mismatch: 2, identity: 0.933

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tctaaaataaataaatatcacaatttcaat	Protospacer
********************.********.

6. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_AP018051 (Prevotella melaninogenica strain GAI 07411 plasmid pPME0001, complete sequence) position: , mismatch: 2, identity: 0.933

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tctaaaataaataaatatcacaatttcaat	Protospacer
********************.********.

7. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
aataaaataaataaatattagaattt	Protospacer
  ****************.* *****

8. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
aataaaataaataaatattagaattt	Protospacer
  ****************.* *****

9. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
aataaaataaataaatattagaattt	Protospacer
  ****************.* *****

10. spacer 1.2|5368|26|CP023864|PILER-CR matches to NC_014634 (Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequence) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
aataaaataaataaagttcataattt	Protospacer
  *************  *********

11. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
aataaaataaataaatattagaattt	Protospacer
  ****************.* *****

12. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
aataaaataaataaatattagaattt	Protospacer
  ****************.* *****

13. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
aataaaataaataaatattagaattt	Protospacer
  ****************.* *****

14. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_AP018256 (Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
aataaaataaattaatataataattt	Protospacer
  ********** ***** *******

15. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
ttaataataaataaatttcataattt	Protospacer
*. * *********** *********

16. spacer 1.2|5368|26|CP023864|PILER-CR matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
ttaataataaataaatttcataattt	Protospacer
*. * *********** *********

17. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataacataaaaaaatatcataatta	Protospacer
* *** ***** *************

18. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_CP013043 (Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcat---aattt	CRISPR spacer
tctaatataaataaatatcattcaaa---	Protospacer
***** ***************   **

19. spacer 1.2|5368|26|CP023864|PILER-CR matches to KY979239 (Flavobacterium phage V156, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

20. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585306 (Flavobacterium phage FCOV-F43, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

21. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585275 (Flavobacterium phage FCOV-F4, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

22. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585280 (Flavobacterium phage FCOV-F12, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

23. spacer 1.2|5368|26|CP023864|PILER-CR matches to MK756088 (Flavobacterium phage FCOV-F25, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

24. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585285 (Flavobacterium phage FCOV-F19, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

25. spacer 1.2|5368|26|CP023864|PILER-CR matches to MK756089 (Flavobacterium phage FCOV-F27, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

26. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585297 (Flavobacterium phage FCOV-F33, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

27. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585274 (Flavobacterium phage FCOV-F3, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

28. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585315 (Flavobacterium phage V189, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

29. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585277 (Flavobacterium phage FCOV-F8, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

30. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585300 (Flavobacterium phage FCOV-F36, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

31. spacer 1.2|5368|26|CP023864|PILER-CR matches to KY979242 (Flavobacterium phage V182, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

32. spacer 1.2|5368|26|CP023864|PILER-CR matches to MK756084 (Flavobacterium phage FCOV-F6, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

33. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585273 (Flavobacterium phage FCOV-F1, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

34. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585298 (Flavobacterium phage FCOV-F34, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

35. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585286 (Flavobacterium phage FCOV-F20, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

36. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585296 (Flavobacterium phage FCOV-F32, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

37. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585314 (Flavobacterium phage V188, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

38. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585287 (Flavobacterium phage FCOV-F21, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

39. spacer 1.2|5368|26|CP023864|PILER-CR matches to KY992519 (Flavobacterium phage V175, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

40. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585299 (Flavobacterium phage FCOV-F35, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

41. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585279 (Flavobacterium phage FCOV-F11, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

42. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585295 (Flavobacterium phage FCOV-F31, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

43. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585304 (Flavobacterium phage FCOV-F41, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

44. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585288 (Flavobacterium phage FCOV-F22, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

45. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585309 (Flavobacterium phage FCOV-F48, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

46. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585293 (Flavobacterium phage FCOV-F29, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

47. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585291 (Flavobacterium phage FCOV-F26, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

48. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585302 (Flavobacterium phage FCOV-F39, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

49. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585284 (Flavobacterium phage FCOV-F18, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

50. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585305 (Flavobacterium phage FCOV-F42, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

51. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585290 (Flavobacterium phage FCOV-F24, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

52. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585311 (Flavobacterium phage V183, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

53. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585278 (Flavobacterium phage FCOV-F10, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

54. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585294 (Flavobacterium phage FCOV-F30, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

55. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585283 (Flavobacterium phage FCOV-F17, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

56. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585301 (Flavobacterium phage FCOV-F38, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

57. spacer 1.2|5368|26|CP023864|PILER-CR matches to KY979240 (Flavobacterium phage V157, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

58. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585303 (Flavobacterium phage FCOV-F40, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

59. spacer 1.2|5368|26|CP023864|PILER-CR matches to KY979241 (Flavobacterium phage V165, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

60. spacer 1.2|5368|26|CP023864|PILER-CR matches to MK756083 (Flavobacterium phage FCOV-F2, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

61. spacer 1.2|5368|26|CP023864|PILER-CR matches to MK756085 (Flavobacterium phage FCOV-F9, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

62. spacer 1.2|5368|26|CP023864|PILER-CR matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
taaaaaatatataaatatcagaattt	Protospacer
*  ****** ********** *****

63. spacer 1.2|5368|26|CP023864|PILER-CR matches to KY992520 (Flavobacterium phage V181, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

64. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585308 (Flavobacterium phage FCOV-F47, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

65. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585292 (Flavobacterium phage FCOV-F28, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

66. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585276 (Flavobacterium phage FCOV-F7, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

67. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585289 (Flavobacterium phage FCOV-F23, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

68. spacer 1.2|5368|26|CP023864|PILER-CR matches to MK756090 (Flavobacterium phage FCOV-F37, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

69. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585312 (Flavobacterium phage V184, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

70. spacer 1.2|5368|26|CP023864|PILER-CR matches to MT585307 (Flavobacterium phage FCOV-F44, complete genome) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataaaataaatgaatttcataattc	Protospacer
* **********.*** ********.

71. spacer 1.2|5368|26|CP023864|PILER-CR matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
ttaaaaatagctaaatatcataattt	Protospacer
*. ******. ***************

72. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tataacataaaaaaatatcataatta	Protospacer
* *** ***** *************

73. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 4, identity: 0.846

tctaaaataaataaatatcataattt	CRISPR spacer
tgaaaaataaattaatatcataaatt	Protospacer
*  ********* ********** **

74. spacer 2.1|191354|26|CP023864|CRT matches to NZ_LR594664 (Variovorax sp. RA8 plasmid 3) position: , mismatch: 4, identity: 0.846

tgctgttgacttacttttctattata	CRISPR spacer
tgctgtagacttacttttctactact	Protospacer
****** **************.**.

75. spacer 2.2|191398|26|CP023864|CRT matches to MH552500 (CrAssphage sp. isolate ctcc615, complete genome) position: , mismatch: 4, identity: 0.846

ttttatcgacttacttttctgttata	CRISPR spacer
tattatcgatttatttttctgttatg	Protospacer
* *******.***.***********.

76. spacer 2.3|191442|25|CP023864|CRT matches to NC_008367 (Phormidium phage Pf-WMP4, complete genome) position: , mismatch: 4, identity: 0.84

tttgtcgacttgctttcctgttata	CRISPR spacer
tttgtctacttgctttcctggtact	Protospacer
****** ************* **.

77. spacer 2.3|191442|25|CP023864|CRT matches to DQ875742 (Cyanophage Pf-WMP4, complete genome) position: , mismatch: 4, identity: 0.84

tttgtcgacttgctttcctgttata	CRISPR spacer
tttgtctacttgctttcctggtact	Protospacer
****** ************* **.

78. spacer 2.7|191617|26|CP023864|CRT matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 4, identity: 0.846

atttgtcagcttacttttctattata	CRISPR spacer
atttataagcttacttttctattcca	Protospacer
****.* **************** .*

79. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_CP009118 (Borreliella valaisiana Tom4006 plasmid cp26, complete sequence) position: , mismatch: 5, identity: 0.808

tctaaaataaataaatatcataattt	CRISPR spacer
tagaaaataaataaatatcctaataa	Protospacer
*  **************** ****

80. spacer 1.2|5368|26|CP023864|PILER-CR matches to NC_010010 (Bacillus megaterium QM B1551 plasmid pBM300, complete sequence) position: , mismatch: 5, identity: 0.808

tctaaaataaataaatatcataattt	CRISPR spacer
tcaacaataaataaatatcataacca	Protospacer
** * ******************..

81. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_CP022448 (Bacillus cereus C1L plasmid pC1L8, complete sequence) position: , mismatch: 5, identity: 0.808

tctaaaataaataaatatcataattt	CRISPR spacer
aattatataaataaatatcataatta	Protospacer
  * * *******************

82. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 5, identity: 0.808

tctaaaataaataaatatcataattt	CRISPR spacer
ataaaaatatataaatatcattattt	Protospacer
 . ****** *********** ****

83. spacer 1.2|5368|26|CP023864|PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 5, identity: 0.808

tctaaaataaataaatatcataattt	CRISPR spacer
actaaaataaataaacataataatgc	Protospacer
 **************.** ***** .

84. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 5, identity: 0.833

tctaaaataaataaatatcataatttcaac	CRISPR spacer
aataaaataaataaatattagaatttcatc	Protospacer
  ****************.* ******* *

85. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 5, identity: 0.833

tctaaaataaataaatatcataatttcaac	CRISPR spacer
aataaaataaataaatattagaatttcatc	Protospacer
  ****************.* ******* *

86. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 5, identity: 0.833

tctaaaataaataaatatcataatttcaac	CRISPR spacer
aataaaataaataaatattagaatttcatc	Protospacer
  ****************.* ******* *

87. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 5, identity: 0.833

tctaaaataaataaatatcataatttcaac	CRISPR spacer
aataaaataaataaatattagaatttcatc	Protospacer
  ****************.* ******* *

88. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 5, identity: 0.833

tctaaaataaataaatatcataatttcaac	CRISPR spacer
aataaaataaataaatattagaatttcatc	Protospacer
  ****************.* ******* *

89. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 5, identity: 0.833

tctaaaataaataaatatcataatttcaac	CRISPR spacer
aataaaataaataaatattagaatttcatc	Protospacer
  ****************.* ******* *

90. spacer 2.1|191354|26|CP023864|CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 5, identity: 0.808

tgctgttgacttacttttctattata	CRISPR spacer
aactgttgacttacttttcttttaat	Protospacer
 .****************** ***

91. spacer 2.5|191529|26|CP023864|CRT matches to MH431934 (Paenibacillus phage Gryphonian, complete genome) position: , mismatch: 5, identity: 0.808

ttttgtcgaattgctttcctgttata	CRISPR spacer
agatgtcgaattgctttccagtcata	Protospacer
   **************** **.***

92. spacer 2.5|191529|26|CP023864|CRT matches to MH454082 (Paenibacillus phage Genki, complete genome) position: , mismatch: 5, identity: 0.808

ttttgtcgaattgctttcctgttata	CRISPR spacer
agatgtcgaattgctttccagtcata	Protospacer
   **************** **.***

93. spacer 2.5|191529|26|CP023864|CRT matches to MH454077 (Paenibacillus phage Bloom, complete genome) position: , mismatch: 5, identity: 0.808

ttttgtcgaattgctttcctgttata	CRISPR spacer
agatgtcgaattgctttccagtcata	Protospacer
   **************** **.***

94. spacer 2.5|191529|26|CP023864|CRT matches to MH431933 (Paenibacillus phage DevRi, complete genome) position: , mismatch: 5, identity: 0.808

ttttgtcgaattgctttcctgttata	CRISPR spacer
agatgtcgaattgctttccagtcata	Protospacer
   **************** **.***

95. spacer 2.5|191529|26|CP023864|CRT matches to MH431932 (Paenibacillus phage Arcticfreeze, complete genome) position: , mismatch: 5, identity: 0.808

ttttgtcgaattgctttcctgttata	CRISPR spacer
agatgtcgaattgctttccagtcata	Protospacer
   **************** **.***

96. spacer 2.5|191529|26|CP023864|CRT matches to NC_048718 (Paenibacillus phage Jacopo, complete genome) position: , mismatch: 5, identity: 0.808

ttttgtcgaattgctttcctgttata	CRISPR spacer
agatgtcgaattgctttccagtcata	Protospacer
   **************** **.***

97. spacer 2.5|191529|26|CP023864|CRT matches to NC_048714 (Paenibacillus phage Yerffej, complete genome) position: , mismatch: 5, identity: 0.808

ttttgtcgaattgctttcctgttata	CRISPR spacer
agatgtcgaattgctttccagtcata	Protospacer
   **************** **.***

98. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_022051 (Listeria monocytogenes strain J1926 plasmid, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

99. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP041212 (Listeria monocytogenes strain LMP18-H2446 plasmid pCFSAN074383, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

100. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP020606 (Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03 plasmid pLd2, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

101. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to CP044431 (Listeria monocytogenes strain FDA00006667 plasmid pCFSAN038814, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

102. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP016704 (Lactococcus lactis subsp. lactis strain UL8 plasmid pUL8A, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

103. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_022045 (Listeria monocytogenes strain N1-011A plasmid, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

104. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_022046 (Listeria monocytogenes strain J1776 plasmid, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

105. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_022047 (Listeria monocytogenes strain J1817 plasmid, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

106. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP053631 (Listeria monocytogenes strain OB040119 plasmid pOB040119, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

107. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_010901 (Lactococcus lactis plasmid pNP40, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

108. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP043525 (Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_01, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

109. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP043526 (Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_02, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

110. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP053629 (Listeria monocytogenes strain OB030029 plasmid pOB030029, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

111. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP053633 (Listeria monocytogenes strain OB050226 plasmid pOB050226, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

112. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_015912 (Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pVF21, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

113. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP023514 (Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

114. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_004966 (Lactococcus lactis lactis bv. diacetylactis DPC220 plasmid pAH82, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

115. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to CP034583 (Lactococcus lactis subsp. lactis strain C10 plasmid pC10C, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

116. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP014254 (Listeria monocytogenes strain CFSAN023459 plasmid CFSAN023459_02, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

117. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_019350 (Lactococcus lactis subsp. cremoris plasmid pAF14, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

118. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_MH382833 (Listeria welshimeri strain 40/07 plasmid pLIS1, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

119. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP020834 (Listeria monocytogenes strain CFSAN004330 plasmid pCFSAN004330, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

120. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP022021 (Listeria monocytogenes strain FDA709873-33 plasmid pCFSAN021445, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

121. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to CP044433 (Listeria monocytogenes strain FDA00009448 plasmid pCFSAN038814, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

122. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP016721 (Lactococcus lactis subsp. lactis strain UC11 plasmid pUC11B, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

123. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP016726 (Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08A, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

124. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP016727 (Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08B, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

125. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_007191 (Lactococcus lactis cremoris 712 plasmid pAG6, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

126. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP016716 (Lactococcus lactis subsp. lactis strain UC063 plasmid pUC063B, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

127. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_015863 (Lactococcus lactis subsp. lactis plasmid pIL5, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

128. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_003383 (Listeria innocua Clip11262 plasmid pLI100, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

129. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_009435 (Lactococcus lactis NCDO 1867 plasmid pGdh442, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

130. spacer 23.29|1497244|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP033741 (Enterococcus sp. FDAARGOS_553 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.833

taagtcaaagtaacaaataaagagtaacga--	CRISPR spacer
gaagtcaaagtaacaa--aaaaagtaacggat	Protospacer
 ***************  ***.*******.

131. spacer 23.42|1498242|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_007765 (Rhizobium etli CFN 42 plasmid p42e, complete sequence) position: , mismatch: 5, identity: 0.833

tcttcgtcgtcgtcagctaactgttgtccc	CRISPR spacer
tcttcgtcgtcgtgagcgaactgttgttgg	Protospacer
************* *** *********.

132. spacer 23.42|1498242|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP006989 (Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence) position: , mismatch: 5, identity: 0.833

tcttcgtcgtcgtcagctaactgttgtccc	CRISPR spacer
tcttcgtcgtcgtgagcgaactgttgttgg	Protospacer
************* *** *********.

133. spacer 23.42|1498242|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP013554 (Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence) position: , mismatch: 5, identity: 0.833

tcttcgtcgtcgtcagctaactgttgtccc	CRISPR spacer
tcttcgtcgtcgtgagcgaactgttgttag	Protospacer
************* *** *********.

134. spacer 23.42|1498242|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP020909 (Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence) position: , mismatch: 5, identity: 0.833

tcttcgtcgtcgtcagctaactgttgtccc	CRISPR spacer
tcttcgtcgtcgtgagcgaactgttgttgg	Protospacer
************* *** *********.

135. spacer 23.42|1498242|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_021908 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence) position: , mismatch: 5, identity: 0.833

tcttcgtcgtcgtcagctaactgttgtccc	CRISPR spacer
tcttcgtcgtcgtgagcgaactgttgttgg	Protospacer
************* *** *********.

136. spacer 23.42|1498242|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP013565 (Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence) position: , mismatch: 5, identity: 0.833

tcttcgtcgtcgtcagctaactgttgtccc	CRISPR spacer
tcttcgtcgtcgtgagcgaactgttgttag	Protospacer
************* *** *********.

137. spacer 23.42|1498242|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP021126 (Rhizobium sp. Kim5 plasmid pRetKim5b, complete sequence) position: , mismatch: 5, identity: 0.833

tcttcgtcgtcgtcagctaactgttgtccc	CRISPR spacer
tcttcgtcgtcgtgagcgaactgttgttgg	Protospacer
************* *** *********.

138. spacer 23.42|1498242|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_010998 (Rhizobium etli CIAT 652 plasmid pA, complete sequence) position: , mismatch: 5, identity: 0.833

tcttcgtcgtcgtcagctaactgttgtccc	CRISPR spacer
tcttcgtcgtcgtaagcgaactgttgttgg	Protospacer
************* *** *********.

139. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 6, identity: 0.8

tctaaaataaataaatatcataatttcaac	CRISPR spacer
ttaataataaataaatttcataattttaaa	Protospacer
*. * *********** *********.**

140. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 6, identity: 0.8

tctaaaataaataaatatcataatttcaac	CRISPR spacer
ttaataataaataaatttcataattttaaa	Protospacer
*. * *********** *********.**

141. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NC_010010 (Bacillus megaterium QM B1551 plasmid pBM300, complete sequence) position: , mismatch: 6, identity: 0.8

tctaaaataaataaatatcataatttcaac--	CRISPR spacer
tcaacaataaataaatatcataa--ccagcta	Protospacer
** * ******************  .**.*

142. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 6, identity: 0.8

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataacataaaaaaatatcataattactat	Protospacer
* *** ***** ************* * *.

143. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_CP013043 (Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence) position: , mismatch: 6, identity: 0.8

tctaaaataaataaatatcataatttcaac----	CRISPR spacer
tctaatataaataaatatca----ttcaaataaa	Protospacer
***** **************    *****

144. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 6, identity: 0.8

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataacataaaaaaatatcataattactat	Protospacer
* *** ***** ************* * *.

145. spacer 2.1|191354|26|CP023864|CRT matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 6, identity: 0.769

tgctgttgacttacttttctattata	CRISPR spacer
aataattgactttcttttctattata	Protospacer
 .. .******* *************

146. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to KX853513 (Uncultured virus isolate Rctr41k, partial genome) position: , mismatch: 6, identity: 0.806

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
ggttgtagcccctcccccgacccctccccaa	Protospacer
* * * .************ ********* *

147. spacer 23.7|1495553|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP049202 (Escherichia coli strain PapRG-04-4 plasmid pIncFIB, complete sequence) position: , mismatch: 6, identity: 0.8

taatattgttactacattccagtctgttat	CRISPR spacer
taatatcgttactccattccagtcagcctt	Protospacer
******.****** ********** *.. *

148. spacer 23.7|1495553|30|CP023864|CRISPRCasFinder,PILER-CR matches to MN270258 (Streptococcus phage phi-SgaBSJ27_rum, complete genome) position: , mismatch: 6, identity: 0.8

taatattgttactacattccagtctgttat	CRISPR spacer
taatattcttactacattcaagtgaggttt	Protospacer
******* *********** ***  * * *

149. spacer 23.7|1495553|30|CP023864|CRISPRCasFinder,PILER-CR matches to MN270259 (Streptococcus phage phi-SgaBSJ31_rum, complete genome) position: , mismatch: 6, identity: 0.8

taatattgttactacattccagtctgttat	CRISPR spacer
taatattcttactacattcaagtgaggttt	Protospacer
******* *********** ***  * * *

150. spacer 23.13|1496014|30|CP023864|CRISPRCasFinder,PILER-CR matches to GQ981382 (Shigella phage SP18, complete genome) position: , mismatch: 6, identity: 0.8

tcgcatgtgcataaatggtatttactgtaa	CRISPR spacer
tagcatgtgtataaatggtatttttggaaa	Protospacer
* *******.************* . * **

151. spacer 23.13|1496014|30|CP023864|CRISPRCasFinder,PILER-CR matches to MK295203 (Escherichia phage vB_EcoM_005, complete genome) position: , mismatch: 6, identity: 0.8

tcgcatgtgcataaatggtatttactgtaa	CRISPR spacer
tagcatgtgtataaatggtatttttggaaa	Protospacer
* *******.************* . * **

152. spacer 23.13|1496014|30|CP023864|CRISPRCasFinder,PILER-CR matches to MT533174 (Escherichia phage CJ20, complete genome) position: , mismatch: 6, identity: 0.8

tcgcatgtgcataaatggtatttactgtaa	CRISPR spacer
tagcatgtgtataaatggtatttttggaaa	Protospacer
* *******.************* . * **

153. spacer 23.13|1496014|30|CP023864|CRISPRCasFinder,PILER-CR matches to KU878969 (Escherichia phage MX01, complete genome) position: , mismatch: 6, identity: 0.8

tcgcatgtgcataaatggtatttactgtaa	CRISPR spacer
tagcatgtgtataaatggtatttttggaaa	Protospacer
* *******.************* . * **

154. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP025427 (Enterococcus faecium strain SC4 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

155. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP041263 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R2) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

156. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP027511 (Enterococcus faecium strain AUSMDU00004055 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

157. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_LR135245 (Enterococcus faecium isolate E6988 plasmid 3) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

158. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_LR135256 (Enterococcus faecium isolate E7098 plasmid 3) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

159. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP038997 (Enterococcus faecium strain SRR24 plasmid pSRR24) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

160. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP019989 (Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

161. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_LR135490 (Enterococcus faecium isolate E8414 plasmid 3) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

162. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_LR135490 (Enterococcus faecium isolate E8414 plasmid 3) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

163. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP044266 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

164. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_LR134109 (Enterococcus faecium isolate E6043 plasmid 5) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

165. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP045014 (Enterococcus faecium strain LAC7.2 plasmid pII, complete sequence) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

166. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP040742 (Enterococcus faecium strain VRE1 plasmid pVRE1-VanA, complete sequence) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

167. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_AP022343 (Enterococcus faecium strain KUHS13 plasmid pELF2) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

168. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP041272 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S2) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

169. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP019994 (Enterococcus faecium isolate 2014-VREF-268 plasmid p268-2) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

170. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP035656 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed2) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

171. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP035662 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed2) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

172. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP019971 (Enterococcus faecium isolate 2014-VREF-114 plasmid p114-1 sequence) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

173. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP040238 (Enterococcus faecium strain VB3025 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

174. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP012462 (Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p2) position: , mismatch: 6, identity: 0.8

attctgaaagaagattagat-aaacaaccag	CRISPR spacer
attgtgaaagaaaattagataaaataaata-	Protospacer
*** ********.******* ***.** .*

175. spacer 23.37|1497859|29|CP023864|CRISPRCasFinder,PILER-CR matches to MN850609 (Escherichia phage dhaeg, complete genome) position: , mismatch: 6, identity: 0.793

actctggtgctaaagtagctgctaatagt	CRISPR spacer
gtcctggtgataaactagctgctaatatt	Protospacer
...****** **** ************ *

176. spacer 23.37|1497859|29|CP023864|CRISPRCasFinder,PILER-CR matches to NC_010105 (Enterobacteria phage JS98, complete genome) position: , mismatch: 6, identity: 0.793

actctggtgctaaagtagctgctaatagt	CRISPR spacer
gtcctggtgataaactagctgctaatatt	Protospacer
...****** **** ************ *

177. spacer 23.37|1497859|29|CP023864|CRISPRCasFinder,PILER-CR matches to MN850621 (Escherichia phage dhabil, complete genome) position: , mismatch: 6, identity: 0.793

actctggtgctaaagtagctgctaatagt	CRISPR spacer
gtcctggtgataaactagctgctaatatt	Protospacer
...****** **** ************ *

178. spacer 23.37|1497859|29|CP023864|CRISPRCasFinder,PILER-CR matches to MH791409 (UNVERIFIED: Escherichia phage EcWhh-1, complete genome) position: , mismatch: 6, identity: 0.793

actctggtgctaaagtagctgctaatagt	CRISPR spacer
gtcctggtgataaactagctgctaatatt	Protospacer
...****** **** ************ *

179. spacer 23.37|1497859|29|CP023864|CRISPRCasFinder,PILER-CR matches to KP007359 (Enterobacteria phage vB_EcoM_VR5, complete genome) position: , mismatch: 6, identity: 0.793

actctggtgctaaagtagctgctaatagt	CRISPR spacer
gtcctggtgataaactagctgctaatatt	Protospacer
...****** **** ************ *

180. spacer 23.37|1497859|29|CP023864|CRISPRCasFinder,PILER-CR matches to NC_012741 (Enterobacteria phage JS10, complete genome) position: , mismatch: 6, identity: 0.793

actctggtgctaaagtagctgctaatagt	CRISPR spacer
gtcctggtgataaactagctgctaatatt	Protospacer
...****** **** ************ *

181. spacer 23.37|1497859|29|CP023864|CRISPRCasFinder,PILER-CR matches to MK310184 (Phage NC-G, complete genome) position: , mismatch: 6, identity: 0.793

actctggtgctaaagtagctgctaatagt	CRISPR spacer
gtcctggtgataaactagctgctaatatt	Protospacer
...****** **** ************ *

182. spacer 23.37|1497859|29|CP023864|CRISPRCasFinder,PILER-CR matches to EU863409 (Enterobacteria phage JS10, complete sequence) position: , mismatch: 6, identity: 0.793

actctggtgctaaagtagctgctaatagt	CRISPR spacer
gtcctggtgataaactagctgctaatatt	Protospacer
...****** **** ************ *

183. spacer 23.37|1497859|29|CP023864|CRISPRCasFinder,PILER-CR matches to KT919973 (Vibrio phage phi-ST2, complete genome) position: , mismatch: 6, identity: 0.793

actctggtgctaaagtagctgctaatagt	CRISPR spacer
aaactggtgctaaagtagccgctagtgct	Protospacer
*  ****************.****.*. *

184. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NC_014634 (Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequence) position: , mismatch: 7, identity: 0.767

tctaaaataaataaatatcataatttcaac	CRISPR spacer
aataaaataaataaagttcataattttatt	Protospacer
  *************  *********.* .

185. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NC_015919 (Borreliella bissettii DN127 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.767

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tgaaggataaataaataaaataatttcaat	Protospacer
*  *..***********  **********.

186. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 7, identity: 0.767

tctaaaataaataaatatcataatttcaac	CRISPR spacer
taaaaaatatataaatatcagaatttttag	Protospacer
*  ****** ********** *****. *

187. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 7, identity: 0.767

tctaaaataaataaatatcataatttcaac	CRISPR spacer
ttaaaaatagctaaatatcataatttgatt	Protospacer
*. ******. *************** * .

188. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.767

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tgaaaaataaattaatatcataaattttaa	Protospacer
*  ********* ********** **. *

189. spacer 7.2|1036358|32|CP023864|PILER-CR matches to MN480762 (Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence) position: , mismatch: 7, identity: 0.781

tccattttcaagactatattctttc-ctcatac	CRISPR spacer
ttcaatttcaagaatatattctttcactcccg-	Protospacer
*.** ******** *********** *** ..

190. spacer 23.1|1495093|30|CP023864|CRISPRCasFinder matches to NZ_CP024309 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence) position: , mismatch: 7, identity: 0.767

atgtctggccgtcctctgccgaacgacatt	CRISPR spacer
acgaatggccggcctctgacgaacgacaac	Protospacer
*.*  ****** ****** ********* .

191. spacer 23.11|1495861|29|CP023864|CRISPRCasFinder,PILER-CR matches to GU323318 (Enterobacteria phage CC31, complete genome) position: , mismatch: 7, identity: 0.759

agcgatcttagtacattcaatcgcttcat	CRISPR spacer
aagttccttagcacattcaatagcttcat	Protospacer
*.   .*****.********* *******

192. spacer 23.11|1495861|29|CP023864|CRISPRCasFinder,PILER-CR matches to LT614807 (Cronobacter phage Pet-CM3-4 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.759

agcgatcttagtacattcaatcgcttcat	CRISPR spacer
aagttccttagcacattcaatagcttcat	Protospacer
*.   .*****.********* *******

193. spacer 23.20|1496552|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_002111 (Riemerella anatipestifer 10 plasmid pCFC1, complete sequence) position: , mismatch: 7, identity: 0.767

gcatactcagcctgtatgtttgatattgca	CRISPR spacer
gattactcagcttgtatgttagatattctt	Protospacer
*  ********.******** ****** .

194. spacer 23.26|1497014|30|CP023864|CRISPRCasFinder,PILER-CR matches to MN694374 (Marine virus AFVG_250M614, complete genome) position: , mismatch: 7, identity: 0.767

atggcttgtatgaagatgacttccatgcta	CRISPR spacer
gtaggttgtttgaagatcacttccatgcac	Protospacer
.*.* **** ******* **********

195. spacer 23.26|1497014|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_023007 (Bacillus phage vB_BanS-Tsamsa, complete genome) position: , mismatch: 7, identity: 0.767

atggcttgtatgaagatgacttccatgcta	CRISPR spacer
aagaaatgtatggagatgacttcaatgctt	Protospacer
* *.  ******.********** *****

196. spacer 23.26|1497014|30|CP023864|CRISPRCasFinder,PILER-CR matches to MN871444 (UNVERIFIED: Serratia phage KpGz_1, complete genome) position: , mismatch: 7, identity: 0.767

atggcttgtatgaagatgacttccatgcta	CRISPR spacer
gtcacttgtatgaagatgaattccaaactc	Protospacer
.* .*************** ***** .**

197. spacer 23.27|1497091|29|CP023864|CRISPRCasFinder,PILER-CR matches to NC_029065 (Pseudomonas phage VCM genome assembly VCM, chromosome : 1) position: , mismatch: 7, identity: 0.759

agtctatgactaagggtgagagtgttgta	CRISPR spacer
ggggcttgacaaagggtgagagtggtgta	Protospacer
.*  . **** ************* ****

198. spacer 23.30|1497321|30|CP023864|CRISPRCasFinder,PILER-CR matches to MN693029 (Marine virus AFVG_117M56, complete genome) position: , mismatch: 7, identity: 0.767

tacttttgcttgacatgaaaacaatagatt	CRISPR spacer
catgtttacttgacatgaaaacaaaaggtg	Protospacer
.*. ***.**************** **.*

199. spacer 23.30|1497321|30|CP023864|CRISPRCasFinder,PILER-CR matches to MN692985 (Marine virus AFVG_117M57, complete genome) position: , mismatch: 7, identity: 0.767

tacttttgcttgacatgaaaacaatagatt	CRISPR spacer
catgtttacttgacatgaaaacaaaaggtg	Protospacer
.*. ***.**************** **.*

200. spacer 23.31|1497398|30|CP023864|CRISPRCasFinder,PILER-CR matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 7, identity: 0.767

tcacgagaagaaacactaccatctgttaag	CRISPR spacer
taatcacaagaaacactgccatctgttatt	Protospacer
* *. * **********.**********

201. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to MN693972 (Marine virus AFVG_250M605, complete genome) position: , mismatch: 7, identity: 0.767

attctgaaagaagattagataaacaaccag	CRISPR spacer
attctgatagaagattagatgaactcttgg	Protospacer
******* ************.***  ...*

202. spacer 23.37|1497859|29|CP023864|CRISPRCasFinder,PILER-CR matches to NC_011251 (Borrelia duttonii Ly plasmid pl41, complete sequence) position: , mismatch: 7, identity: 0.759

actctggtgctaaagtagctgctaatagt	CRISPR spacer
gtgatgctgctaaattagctgctaataat	Protospacer
..  ** ******* ************.*

203. spacer 23.37|1497859|29|CP023864|CRISPRCasFinder,PILER-CR matches to NC_011257 (Borrelia duttonii Ly plasmid pl23, complete sequence) position: , mismatch: 7, identity: 0.759

actctggtgctaaagtagctgctaatagt	CRISPR spacer
gtgatgctgctaaattagctgctaataat	Protospacer
..  ** ******* ************.*

204. spacer 23.38|1497935|29|CP023864|CRISPRCasFinder,PILER-CR matches to NC_007762 (Rhizobium etli CFN 42 plasmid p42a, complete sequence) position: , mismatch: 7, identity: 0.759

ctgctgacgctcaagatgacttcatgagt	CRISPR spacer
ctgctgaagctcaagaggacttccctcga	Protospacer
******* ******** ****** .  *

205. spacer 23.39|1498011|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP039454 (Enterobacter bugandensis strain 220 plasmid pSurvcare220, complete sequence) position: , mismatch: 7, identity: 0.767

aacggcacaggtcaagcacttggttctcgt	CRISPR spacer
atccacacaggtcaggcacttgattctccg	Protospacer
* * .*********.*******.*****

206. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_CP009118 (Borreliella valaisiana Tom4006 plasmid cp26, complete sequence) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tagaaaataaataaatatcctaataaaagt	Protospacer
*  **************** ****   *..

207. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to KY979239 (Flavobacterium phage V156, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

208. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585306 (Flavobacterium phage FCOV-F43, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

209. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585275 (Flavobacterium phage FCOV-F4, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

210. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585280 (Flavobacterium phage FCOV-F12, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

211. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MK756088 (Flavobacterium phage FCOV-F25, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

212. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585285 (Flavobacterium phage FCOV-F19, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

213. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MK756089 (Flavobacterium phage FCOV-F27, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

214. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585297 (Flavobacterium phage FCOV-F33, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

215. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585274 (Flavobacterium phage FCOV-F3, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

216. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585315 (Flavobacterium phage V189, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

217. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585277 (Flavobacterium phage FCOV-F8, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

218. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585300 (Flavobacterium phage FCOV-F36, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

219. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to KY979242 (Flavobacterium phage V182, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

220. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MK756084 (Flavobacterium phage FCOV-F6, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

221. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585273 (Flavobacterium phage FCOV-F1, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

222. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585298 (Flavobacterium phage FCOV-F34, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

223. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585286 (Flavobacterium phage FCOV-F20, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

224. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585296 (Flavobacterium phage FCOV-F32, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

225. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585314 (Flavobacterium phage V188, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

226. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585287 (Flavobacterium phage FCOV-F21, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

227. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to KY992519 (Flavobacterium phage V175, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

228. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585299 (Flavobacterium phage FCOV-F35, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

229. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585279 (Flavobacterium phage FCOV-F11, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

230. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585295 (Flavobacterium phage FCOV-F31, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

231. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585304 (Flavobacterium phage FCOV-F41, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

232. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585288 (Flavobacterium phage FCOV-F22, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

233. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585309 (Flavobacterium phage FCOV-F48, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

234. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585293 (Flavobacterium phage FCOV-F29, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

235. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585291 (Flavobacterium phage FCOV-F26, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

236. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585302 (Flavobacterium phage FCOV-F39, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

237. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585284 (Flavobacterium phage FCOV-F18, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

238. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585305 (Flavobacterium phage FCOV-F42, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

239. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585290 (Flavobacterium phage FCOV-F24, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

240. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585311 (Flavobacterium phage V183, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

241. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585278 (Flavobacterium phage FCOV-F10, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

242. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585294 (Flavobacterium phage FCOV-F30, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

243. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585283 (Flavobacterium phage FCOV-F17, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

244. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585301 (Flavobacterium phage FCOV-F38, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

245. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to KY979240 (Flavobacterium phage V157, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

246. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585303 (Flavobacterium phage FCOV-F40, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

247. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to KY979241 (Flavobacterium phage V165, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

248. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MK756083 (Flavobacterium phage FCOV-F2, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

249. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MK756085 (Flavobacterium phage FCOV-F9, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

250. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to KY992520 (Flavobacterium phage V181, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

251. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585308 (Flavobacterium phage FCOV-F47, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

252. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585292 (Flavobacterium phage FCOV-F28, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

253. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585276 (Flavobacterium phage FCOV-F7, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

254. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585289 (Flavobacterium phage FCOV-F23, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

255. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MK756090 (Flavobacterium phage FCOV-F37, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

256. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585312 (Flavobacterium phage V184, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

257. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MT585307 (Flavobacterium phage FCOV-F44, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tataaaataaatgaatttcataattctgtt	Protospacer
* **********.*** ********... .

258. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to MN693301 (Marine virus AFVG_25M27, complete genome) position: , mismatch: 8, identity: 0.733

tctaaaataaataaatatcataatttcaac	CRISPR spacer
tccgtctgaaataaatatcataatttgaag	Protospacer
**..    ****************** **

259. spacer 5.11|971699|37|CP023864|CRT matches to NZ_CP026928 (Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence) position: , mismatch: 8, identity: 0.784

ggcaat-tctcgacagtgctttcgcagattgtagtgag	CRISPR spacer
-gcgctgtctcgacagtcccttcgcagattgtacgggg	Protospacer
 **. * ********** *.*************  *.*

260. spacer 7.2|1036358|32|CP023864|PILER-CR matches to MK448740 (Streptococcus phage Javan367, complete genome) position: , mismatch: 8, identity: 0.75

tccattttcaagactatattctttcctcatac	CRISPR spacer
accattttcaagtctatattgttttatctttt	Protospacer
 *********** ******* ***. ** * .

261. spacer 7.2|1036358|32|CP023864|PILER-CR matches to NC_010945 (Streptococcus phage PH15, complete genome) position: , mismatch: 8, identity: 0.75

tccattttcaagactatattctttcctcatac	CRISPR spacer
accattttcaagtctatattgttttatctttt	Protospacer
 *********** ******* ***. ** * .

262. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to NZ_CP016313 (Thermus brockianus strain GE-1 plasmid pTB1, complete sequence) position: , mismatch: 8, identity: 0.742

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
atggcgagcaccgcccccgtcccctccccca	Protospacer
.* . ..** ** ******************

263. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to MH729818 (Escherichia phage LL11, complete genome) position: , mismatch: 8, identity: 0.742

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
agcccacgcccctccccccccccctccccca	Protospacer
. .  * *********** .***********

264. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 8, identity: 0.742

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
ggcccggccccctccccctccccctccccca	Protospacer
* .  .* ********** .***********

265. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 8, identity: 0.742

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
gtcccctgcccctgccccgtcccctgccccg	Protospacer
**.    ****** *********** ****.

266. spacer 21.1|1419460|30|CP023864|CRISPRCasFinder matches to NC_049978 (IAS virus, complete genome) position: , mismatch: 8, identity: 0.733

tgaatataaaggactttcttgtgttatttc	CRISPR spacer
tgaatataaaggacattctagtggatatag	Protospacer
************** **** ***    *

267. spacer 23.1|1495093|30|CP023864|CRISPRCasFinder matches to NC_023282 (Streptomyces sp. FR1 plasmid pFRL2, complete sequence) position: , mismatch: 8, identity: 0.733

atgtctggccgtcctctgccgaacgacatt	CRISPR spacer
tcgtctggccgtcctccgccgaacgcttgg	Protospacer
 .**************.******** .

268. spacer 23.1|1495093|30|CP023864|CRISPRCasFinder matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 8, identity: 0.733

atgtctggccgtcctctgccgaacgacatt	CRISPR spacer
ccgtctggccggcctctgccgaaaggcgaa	Protospacer
 .********* *********** *.*.

269. spacer 23.1|1495093|30|CP023864|CRISPRCasFinder matches to NZ_CP032328 (Azospirillum brasilense strain MTCC4035 plasmid p7, complete sequence) position: , mismatch: 8, identity: 0.733

atgtctggccgtcctctgccgaacgacatt	CRISPR spacer
gacaccggccgtccgctgccgtacgacatg	Protospacer
.   *.******** ****** *******

270. spacer 23.11|1495861|29|CP023864|CRISPRCasFinder,PILER-CR matches to MN617835 (Enterobacter phage prasa_myo, complete genome) position: , mismatch: 8, identity: 0.724

agcgatcttagtacattcaatcgcttcat	CRISPR spacer
gagttccttagcacattcaatagcttcat	Protospacer
..   .*****.********* *******

271. spacer 23.11|1495861|29|CP023864|CRISPRCasFinder,PILER-CR matches to MG999954 (Enterobacter phage myPSH1140, complete genome) position: , mismatch: 8, identity: 0.724

agcgatcttagtacattcaatcgcttcat	CRISPR spacer
gagttccttagcacattcaatagcttcat	Protospacer
..   .*****.********* *******

272. spacer 23.12|1495937|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_049963 (Bacillus phage Juan, complete genome) position: , mismatch: 8, identity: 0.733

ctaaaaaacattccttatttgttatatcta	CRISPR spacer
aataaaaacattctttatttgttaaactca	Protospacer
   **********.********** *...*

273. spacer 23.12|1495937|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_031121 (Bacillus phage Aurora, complete genome) position: , mismatch: 8, identity: 0.733

ctaaaaaacattccttatttgttatatcta	CRISPR spacer
aataaaaacattctttatttgttaaactca	Protospacer
   **********.********** *...*

274. spacer 23.12|1495937|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 8, identity: 0.733

ctaaaaaacattccttatttgttatatcta	CRISPR spacer
tttggaaacatttcttattttttatatcat	Protospacer
.* ..*******.******* *******

275. spacer 23.26|1497014|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_LT960615 (Hartmannibacter diazotrophicus strain E19T plasmid HDIAp1, complete sequence) position: , mismatch: 8, identity: 0.733

atggcttgtatgaagatgacttccatgcta	CRISPR spacer
acaactcgtattaagatgacttccatgtct	Protospacer
*...**.**** ***************..

276. spacer 23.28|1497167|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 8, identity: 0.733

ttgccaagattggcggattgataattgacg	CRISPR spacer
aggtggatcttggcggattgataatagacg	Protospacer
  *. .*  **************** ****

277. spacer 23.28|1497167|30|CP023864|CRISPRCasFinder,PILER-CR matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 8, identity: 0.733

ttgccaagattggcggattgataattgacg	CRISPR spacer
aggtggatcttggcggattgataatagacg	Protospacer
  *. .*  **************** ****

278. spacer 23.28|1497167|30|CP023864|CRISPRCasFinder,PILER-CR matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 8, identity: 0.733

ttgccaagattggcggattgataattgacg	CRISPR spacer
aggtggatcttggcggattgataatagacg	Protospacer
  *. .*  **************** ****

279. spacer 23.32|1497475|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP025015 (Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence) position: , mismatch: 8, identity: 0.733

tcgatagaagtgagagttttaagagtagag	CRISPR spacer
ccgacagaagtgagagtgttaagaagccat	Protospacer
.***.************ ******.   *

280. spacer 23.42|1498242|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.733

tcttcgtcgtcgtcagctaactgttgtccc	CRISPR spacer
gcttcgtcgtcgtcagcgaactcgcctggc	Protospacer
 **************** ****  . *  *

281. spacer 23.42|1498242|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 8, identity: 0.733

tcttcgtcgtcgtcagctaactgttgtccc	CRISPR spacer
gcttcgtcgtcgtcagcgaactcgcctggc	Protospacer
 **************** ****  . *  *

282. spacer 1.3|5335|30|CP023864|CRISPRCasFinder matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 9, identity: 0.7

tctaaaataaataaatatcataatttcaac	CRISPR spacer
actaaaataaataaacataataatgcattt	Protospacer
 **************.** ***** .   .

283. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to NZ_CP013577 (Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence) position: , mismatch: 9, identity: 0.71

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
gccgacggcccctcgcccgacccctccccgt	Protospacer
*.... ******** **** *********

284. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to NZ_CP013549 (Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence) position: , mismatch: 9, identity: 0.71

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
gccgacggcccctcgcccgacccctccccgt	Protospacer
*.... ******** **** *********

285. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to NC_023284 (Streptomyces sp. F2 plasmid pFRL4, complete sequence) position: , mismatch: 9, identity: 0.71

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
agcaccagcccctcccccgtcccttccaccg	Protospacer
. .*  .****************.*** **.

286. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to NZ_CP013534 (Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence) position: , mismatch: 9, identity: 0.71

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
gccgacggcccctcgcccgacccctccccgt	Protospacer
*.... ******** **** *********

287. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to NZ_CP013545 (Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence) position: , mismatch: 9, identity: 0.71

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
gccgacggcccctcgcccgacccctccccgt	Protospacer
*.... ******** **** *********

288. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to NZ_CP013571 (Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence) position: , mismatch: 9, identity: 0.71

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
gccgacggcccctcgcccgacccctccccgt	Protospacer
*.... ******** **** *********

289. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to NZ_CP044073 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.71

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
ctcccctccccctccccctccccctccccca	Protospacer
 *.     ********** .***********

290. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 9, identity: 0.71

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
cgtccctgcccctgccccgtcccctgcccct	Protospacer
  *    ****** *********** ****

291. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 9, identity: 0.71

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
gcacgagccccctcccccctcccctccaatg	Protospacer
*.  *** ********** ********  ..

292. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to MN693707 (Marine virus AFVG_250M784, complete genome) position: , mismatch: 9, identity: 0.71

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
taagaaagcccctccccctccccctcccccc	Protospacer
   ..*.*********** .**********

293. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to MN693707 (Marine virus AFVG_250M784, complete genome) position: , mismatch: 9, identity: 0.71

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
taagaaagcccctccccctccccctcccccc	Protospacer
   ..*.*********** .**********

294. spacer 18.1|1347689|31|CP023864|CRISPRCasFinder matches to MK249228 (Blackfly microvirus SF02 isolate 190, complete genome) position: , mismatch: 9, identity: 0.71

gttagaggcccctcccccgtcccctccccca	CRISPR spacer
ctcttttccccctgccccttcccctccccca	Protospacer
 *.     ***** **** ************

295. spacer 23.3|1495247|30|CP023864|CRISPRCasFinder matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 9, identity: 0.7

ttacatcttcctcggtggtgttatcagtcc	CRISPR spacer
cgacatcttcctcggtggtgctgtcgaaag	Protospacer
. ******************.*.**..

296. spacer 23.12|1495937|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP034112 (Staphylococcus epidermidis strain CDC120 plasmid pSTA491, complete sequence) position: , mismatch: 9, identity: 0.7

ctaaaaaacattccttatttgttatatcta	CRISPR spacer
gataaaaacatttcttatttgttttaatgc	Protospacer
   *********.********** ** .

297. spacer 23.16|1496245|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP047900 (Pseudarthrobacter sp. YJ56 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

agaggtactggtcaagctctcggctctcgt	CRISPR spacer
gagggtacaggtcaagctctcggccaactc	Protospacer
...***** ***************.  * .

298. spacer 23.28|1497167|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_017209 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT14, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccaagattggcggattgataattgacg	CRISPR spacer
gcttaaagattggcggtttgataaatgaat	Protospacer
 . . *********** ******* ***

299. spacer 23.28|1497167|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP004883 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB14, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccaagattggcggattgataattgacg	CRISPR spacer
gcttaaagattggcggtttgataaatgaat	Protospacer
 . . *********** ******* ***

300. spacer 23.28|1497167|30|CP023864|CRISPRCasFinder,PILER-CR matches to NZ_CP015151 (Bacillus thuringiensis strain Bc601 plasmid pBTBC1, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccaagattggcggattgataattgacg	CRISPR spacer
gcttaaagattggcggtttgataaatgaat	Protospacer
 . . *********** ******* ***

301. spacer 23.28|1497167|30|CP023864|CRISPRCasFinder,PILER-CR matches to CP020760 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-21, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccaagattggcggattgataattgacg	CRISPR spacer
gcttaaagattggcggtttgataaatgaat	Protospacer
 . . *********** ******* ***

302. spacer 23.28|1497167|30|CP023864|CRISPRCasFinder,PILER-CR matches to NC_005567 (Bacillus thuringiensis H1.1 plasmid pGI3, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccaagattggcggattgataattgacg	CRISPR spacer
gcttaaagattggcggtttgataaatgaat	Protospacer
 . . *********** ******* ***

303. spacer 23.36|1497782|30|CP023864|CRISPRCasFinder,PILER-CR matches to AB823818 (Phage phi OH2 DNA, complete genome) position: , mismatch: 9, identity: 0.7

attctgaaagaagattagataaacaaccag	CRISPR spacer
gagttgaaagaagattagataataaacata	Protospacer
.  .******************  ***  .

304. spacer 23.39|1498011|30|CP023864|CRISPRCasFinder,PILER-CR matches to MG251388 (Pseudomonas phage Psp6, complete genome) position: , mismatch: 9, identity: 0.7

aacggcacaggtcaagcacttggttctcgt	CRISPR spacer
gctggcacaggtcaaacacttggtcgaact	Protospacer
. .************.********.    *

305. spacer 11.1|1103343|33|CP023864|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.697

gtagacggtgctgagtgggttcgtggacgaaac	CRISPR spacer
cgcgcgggtgctgagtgggtccgaggacgaccg	Protospacer
   *  **************.** ******

306. spacer 23.16|1496245|30|CP023864|CRISPRCasFinder,PILER-CR matches to AP014720 (Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8) position: , mismatch: 10, identity: 0.667

agaggtactggtcaagctctcggctctcgt	CRISPR spacer
gagggtacaggtcaagctctcggccaattc	Protospacer
...***** ***************.  . .

307. spacer 23.31|1497398|30|CP023864|CRISPRCasFinder,PILER-CR matches to AP019525 (Tenacibaculum phage PTm5 DNA, complete genome) position: , mismatch: 10, identity: 0.667

tcacgagaagaaacactaccatctgttaag	CRISPR spacer
aagtaagaagaaacactatcatctgtactt	Protospacer
  ...*************.*******

308. spacer 23.31|1497398|30|CP023864|CRISPRCasFinder,PILER-CR matches to AP019524 (Tenacibaculum phage PTm1 DNA, complete genome) position: , mismatch: 10, identity: 0.667

tcacgagaagaaacactaccatctgttaag	CRISPR spacer
aagtaagaagaaacactatcatctgtactt	Protospacer
  ...*************.*******

309. spacer 5.19|972251|37|CP023864|CRT matches to KX557278 (Gordonia phage Ghobes, complete genome) position: , mismatch: 11, identity: 0.703

aacaattggagggcttgctttcagcaattgtagctct	CRISPR spacer
aacaactggagggcttgctttgagcaccagtcttcgc	Protospacer
*****.*************** **** . **  .. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1141676 : 1204739

Staphylococcus_phage(20.0%)

integrase,transposase

attL 1138706:1138726|attR 1201375:1201395

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1138706:1138726	attL	NA	NA	NA	NA
AUI56263.1\|1141676_1142624_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.8e-33	34.1
AUI56264.1\|1142929_1143595_-	hypothetical protein	NA	NA	NA	NA
AUI56265.1\|1144823_1145039_-	hypothetical protein	NA	NA	NA	NA
AUI56266.1\|1146331_1146586_-	hypothetical protein	NA	NA	NA	NA
AUI56267.1\|1148858_1149041_+	hypothetical protein	NA	NA	NA	NA
AUI56268.1\|1149689_1150058_+	SMI1/KNR4 family protein	NA	NA	NA	NA
AUI56269.1\|1150451_1150802_+	cyclopropane-fatty-acyl-phospholipid synthase	NA	NA	NA	NA
AUI56270.1\|1151913_1152540_-	hypothetical protein	NA	NA	NA	NA
AUI56271.1\|1152644_1153253_-	hypothetical protein	NA	NA	NA	NA
AUI56272.1\|1154688_1154940_-	hypothetical protein	NA	NA	NA	NA
AUI56273.1\|1155393_1155597_-	hypothetical protein	NA	NA	NA	NA
AUI56274.1\|1156150_1156336_-	hypothetical protein	NA	NA	NA	NA
AUI56275.1\|1157926_1158613_+	hypothetical protein	NA	NA	NA	NA
AUI56276.1\|1159204_1159867_+	ParA family protein	NA	NA	NA	NA
AUI56717.1\|1160188_1160800_+	hypothetical protein	NA	NA	NA	NA
AUI56718.1\|1161142_1162384_+\|transposase	transposase	NA	NA	NA	NA
AUI56277.1\|1162424_1162877_-	hypothetical protein	NA	NA	NA	NA
AUI56278.1\|1163036_1163603_-	hypothetical protein	NA	NA	NA	NA
AUI56279.1\|1164398_1164872_-	hypothetical protein	NA	NA	NA	NA
AUI56280.1\|1165289_1165940_+	hypothetical protein	NA	NA	NA	NA
AUI56281.1\|1167134_1167605_+	DUF4065 domain-containing protein	I6R0L8	Salmonella_phage	3.4e-09	31.9
AUI56282.1\|1167629_1168472_+	hypothetical protein	NA	NA	NA	NA
AUI56283.1\|1170874_1171942_-	mobilization protein	NA	NA	NA	NA
AUI56284.1\|1171925_1172357_-	hypothetical protein	NA	NA	NA	NA
AUI56285.1\|1172684_1173164_-	DUF3408 domain-containing protein	NA	NA	NA	NA
AUI56286.1\|1173927_1174527_+	hypothetical protein	NA	NA	NA	NA
AUI56287.1\|1174794_1175613_+	hypothetical protein	NA	NA	NA	NA
AUI56288.1\|1175627_1176740_+	hypothetical protein	A0A1V0SAC2	Catovirus	6.2e-09	24.5
AUI56289.1\|1176742_1178983_+	hypothetical protein	NA	NA	NA	NA
AUI56290.1\|1178969_1180022_+	DUF1848 domain-containing protein	NA	NA	NA	NA
AUI56291.1\|1180100_1180685_+	hypothetical protein	NA	NA	NA	NA
AUI56292.1\|1180681_1181659_+	DUF4868 domain-containing protein	NA	NA	NA	NA
AUI56293.1\|1181743_1183429_+	AAA family ATPase	NA	NA	NA	NA
AUI56294.1\|1183709_1183997_+	XRE family transcriptional regulator	NA	NA	NA	NA
AUI56295.1\|1188037_1189300_-\|integrase	integrase	NA	NA	NA	NA
AUI56296.1\|1189362_1190592_-\|integrase	integrase	H7BUI8	unidentified_phage	3.6e-26	34.6
AUI56297.1\|1191285_1192554_+	hypothetical protein	A0A2I7RNF1	Vibrio_phage	1.3e-10	31.1
AUI56298.1\|1192550_1193234_+	hypothetical protein	NA	NA	NA	NA
AUI56299.1\|1193747_1197044_+	TonB-dependent receptor	NA	NA	NA	NA
AUI56300.1\|1197064_1198873_+	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA
AUI56301.1\|1200234_1200444_+	hypothetical protein	NA	NA	NA	NA
AUI56302.1\|1200490_1202002_+	hypothetical protein	NA	NA	NA	NA
1201375:1201395	attR	NA	NA	NA	NA
AUI56303.1\|1203039_1203270_+	hypothetical protein	NA	NA	NA	NA
AUI56304.1\|1203409_1203754_+\|transposase	transposase family protein	NA	NA	NA	NA
AUI56305.1\|1203869_1204739_+\|transposase	DDE transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: CP023864.1|AUI56264.1|1142929_1143595_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: CP023864.1|AUI56265.1|1144823_1145039_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: CP023864.1|AUI56266.1|1146331_1146586_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP023864.1|AUI56264.1|1142929_1143595_-|hypothetical-protein

1142929_1143595_-

221 aa aa

1141676-1204739

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP023864_14	Orphan	14.1\|1154683\|44\|CP023864\|CRISPRCasFinder	1154683-1154726	44	1151787-1151830	2

1. spacer 14.1|1154683|44|CP023864|CRISPRCasFinder matches to CP023864 position: 1151787-1151830, mismatch: 2

tcttcctcacatgggtatctcggtgatcactccccttccctccg	CRISPR spacer
tcttcctcacatgggtatttcggtgatcactccccttcccttcg	Protospacer
******************.**********************.**

CP023864.1|AUI56265.1|1144823_1145039_-|hypothetical-protein

1144823_1145039_-

71 aa aa

1141676-1204739

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP023864_14	Orphan	14.1\|1154683\|44\|CP023864\|CRISPRCasFinder	1154683-1154726	44	1151787-1151830	2

1. spacer 14.1|1154683|44|CP023864|CRISPRCasFinder matches to CP023864 position: 1151787-1151830, mismatch: 2

tcttcctcacatgggtatctcggtgatcactccccttccctccg	CRISPR spacer
tcttcctcacatgggtatttcggtgatcactccccttcccttcg	Protospacer
******************.**********************.**

CP023864.1|AUI56266.1|1146331_1146586_-|hypothetical-protein

1146331_1146586_-

84 aa aa

1141676-1204739

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP023864_14	Orphan	14.1\|1154683\|44\|CP023864\|CRISPRCasFinder	1154683-1154726	44	1151787-1151830	2

1. spacer 14.1|1154683|44|CP023864|CRISPRCasFinder matches to CP023864 position: 1151787-1151830, mismatch: 2

tcttcctcacatgggtatctcggtgatcactccccttccctccg	CRISPR spacer
tcttcctcacatgggtatttcggtgatcactccccttcccttcg	Protospacer
******************.**********************.**

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP023863

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection