CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP016327	Candidatus Portiera aleyrodidarum strain BT-Z1 chromosome, complete genome	8 crisprs	NA	0	0	0	0

Cas Category Instructions

Results visualization

1. CP016327

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CRISPR-Cas detection and classification

Crispr_ID: CP016327_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP016327_1

135441-135556

Orphan

Consensus_repeat	Method
CTAACAAATAAGCTCTAATAGATAAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP016327_1

>merge|CP016327|1|135441-135556|CRISPRCasFinder
TTAACAACAAACCTCTAATAATAAATAATACAAGCAAACATTTAAACAATTAAAACTCTAACATCAAAACAAGCTAACCGCTAAACAACTAACAACTAACCGCTAACCGCTAACCG

>CP016327|1|1|135441-135556|CRISPRCasFinder
TTAACAACAAACCTCTAATAATAAATAA	TACAAGCAAACATTTAAACAATTAAAACTCTAACATCAAAACAAGCTAACCGCTAAACAA
CTAACAACTAACCGCTAACCGCTAACCG

Protein	Signature genes	Signature genes Name	Protein_function
CP016327.1\|AUI73001.1\|117534_120381_+\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
CP016327.1\|AUI73003.1\|121922_123413_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
CP016327.1\|AUI73009.1\|137823_140472_+\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499
CP016327.1\|AUI73151.1\|145544_145976_+\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
CP016327.1\|AUI73010.1\|140640_141717_+\|2-oxoglutarate-dehydrogenase	unknown	unknown	gnl\|CDD\|235571
CP016327.1\|AUI73006.1\|124907_125123_+\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
CP016327.1\|AUI73002.1\|121028_121922_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
CP016327.1\|AUI73011.1\|141737_143156_+\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235779
CP016327.1\|AUI73000.1\|117279_117519_+\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
CP016327.1\|AUI73013.1\|145972_147331_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
CP016327.1\|AUI73015.1\|149145_149361_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
CP016327.1\|AUI73014.1\|148082_149105_-\|tRNA-N6-adenosine(37)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
CP016327.1\|AUI73005.1\|124051_124894_+\|RNA-polymerase-factor-sigma-32	unknown	unknown	gnl\|CDD\|235838
CP016327.1\|AUI73012.1\|145299_145539_+\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
CP016327.1\|AUI72999.1\|116303_117287_+\|Obg-family-GTPase-CgtA	unknown	unknown	gnl\|CDD\|237047
CP016327.1\|AUI73152.1\|144989_145277_+\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
CP016327.1\|AUI73007.1\|125139_125289_+\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|179075
CP016327.1\|AUI73008.1\|136359_137793_+\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
CP016327.1\|AUI73004.1\|123567_123912_+\|hypothetical-protein	unknown	unknown	unknown
CP016327.1\|AUI72998.1\|116049_116316_+\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464

Protein	Function_ID	Function_description	E-value
CP016327.1\|AUI73001.1\|117534_120381_+\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
CP016327.1\|AUI73003.1\|121922_123413_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
CP016327.1\|AUI73009.1\|137823_140472_+\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
CP016327.1\|AUI73151.1\|145544_145976_+\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	9.4583e-24
CP016327.1\|AUI73010.1\|140640_141717_+\|2-oxoglutarate-dehydrogenase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	1.95907e-152
CP016327.1\|AUI73006.1\|124907_125123_+\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	8.79919e-28
CP016327.1\|AUI73002.1\|121028_121922_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	7.72606e-149
CP016327.1\|AUI73011.1\|141737_143156_+\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235779	PRK06327, PRK06327, dihydrolipoamide dehydrogenase; Validated.	0
CP016327.1\|AUI73000.1\|117279_117519_+\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	2.90151e-12
CP016327.1\|AUI73013.1\|145972_147331_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
CP016327.1\|AUI73015.1\|149145_149361_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	4.80306e-14
CP016327.1\|AUI73014.1\|148082_149105_-\|tRNA-N6-adenosine(37)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	1.58556e-128
CP016327.1\|AUI73005.1\|124051_124894_+\|RNA-polymerase-factor-sigma-32	gnl\|CDD\|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	4.11023e-151
CP016327.1\|AUI72999.1\|116303_117287_+\|Obg-family-GTPase-CgtA	gnl\|CDD\|237047	PRK12298, obgE, GTPase CgtA; Reviewed.	3.1344e-106
CP016327.1\|AUI73152.1\|144989_145277_+\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	1.37071e-15
CP016327.1\|AUI73007.1\|125139_125289_+\|50S-ribosomal-protein-L33	gnl\|CDD\|179075	PRK00595, rpmG, 50S ribosomal protein L33; Validated.	5.78612e-11
CP016327.1\|AUI73008.1\|136359_137793_+\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
CP016327.1\|AUI73012.1\|145299_145539_+\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	2.69052e-30
CP016327.1\|AUI72998.1\|116049_116316_+\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	7.28261e-42

>CP016327.1|AUI73007.1|125139_125289_+|50S-ribosomal-protein-L33
MRKKIKLVSTKGTGHCYSTYKNKRENKKKLNLKKYDPIIRRHVNYRESK
>CP016327.1|AUI73006.1|124907_125123_+|50S-ribosomal-protein-L28
MTKRCQITYKKPMQGNNVSHSHRKTRRRFMPNLQKHRFWINKEKRYIKMHITTKGMRIIDKYGIEKVLIKT
>CP016327.1|AUI73005.1|124051_124894_+|RNA-polymerase-factor-sigma-32
MIQNYPETNIEGYIKTVLGFPIISAQDEYDLARRLRNKGDLDAARCLVISNLRFVIHIARSYSGYGLQNSDIIQEGNVGLMKAVKRFDPAHGVRLVSFAIHWIKAEIHEYVLRNWRIVKIATTKSQRKLFFSLRCAKTSLNWLNREEIKSIAKDLNVKPTVVREMECRLSSTDYGFDNKQKEEKNNYKNPSNYLEDSRFDPALQFENLDFERYSYRRLYVALNKLDERVRDILKQRWLNEQKATLHELADIYGVSAERIRQLEQRAIKKIKNYINISTYI
>CP016327.1|AUI73004.1|123567_123912_+|hypothetical-protein
MLGYAKPLQKGGSRKIISKELEATLLMCFIELVFIILTDLQNLSFFLLRYKFLTKDLLVSRNNTYFAPLDIASKPSEPLPAYKSKIVLFVISFFIKSKKISRTLINVGLTHLPP
>CP016327.1|AUI73003.1|121922_123413_+|lysine--tRNA-ligase
MIIKNYLIKDRLNKLQVLSKTANKAGKSAFYNKFRRTSLAKSLKKIFGEKNKKQLVNLKLTTAVAGRIMRKRGPFIVVQDVSSNIQLYIDKKTISNEIHKDIKDWDIGDIIGAIGDIDKSKIGELYLFVKKAYILTKSIRHLPSKFHGIKDQEIRYRHRYLDFIMNKEVRKTFKIRTRIISALRKFFYELYFLEAETPILHSMPGGAIAKPFETYNYSLNIKLYLRIAPELYLKRLVVGGFERVFEINKNFRNEGISTWHNPEFTMLEFYWAFATYKDLMEITEHMIRFVANEALGTTSIYIGNILNIDLSEPFDCLSMRDSLIKYGKTFSINNSDFYDLENLLFLSKRIGLTVANYNNYGNLLNKLFEVIVERKLIKPTFVTDYPVEVSPLARSKDSNLNITERFELFIGGREIANGFSELNDYIEQSNRFYLQLRNKYTYDLSYFDMDYIRALEYGMPPTAGEGVGIDRLVMILTNKDSIRDVLLFPLLRSRKV
>CP016327.1|AUI73002.1|121028_121922_+|peptide-chain-release-factor-2
MKTVENGIYNNAELLHLAITELDSKPLSFIKQDIIFFEKELAKLDAVRLFSGDFDKNNAYVEIKAGSGGVESQDWANMLVRMYSRWAVTHDFKTETVNLNIGELLGVKSATLHIKGDYAFGWMRTEKGIHRLVRKSPFDSSKRRHTSFTSVFVYPELTRKVHNIKINTNELRIDTYRSSGAGGQHVNTTDSAVRITHLPTKIVVECQSERSQHSNKERALTLLKTKLYDFDKKKGEVERINIEKKKAGICWGNQIRSYVLDAQRIKDLRTGVKNNNCEKVLNGELDLFIEASIKQGL
>CP016327.1|AUI73001.1|117534_120381_+|isoleucine--tRNA-ligase
MINVRYNNTLNLPKTTFPMRGNLSIKEPIRLNKWKQSEIYKKLRQDRKGCKKFILHDGPPYANGHIHIGHAVNKILKDIIIKSKNLEGCDSWYVPGWDCHGLPIELNILKNNNGKFLTSNKIMLYCRKYVEKQIYSQKVDFIRLGILGDWDNAYRTMDFINQAGIIRSLSAIVKKGYVFRGFKPVNWCFQCSSALAESEVDFLEKVSESIDVAFFCIDNYKLVKNFGVNNCIEKQIEVVIWTTTPWSIPANQAIHVLAFCIYVLVDVGVKFILLAEQLVENCLNRYQLNGKIIAKTFGKELEKVRLKHPLHNIDAFYDRITNIYIADYIAIKTGTGIIHASPAYGEDDFIVYSNLQYNENMLKLVKSNGFYIKYLSVFGGQLIWIANSEIINNLNNRIIAKELILHSYMYCWRHKNPLIKMATSQWFVGLDVGKISLRKKALECLKNVKVYPSSGKTRLYHMISNRPDWCISRQRSWGVPIPFFIKKKRCLLHQRIIEIMEIIAKKVQNEGSEVWIKIKSCEVFGDEDIVYKKITDILDVWFDSGTTHNHVLRGSNFILQKEDKADLYLEGLDQYRGWFHTSLITSAAISGHAPFNKLLSHCFTVDKNGQKMSKSIGNVVSPQTIISKYGADILRLWVVSKDYESEMTMSEDIIQLIADSYRRLRNTTRFMIANLSGFDQSKHGIDPEKLLALDRWALDISAKFQHAIKNSYKDYRFVDIYQQLCNFCTRELGSFYLDIIKDRQYTTQKNSLYRRSCQTTLYHIIEAMSRWITPICTFTAEEIYESLSVKRYNKSVLLETYYRELNPLPKGFVMGRVFWKIIKAVKSEVNKCLENYRKKNIIKSSLDANVTLYVSETYYKILSLLKGELRFVLITSSAFLKKSVNKTKTAIFTGLSGLQVLVQKSKYKKCERSWETLPDVGRYNKHPKLCARSIDNLPRGPGEVRLYV
>CP016327.1|AUI73000.1|117279_117519_+|30S-ribosomal-protein-S20
MDNNRARRQQNSSQRSIVRTYIKRVLKAIKLKKFKLCIEEFYKAQSVFDILADKNIISKRKSARIKSRLNLQIKKELQC
>CP016327.1|AUI72999.1|116303_117287_+|Obg-family-GTPase-CgtA
MQFIDETYILIEAGTGGTGCLSFSSLLRGSDGGNGGTGGNIFCIGDKYLNTLFFLNYNKVYKAQNGENGKPKKQNGNKGKDVFIKVPVGSMLRDAQTCELIGEIIIHRQNIKVAKGGTSGIGNLKTKRSKNMKGTIGESRNLYIELILLADVGCLGIPNSGKSTLIRSITSALPKVARYPFTTLRPFLGFVKLNKTYSFIITDVPGLIIGASQGLGLGLKFIKHLNRIKIICNLLDVMCNKVLDTTLGIISEIKTIYIDMFQKKRYLVLNKLDKLPKYKKSQVIEIVINGLTWRNKTTLFIISAKKKYGCYELKKSALTYLKRGING
>CP016327.1|AUI72998.1|116049_116316_+|50S-ribosomal-protein-L27
MAQKKAAGSSRNGRDSNSKRLGIKIYGGQYVNSGNIIVRQRGTKVLAGHGVGIGRDHTLFALINGCIFFYNIKKGNRKRKCVKIVCSL
>CP016327.1|AUI73008.1|136359_137793_+|glutamate--tRNA-ligase
MKKIRTRIAPSPTGTPHIGTAYISLLNYYFARINNGKVILRIEDTDSKRSKSKFENKILELLHWLGIQWHEGPDIGGKFGPYRQSERNNLYNKYVEKLIKVGKVFKCYRTSEELEKLRKCKVDKTLKEKDLQLDYKELKFRKNNNWPYVIRLKVPNKGKCVFYDVLRGSITMNWDQIDSQVLIKSDGTPTYHLANVVDDYLMGITNVIRGEEWITSTPKHKLLYDYFGWKQPEFCHLPLLRNPDKSKLSKRKQNNSIEFYRKMGYLPQTIINYLGSLGGVKTTKWYRKNTNMKTKVDIKSISLGGPIFDLDKLSWLNGIYIRSMKNETLIQVMYEWAKDYIHKILPTIKPRIKILTDIIHLSEQVFYGLPKLKKEDFKVIALKKKLQRKVLKHLWLQLEYIEKWDKQNILYKVKQVSNQLQMKMKTIIAPIFIAINGRLISTSVINTIVILGKDITRIRIKQAIKLIGGITLKHENK
>CP016327.1|AUI73009.1|137823_140472_+|2-oxoglutarate-dehydrogenase-E1-component
MKIALDNVSYLEELYEQYKNKGNVTEEWRQIFDYITKQECRFKTIKTCEKNTRKQMSVLKLITNYRYMGHKKAHINPISGKNKVKAIQLSLHKLNIKDLNKAFNNGVGQNKSKLKEIIDVLDKTYCSSIGCEFRHILNNVEILWLEQSFESVRNKYSQKKNISLHILGLITAAEALEAYLSSKFPGTKRFGIEGGESLIHMLYETIQRAGNYGIKEIFMGMAHRGRINVLVNILRKSPADIIKEFEGKQIYEAYSGDVKYHQGLSSNIKTKGGDVKLNLAFNPSHLEIVYPVIEGAVRARQDYMNDTTKVLPVVVHGDTAFAGQGVVMETLQISKIKEYNTGGTLHILINNQIGFTTYKHNARSTKYCSDIAKMFNYPVLHVNGDDPEAVHYVTQIAVDYRNKFKKDMVIDMICYRRRGHNEADEPSITQPIMYKKIKNNPTTRELYSNHLLKQGLISKSDVKQMVSLYRHKLNYDSNKKAYKKTTGSMYKFHEEDLNDTSFSIKRMRELAEKLCDLGELKVQSKVAKIYSNRRKLVSSNSIKINWGFAELLSYASLLDEGYGIRITGQDTGRGTFSHRLAVIHNQKDGARWTPLQHIKKGQQKFTIVDSSLSEEAALAFEYGYSTTSKNMFVAWEAQFGDFANGAQVVIDQFISSGENKWGSLCSLTLLLPHGYEGQGPEHSSARIERFIQLCAEQNMQVCVPTTPSQVFHLIRSQAKRKNRKPLILMQPKSLLRHKYARSSFEDLSNGRFKTVIGETEKIKPDIVKRVILTSGKVYYDLVAYRKEKNIYETAILRIEQIYPFPEKSIIKKISIYSKCEHIIWCQEEPKNQGAWYQIKYFLNKKLKIRLKFVGRTSASAPASGYFDAHLKQQANLIKEAFF
>CP016327.1|AUI73010.1|140640_141717_+|2-oxoglutarate-dehydrogenase
MLEVVSPTEGFLQNIKIPVGKKCKSEQLLGIIVAQKEEGFYSSGSSSTSTNIKQQKLCKKEQKVDESEKQELKQFYKQAIELEESYSPEVRKAKTSIDVENLFENGTVKEKRVNIRKENVKYSINEIGVKRVQLSRLRQTITKRIVKAQKNAAMLTTYNEVDMGNILEIRTKYRELFEKKHGTKLGLMGFFVKACTVALKQFKKVNAVIDDKEIVYHNYQDIGIAVSTNRGLVVPILRHTDSIKIEEIEKKIMDFRKRGVDGKLSIKELTGGTFTISNGGVFGSLFSTPIINPPQTAILGMHKIQNRPVVLKGEIVIRPMMYLALSYDHRLIDGKDAVNFLFFVKELLEQPIRFILNI
>CP016327.1|AUI73011.1|141737_143156_+|dihydrolipoyl-dehydrogenase
MVSLFDVIVIGSGPAGYVAAIRSAQLGLKTACVEQWMNNGRVVYGGTCLNVGCIPSKTLLEISHKFIDAKANFEKIGINFENISINVKKMIRHKNKIVYSLNDGIAALFKANGVVVLRGSGKILTKKTVEVLHKGKLCNLKAKNIIIASGSIPRCLNQVPFNGDTIIDSAAALNLQEVPNRLGIIGAGIIGIELGSVWSRLGSKVTIFESLDKLLPVIDFSLSKQISQILKKQGLNIKLNVRIIGSEIVNNEVKVRFIDPFGEHCLTFDKLIVCIGRMPFTQSLIDKECGLVIATNGFIKVDRQCKTNLSGIYAVGDVVRGPMLAHKAAQEGIMVAELIAGNQVQLNYDTIPGVIYTSPEVAWVGKNEQQIISYGIKNYKIGIFPFANCGRARTSNEIQGLVKIITDVNDIILGVHIIGHNASELIAQGVIAMEFSSSAEDLALTCFAHPTLSEAIHEAACTASLGNTIHNI
>CP016327.1|AUI73152.1|144989_145277_+|30S-ribosomal-protein-S6
MNYEINILLNVSNDNLTSENIKKLIKIIIENNGRITKLEDLGNLNLYYLIKKQKQANIILINIDCEKYVIKKLEKRLKYNEVIIRYIIIKNLRQK
>CP016327.1|AUI73012.1|145299_145539_+|30S-ribosomal-protein-S18
MLFRKKKYCRFTAEKVKEIDYKKNDILKLYIAENGKIIPSRITGTKVRYQRKLTKAIKKARYFGLLPYTDKNYNKNGGC
>CP016327.1|AUI73151.1|145544_145976_+|50S-ribosomal-protein-L9
MNVILISKNSNSGKQGTIVSVNKGYARNFLIRKGFAIIAKKKNIDYLKQMRKHYLKEYKLYIYKIKTKLKNVKIEIFCKSGQTGKIVGSIGRRYLSKVFYEKYEIKINKKHITIKKNIIKKFGEYKISLYEQINIKINIQKYK
>CP016327.1|AUI73013.1|145972_147331_+|replicative-DNA-helicase
MKKIINDKKQTKTPPHSVEAEKALLGGVMLDNAAWKKISEIIKNEDFYSIEHKYIFDAITHIAEKNKKVDMVTVAESLETNNKLQKIGGISYLTELSRNTHSIHNIVAYADIVRECSNLRNLIRISKKIAEEAFNRNGKKVQDIIHKAEKLILTMAESRYRVKKTNLLNLNELLNKTINSINKMYSTKSSMTGLLTGFNELDNMTSGFQKADLIIIAGRPSMGKTSFAMNIVEYIIKNKKSDPVIIFSMEMPAEQLILRLLSSVGRIDQTNIRKGNIGEEDWLKLTESLKKIKNCKLYIDDTPMITPIDIRKTIKKCIRDTGKISLIMIDYLQLMHVSSSFISYNRTAEISEISRSLKSIAKEFNCPILAVSQLNRSLEQRNNKRPIISDLRESGAIEQDADLILFIYRDEVYNSDCLDNKGIAELIIGKQRNGPIGVINIRFTGKYTKFEN
>CP016327.1|AUI73014.1|148082_149105_-|tRNA-N6-adenosine(37)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MIILGIETSCDDTCIAIYDTKSGLITTKKYTQTIHTIFGGVIPKFSSFYHLNKIIPIIKSLFFNFQIHTTTINAIAYTAGPGLYQSLLIGAYIAYSISYTLKLPILGINHLEGHIFSAMINKKKPDFPFICLLISGGNTQLIDVQNIGHYKILGESKDVSLGETFDKIAKVLKLYYPGGVRLSHLACFGKIKKQNFPKILRNNITFSFSGLKTYILNYLKQFKYTNKYQYKANLAKSFEEYVLNMLSYKCYKALINYGRSCLLISGGVSANKTLRKHFYLFFKNKLNNFQITFPDQVLCTDNAAMIAYVGALRLTSGEKITNKLLIRPTWCLEELKYPLF
>CP016327.1|AUI73015.1|149145_149361_+|30S-ribosomal-protein-S21
MPYIKIRENESFEVALRRFKRSCEKGGLLAEVRRREFYEKPTTVRKRKAAAAIKRYIKKIKREHTRFERKY

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Crispr_ID: CP016327_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP016327_2

149462-149592

Orphan

Consensus_repeat	Method
CTAATAAATAAACCTCAAACATAACTTAAATCTTAAAAGCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP016327_2

>merge|CP016327|2|149462-149592|CRISPRCasFinder
CTAATAAATAAACCTCAAACATAACTTAAATCTTAAAAGCAACCTCTAAAATCTAAAATCTTAAAAGCAACCTAAAACAAACACATCTACTAACAAATAAACCTCAAACATAACTTAAATCTTAAAAGCAA

>CP016327|2|2|149462-149592|CRISPRCasFinder
CTAATAAATAAACCTCAAACATAACTTAAATCTTAAAAGCAA	CCTCTAAAATCTAAAATCTTAAAAGCAACCTAAAACAAACACATCTA
CTAACAAATAAACCTCAAACATAACTTAAATCTTAAAAGCAA

Protein	Signature genes	Signature genes Name	Protein_function
CP016327.1\|AUI73022.1\|157602_157863_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
CP016327.1\|AUI73010.1\|140640_141717_+\|2-oxoglutarate-dehydrogenase	unknown	unknown	gnl\|CDD\|235571
CP016327.1\|AUI73024.1\|161907_162483_+\|thioredoxin	unknown	unknown	gnl\|CDD\|132384
CP016327.1\|AUI73009.1\|137823_140472_+\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499
CP016327.1\|AUI73151.1\|145544_145976_+\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
CP016327.1\|AUI73018.1\|152460_154410_+\|cytochrome-o-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|131890
CP016327.1\|AUI73153.1\|161421_161898_+\|sulfur-relay-protein-TusE	unknown	unknown	gnl\|CDD\|213798
CP016327.1\|AUI73021.1\|155263_156118_+\|protoheme-IX-farnesyltransferase	unknown	unknown	gnl\|CDD\|184001
CP016327.1\|AUI73020.1\|154974_155274_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225667
CP016327.1\|AUI73011.1\|141737_143156_+\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235779
CP016327.1\|AUI73014.1\|148082_149105_-\|tRNA-N6-adenosine(37)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
CP016327.1\|AUI73016.1\|149873_151610_+\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|235549
CP016327.1\|AUI73023.1\|157886_160022_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
CP016327.1\|AUI73017.1\|151639_152458_+\|ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|182518
CP016327.1\|AUI73019.1\|154427_154973_+\|cytochrome-o-ubiquinol-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|239214
CP016327.1\|AUI73015.1\|149145_149361_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
CP016327.1\|AUI73152.1\|144989_145277_+\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
CP016327.1\|AUI73013.1\|145972_147331_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
CP016327.1\|AUI73008.1\|136359_137793_+\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
CP016327.1\|AUI73012.1\|145299_145539_+\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997

Protein	Function_ID	Function_description	E-value
CP016327.1\|AUI73022.1\|157602_157863_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	1.83746e-28
CP016327.1\|AUI73010.1\|140640_141717_+\|2-oxoglutarate-dehydrogenase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	1.95907e-152
CP016327.1\|AUI73024.1\|161907_162483_+\|thioredoxin	gnl\|CDD\|132384	TIGR03341, YhgI_GntY, IscR-regulated protein YhgI. IscR (TIGR02010) is an iron-sulfur cluster-binding transcriptional regulator (see Genome Property GenProp0138). Members of this protein family include YhgI, whose expression is under control of IscR, and show sequence similarity to IscA, a known protein of iron-sulfur cluster biosynthesis. These two lines of evidence strongly suggest a role as an iron-sulfur cluster biosynthesis protein. An older study designated this protein GntY and suggested a role for it and for the product of an adjacent gene, based on complementation studies, in gluconate utilization. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	4.30417e-64
CP016327.1\|AUI73009.1\|137823_140472_+\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
CP016327.1\|AUI73151.1\|145544_145976_+\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	9.4583e-24
CP016327.1\|AUI73018.1\|152460_154410_+\|cytochrome-o-ubiquinol-oxidase-subunit-I	gnl\|CDD\|131890	TIGR02843, Cytochrome_bo3_ubiquinol_oxidase_subunit_1, cytochrome o ubiquinol oxidase, subunit I. Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain which reacts with oxygen, reducing it to water with the concomitant transport of 4 protons across the membrane. Also known as the cytochrome bo complex, cytochrome o ubiquinol oxidase contains four subunits, two heme b cofactors and a copper atom which is believed to be the oxygen active site. This complex is structurally related to the cytochrome caa3 oxidases which utilize cytochrome c as the reductant and contain heme a cofactors, as well as the intermediate form aa3 oxidases which also react directly with quinones as the reductant. [Energy metabolism, Electron transport].	0
CP016327.1\|AUI73153.1\|161421_161898_+\|sulfur-relay-protein-TusE	gnl\|CDD\|213798	TIGR03342, dsrC_tusE_dsvC, sulfur relay protein, TusE/DsrC/DsvC family. Members of this protein family may be described as TusE, a partner to TusBCD in a sulfur relay system for 2-thiouridine biosynthesis, a tRNA base modification process. Other members are DsrC, a functionally similar protein in species where the sulfur relay system exists primarily for sulfur metabolism rather than tRNA base modification. Some members of this family are known explicitly as the gamma subunit of sulfite reductases.	1.22505e-17
CP016327.1\|AUI73021.1\|155263_156118_+\|protoheme-IX-farnesyltransferase	gnl\|CDD\|184001	PRK13362, PRK13362, protoheme IX farnesyltransferase; Provisional.	8.85473e-78
CP016327.1\|AUI73020.1\|154974_155274_+\|hypothetical-protein	gnl\|CDD\|225667	COG3125, CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Energy production and conversion].	6.79755e-14
CP016327.1\|AUI73011.1\|141737_143156_+\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235779	PRK06327, PRK06327, dihydrolipoamide dehydrogenase; Validated.	0
CP016327.1\|AUI73014.1\|148082_149105_-\|tRNA-N6-adenosine(37)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	1.58556e-128
CP016327.1\|AUI73016.1\|149873_151610_+\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|235549	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated.	0
CP016327.1\|AUI73023.1\|157886_160022_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
CP016327.1\|AUI73017.1\|151639_152458_+\|ubiquinol-oxidase-subunit-II	gnl\|CDD\|182518	PRK10525, PRK10525, cytochrome o ubiquinol oxidase subunit II; Provisional.	1.28642e-98
CP016327.1\|AUI73019.1\|154427_154973_+\|cytochrome-o-ubiquinol-oxidase-subunit-III	gnl\|CDD\|239214	cd02863, Ubiquinol_oxidase_III, Ubiquinol oxidase subunit III subfamily. Ubiquinol oxidase, the terminal oxidase in the respiratory chains of aerobic bacteria, is a multi-chain transmembrane protein located in the cell membrane. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Ubiquinol oxidases feature four subunits in contrast to the 13 subunit bovine cytochrome c oxidase (CcO). Subunits I, II, and III of bovine CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Subunits I, II and III of ubiquinol oxidase are homologous to the corresponding subunits in bovine CcO. Although not required for catalytic activity, subunit III appears to be involved in assembly of the multimer complex.	7.61695e-49
CP016327.1\|AUI73015.1\|149145_149361_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	4.80306e-14
CP016327.1\|AUI73152.1\|144989_145277_+\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	1.37071e-15
CP016327.1\|AUI73013.1\|145972_147331_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
CP016327.1\|AUI73008.1\|136359_137793_+\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
CP016327.1\|AUI73012.1\|145299_145539_+\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	2.69052e-30

>CP016327.1|AUI73015.1|149145_149361_+|30S-ribosomal-protein-S21
MPYIKIRENESFEVALRRFKRSCEKGGLLAEVRRREFYEKPTTVRKRKAAAAIKRYIKKIKREHTRFERKY
>CP016327.1|AUI73014.1|148082_149105_-|tRNA-N6-adenosine(37)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MIILGIETSCDDTCIAIYDTKSGLITTKKYTQTIHTIFGGVIPKFSSFYHLNKIIPIIKSLFFNFQIHTTTINAIAYTAGPGLYQSLLIGAYIAYSISYTLKLPILGINHLEGHIFSAMINKKKPDFPFICLLISGGNTQLIDVQNIGHYKILGESKDVSLGETFDKIAKVLKLYYPGGVRLSHLACFGKIKKQNFPKILRNNITFSFSGLKTYILNYLKQFKYTNKYQYKANLAKSFEEYVLNMLSYKCYKALINYGRSCLLISGGVSANKTLRKHFYLFFKNKLNNFQITFPDQVLCTDNAAMIAYVGALRLTSGEKITNKLLIRPTWCLEELKYPLF
>CP016327.1|AUI73013.1|145972_147331_+|replicative-DNA-helicase
MKKIINDKKQTKTPPHSVEAEKALLGGVMLDNAAWKKISEIIKNEDFYSIEHKYIFDAITHIAEKNKKVDMVTVAESLETNNKLQKIGGISYLTELSRNTHSIHNIVAYADIVRECSNLRNLIRISKKIAEEAFNRNGKKVQDIIHKAEKLILTMAESRYRVKKTNLLNLNELLNKTINSINKMYSTKSSMTGLLTGFNELDNMTSGFQKADLIIIAGRPSMGKTSFAMNIVEYIIKNKKSDPVIIFSMEMPAEQLILRLLSSVGRIDQTNIRKGNIGEEDWLKLTESLKKIKNCKLYIDDTPMITPIDIRKTIKKCIRDTGKISLIMIDYLQLMHVSSSFISYNRTAEISEISRSLKSIAKEFNCPILAVSQLNRSLEQRNNKRPIISDLRESGAIEQDADLILFIYRDEVYNSDCLDNKGIAELIIGKQRNGPIGVINIRFTGKYTKFEN
>CP016327.1|AUI73151.1|145544_145976_+|50S-ribosomal-protein-L9
MNVILISKNSNSGKQGTIVSVNKGYARNFLIRKGFAIIAKKKNIDYLKQMRKHYLKEYKLYIYKIKTKLKNVKIEIFCKSGQTGKIVGSIGRRYLSKVFYEKYEIKINKKHITIKKNIIKKFGEYKISLYEQINIKINIQKYK
>CP016327.1|AUI73012.1|145299_145539_+|30S-ribosomal-protein-S18
MLFRKKKYCRFTAEKVKEIDYKKNDILKLYIAENGKIIPSRITGTKVRYQRKLTKAIKKARYFGLLPYTDKNYNKNGGC
>CP016327.1|AUI73152.1|144989_145277_+|30S-ribosomal-protein-S6
MNYEINILLNVSNDNLTSENIKKLIKIIIENNGRITKLEDLGNLNLYYLIKKQKQANIILINIDCEKYVIKKLEKRLKYNEVIIRYIIIKNLRQK
>CP016327.1|AUI73011.1|141737_143156_+|dihydrolipoyl-dehydrogenase
MVSLFDVIVIGSGPAGYVAAIRSAQLGLKTACVEQWMNNGRVVYGGTCLNVGCIPSKTLLEISHKFIDAKANFEKIGINFENISINVKKMIRHKNKIVYSLNDGIAALFKANGVVVLRGSGKILTKKTVEVLHKGKLCNLKAKNIIIASGSIPRCLNQVPFNGDTIIDSAAALNLQEVPNRLGIIGAGIIGIELGSVWSRLGSKVTIFESLDKLLPVIDFSLSKQISQILKKQGLNIKLNVRIIGSEIVNNEVKVRFIDPFGEHCLTFDKLIVCIGRMPFTQSLIDKECGLVIATNGFIKVDRQCKTNLSGIYAVGDVVRGPMLAHKAAQEGIMVAELIAGNQVQLNYDTIPGVIYTSPEVAWVGKNEQQIISYGIKNYKIGIFPFANCGRARTSNEIQGLVKIITDVNDIILGVHIIGHNASELIAQGVIAMEFSSSAEDLALTCFAHPTLSEAIHEAACTASLGNTIHNI
>CP016327.1|AUI73010.1|140640_141717_+|2-oxoglutarate-dehydrogenase
MLEVVSPTEGFLQNIKIPVGKKCKSEQLLGIIVAQKEEGFYSSGSSSTSTNIKQQKLCKKEQKVDESEKQELKQFYKQAIELEESYSPEVRKAKTSIDVENLFENGTVKEKRVNIRKENVKYSINEIGVKRVQLSRLRQTITKRIVKAQKNAAMLTTYNEVDMGNILEIRTKYRELFEKKHGTKLGLMGFFVKACTVALKQFKKVNAVIDDKEIVYHNYQDIGIAVSTNRGLVVPILRHTDSIKIEEIEKKIMDFRKRGVDGKLSIKELTGGTFTISNGGVFGSLFSTPIINPPQTAILGMHKIQNRPVVLKGEIVIRPMMYLALSYDHRLIDGKDAVNFLFFVKELLEQPIRFILNI
>CP016327.1|AUI73009.1|137823_140472_+|2-oxoglutarate-dehydrogenase-E1-component
MKIALDNVSYLEELYEQYKNKGNVTEEWRQIFDYITKQECRFKTIKTCEKNTRKQMSVLKLITNYRYMGHKKAHINPISGKNKVKAIQLSLHKLNIKDLNKAFNNGVGQNKSKLKEIIDVLDKTYCSSIGCEFRHILNNVEILWLEQSFESVRNKYSQKKNISLHILGLITAAEALEAYLSSKFPGTKRFGIEGGESLIHMLYETIQRAGNYGIKEIFMGMAHRGRINVLVNILRKSPADIIKEFEGKQIYEAYSGDVKYHQGLSSNIKTKGGDVKLNLAFNPSHLEIVYPVIEGAVRARQDYMNDTTKVLPVVVHGDTAFAGQGVVMETLQISKIKEYNTGGTLHILINNQIGFTTYKHNARSTKYCSDIAKMFNYPVLHVNGDDPEAVHYVTQIAVDYRNKFKKDMVIDMICYRRRGHNEADEPSITQPIMYKKIKNNPTTRELYSNHLLKQGLISKSDVKQMVSLYRHKLNYDSNKKAYKKTTGSMYKFHEEDLNDTSFSIKRMRELAEKLCDLGELKVQSKVAKIYSNRRKLVSSNSIKINWGFAELLSYASLLDEGYGIRITGQDTGRGTFSHRLAVIHNQKDGARWTPLQHIKKGQQKFTIVDSSLSEEAALAFEYGYSTTSKNMFVAWEAQFGDFANGAQVVIDQFISSGENKWGSLCSLTLLLPHGYEGQGPEHSSARIERFIQLCAEQNMQVCVPTTPSQVFHLIRSQAKRKNRKPLILMQPKSLLRHKYARSSFEDLSNGRFKTVIGETEKIKPDIVKRVILTSGKVYYDLVAYRKEKNIYETAILRIEQIYPFPEKSIIKKISIYSKCEHIIWCQEEPKNQGAWYQIKYFLNKKLKIRLKFVGRTSASAPASGYFDAHLKQQANLIKEAFF
>CP016327.1|AUI73008.1|136359_137793_+|glutamate--tRNA-ligase
MKKIRTRIAPSPTGTPHIGTAYISLLNYYFARINNGKVILRIEDTDSKRSKSKFENKILELLHWLGIQWHEGPDIGGKFGPYRQSERNNLYNKYVEKLIKVGKVFKCYRTSEELEKLRKCKVDKTLKEKDLQLDYKELKFRKNNNWPYVIRLKVPNKGKCVFYDVLRGSITMNWDQIDSQVLIKSDGTPTYHLANVVDDYLMGITNVIRGEEWITSTPKHKLLYDYFGWKQPEFCHLPLLRNPDKSKLSKRKQNNSIEFYRKMGYLPQTIINYLGSLGGVKTTKWYRKNTNMKTKVDIKSISLGGPIFDLDKLSWLNGIYIRSMKNETLIQVMYEWAKDYIHKILPTIKPRIKILTDIIHLSEQVFYGLPKLKKEDFKVIALKKKLQRKVLKHLWLQLEYIEKWDKQNILYKVKQVSNQLQMKMKTIIAPIFIAINGRLISTSVINTIVILGKDITRIRIKQAIKLIGGITLKHENK
>CP016327.1|AUI73016.1|149873_151610_+|RNA-polymerase-sigma-factor-RpoD
MFEILELNIKELINKGKEQGFLINSEICELFDNEKVDEIICIVKDKGINIIDKISEVENIYKNVEDQNICKKENDIRHLDPVRIYMREMGKIDLLDRKGEIEIAKKIEEGTKEIMAALVYLPGAVDYVLEIYDLIIKDTEVNFYDLFTGFMYLKKVKKEEKLKAKNNVLISETYNEGPDHILTKSLFEKIRKQNKKVKINVLTYGYKSKEAKMELKLLSKYFSKIKFLPKHFEGLLSKVRLSIKNIRFHENLILKNMVKMVKLSRKEIINSFIGNEANLKWLDKFILNTEKTISRKNYRSNILKSQKKILLEQQQRNLSVVELKEINRKLLIGEYKAHKAKQELIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINRLKRLSRKMLQERGIEPTPEELSNRLEISENKIRKILKIAKEPVSIETPIGEDEDYYLSDVIEDNITASPIDAATDEGLVEATRNVLSELTAREAKVLRMRFGIDMSTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEALRSFLEE
>CP016327.1|AUI73017.1|151639_152458_+|ubiquinol-oxidase-subunit-II
MNKRIYLSLLLILILNKEGYIHVLTPGGKVCLEQKYLIFIATLLMLIIVIPVILMTIKFNYKYRETNKKIEYKPEWDYSKKVELIVWGVPVMIILILGLITLKSTHELDPQKTLINNKNNVITVEVISLDWKWLFIYKNIGIATINQLVLPINVPIDLKITSETVMNSFFIPQICSQMYAMSGMKTINYLLSNKKGTYIGLSTNFSGKGFSGMKFKVLVVSLKKFESWIKKIKEYKRNINYKILVKETINNKIEYYSSLEKKYLKLLSNKGV
>CP016327.1|AUI73018.1|152460_154410_+|cytochrome-o-ubiquinol-oxidase-subunit-I
MLGRLTFESIPYKEPIILFTGIFVFLVIIFILSIITYLKKWIYIWNYWIRTLDHKKIGIMYIIFALIMLIRGFTDAVMMRLQQVIAYKNNIGYLPSYHYDQIFTVHGVIMIFFMAMPFMFGLMNIIVPLQIGARDVAFPFLNSLSLWLTVFSGVLINISLFIGEFASTGWLAYPPLSGIEFSKGVGVDYWIWSLQISGIGTLIAGINFVVTILKMRAPGMEFMRLPIFTWTILCSNLLIIMSFPILTATISLLTLDRYLNMQVFTNHFGGNPMMYVNLIWAWGHPEVYILILPAFGIYSEIVSTFCKKKLFGYNLLVYATIVITGLSFIVWLHHFFTMGAGADVNAFFGISTMIISIPTGVKIFNWLFTMYKGKIEFCIPMLWTVGFLIAFSIGGMAGVLLAIPGVDFLLHNSLFLVAHFHNVIIGGVLFGYLAGLNYWFPKIFGFKLNEKIGKYTVVCWLIGLFVAFVPLYILGVLGMTRRVSYYNNKIWHRFLLIAMFGTIIILFGVIGQVLQVIRSIIEKDNNKDYSGDMWNGRTLEWSISSPPNSYNFANIPYIIDRDQVLLLKKRQYVKKNKYKKIKMPKDTCKAFFISLFSLIFSFSMVWYIWWLSIIGFVGMISTYMFYLYSTKKVSYIKVEEIKNNEKRFM
>CP016327.1|AUI73019.1|154427_154973_+|cytochrome-o-ubiquinol-oxidase-subunit-III
MYKIDKVSEKNILLGFWIYILSDCILFSVLFAVYVLLSKNTIRYNMCLVNIETLILLLSSFIIGIVFFKLKKKQIVFNLFIVLLLGVLFVILEMKELINLINNGFTPKTSSFISAYLTLIGTHCIHIVVGIYWGICLLLNILFKGLTIKNKTSLLCLSIFWHFLHIIWVCIYTIVYLIGVL
>CP016327.1|AUI73020.1|154974_155274_+|hypothetical-protein
MNLINHLKDCIFGFLISFILTTLAYMFVVNISFPILVIKLVTLLFAAIQIFVQLIYFINIKEVSKLDKNIYIGSLLFTLIIIFIILGGSLWIFYNINGK
>CP016327.1|AUI73021.1|155263_156118_+|protoheme-IX-farnesyltransferase
MVNKNYLVIAKPNIIIGNVISILGGIFLSYKWNIKILIGSLLGIILIIVFSCILNNYIDLDIDSIMLRTNTRVLVTNFLFIKTAINYAYILFLLGLVILYKLTNILVISLSLIGIVIYILMYSLYYKRNSPYSTLIGSLAGSLPPLMGYCSISNNIDLAAIIIFLIYWLWQIPHSYSIAILKLNEYMLASIPVFPISKGLLTTKKHIIVYIFCFIIAEFMLFLNGYTGLFYFSLMSLLSFYWLFVAILTYKSNRVEFVTKQIFFISILIIVCLNLMIFIDVKNP
>CP016327.1|AUI73022.1|157602_157863_+|30S-ribosomal-protein-S15
MTGKNIIINAFGKNKIDTGNSEVQIAIITNNIYKLQIHLKKNKYDYHSQLGMTRMVNKRRKLLTYLKKTQVSRYKHLVKTLKLRHK
>CP016327.1|AUI73023.1|157886_160022_+|polyribonucleotide-nucleotidyltransferase
MSSFVKKQFKYGGKTICLETGKIAKNTKGSVVITIDKTIVLCTVVVNKVLKNKQCLPLSVFYQEKYYAAGKIPGGFFKREGRATEKEILTSRLIDRPIRPNINNFYNNEIQIICTVLSAKKNTDITAMIGTYAALGITDIPLKQSMGVARVGFNKEVGFWLDITKEKCSELDIVVAGTKKSVLMVETEAKQKTEAIIIGAISFAHRELQVVIKNIKEFSKDYKTKNKNINNQLKSNKLKVHISSFKDYLFKKFNHSINDTFYIVDKIKRKEALIIITNQVFETFINHFLTLFYIYENLNLIIKKIFINFLFSIKKRIDGRDFKTIRSLSIELCCLPCTHGSALFCRGDTQAIVALTLGSLRDAQFIEGLEEDRYDNIMFHYNFTPYSVCEIGFIGMPKRREIGHGNLAKRAILGVVSKDEFPYSIRIVSEITESNGSSSMASVCGASLALMHAGVPLRTTVAGVSMGLITKKEHFFVLTDIVDEEDKFGDMDLKIAATLKGITALQMDIKQQGSKTDQKEILQRTLNQALEAIKQISAKMNVVISQSRKSISINAPSYVVLKIETEKLRDVIGKGGTTIKKICEFTNSAIEIQDDGNIHIYAKTKLNLQKAIEAIKLITEETKLNKLYRGKVIRIMEFGAFINLLPGIDGLVHVSQISSCHVTNIREFISEGDIVTVKVLEKDHKGKLKLSIKEIDPIEKSIFEAKIQSFI
>CP016327.1|AUI73153.1|161421_161898_+|sulfur-relay-protein-TusE
MDCEGFLKSIKNWSPYVGYIIANKEGRKLHKPHWEIILLLRKFYETYKIAPNMVTLINELKFINYKKGNSIYLLKVFRSYKKTMIKKTTSTNKKDYKTKYKMTVKAKTTKKTRLFTYVHKNTNITKKKEYMLKLYINAESPARIAARIAGLPKPNNCM
>CP016327.1|AUI73024.1|161907_162483_+|thioredoxin
MKNMNKSKIIITKSAQKYLANLLYNHNMATGVRIFINKQYAEPSIEFCYKLTDKDIKINLTKINVFLEKDSLPFIKNAVIDYIIDRLGGKLTIQIPKIETNWNLEHKVNFIIDKEINPILATHGGFIRLIKVTKENLAIFQFEGGCKGCVSVDFTLKKHVKRILLERIPELTEILDLTDHTDNIKAYYKKI

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Crispr_ID: CP016327_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP016327_3

195374-195726

Orphan

Consensus_repeat	Method
AAAAAAAGGTTTGTTAAAGAATAGA	CRISPRCasFinder

5 spacers

The CRISPR arrays of CP016327_3

>merge|CP016327|3|195374-195726|CRISPRCasFinder
AAAGAAGTGGTTGTTAAATAAAAAGAAGGGTTGTTAAAGTTTAAATGCTGTATGGTAAAGTTAAGAAGTGGTTGTTAATAAAAAAAAAGGTTTGTTAAAGAATAGAAATTAATAAAAAAAAAGGTTTGTTAAAGAATAGAAATTGATTTAAAAAAAGGTTTGTTAAAGAAAGAGGAGTTGTATGGAAGAGGAAAAGGTTTGTTAAAGTAAAAGGAGTTGTATGGAAGAGGAAAAGGTTTGTTAAAGTAAAGAAGTTAAGGTAGTTGTAAAAAAAAATAGGTATTTTATAGTGTAGTTGTTAATGTATGTGATTATGAATAGAGAATGAACAAAAAACTAAGCTAAAAAAGAGA

>CP016327|3|3|195374-195726|CRISPRCasFinder
AAAGAAGTGGTTGTTAAATAAAAAG	AAGGGTTGTTAAAGTTTAAATGCTGTATGGTAAAGTTAAGAAGTGGTTGTTAATAA
AAAAAAAGGTTTGTTAAAGAATAGA	AATTAATAAAAAAAAAGGTTTGTTAAAGAATAGAAATTGATTT
AAAAAAAGGTTTGTTAAAGAAAGAG	GAGTTGTATGGAAGAGGAAAAGGTTTGTTAAAGTAAAAGGAGTTGTATGGAAG
AGGAAAAGGTTTGTTAAAGTAAAGA	AGTTAAGGTAGTTGTAAAA
AAAAATAGGTATTTTATAGTGTAGT	TGTTAATGTATGTGATTATGAATAGAGAATGA
ACAAAAAACTAAGCTAAAAAAGAGA

Protein	Signature genes	Signature genes Name	Protein_function
CP016327.1\|AUI73036.1\|185973_187062_-\|chorismate-synthase	unknown	unknown	gnl\|CDD\|235438
CP016327.1\|AUI73047.1\|203178_204480_+\|HslU--HslV-peptidase-ATPase-subunit	unknown	unknown	gnl\|CDD\|235364
CP016327.1\|AUI73038.1\|192005_193673_-\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|235154
CP016327.1\|AUI73032.1\|176485_177805_-\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|237820
CP016327.1\|AUI73046.1\|202633_203158_+\|HslU--HslV-peptidase-proteolytic-subunit	unknown	unknown	gnl\|CDD\|235477
CP016327.1\|AUI73043.1\|200711_201812_-\|3-dehydroquinate-synthase	unknown	unknown	gnl\|CDD\|234565
CP016327.1\|AUI73048.1\|204515_204863_+\|phosphoribosyl-ATP-diphosphatase	unknown	unknown	gnl\|CDD\|179005
CP016327.1\|AUI73034.1\|181949_184364_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
CP016327.1\|AUI73031.1\|174832_176377_-\|30S-ribosomal-protein-S1	unknown	unknown	gnl\|CDD\|235775
CP016327.1\|AUI73035.1\|184571_185972_-\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
CP016327.1\|AUI73037.1\|191735_191957_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
CP016327.1\|AUI73040.1\|196219_196384_-\|50S-ribosomal-protein-L32	unknown	unknown	gnl\|CDD\|234901
CP016327.1\|AUI73033.1\|177810_178890_-\|prephenate-dehydratase	unknown	unknown	gnl\|CDD\|223155
CP016327.1\|AUI73154.1\|178873_181420_-\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
CP016327.1\|AUI73042.1\|199080_200703_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283599
CP016327.1\|AUI73041.1\|196394_197339_-\|pseudouridine-synthase	unknown	unknown	gnl\|CDD\|182909
CP016327.1\|AUI73030.1\|170911_171787_-\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
CP016327.1\|AUI73045.1\|202319_202523_-\|50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|376487
CP016327.1\|AUI73039.1\|195968_196202_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
CP016327.1\|AUI73044.1\|201798_202320_-\|shikimate-kinase	unknown	unknown	gnl\|CDD\|234654

Protein	Function_ID	Function_description	E-value
CP016327.1\|AUI73036.1\|185973_187062_-\|chorismate-synthase	gnl\|CDD\|235438	PRK05382, PRK05382, chorismate synthase; Validated.	0
CP016327.1\|AUI73047.1\|203178_204480_+\|HslU--HslV-peptidase-ATPase-subunit	gnl\|CDD\|235364	PRK05201, hslU, ATP-dependent protease ATPase subunit HslU.	0
CP016327.1\|AUI73038.1\|192005_193673_-\|2-isopropylmalate-synthase	gnl\|CDD\|235154	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated.	0
CP016327.1\|AUI73032.1\|176485_177805_-\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|237820	PRK14806, PRK14806, bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	0
CP016327.1\|AUI73046.1\|202633_203158_+\|HslU--HslV-peptidase-proteolytic-subunit	gnl\|CDD\|235477	PRK05456, PRK05456, ATP-dependent protease subunit HslV.	5.23621e-116
CP016327.1\|AUI73043.1\|200711_201812_-\|3-dehydroquinate-synthase	gnl\|CDD\|234565	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed.	2.28258e-152
CP016327.1\|AUI73048.1\|204515_204863_+\|phosphoribosyl-ATP-diphosphatase	gnl\|CDD\|179005	PRK00400, hisE, phosphoribosyl-ATP diphosphatase.	2.89747e-14
CP016327.1\|AUI73034.1\|181949_184364_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
CP016327.1\|AUI73031.1\|174832_176377_-\|30S-ribosomal-protein-S1	gnl\|CDD\|235775	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed.	0
CP016327.1\|AUI73035.1\|184571_185972_-\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
CP016327.1\|AUI73037.1\|191735_191957_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.33737e-34
CP016327.1\|AUI73040.1\|196219_196384_-\|50S-ribosomal-protein-L32	gnl\|CDD\|234901	PRK01110, rpmF, 50S ribosomal protein L32; Validated.	1.14946e-15
CP016327.1\|AUI73033.1\|177810_178890_-\|prephenate-dehydratase	gnl\|CDD\|223155	COG0077, PheA, Prephenate dehydratase [Amino acid transport and metabolism].	7.26826e-92
CP016327.1\|AUI73154.1\|178873_181420_-\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
CP016327.1\|AUI73042.1\|199080_200703_-\|hypothetical-protein	gnl\|CDD\|283599	pfam05977, MFS_3, Transmembrane secretion effector. This is a family of transport proteins. Members of this family include a protein responsible for the secretion of the ferric chelator, enterobactin, and a protein involved in antibiotic resistance.	2.85162e-169
CP016327.1\|AUI73041.1\|196394_197339_-\|pseudouridine-synthase	gnl\|CDD\|182909	PRK11025, PRK11025, 23S rRNA pseudouridine(955/2504/2580) synthase RluC.	1.72353e-78
CP016327.1\|AUI73030.1\|170911_171787_-\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	3.515e-151
CP016327.1\|AUI73045.1\|202319_202523_-\|50S-ribosomal-protein-L31	gnl\|CDD\|376487	pfam01197, Ribosomal_L31, Ribosomal protein L31.	2.33075e-29
CP016327.1\|AUI73039.1\|195968_196202_-\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	1.9027e-20
CP016327.1\|AUI73044.1\|201798_202320_-\|shikimate-kinase	gnl\|CDD\|234654	PRK00131, aroK, shikimate kinase; Reviewed.	4.69287e-56

>CP016327.1|AUI73038.1|192005_193673_-|2-isopropylmalate-synthase
MKFKFNNKKYCYFDEFPKLKNRDWIDKKISKTPILVSEDLRDGNQSLIEPMTVETKKTMWTLLINIGLKEVMVGFPSASKADFDFVRWLIRNKQIPEDVTIAVLVQARKPLIKRTFESLVGIKKSIIHFYNSTSPIQRDRVFKAQKEAIIAIAAKGAKYILHQTKKYKNVNWIIEYTPESFSNTEIDFTLTICETVVDILSQKNIYKVILNLPTTVDLTSPHVYADQIEYFCKNISKRDKIIISVHTHNDRGSAITSSEVAVLAGAQRIECTLLGNGERTGNLDLIAFAMNLYSQGIDPNIDLHCPEEIIDIVKLCTKLPIHPRHPWVGKLVYTAFSGSHQDAIRKSIKKQKQKEIWQVAYLPIDPKDIGRSYKSVIRLNSQSGKSGFAFLLERDYKIKLPRWIRNYLAPLVQNESERNMFELSSCELYSILKNNCFLETPFCLLNYYIYKNSLQICFYNKLIDNKVTYNMYFSILECKKILLAFIEMWTLHKLTLIKYYIQKINKYYIALIRINLHKHIFIGTAIDFDIISVCLKSILSAINKIFMDCRANKLT
>CP016327.1|AUI73037.1|191735_191957_+|cold-shock-protein
MATGTVKWFNDTKGYGFISPDDCGGDLFAHFSEIQADGFKSLQDGQKVTFEVTQGKKGLQAASIKVIKNKKCT
>CP016327.1|AUI73036.1|185973_187062_-|chorismate-synthase
MSGNTFGKLFTVTTFGESHGFALGAIIDGCPPGIEISEKYIQKQLNRRKPGSSKYTTQRREPDKVKILSGLLKGITTGTPIGLMIENIDQRSKDYKTIKKQFRPSHADYTYYQKYGIRDYRGGGRSSARETVMRVASGAIAKKYLSKLNVFIRGYISQIGSIKLPFVTWKIVYTNPFFCADPNKINYLEKYMKKLQREEDSIGAKLTLIAYGVPIGLGEPVFDKLDAELAHALMSINAVKGIEIGSGFLSVNQRGSEHRDEIKNKKIISNNSGGILGGISNGQSLVLNLSLKPTSSITIPGNTIDMYGNSIKVITKGRHDPCVGLRAIPIAEAMVALTLMDHFLRNRAQNIDVNVKNKIGVN
>CP016327.1|AUI73035.1|184571_185972_-|3-isopropylmalate-dehydratase-large-subunit
MTGQTLYEKIWSAHLIKSREDGTALIYIDRHLLHEVTSPQAFDGLRLNKRKIWRVDTNIATVDHNVPTNVEERIHGIKDELSRIQINLLKKNCKDFLINKFFNIKDVRQGIVHVIGPEIGATLPGMTVVCGDSHTSTHGAFAALAYGIGTSEVEHVLATQCLLQRKLKNMKFCINGELSVKVTAKDLILSIINIISTDGGTGYAVEFTGSTIKTLSMEGRMTLCNMAIEAGAKVGLISVDQNASNYLHGRALVPNIIWNKAIIKWKNLFSDYDAKFDEYIKINAKNIEPQVSWGTQPDMVVGVNGKIPNPKDYPKPDRKNIELAIKYMGLKSEQKIVDIKIDRIFIGSCTNSRIEDLRIAANFLKNNHIAATIKEAIVVPGSGNVKKQAELEGLDEVFISAGFEWREPGCSMCLAMNSDKLDLGDRCASTSNRNYESRQGYGGRTHLVSPAMAAAASIAGHFIDVR
>CP016327.1|AUI73034.1|181949_184364_-|preprotein-translocase-subunit-SecA
MLISTLVLKKNDREIKRICNIVYIINDLENHFVSIDNSLLRYKTLEYRKRIIKGDLLDMLLPEAFCTIREASKRILGIRHFDVQIIGGIVLHKGLVAEMKTGEGKTFVGTLPTYLNALPGHGVHVITTNEYLSKRDSKNLRPLYEFLGLSRKTIYAEQILQEKISAYKADITFGTNNDYGFDYLRNNLAYEIKEKFQRKLNFALLDEIDSILIDESRTPLIISGQLDSGTQIYYLIKNIAEKLIINKKNIYKHQQCDFVLDEKQKQVYLTEQGHKYIEFILKSKQIIKSSDSLYSVNNIDFVKKIKAALLALYLFKKNVDYLIINKEIIIVDENTGRVIPGKRWSDGLHQAIEAKEGVKIKQDGNVLAYITLQYFFRLYSKITGMTGTALTEAYEFKKFYKLDVLVIPTNKPIIRKDMNDLIFFSFKEKFEAIVKDIKNKLYKGRPLVVGTTSIIFSEYLSCILNFHKLSHNVLNANNHSYEANILSKAGRYSTITIATKMAGRGTDITLGGTKQNLFNKHLVKLSGGLHVIGTEHHESRRIDNQLKGRAGRQGEPGSNRFFVALEDTLMRVVCSNRLKKMIQILGLAYGESISHKIVNKALEQAQKNIESHKFAIRKQLLKYEKISSYHRKIVYHQRDAILFNQKLAEYITTTIKEVICKIICDYKNNSNIDKFEENIKTILNLNIYKWIKKNKYMLSSDTGYIFVKKKLKDKYTTNYIYNCKKFGKQRIKLFEKNTILQIIDIKWKEHLQNMDYIMNSIHLRYYIQKNPIEEYQKEALSLFKAFNINLKVFIISIISQYKNV
>CP016327.1|AUI73154.1|178873_181420_-|DNA-gyrase-subunit-A
MLEKYKNFLSIEDEVKQSYLDYALSVIIGRAIPDIRDGLKPVHRRVVFAMHELKNTCNKKHLKSARVVGDVIGKYHPHGDSAVYDAIVRMSQAFSMRYVLIDGQGNFGSIDGDNAAAMRYTEVRLSRITSEFLYDLENDTVNWVDNYDGTEKIPEVLPSRIPNLLLNGTSGIAVGMATNVPPHNIKEVINACLAFIEDKNISIEQLMTYIKGPDFPTSGIIYGTAGIVDAYKTGKGSLNIRAKHIIKKNKLNGTEKLIFTEIPYQVNKARLIEKIVELVKTKKISGIKELRDESDKDGLRVVVEINRYESSKFILNNILAHTQMEVIYSVNMVAVEKGKPKTFNLKEIIEAFINQRQEVLKRRTLYKLKQITKQKQIIEGLIIASSNIDSVIEIIKSASSFKDAKTKLQNVKWKKLKLFNTYFIDSSLLTEFQLKAIMDLRLYRLTSLESKLVLDDYKTTLKKITKFKKILSSFDYFMDWIRKELIEISYKYGDKRKTKITAIQKKISTVDIINEEQIVVTVSKTGFAKIQKNSVYQTQTRGGRGKLITITEKDEDVIEHLLFASNHDTILLFSDKGKVYWLNLYDIQNISRYARGRHLGKLLSLDVNEKITAILAINDEIQKTNNYIFFATALGKVKRTHIKRFNRQRNCGIIALILERGDSLICAAITYGQDNLIMLLDSNGKSIFFKQSEVRTMGRKAMGVLGMRLFSNNKVISLIVINNNKDSHIYYILTVSENGYVKRRKIEAFHFMNRGGHCIIAKCYNNRYGNLVSAIKVKDTDEIILITNRGKLIRTTVKEISCRSRIAQGLTFIRVNNDKFISFTNNRKVYSYKENKTKDKVLKNEQKI
>CP016327.1|AUI73033.1|177810_178890_-|prephenate-dehydratase
MNKKFKHYIKYIGNIDYQILKLISHRAKLVSQIQLADDKQNCSYNNGHEDRYFYSIKTSNKGPLSNKVLSKIFKSIVSACLKFKKKSQVAYLGPEGTFTQQAVLKYFGKSIKSIPVKDVFRTIENKIYNYGVVPVENSTEGIVNNTFDSFISSNLKICGEIILSIHHHLLIDKQNINKNIDKIYSHQQSFSQCRDWLKNNYPNAKKIAVASNAEASNLTQYKKNSAAIAGDLAASYYSLIKLAKNIEDRINNYTRFLILSDKDVAPTGYDKTYLMIYINNQIGSFYLLIEPFYRYNINILRLTTRPAPENKGVWNYIIFLEIKGHRKSKLVEKTLEEIYMRGAELKILGSFPEQLTKRI
>CP016327.1|AUI73032.1|176485_177805_-|3-phosphoshikimate-1-carboxyvinyltransferase
MKNKVKYIVQRAIKPIKGIIIVPGDKSISHRALMFGSLATGLTKITGFLDGYDSLSTLQSFREMGVEIYGPKQNILCISGAGIYGLKNPKKNIYLGNSGTSMRLLTGLLAGQKFDTKLTGDLSLNKRPMNRVAIPLRLMGAKIKTDKYGVPPVKILGNRLTGINYIMPIASAQVKSCLLLAGIYAKGETKIIEPGCTRDHTERMLKSFGYKIKQKENTISLVGGSKLKASKIKIPADISSAAFFLVAASIIPNSDLLLKKVGINPTRIGVINILRKMGADINLLNEKIFCNEPVADINIKYAKLKGIDIPLNQVPLAIDELPILLVAAANAEGITRLRGASELRVKECDRISAMAKGFKTIGVKTSVYEDGIDIFGTKVYKGGCVNSYGDHRIAMSFTIAALKATDVIVIDDCTNVSTSFPNFNLLLTTLGINIKEVKY
>CP016327.1|AUI73031.1|174832_176377_-|30S-ribosomal-protein-S1
MSESFAELFEKSLNKINLKPGSIIKAKIVYIDKDWIKVNAGLKSEVKINIDEFKNDKDDVVLKIGDRINVVIETLEDGFGETRLSREKANRLEKWKKLEKAFNNNEVVKGIILGKVKGGFTVDINSIRAFLPGSLVDIRTIRDTLHIEKKYIDFKLIKIDKKRKNIVVSRRAVLEIGNHILKQNISSDQFLSKSIKGIVKNITDYGAFIDLGGMDGLLHITDMAWKRVKHPSEIVSLGDEIEVKILRIDIDRNRVSLGLKQLSDDPWKKVKTCYPVGIKVKACITNITEYGCFAEIEDGIEGLVHVSELDWTNKNINPSKLVSIGERVEVMILEIDELRRRISLGIKQCRLNPWENFSLKYKKNDRVNGIVKSITDFGIFVGLNGGIDGLVHVSDISWKDLDEKSIRKNYRKGDTIETRILSIDPERERISLSIKHLKQDPILSFFNYKGSLLNGTIISITDLNSEFDTFVKFSTLFVTKSHYYHLKYKLNDRIECYINSIDQKYRHITMFEVC
>CP016327.1|AUI73030.1|170911_171787_-|4-hydroxy-tetrahydrodipicolinate-synthase
MIRGSIVAIVTPMKKNGVIDWASLRNLVKFHLENKTDAILAAGTTGENTTMTLEEHGKVIRTVVKEVNKKISVIAGIGANSTIEAVKLTKMAKDAGAEYGLSVTPYYNKPTQYGMYNHFKEVATVGLPIIVYNVPKRTGVDINNETILKLSLIKNIVGIKESSGNLARALELIEKYKKQDFYLLSGDDSTACEFILAGGHGVISVTSNIVPKLMHELCIASSKGKIELAYKLNKELMPLHYALSLESNPIPVKWALKKMGLVKKGIRLPLTWLATKYKKPLLKTLKSLEVI
>CP016327.1|AUI73039.1|195968_196202_-|acyl-carrier-protein
MSNLTKKIKSIVSKQFNINPLFITSTSLFIEDLGADSLDIIDLIMTLEDEFKLEISDEKSKHIKSIQDVVCLLNTFN
>CP016327.1|AUI73040.1|196219_196384_-|50S-ribosomal-protein-L32
MAVQKNKKTRSKRGMRRSHSALVLPTLNKEKFTGIIHRRHYIAEDGYYRGKKLF
>CP016327.1|AUI73041.1|196394_197339_-|pseudouridine-synthase
MTNYNKYKKIKSILFNQRLDNFLKKKLKGIKTSLVYRLIRKGFIRINNKTVTAKNKLQLGDKIRIPILYINKNQININETLRFSFSNTITYESNDWFIVNKPSGFAVHGGCIGNIGLIDALFLIRKDLNFIYLVHRLDKNTSGCLLLAKSINFLLFINFAFKNKYVEKCYLALVEGAWPIKFTYISAPIKKYKLHQNRVHYNIVNQLGKPSYTFFEICNKFTGFTLIKVFPITGRMHQIRVHTAYLGHPLLGDEKYGSIFGKKFSLYLKLKRLFLHSYFLRFPELKSGYFIQIKTKLDKDLFLVLNRANTYLTY
>CP016327.1|AUI73042.1|199080_200703_-|hypothetical-protein
MLISTKHSLNSQNNNLPNKKNSLFTPLTFKPFRIIWFADLIANLGTWAQSVASVWILTESHANSITLAMIQVVTALPLVLLSIISGVWADNYDRRKLMLLGMVLEFTGGALITSLDFFGFLTSTKLILSILGMSIGASLAVPAWQAAINEQVSKNQVTNAVILNSVNYNFARALGPVIGGILINTVGTAWVFLLNCLCYLGLIWAVWQWKQIYPKRILPPEHIYEGVISALKFAKYSKVMRSVMLRSFVFGLSASALWALLPVFAKTKASIYGYMLGALGTGAIVGSAIVNKLCQLVDTNIMISSASILLSIVMLLIGSLNIKLLIFGALMIGGSCWITVLASYNSSVQMLVPDWVKARALALYQTTLYAGLAIGSFGWGHIAGIIKVRLGLLLAGLLLLLTTIALLNLKLPKIDDKHHSIMHQIQPKYKLEFSKYKESIIVSIEYCIPVSNTNDFIDLIIKLRTVRLRNGAKSWSLYRNVEDKEIWQEIFLIRNWLQYLRMLSRITIADKIIIDKVNKMHIGTTPPRTYQGIQQIKPKM
>CP016327.1|AUI73043.1|200711_201812_-|3-dehydroquinate-synthase
MKIIKINLLNSKYPIYIGSGLLKKGVYIPYIFGKQIIIITNKKIASLYLDILKKKLLLYNVKVVILPDGEQQKNIASVKHIWDLLIYYGFNRTSTVIALGGGVIGDISGFTASCYQRGISIIHIPTTLLSQVDSSLGGKTGVNHEKVKNMIGSFYQPKAVIIDADLINTLNNRETSSGISEIIKYSLICDYIFFKWLETNIKKLVTLNKTILQFSILKSCIIKCKFFIKDEKEKNIRALLNLGHTFGHAIEQYKGYGNWLHGEAISVGIMIATKVSIEIGRLKASVLYRIYNLLLKAKLPIYVPVGMTSTNFIKLIKLDKKNLYEKTRLILLNRIGKGHIINNINEKFLCTLIDYLPKKIKLVLNR
>CP016327.1|AUI73044.1|201798_202320_-|shikimate-kinase
MLLSNVVLTGPMGTGKSTIGKLLSKKLNCKFYDIDNELENFCGCKIYEVFLLEGESSFRKREHKIIKDLVKKNGIVLSTGGGSIMNSKNIPLLRNKCIIIYLYTSISNQINRLDNTTDRPLLKRNKVNKSIYNIFKNRERIYHYLADIIINTENKLDLIIKEIKKRIVFFENH
>CP016327.1|AUI73045.1|202319_202523_-|50S-ribosomal-protein-L31
MKKNIHPKYKNVIIKCSCGNLFNIKSTLKKNLFVEICSHCHPVYCGKQKQLNIGNRIDRFNKQFGKK
>CP016327.1|AUI73046.1|202633_203158_+|HslU--HslV-peptidase-proteolytic-subunit
MTTIVSVRRNNKVAIAGDGQVTLGNTVVKSNASKVRKVYKGQVLSGFAGSTADAFTLFELFEAQLEKYQGNLIKASVELAKEWRNDRILRRLEAMLAVADKNISLIITGIGDILEPENGIITIGSGGNYAKAVAMALLENTNISAFDIVKKSITIAAEICVFTNKNISIELLDY
>CP016327.1|AUI73047.1|203178_204480_+|HslU--HslV-peptidase-ATPase-subunit
MTPKKIVEELNKYIIGQEKAKKAVAIALRNRWRRMQLDYKLRSEITPKNILMIGPTGVGKTEIARRLAKMAKAPFIKVEATKFTEVGYVGRDVESIIRDLIEISIKLVKEKANKQIKTKAKYAVEERIIDAILSSKNKENDNIENRKLIINKLRNGELENKEIDIKLTQKVSGIDIMTPPGMEEMANQLQSIFSNINKQTRENRKITIVEARKLLMEEESAKLISDETIKKSAIEAVEQNGIVFIDEIDKIVRRSGDNNGTEISREGVQRDLLPLIEGSSVSTRYGMIKTDHILFIASGAFHLSKPSDLIPELQGRLPIHVELSALSPKDFERILTEPSSALTRQYQALLKTEGITLEFTKEGIQRIAEIAYSFNESTENIGARRLHTVMELLLETPMYKGNEIDHKIIVTKEYVDKIMEKIALKEDYTKYIL
>CP016327.1|AUI73048.1|204515_204863_+|phosphoribosyl-ATP-diphosphatase
MDKKIESLFIILQNRKKSDHKTSYLSGLYNKDLIKTLNKIKEEINELIVTIKKFKDNKYKEKYLRYEIIKETADVWLHSLICISFLDICNTEIVEELYKRLNISGLKEKTNRVNN

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Crispr_ID: CP016327_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP016327_4

260199-260490

Orphan

Consensus_repeat	Method
TAGTTGTTTAGTTATTAGAGTTTA	CRISPRCasFinder

4 spacers

The CRISPR arrays of CP016327_4

>merge|CP016327|4|260199-260490|CRISPRCasFinder
TTTTTTTTTAGTTGTTAGATAATAATAAGTGCTTGTTGTTATTGGTTTACTTATTTTTGGTTATTAGTTTTGTTTATTTTGATGGTTGTTTTTACTAAAACTTTGTTTGTTTAAGTATCGATTGATGTTTAGTTGTTAGCCGTTTAAAATTTGTTGATTTGTAATTTGAGTGTATAATTTTTGATGGTTAGTAGTTGTTTAGTTATTAGAGTTTATATTTTTAGATGTATGTTGTAATATTTTAATGTTGTTAAAGAGGTTTATTGATAGTTGTTTAGTTATTAGAGTTTAG

>CP016327|4|4|260199-260490|CRISPRCasFinder
TTTTTTTTTAGTTGTTAGATAATA	ATAAGTGCTTGTTGT
TATTGGTTTACTTATTTTTGGTTA	TTAGTTTTGTTTATTTTGATGGTTGTTTTTACTAAAACTTTGTTTGTTTAAGTATCGA
TTGATGTTTAGTTGTTAGCCGTTT	AAAATTTGTTGATTTGTAATTTGAGTGTATAATTTTTGATGGTTAG
TAGTTGTTTAGTTATTAGAGTTTA	TATTTTTAGATGTATGTTGTAATATTTTAATGTTGTTAAAGAGGTTTATTGA
TAGTTGTTTAGTTATTAGAGTTTAG

Protein	Signature genes	Signature genes Name	Protein_function
CP016327.1\|AUI73089.1\|267712_267958_+\|Clp-protease	unknown	unknown	gnl\|CDD\|235422
CP016327.1\|AUI73088.1\|267016_267265_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178955
CP016327.1\|AUI73092.1\|274425_274869_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|274307
CP016327.1\|AUI73085.1\|257284_258130_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703
CP016327.1\|AUI73087.1\|261605_262967_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
CP016327.1\|AUI73079.1\|252745_253276_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340873
CP016327.1\|AUI73082.1\|254472_255831_+\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
CP016327.1\|AUI73156.1\|269971_271318_-\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
CP016327.1\|AUI73078.1\|251878_252709_+\|5,10-methylenetetrahydrofolate-reductase	unknown	unknown	gnl\|CDD\|273212
CP016327.1\|AUI73094.1\|281648_282902_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
CP016327.1\|AUI73084.1\|256804_257260_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
CP016327.1\|AUI73093.1\|278801_279662_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
CP016327.1\|AUI73083.1\|255827_256799_-\|glucokinase	unknown	unknown	gnl\|CDD\|234716
CP016327.1\|AUI73080.1\|253385_253586_+\|hypothetical-protein	unknown	unknown	unknown
CP016327.1\|AUI73091.1\|271418_273116_+\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
CP016327.1\|AUI73086.1\|258107_259709_+\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP016327.1\|AUI73095.1\|282901_283954_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234701
CP016327.1\|AUI73077.1\|246851_248150_-\|glutamate/aspartate:proton-symporter-GltP	unknown	unknown	gnl\|CDD\|183075
CP016327.1\|AUI73090.1\|268556_269939_+\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
CP016327.1\|AUI73081.1\|254196_254394_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP016327.1\|AUI73089.1\|267712_267958_+\|Clp-protease	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	2.21046e-29
CP016327.1\|AUI73092.1\|274425_274869_+\|peptidoglycan-binding-protein	gnl\|CDD\|274307	TIGR02802, Peptidoglycan-associated_lipoprotein, peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.	0.00287501
CP016327.1\|AUI73085.1\|257284_258130_+\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	5.97913e-83
CP016327.1\|AUI73087.1\|261605_262967_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	3.60454e-158
CP016327.1\|AUI73083.1\|255827_256799_-\|glucokinase	gnl\|CDD\|234716	PRK00292, glk, glucokinase; Provisional.	1.47784e-124
CP016327.1\|AUI73079.1\|252745_253276_-\|hypothetical-protein	gnl\|CDD\|340873	cd17315, MFS_GLUT_like, Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily. This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.12369e-31
CP016327.1\|AUI73082.1\|254472_255831_+\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	1.36646e-137
CP016327.1\|AUI73156.1\|269971_271318_-\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	1.09907e-125
CP016327.1\|AUI73078.1\|251878_252709_+\|5,10-methylenetetrahydrofolate-reductase	gnl\|CDD\|273212	TIGR00676, 510-methylenetetrahydrofolate_reductase., 5,10-methylenetetrahydrofolate reductase, prokaryotic form. The enzyme activities methylenetetrahydrofolate reductase (EC 1.5.1.20) and 5,10-methylenetetrahydrofolate reductase (FADH) (EC 1.7.99.5) differ in that 1.5.1.20 (assigned in many eukaryotes) is defined to use NADP+ as an acceptor, while 1.7.99.5 (assigned in many bacteria) is flexible with respect to the acceptor; both convert 5-methyltetrahydrofolate to 5,10-methylenetetrahydrofolate. From a larger set of proteins assigned as 1.5.1.20 and 1.7.99.5, this model describes the subset of proteins found in bacteria, and currently designated 1.7.99.5. This protein is an FAD-containing flavoprotein. [Amino acid biosynthesis, Aspartate family].	2.57702e-87
CP016327.1\|AUI73094.1\|281648_282902_-\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	1.38391e-161
CP016327.1\|AUI73088.1\|267016_267265_+\|hypothetical-protein	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	1.84691e-39
CP016327.1\|AUI73093.1\|278801_279662_+\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	2.02551e-141
CP016327.1\|AUI73077.1\|246851_248150_-\|glutamate/aspartate:proton-symporter-GltP	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	0
CP016327.1\|AUI73091.1\|271418_273116_+\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
CP016327.1\|AUI73086.1\|258107_259709_+\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP016327.1\|AUI73095.1\|282901_283954_-\|hypothetical-protein	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	1.42822e-34
CP016327.1\|AUI73084.1\|256804_257260_-\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	2.50812e-65
CP016327.1\|AUI73090.1\|268556_269939_+\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	4.12602e-171

>CP016327.1|AUI73086.1|258107_259709_+|glutamine--tRNA-ligase
MIKKNIIDYLSKDSKFRSLFKKKIITRFSPEPNGCLHLGHVKSIWVNCSLAKVLNGNCYIRFDDTNPIKENKIYITSVLEDIHWLGFKFKNINYASNYFNKLFEWALLLIKQGKAYIDDLSISEIKQYRGDFKSVGYNSPYRKRNIKDNIFFFKKMYKGFVKEGKKVLRAKIDMNSKNINLRDPIMYRIINVYHYRTGNYWKIYPSYDFTHGQSDMLEGITHSICTLEFETNRYLYQWFLKNIFNDYFKYPKQIEFSRMNISFSLTSKRKIKLLIDKNFIFGWDDPRLSTISGMRRRGYTPTSLKNLCKITGITRSNNNIDIHLQYYAIRSDLENKVIRVMCVINPIKLILTNLIVDYEEIITVKNHPFIEMGARSMYFNREIWIDLKDFNNKQNLFRLSKGKNVRLRHSYIIKCKKIVFLKNEQIKEIQGIVYLNSKHKNIEGKIFKGVIHWVSVKHSVPVLIRLYNSLLHKNIVNNNSLFFTDSIGEPIFSHIKPETRVQFERIGFFCADRYDFNQTNFVFNEIISLKTFI
>CP016327.1|AUI73085.1|257284_258130_+|shikimate-dehydrogenase
MEKKISCVFGKPIKHSMSPILHNSFGKKNNICLYYKAINIRNKILLKKEWIKFVICGGIGVNITIPYKQYAIKLANKLSYRAKIAGAVNTLIINKKNIFGDTTDGVGLIRDLNRLNINLLNKRILLLGAGGAVNSVIQQVLDLGPNKIYLVNRTLLKCKDIRNRFNLKNIIQFCSYDELKNKNAFDVIINGTSLSIKKDKINFNNNAFKTTIAYDLMYSKYITKFLKFAKNNNAKIYDGLGMLIEQAAETYFLLNNIRPKIKNLHKNIRNLLNNNDKKKYY
>CP016327.1|AUI73084.1|256804_257260_-|peptide-deformylase
MNILKYPDKRLKILAKPIKLINYKIRTLIFKMLNTMYAHNGIGLAATQINKHIRIFVMDISKNSNQPLIIINPKYIYVSTTYKKVKEGCLSIPNYFEYIYRSINIIIKAIDINGNKFIINASGLLSQCIQHEIDHLNGKLLIDNLSNKQKG
>CP016327.1|AUI73083.1|255827_256799_-|glucokinase
MNHLALVGDIGGTNVRLALALVSTNQLKLYKIKIFKCINYLNVYEVIKQYISLVGCDYPKQACLAFACPVNSNFIKMTNNSWTIAKYELKHKLNLQKLKIINDFTAIALGLTHIQAKDLYKLGYGKTNNNSNKILIGPGTGLGIAGLIHTKNSWIPFSGEGGHISFAPIDNFEVYILNWFQNNYKRVSIERILCGQGIVDLYYAHVNYYINHSYNVLTTPDAITKAALKKTDPLAYKTILMFCKLLGHVTGDMALTLGAKGGVYLCGGILPRIIKILDNSDFRNSFDNKGRMSFYNKEISTWLVKSKWIGLLGSADALFNNKL
>CP016327.1|AUI73082.1|254472_255831_+|glucose-6-phosphate-dehydrogenase
MKIIVKNITSLSLILFGALGDLALRKLYNSLFILYKKNIINKKINILCLARKVETLNTFRYTIYKRLIKANYINNKRDLVKLINFINCLYYLNIDFTTLTHFKFIKNQNLKNNLSKLVYFAVSSNIFKIICKYLNLNKQLTKTAKIILEKPIGCNLKSSININNYINNIYFERSIFRIDHYLGKRQVKNLLSLRFLNPVFYMLWNKKYITHIVINLAEHLGIEDRWGYFDKTGQLRDMVQNHLIQLLSMITICIPKTKQISVKNIYKEKIKILKDLNNSFLTVDIKYGQYISNKLKNKIFNGYLEEKNSNKNSSTETFIYIKTKINNFHWYGIPFFLMSGKRLKQKLSQIKIYLKKNSLNNDLNNKLIINLQPKEDINLNKFKIKQMSLNKNNYLDSYEFLILEVIKGKQDWFVSKEEIDYSWRWIEKVIHIWKQKNLPIFYYKSFTWGPIG
>CP016327.1|AUI73081.1|254196_254394_-|hypothetical-protein
MLNFFTHKPQYIKSTKRHNEQSTKPQHKLLIINKNKINIIAKTKIENKIYNIYHTTVTKLIPLKK
>CP016327.1|AUI73080.1|253385_253586_+|hypothetical-protein
MLLKFSLSSLLTSNLDALKLCKSFMASRFLFVEASHLGLAGINNMQKNKSIEGTIKSSNILLQFCK
>CP016327.1|AUI73079.1|252745_253276_-|hypothetical-protein
MNVLINFYGFTGTKPQLLSTLTVCLVNVLSTIVAIILVDKVGIKPILYFCFTIMAIGMALLSLILYTRTLHFIQFLSIFSLLIFVAGFAMSAGPIIWIICAEIQQVYGREFGISCSTIANWLANMLLGTFFLTILSKIGGPLTFSLLALANIAFIFFTIFVIPETKGISLEQIEKN
>CP016327.1|AUI73078.1|251878_252709_+|5,10-methylenetetrahydrofolate-reductase
MKKNEVEISFEMFPQKEHYKIKSFIKKIKQLYKKKDIKFCSITYGAGGSNKKNTLEIIKNIKKQKIECVPHLACITTKEKDLIKTLKSYKKIGIKKILALRGDIKTNTKTKFINSLDLLTLIKKNFYKNFEVIVTAYPEMHPNTISFEKEVCFVIKKFMFGANKAITQYFYDPDSYFYFVEKVRKYGVEKHIIPGIMPISNVNNLINFSKKCGANIPKWIYKKLEFCKTDNDIEHIGNDIVIKLCETLIKGGAPGLHFYTLNKLEPTLNILNSLIT
>CP016327.1|AUI73077.1|246851_248150_-|glutamate/aspartate:proton-symporter-GltP
MKIIQSKNLALKIIIGLCFGIITGLILHQNNYIKSWVLINVLQPLGEIFIRLIKMIVVPIILTSLIIGISGIDNTKNLSRIGLKTILYFELVTTLAIFVGLISANIFKPGYGINMSSLSNNIDLSQYKYFSNSIQKKEHTNILNIIVELIPSNIFQSFVTGNILSIIFFSVIFSLGLSGLPFKNKNLFINIIKTISETMFNVTSIIMRFSPIGVFSLISNTVANFGVLSLIPLIKLVVLVYFTIIFFIFIILGSIAWFFGFNILILLHILKDEILLAFTTSSSESVLLNLMAKMENYGAPKTICNFVIPTGYSFNLDGSTLYQSIAALFIAQLYGIKLTLFTQLTLILTLMITSKGIAGIPGVSFVVLLATLGSIGIPIEGIAFIAGVDRILDMARTVLNVVGNALAVLIVSKWENQYDTSKGLRYYKHKKV
>CP016327.1|AUI73087.1|261605_262967_+|cysteine--tRNA-ligase
MYIYNTLKKNKELLVPINLNKLKIYVCGSTVYDYCHIGHGRNMFIFYFFYKYLKHRGYILKYIRNITDIDKKIIKKSIKTNENTNILTQRIINSIHKDEKKLGLLAPDCEPKVSDYKNIIIYYINKLLKNDFAYIKKGNVFFKIKTHKLYGMLSNQTIKNLNFFLSKNFSKYKKYKLDFSLWKKSQYKFGWASPWSVGFPGWHIECSVLSKIYLGNKFDIHGGGLDLIFPHHENEKAQSELLFCKPHVNLWVHSGHLNVNNKKMSKSLHNTILVRYIIIKYNNEVINFFFLITHYRKSINFTIDQLDIVLNLLNHILYKIICITPKRQKYNNVFYNQIILALENDFNTVKAISILFNLLYKTKKAFKLGKIKKSQSLCFELIRLGKILGILKSLKKFKPQILFNINKVGSLILKRNIYKKETNFLQSDKLRISLTVFDIFIQDTIKRTFWLNR
>CP016327.1|AUI73088.1|267016_267265_+|hypothetical-protein
MAAIIKSGGNKGKRFCLQNARIMIHQPNVKKKGQASDIEIHTKEIISIKKKLNKILSQNTGQDIEKIKIDTDRNNFMDAKMA
>CP016327.1|AUI73089.1|267712_267958_+|Clp-protease
MFAETLALLLLVHFTIADATSLTEACYVGDDVEIIIQNLLQKCDYNIDKAQNCIVYIDEKIIKYVYYKRCYTTNVQKTRYK
>CP016327.1|AUI73090.1|268556_269939_+|cardiolipin-synthase
MKYIKTFLNIILFCFLLSSIIIALFMSRTPQSAIAWLISLITVPYFSIPMFWLLSCPNFCGYLIKKNSLHIKKFKNTFTINCNVQVVEKLSSMPLTQSNFVKLLINGYITFKSMFDGIKRAKKYILIQFFIIKNDKIGQEFKNSLIYSAKKGVNIFVIYDQIGSHNLSKSFIKEFKKAGINLFKFGFCKGWKNLLKINFCNHRKLILIDGKEAWIGGLNIGNEYLGINKQIGYWRDTHLHIIGPSVLCLQEIFLEDWFWSTDTKIHNLNWKPILSNIKNKHIIVVPSGPITNRNNASLLIQNSINIAKQRFWITSPYFIPDQSVIDSLKLAALRGVDVKIIIPERTDHLFVYLSTFSYFSELIRVGVKFYKYIKGFLHQKVMLIDNHTASVGTINLDNRSFRLNFEITAYIIDGDFAKDVKYMLQQDLLYCNLIHLNEINCRSLINKLLSKSAFLASPIQ
>CP016327.1|AUI73156.1|269971_271318_-|magnesium-transporter
MKKNNIIPNLWKALSNKNYKEIKSLLKYFRSADIAEMISRTSNKLIIQILNSQSSKRKADIFSYLPKDKQFEITKELNNEEIIKIFVKMNSDDSADVFNMFEPIRRENILRSMANKVRENLIKLSSYEDGTAGAIMTSNYVVIPENITVLQALNQIKQTAPDAETIYQIYVLDQDQKLTGTLSLRQIILANPIALIKDLMIKDVIYVHTNSKQEYVTKMISHYDFLAIPVINSEHKLVGIITYDDAMDVVERETTDDFHKSGSVGTLEYNIVRTNLLTLYSKRIFWLVLLIFGNLFSGAGIAKYEDTISSKISLVFFLPLLIGSGGNAGSQASTLMIRGLGTGEINIKDWAKLMSKELLVSGILGITMAIVIFPIGYIRGGIEVAYSVAISMIIIVIIGSLLGMSLPFCLNRLGFDPAAASAPLVATLCDSLGVLIFFSIATIILNVK
>CP016327.1|AUI73091.1|271418_273116_+|aspartate--tRNA-ligase
MRINYCGKVNQTFLNSYVKLYGWVNKIRDHGGILFLDLRDMYGRTQLVIDSKKLDFTNFVLAKKLKSEYIIKVIGLIKLRPVKDGFTNKIDIFVIELNLLSKSIKLPFKLYAKKKIKEEIRFKFRYIDLRQKKYIKKILIRSQIIHKIRSFLDINKFIEIETPILSNITVEGARTFIIQSHKQTFALPQSPQIYKQILMCSGLDRYYQIAKCFRDEDLRSDRQPEFTQIDIETSFMNKQAIINVVEKMIKSLFKELLHFTFSSAFKIIKYTDAINKYGTDKPDLRVPIKITDIEDVIPQSLTCIFLNKLQKLTSQCNRIAAIKLKGGVCLSLKQIIKYISFVKLYGAKGLIWIKVYNINLGLNGLQSPILKHITDEVIHNLKKRLHLKNGDLVFCCADTINIVNTSLSVLITQIANDLKLYIKAWAPIWVVNFPLFKRDIVGTLTSYHHPFTAPTSTLDEIIYNPEKAFANSFDLIINGIELGGGSIRINDYKLQKIIFKLLGLTQRTLNNNFGFFLKAFKFGVPPHGGLALGLDRIVMLLTKSDNIRDVIAFPKTNKFICPLSV
>CP016327.1|AUI73092.1|274425_274869_+|peptidoglycan-binding-protein
MIKKYMLKRLILAISLLLVLKNNNVILNEIKLNKFFIFNKAPFIKTIYFNYDLYYFSNKINNILKQYVIYIRNNPSKQLLLKINTNVLGNIKYNFILNKSRMSFIVNNLVLNGIHKNNIKYIICVKNKKVYNELNTLNNNKLIVNIL
>CP016327.1|AUI73093.1|278801_279662_+|lipoyl-synthase
MRHKPSWIKIRVPLYNEINNIKNKIRKTYLHTVCEESSCPNILNCFNEKIATIMILGNKCTRKCPFCDVLYGKTIKINYYEPFDIIKILIKLKINYIVITSVNRDDLEDGGANHFSKCIGAINRLYKHIKIEILIPDFRGKSDIAINILIKNKPTVLNHNIETIHNLYLQVKPGATYDISLNLLKQIKKYCPKIKTKSGLMVGIGENDKQLINVIKDIKTNQVDIITIGQYIAPSNFHLPIKRWVHPTSFYFYAKLCYILGFNYIASGPLIRSSYKAKNQNYGKNI
>CP016327.1|AUI73094.1|281648_282902_-|aspartate-kinase
MGIIVQKFGGTSVGSIKNIKNIAKQISFFYKKQHKIIVVVSAMSGETNRLLCLAKLMYKKKTINDIYNHRELDVLLSTGEQVTMSLLSIALNLVGVKSKSYTGAQLSIFTDSVYTKARIQHIDTSVINKDINNNIVVVVAGFQGIDKYGNITTLGRGGSDTTAVAISTAINADECQIYTDVSGVYSTDPRLCNNSSLISYITVEDMLELSSLGSKVLQIRSVEFAVKSNMPVRLLSIFDNNPGTLLIQKRSFLEKKMENPLISGVTYNCNIENITVIVSCEVFPYVCYNLLIFFSDHKIDICIQNIKNLTTQFVITFTISKSDYNLLFHTIQKYICIYLGGHILADNKSVIISIVGVGIYSHKCILHNVVYTLEKHGIIILFLSTSELKLSIFVFDDYMDLALHVLHTTLNLNNLVQ
>CP016327.1|AUI73095.1|282901_283954_-|hypothetical-protein
MIKHNSLFFHVGTLLKGYFSNTTHVKCYIDKIIRYNISVAHSAIHLLNVTIQRVAKNKLIKKGFFINQNKIIFEYKSYKPLTNKILFIIELLINRAIAKQHIILIKLLSKQKKNIKHKNVVVIGKEGGYSIDVCNGTHIKTTKNIGCFCIMSEQCVSKGIRRIEAVTNKNAVRYILKNKLTLKDLSFASNLCLNNVKKDIKHLKNKNKVLLDEFNLFKQITIQKQINKLLSKMFYFFGYKFLIYKIKSKYKKDLFVILHSIVNKLVNKSIIIVYVLNKHNINVFIKITNDCLKFRPYSVFFKQVLQTNKTIFYNATTNVSYLKTSINNLNMLYTKTLKTNIKTFLLKRGL

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Crispr_ID: CP016327_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP016327_5

260553-260657

Orphan

Consensus_repeat	Method
TAGTTGTTTAGTTATTAGAGTTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP016327_5

>merge|CP016327|5|260553-260657|CRISPRCasFinder
TAGTTGTTTTGTTTGTAGATTTTATAAAAATTATTGTTTGGTTGTTATAGAGGTTGATGTTTGTTGTAAGGTTATTAAAAATGGTTTGTTAGTTGTTAGAGCATA

>CP016327|5|5|260553-260657|CRISPRCasFinder
TAGTTGTTTTGTTTGTAGATTTTA	TAAAAATTATTGTTTGGTTGTTATAGAGGTTGATGTTTGTTGTAAGGTTATTAAAAA
TGGTTTGTTAGTTGTTAGAGCATA

Protein	Signature genes	Signature genes Name	Protein_function
CP016327.1\|AUI73089.1\|267712_267958_+\|Clp-protease	unknown	unknown	gnl\|CDD\|235422
CP016327.1\|AUI73088.1\|267016_267265_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178955
CP016327.1\|AUI73092.1\|274425_274869_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|274307
CP016327.1\|AUI73085.1\|257284_258130_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703
CP016327.1\|AUI73087.1\|261605_262967_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
CP016327.1\|AUI73079.1\|252745_253276_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340873
CP016327.1\|AUI73082.1\|254472_255831_+\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
CP016327.1\|AUI73156.1\|269971_271318_-\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
CP016327.1\|AUI73078.1\|251878_252709_+\|5,10-methylenetetrahydrofolate-reductase	unknown	unknown	gnl\|CDD\|273212
CP016327.1\|AUI73094.1\|281648_282902_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
CP016327.1\|AUI73084.1\|256804_257260_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
CP016327.1\|AUI73093.1\|278801_279662_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
CP016327.1\|AUI73083.1\|255827_256799_-\|glucokinase	unknown	unknown	gnl\|CDD\|234716
CP016327.1\|AUI73080.1\|253385_253586_+\|hypothetical-protein	unknown	unknown	unknown
CP016327.1\|AUI73091.1\|271418_273116_+\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
CP016327.1\|AUI73086.1\|258107_259709_+\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP016327.1\|AUI73095.1\|282901_283954_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234701
CP016327.1\|AUI73077.1\|246851_248150_-\|glutamate/aspartate:proton-symporter-GltP	unknown	unknown	gnl\|CDD\|183075
CP016327.1\|AUI73090.1\|268556_269939_+\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
CP016327.1\|AUI73081.1\|254196_254394_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP016327.1\|AUI73089.1\|267712_267958_+\|Clp-protease	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	2.21046e-29
CP016327.1\|AUI73092.1\|274425_274869_+\|peptidoglycan-binding-protein	gnl\|CDD\|274307	TIGR02802, Peptidoglycan-associated_lipoprotein, peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.	0.00287501
CP016327.1\|AUI73085.1\|257284_258130_+\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	5.97913e-83
CP016327.1\|AUI73087.1\|261605_262967_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	3.60454e-158
CP016327.1\|AUI73083.1\|255827_256799_-\|glucokinase	gnl\|CDD\|234716	PRK00292, glk, glucokinase; Provisional.	1.47784e-124
CP016327.1\|AUI73079.1\|252745_253276_-\|hypothetical-protein	gnl\|CDD\|340873	cd17315, MFS_GLUT_like, Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily. This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.12369e-31
CP016327.1\|AUI73082.1\|254472_255831_+\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	1.36646e-137
CP016327.1\|AUI73156.1\|269971_271318_-\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	1.09907e-125
CP016327.1\|AUI73078.1\|251878_252709_+\|5,10-methylenetetrahydrofolate-reductase	gnl\|CDD\|273212	TIGR00676, 510-methylenetetrahydrofolate_reductase., 5,10-methylenetetrahydrofolate reductase, prokaryotic form. The enzyme activities methylenetetrahydrofolate reductase (EC 1.5.1.20) and 5,10-methylenetetrahydrofolate reductase (FADH) (EC 1.7.99.5) differ in that 1.5.1.20 (assigned in many eukaryotes) is defined to use NADP+ as an acceptor, while 1.7.99.5 (assigned in many bacteria) is flexible with respect to the acceptor; both convert 5-methyltetrahydrofolate to 5,10-methylenetetrahydrofolate. From a larger set of proteins assigned as 1.5.1.20 and 1.7.99.5, this model describes the subset of proteins found in bacteria, and currently designated 1.7.99.5. This protein is an FAD-containing flavoprotein. [Amino acid biosynthesis, Aspartate family].	2.57702e-87
CP016327.1\|AUI73094.1\|281648_282902_-\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	1.38391e-161
CP016327.1\|AUI73088.1\|267016_267265_+\|hypothetical-protein	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	1.84691e-39
CP016327.1\|AUI73093.1\|278801_279662_+\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	2.02551e-141
CP016327.1\|AUI73077.1\|246851_248150_-\|glutamate/aspartate:proton-symporter-GltP	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	0
CP016327.1\|AUI73091.1\|271418_273116_+\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
CP016327.1\|AUI73086.1\|258107_259709_+\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP016327.1\|AUI73095.1\|282901_283954_-\|hypothetical-protein	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	1.42822e-34
CP016327.1\|AUI73084.1\|256804_257260_-\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	2.50812e-65
CP016327.1\|AUI73090.1\|268556_269939_+\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	4.12602e-171

>CP016327.1|AUI73086.1|258107_259709_+|glutamine--tRNA-ligase
MIKKNIIDYLSKDSKFRSLFKKKIITRFSPEPNGCLHLGHVKSIWVNCSLAKVLNGNCYIRFDDTNPIKENKIYITSVLEDIHWLGFKFKNINYASNYFNKLFEWALLLIKQGKAYIDDLSISEIKQYRGDFKSVGYNSPYRKRNIKDNIFFFKKMYKGFVKEGKKVLRAKIDMNSKNINLRDPIMYRIINVYHYRTGNYWKIYPSYDFTHGQSDMLEGITHSICTLEFETNRYLYQWFLKNIFNDYFKYPKQIEFSRMNISFSLTSKRKIKLLIDKNFIFGWDDPRLSTISGMRRRGYTPTSLKNLCKITGITRSNNNIDIHLQYYAIRSDLENKVIRVMCVINPIKLILTNLIVDYEEIITVKNHPFIEMGARSMYFNREIWIDLKDFNNKQNLFRLSKGKNVRLRHSYIIKCKKIVFLKNEQIKEIQGIVYLNSKHKNIEGKIFKGVIHWVSVKHSVPVLIRLYNSLLHKNIVNNNSLFFTDSIGEPIFSHIKPETRVQFERIGFFCADRYDFNQTNFVFNEIISLKTFI
>CP016327.1|AUI73085.1|257284_258130_+|shikimate-dehydrogenase
MEKKISCVFGKPIKHSMSPILHNSFGKKNNICLYYKAINIRNKILLKKEWIKFVICGGIGVNITIPYKQYAIKLANKLSYRAKIAGAVNTLIINKKNIFGDTTDGVGLIRDLNRLNINLLNKRILLLGAGGAVNSVIQQVLDLGPNKIYLVNRTLLKCKDIRNRFNLKNIIQFCSYDELKNKNAFDVIINGTSLSIKKDKINFNNNAFKTTIAYDLMYSKYITKFLKFAKNNNAKIYDGLGMLIEQAAETYFLLNNIRPKIKNLHKNIRNLLNNNDKKKYY
>CP016327.1|AUI73084.1|256804_257260_-|peptide-deformylase
MNILKYPDKRLKILAKPIKLINYKIRTLIFKMLNTMYAHNGIGLAATQINKHIRIFVMDISKNSNQPLIIINPKYIYVSTTYKKVKEGCLSIPNYFEYIYRSINIIIKAIDINGNKFIINASGLLSQCIQHEIDHLNGKLLIDNLSNKQKG
>CP016327.1|AUI73083.1|255827_256799_-|glucokinase
MNHLALVGDIGGTNVRLALALVSTNQLKLYKIKIFKCINYLNVYEVIKQYISLVGCDYPKQACLAFACPVNSNFIKMTNNSWTIAKYELKHKLNLQKLKIINDFTAIALGLTHIQAKDLYKLGYGKTNNNSNKILIGPGTGLGIAGLIHTKNSWIPFSGEGGHISFAPIDNFEVYILNWFQNNYKRVSIERILCGQGIVDLYYAHVNYYINHSYNVLTTPDAITKAALKKTDPLAYKTILMFCKLLGHVTGDMALTLGAKGGVYLCGGILPRIIKILDNSDFRNSFDNKGRMSFYNKEISTWLVKSKWIGLLGSADALFNNKL
>CP016327.1|AUI73082.1|254472_255831_+|glucose-6-phosphate-dehydrogenase
MKIIVKNITSLSLILFGALGDLALRKLYNSLFILYKKNIINKKINILCLARKVETLNTFRYTIYKRLIKANYINNKRDLVKLINFINCLYYLNIDFTTLTHFKFIKNQNLKNNLSKLVYFAVSSNIFKIICKYLNLNKQLTKTAKIILEKPIGCNLKSSININNYINNIYFERSIFRIDHYLGKRQVKNLLSLRFLNPVFYMLWNKKYITHIVINLAEHLGIEDRWGYFDKTGQLRDMVQNHLIQLLSMITICIPKTKQISVKNIYKEKIKILKDLNNSFLTVDIKYGQYISNKLKNKIFNGYLEEKNSNKNSSTETFIYIKTKINNFHWYGIPFFLMSGKRLKQKLSQIKIYLKKNSLNNDLNNKLIINLQPKEDINLNKFKIKQMSLNKNNYLDSYEFLILEVIKGKQDWFVSKEEIDYSWRWIEKVIHIWKQKNLPIFYYKSFTWGPIG
>CP016327.1|AUI73081.1|254196_254394_-|hypothetical-protein
MLNFFTHKPQYIKSTKRHNEQSTKPQHKLLIINKNKINIIAKTKIENKIYNIYHTTVTKLIPLKK
>CP016327.1|AUI73080.1|253385_253586_+|hypothetical-protein
MLLKFSLSSLLTSNLDALKLCKSFMASRFLFVEASHLGLAGINNMQKNKSIEGTIKSSNILLQFCK
>CP016327.1|AUI73079.1|252745_253276_-|hypothetical-protein
MNVLINFYGFTGTKPQLLSTLTVCLVNVLSTIVAIILVDKVGIKPILYFCFTIMAIGMALLSLILYTRTLHFIQFLSIFSLLIFVAGFAMSAGPIIWIICAEIQQVYGREFGISCSTIANWLANMLLGTFFLTILSKIGGPLTFSLLALANIAFIFFTIFVIPETKGISLEQIEKN
>CP016327.1|AUI73078.1|251878_252709_+|5,10-methylenetetrahydrofolate-reductase
MKKNEVEISFEMFPQKEHYKIKSFIKKIKQLYKKKDIKFCSITYGAGGSNKKNTLEIIKNIKKQKIECVPHLACITTKEKDLIKTLKSYKKIGIKKILALRGDIKTNTKTKFINSLDLLTLIKKNFYKNFEVIVTAYPEMHPNTISFEKEVCFVIKKFMFGANKAITQYFYDPDSYFYFVEKVRKYGVEKHIIPGIMPISNVNNLINFSKKCGANIPKWIYKKLEFCKTDNDIEHIGNDIVIKLCETLIKGGAPGLHFYTLNKLEPTLNILNSLIT
>CP016327.1|AUI73077.1|246851_248150_-|glutamate/aspartate:proton-symporter-GltP
MKIIQSKNLALKIIIGLCFGIITGLILHQNNYIKSWVLINVLQPLGEIFIRLIKMIVVPIILTSLIIGISGIDNTKNLSRIGLKTILYFELVTTLAIFVGLISANIFKPGYGINMSSLSNNIDLSQYKYFSNSIQKKEHTNILNIIVELIPSNIFQSFVTGNILSIIFFSVIFSLGLSGLPFKNKNLFINIIKTISETMFNVTSIIMRFSPIGVFSLISNTVANFGVLSLIPLIKLVVLVYFTIIFFIFIILGSIAWFFGFNILILLHILKDEILLAFTTSSSESVLLNLMAKMENYGAPKTICNFVIPTGYSFNLDGSTLYQSIAALFIAQLYGIKLTLFTQLTLILTLMITSKGIAGIPGVSFVVLLATLGSIGIPIEGIAFIAGVDRILDMARTVLNVVGNALAVLIVSKWENQYDTSKGLRYYKHKKV
>CP016327.1|AUI73087.1|261605_262967_+|cysteine--tRNA-ligase
MYIYNTLKKNKELLVPINLNKLKIYVCGSTVYDYCHIGHGRNMFIFYFFYKYLKHRGYILKYIRNITDIDKKIIKKSIKTNENTNILTQRIINSIHKDEKKLGLLAPDCEPKVSDYKNIIIYYINKLLKNDFAYIKKGNVFFKIKTHKLYGMLSNQTIKNLNFFLSKNFSKYKKYKLDFSLWKKSQYKFGWASPWSVGFPGWHIECSVLSKIYLGNKFDIHGGGLDLIFPHHENEKAQSELLFCKPHVNLWVHSGHLNVNNKKMSKSLHNTILVRYIIIKYNNEVINFFFLITHYRKSINFTIDQLDIVLNLLNHILYKIICITPKRQKYNNVFYNQIILALENDFNTVKAISILFNLLYKTKKAFKLGKIKKSQSLCFELIRLGKILGILKSLKKFKPQILFNINKVGSLILKRNIYKKETNFLQSDKLRISLTVFDIFIQDTIKRTFWLNR
>CP016327.1|AUI73088.1|267016_267265_+|hypothetical-protein
MAAIIKSGGNKGKRFCLQNARIMIHQPNVKKKGQASDIEIHTKEIISIKKKLNKILSQNTGQDIEKIKIDTDRNNFMDAKMA
>CP016327.1|AUI73089.1|267712_267958_+|Clp-protease
MFAETLALLLLVHFTIADATSLTEACYVGDDVEIIIQNLLQKCDYNIDKAQNCIVYIDEKIIKYVYYKRCYTTNVQKTRYK
>CP016327.1|AUI73090.1|268556_269939_+|cardiolipin-synthase
MKYIKTFLNIILFCFLLSSIIIALFMSRTPQSAIAWLISLITVPYFSIPMFWLLSCPNFCGYLIKKNSLHIKKFKNTFTINCNVQVVEKLSSMPLTQSNFVKLLINGYITFKSMFDGIKRAKKYILIQFFIIKNDKIGQEFKNSLIYSAKKGVNIFVIYDQIGSHNLSKSFIKEFKKAGINLFKFGFCKGWKNLLKINFCNHRKLILIDGKEAWIGGLNIGNEYLGINKQIGYWRDTHLHIIGPSVLCLQEIFLEDWFWSTDTKIHNLNWKPILSNIKNKHIIVVPSGPITNRNNASLLIQNSINIAKQRFWITSPYFIPDQSVIDSLKLAALRGVDVKIIIPERTDHLFVYLSTFSYFSELIRVGVKFYKYIKGFLHQKVMLIDNHTASVGTINLDNRSFRLNFEITAYIIDGDFAKDVKYMLQQDLLYCNLIHLNEINCRSLINKLLSKSAFLASPIQ
>CP016327.1|AUI73156.1|269971_271318_-|magnesium-transporter
MKKNNIIPNLWKALSNKNYKEIKSLLKYFRSADIAEMISRTSNKLIIQILNSQSSKRKADIFSYLPKDKQFEITKELNNEEIIKIFVKMNSDDSADVFNMFEPIRRENILRSMANKVRENLIKLSSYEDGTAGAIMTSNYVVIPENITVLQALNQIKQTAPDAETIYQIYVLDQDQKLTGTLSLRQIILANPIALIKDLMIKDVIYVHTNSKQEYVTKMISHYDFLAIPVINSEHKLVGIITYDDAMDVVERETTDDFHKSGSVGTLEYNIVRTNLLTLYSKRIFWLVLLIFGNLFSGAGIAKYEDTISSKISLVFFLPLLIGSGGNAGSQASTLMIRGLGTGEINIKDWAKLMSKELLVSGILGITMAIVIFPIGYIRGGIEVAYSVAISMIIIVIIGSLLGMSLPFCLNRLGFDPAAASAPLVATLCDSLGVLIFFSIATIILNVK
>CP016327.1|AUI73091.1|271418_273116_+|aspartate--tRNA-ligase
MRINYCGKVNQTFLNSYVKLYGWVNKIRDHGGILFLDLRDMYGRTQLVIDSKKLDFTNFVLAKKLKSEYIIKVIGLIKLRPVKDGFTNKIDIFVIELNLLSKSIKLPFKLYAKKKIKEEIRFKFRYIDLRQKKYIKKILIRSQIIHKIRSFLDINKFIEIETPILSNITVEGARTFIIQSHKQTFALPQSPQIYKQILMCSGLDRYYQIAKCFRDEDLRSDRQPEFTQIDIETSFMNKQAIINVVEKMIKSLFKELLHFTFSSAFKIIKYTDAINKYGTDKPDLRVPIKITDIEDVIPQSLTCIFLNKLQKLTSQCNRIAAIKLKGGVCLSLKQIIKYISFVKLYGAKGLIWIKVYNINLGLNGLQSPILKHITDEVIHNLKKRLHLKNGDLVFCCADTINIVNTSLSVLITQIANDLKLYIKAWAPIWVVNFPLFKRDIVGTLTSYHHPFTAPTSTLDEIIYNPEKAFANSFDLIINGIELGGGSIRINDYKLQKIIFKLLGLTQRTLNNNFGFFLKAFKFGVPPHGGLALGLDRIVMLLTKSDNIRDVIAFPKTNKFICPLSV
>CP016327.1|AUI73092.1|274425_274869_+|peptidoglycan-binding-protein
MIKKYMLKRLILAISLLLVLKNNNVILNEIKLNKFFIFNKAPFIKTIYFNYDLYYFSNKINNILKQYVIYIRNNPSKQLLLKINTNVLGNIKYNFILNKSRMSFIVNNLVLNGIHKNNIKYIICVKNKKVYNELNTLNNNKLIVNIL
>CP016327.1|AUI73093.1|278801_279662_+|lipoyl-synthase
MRHKPSWIKIRVPLYNEINNIKNKIRKTYLHTVCEESSCPNILNCFNEKIATIMILGNKCTRKCPFCDVLYGKTIKINYYEPFDIIKILIKLKINYIVITSVNRDDLEDGGANHFSKCIGAINRLYKHIKIEILIPDFRGKSDIAINILIKNKPTVLNHNIETIHNLYLQVKPGATYDISLNLLKQIKKYCPKIKTKSGLMVGIGENDKQLINVIKDIKTNQVDIITIGQYIAPSNFHLPIKRWVHPTSFYFYAKLCYILGFNYIASGPLIRSSYKAKNQNYGKNI
>CP016327.1|AUI73094.1|281648_282902_-|aspartate-kinase
MGIIVQKFGGTSVGSIKNIKNIAKQISFFYKKQHKIIVVVSAMSGETNRLLCLAKLMYKKKTINDIYNHRELDVLLSTGEQVTMSLLSIALNLVGVKSKSYTGAQLSIFTDSVYTKARIQHIDTSVINKDINNNIVVVVAGFQGIDKYGNITTLGRGGSDTTAVAISTAINADECQIYTDVSGVYSTDPRLCNNSSLISYITVEDMLELSSLGSKVLQIRSVEFAVKSNMPVRLLSIFDNNPGTLLIQKRSFLEKKMENPLISGVTYNCNIENITVIVSCEVFPYVCYNLLIFFSDHKIDICIQNIKNLTTQFVITFTISKSDYNLLFHTIQKYICIYLGGHILADNKSVIISIVGVGIYSHKCILHNVVYTLEKHGIIILFLSTSELKLSIFVFDDYMDLALHVLHTTLNLNNLVQ
>CP016327.1|AUI73095.1|282901_283954_-|hypothetical-protein
MIKHNSLFFHVGTLLKGYFSNTTHVKCYIDKIIRYNISVAHSAIHLLNVTIQRVAKNKLIKKGFFINQNKIIFEYKSYKPLTNKILFIIELLINRAIAKQHIILIKLLSKQKKNIKHKNVVVIGKEGGYSIDVCNGTHIKTTKNIGCFCIMSEQCVSKGIRRIEAVTNKNAVRYILKNKLTLKDLSFASNLCLNNVKKDIKHLKNKNKVLLDEFNLFKQITIQKQINKLLSKMFYFFGYKFLIYKIKSKYKKDLFVILHSIVNKLVNKSIIIVYVLNKHNINVFIKITNDCLKFRPYSVFFKQVLQTNKTIFYNATTNVSYLKTSINNLNMLYTKTLKTNIKTFLLKRGL

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Crispr_ID: CP016327_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP016327_6

277403-277484

Orphan

Consensus_repeat	Method
CATCTATTTTCTAAAATCAATTACTAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP016327_6

>merge|CP016327|6|277403-277484|CRISPRCasFinder
CATCTATTTTCTAAAATCAATTACTAACAAGTAACAACAACAAACCTCTTCTAACATCTATTCTCTAAAATCAATTACTAAC

>CP016327|6|6|277403-277484|CRISPRCasFinder
CATCTATTTTCTAAAATCAATTACTAAC	AAGTAACAACAACAAACCTCTTCTAA
CATCTATTCTCTAAAATCAATTACTAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP016327.1\|AUI73089.1\|267712_267958_+\|Clp-protease	unknown	unknown	gnl\|CDD\|235422
CP016327.1\|AUI73101.1\|293734_294298_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789
CP016327.1\|AUI73092.1\|274425_274869_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|274307
CP016327.1\|AUI73097.1\|288080_288557_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|237573
CP016327.1\|AUI73085.1\|257284_258130_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703
CP016327.1\|AUI73156.1\|269971_271318_-\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
CP016327.1\|AUI73086.1\|258107_259709_+\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP016327.1\|AUI73093.1\|278801_279662_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
CP016327.1\|AUI73087.1\|261605_262967_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
CP016327.1\|AUI73100.1\|293543_293732_-\|ferredoxin	unknown	unknown	gnl\|CDD\|224066
CP016327.1\|AUI73088.1\|267016_267265_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178955
CP016327.1\|AUI73098.1\|291553_292735_+\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
CP016327.1\|AUI73102.1\|295045_297694_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
CP016327.1\|AUI73091.1\|271418_273116_+\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
CP016327.1\|AUI73094.1\|281648_282902_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
CP016327.1\|AUI73095.1\|282901_283954_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234701
CP016327.1\|AUI73084.1\|256804_257260_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
CP016327.1\|AUI73090.1\|268556_269939_+\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
CP016327.1\|AUI73099.1\|292740_293547_+\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
CP016327.1\|AUI73096.1\|285492_288084_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743

Protein	Function_ID	Function_description	E-value
CP016327.1\|AUI73089.1\|267712_267958_+\|Clp-protease	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	2.21046e-29
CP016327.1\|AUI73101.1\|293734_294298_-\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	3.10726e-111
CP016327.1\|AUI73092.1\|274425_274869_+\|peptidoglycan-binding-protein	gnl\|CDD\|274307	TIGR02802, Peptidoglycan-associated_lipoprotein, peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.	0.00287501
CP016327.1\|AUI73097.1\|288080_288557_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|237573	PRK13963, PRK13963, rRNA maturation RNase YbeY.	9.16607e-24
CP016327.1\|AUI73085.1\|257284_258130_+\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	5.97913e-83
CP016327.1\|AUI73156.1\|269971_271318_-\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	1.09907e-125
CP016327.1\|AUI73086.1\|258107_259709_+\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP016327.1\|AUI73093.1\|278801_279662_+\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	2.02551e-141
CP016327.1\|AUI73087.1\|261605_262967_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	3.60454e-158
CP016327.1\|AUI73100.1\|293543_293732_-\|ferredoxin	gnl\|CDD\|224066	COG1143, NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion].	2.20945e-05
CP016327.1\|AUI73088.1\|267016_267265_+\|hypothetical-protein	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	1.84691e-39
CP016327.1\|AUI73098.1\|291553_292735_+\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
CP016327.1\|AUI73102.1\|295045_297694_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
CP016327.1\|AUI73091.1\|271418_273116_+\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
CP016327.1\|AUI73094.1\|281648_282902_-\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	1.38391e-161
CP016327.1\|AUI73095.1\|282901_283954_-\|hypothetical-protein	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	1.42822e-34
CP016327.1\|AUI73084.1\|256804_257260_-\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	2.50812e-65
CP016327.1\|AUI73090.1\|268556_269939_+\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	4.12602e-171
CP016327.1\|AUI73099.1\|292740_293547_+\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	4.1465e-115
CP016327.1\|AUI73096.1\|285492_288084_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0

>CP016327.1|AUI73092.1|274425_274869_+|peptidoglycan-binding-protein
MIKKYMLKRLILAISLLLVLKNNNVILNEIKLNKFFIFNKAPFIKTIYFNYDLYYFSNKINNILKQYVIYIRNNPSKQLLLKINTNVLGNIKYNFILNKSRMSFIVNNLVLNGIHKNNIKYIICVKNKKVYNELNTLNNNKLIVNIL
>CP016327.1|AUI73091.1|271418_273116_+|aspartate--tRNA-ligase
MRINYCGKVNQTFLNSYVKLYGWVNKIRDHGGILFLDLRDMYGRTQLVIDSKKLDFTNFVLAKKLKSEYIIKVIGLIKLRPVKDGFTNKIDIFVIELNLLSKSIKLPFKLYAKKKIKEEIRFKFRYIDLRQKKYIKKILIRSQIIHKIRSFLDINKFIEIETPILSNITVEGARTFIIQSHKQTFALPQSPQIYKQILMCSGLDRYYQIAKCFRDEDLRSDRQPEFTQIDIETSFMNKQAIINVVEKMIKSLFKELLHFTFSSAFKIIKYTDAINKYGTDKPDLRVPIKITDIEDVIPQSLTCIFLNKLQKLTSQCNRIAAIKLKGGVCLSLKQIIKYISFVKLYGAKGLIWIKVYNINLGLNGLQSPILKHITDEVIHNLKKRLHLKNGDLVFCCADTINIVNTSLSVLITQIANDLKLYIKAWAPIWVVNFPLFKRDIVGTLTSYHHPFTAPTSTLDEIIYNPEKAFANSFDLIINGIELGGGSIRINDYKLQKIIFKLLGLTQRTLNNNFGFFLKAFKFGVPPHGGLALGLDRIVMLLTKSDNIRDVIAFPKTNKFICPLSV
>CP016327.1|AUI73156.1|269971_271318_-|magnesium-transporter
MKKNNIIPNLWKALSNKNYKEIKSLLKYFRSADIAEMISRTSNKLIIQILNSQSSKRKADIFSYLPKDKQFEITKELNNEEIIKIFVKMNSDDSADVFNMFEPIRRENILRSMANKVRENLIKLSSYEDGTAGAIMTSNYVVIPENITVLQALNQIKQTAPDAETIYQIYVLDQDQKLTGTLSLRQIILANPIALIKDLMIKDVIYVHTNSKQEYVTKMISHYDFLAIPVINSEHKLVGIITYDDAMDVVERETTDDFHKSGSVGTLEYNIVRTNLLTLYSKRIFWLVLLIFGNLFSGAGIAKYEDTISSKISLVFFLPLLIGSGGNAGSQASTLMIRGLGTGEINIKDWAKLMSKELLVSGILGITMAIVIFPIGYIRGGIEVAYSVAISMIIIVIIGSLLGMSLPFCLNRLGFDPAAASAPLVATLCDSLGVLIFFSIATIILNVK
>CP016327.1|AUI73090.1|268556_269939_+|cardiolipin-synthase
MKYIKTFLNIILFCFLLSSIIIALFMSRTPQSAIAWLISLITVPYFSIPMFWLLSCPNFCGYLIKKNSLHIKKFKNTFTINCNVQVVEKLSSMPLTQSNFVKLLINGYITFKSMFDGIKRAKKYILIQFFIIKNDKIGQEFKNSLIYSAKKGVNIFVIYDQIGSHNLSKSFIKEFKKAGINLFKFGFCKGWKNLLKINFCNHRKLILIDGKEAWIGGLNIGNEYLGINKQIGYWRDTHLHIIGPSVLCLQEIFLEDWFWSTDTKIHNLNWKPILSNIKNKHIIVVPSGPITNRNNASLLIQNSINIAKQRFWITSPYFIPDQSVIDSLKLAALRGVDVKIIIPERTDHLFVYLSTFSYFSELIRVGVKFYKYIKGFLHQKVMLIDNHTASVGTINLDNRSFRLNFEITAYIIDGDFAKDVKYMLQQDLLYCNLIHLNEINCRSLINKLLSKSAFLASPIQ
>CP016327.1|AUI73089.1|267712_267958_+|Clp-protease
MFAETLALLLLVHFTIADATSLTEACYVGDDVEIIIQNLLQKCDYNIDKAQNCIVYIDEKIIKYVYYKRCYTTNVQKTRYK
>CP016327.1|AUI73088.1|267016_267265_+|hypothetical-protein
MAAIIKSGGNKGKRFCLQNARIMIHQPNVKKKGQASDIEIHTKEIISIKKKLNKILSQNTGQDIEKIKIDTDRNNFMDAKMA
>CP016327.1|AUI73087.1|261605_262967_+|cysteine--tRNA-ligase
MYIYNTLKKNKELLVPINLNKLKIYVCGSTVYDYCHIGHGRNMFIFYFFYKYLKHRGYILKYIRNITDIDKKIIKKSIKTNENTNILTQRIINSIHKDEKKLGLLAPDCEPKVSDYKNIIIYYINKLLKNDFAYIKKGNVFFKIKTHKLYGMLSNQTIKNLNFFLSKNFSKYKKYKLDFSLWKKSQYKFGWASPWSVGFPGWHIECSVLSKIYLGNKFDIHGGGLDLIFPHHENEKAQSELLFCKPHVNLWVHSGHLNVNNKKMSKSLHNTILVRYIIIKYNNEVINFFFLITHYRKSINFTIDQLDIVLNLLNHILYKIICITPKRQKYNNVFYNQIILALENDFNTVKAISILFNLLYKTKKAFKLGKIKKSQSLCFELIRLGKILGILKSLKKFKPQILFNINKVGSLILKRNIYKKETNFLQSDKLRISLTVFDIFIQDTIKRTFWLNR
>CP016327.1|AUI73086.1|258107_259709_+|glutamine--tRNA-ligase
MIKKNIIDYLSKDSKFRSLFKKKIITRFSPEPNGCLHLGHVKSIWVNCSLAKVLNGNCYIRFDDTNPIKENKIYITSVLEDIHWLGFKFKNINYASNYFNKLFEWALLLIKQGKAYIDDLSISEIKQYRGDFKSVGYNSPYRKRNIKDNIFFFKKMYKGFVKEGKKVLRAKIDMNSKNINLRDPIMYRIINVYHYRTGNYWKIYPSYDFTHGQSDMLEGITHSICTLEFETNRYLYQWFLKNIFNDYFKYPKQIEFSRMNISFSLTSKRKIKLLIDKNFIFGWDDPRLSTISGMRRRGYTPTSLKNLCKITGITRSNNNIDIHLQYYAIRSDLENKVIRVMCVINPIKLILTNLIVDYEEIITVKNHPFIEMGARSMYFNREIWIDLKDFNNKQNLFRLSKGKNVRLRHSYIIKCKKIVFLKNEQIKEIQGIVYLNSKHKNIEGKIFKGVIHWVSVKHSVPVLIRLYNSLLHKNIVNNNSLFFTDSIGEPIFSHIKPETRVQFERIGFFCADRYDFNQTNFVFNEIISLKTFI
>CP016327.1|AUI73085.1|257284_258130_+|shikimate-dehydrogenase
MEKKISCVFGKPIKHSMSPILHNSFGKKNNICLYYKAINIRNKILLKKEWIKFVICGGIGVNITIPYKQYAIKLANKLSYRAKIAGAVNTLIINKKNIFGDTTDGVGLIRDLNRLNINLLNKRILLLGAGGAVNSVIQQVLDLGPNKIYLVNRTLLKCKDIRNRFNLKNIIQFCSYDELKNKNAFDVIINGTSLSIKKDKINFNNNAFKTTIAYDLMYSKYITKFLKFAKNNNAKIYDGLGMLIEQAAETYFLLNNIRPKIKNLHKNIRNLLNNNDKKKYY
>CP016327.1|AUI73084.1|256804_257260_-|peptide-deformylase
MNILKYPDKRLKILAKPIKLINYKIRTLIFKMLNTMYAHNGIGLAATQINKHIRIFVMDISKNSNQPLIIINPKYIYVSTTYKKVKEGCLSIPNYFEYIYRSINIIIKAIDINGNKFIINASGLLSQCIQHEIDHLNGKLLIDNLSNKQKG
>CP016327.1|AUI73093.1|278801_279662_+|lipoyl-synthase
MRHKPSWIKIRVPLYNEINNIKNKIRKTYLHTVCEESSCPNILNCFNEKIATIMILGNKCTRKCPFCDVLYGKTIKINYYEPFDIIKILIKLKINYIVITSVNRDDLEDGGANHFSKCIGAINRLYKHIKIEILIPDFRGKSDIAINILIKNKPTVLNHNIETIHNLYLQVKPGATYDISLNLLKQIKKYCPKIKTKSGLMVGIGENDKQLINVIKDIKTNQVDIITIGQYIAPSNFHLPIKRWVHPTSFYFYAKLCYILGFNYIASGPLIRSSYKAKNQNYGKNI
>CP016327.1|AUI73094.1|281648_282902_-|aspartate-kinase
MGIIVQKFGGTSVGSIKNIKNIAKQISFFYKKQHKIIVVVSAMSGETNRLLCLAKLMYKKKTINDIYNHRELDVLLSTGEQVTMSLLSIALNLVGVKSKSYTGAQLSIFTDSVYTKARIQHIDTSVINKDINNNIVVVVAGFQGIDKYGNITTLGRGGSDTTAVAISTAINADECQIYTDVSGVYSTDPRLCNNSSLISYITVEDMLELSSLGSKVLQIRSVEFAVKSNMPVRLLSIFDNNPGTLLIQKRSFLEKKMENPLISGVTYNCNIENITVIVSCEVFPYVCYNLLIFFSDHKIDICIQNIKNLTTQFVITFTISKSDYNLLFHTIQKYICIYLGGHILADNKSVIISIVGVGIYSHKCILHNVVYTLEKHGIIILFLSTSELKLSIFVFDDYMDLALHVLHTTLNLNNLVQ
>CP016327.1|AUI73095.1|282901_283954_-|hypothetical-protein
MIKHNSLFFHVGTLLKGYFSNTTHVKCYIDKIIRYNISVAHSAIHLLNVTIQRVAKNKLIKKGFFINQNKIIFEYKSYKPLTNKILFIIELLINRAIAKQHIILIKLLSKQKKNIKHKNVVVIGKEGGYSIDVCNGTHIKTTKNIGCFCIMSEQCVSKGIRRIEAVTNKNAVRYILKNKLTLKDLSFASNLCLNNVKKDIKHLKNKNKVLLDEFNLFKQITIQKQINKLLSKMFYFFGYKFLIYKIKSKYKKDLFVILHSIVNKLVNKSIIIVYVLNKHNINVFIKITNDCLKFRPYSVFFKQVLQTNKTIFYNATTNVSYLKTSINNLNMLYTKTLKTNIKTFLLKRGL
>CP016327.1|AUI73096.1|285492_288084_-|leucine--tRNA-ligase
MMYPFYYKQIELEAQNFWYNHNCFEIVEIPNKEKFYCLCMFPYPSGNLHIGHVRNYTIGDVISRSQRMLGKNVLNPIGWDAFGMPAENAAKKNIVSPTDWTYSNIYYMYNQLKSLGFSYNWDRKITTCKIDFYRWEQWFFIKLIEHGVIYKNNAIINWDPLEKTILANEQVINGIGWRSGAKIEHRKIPSWFLKITDYAYELLRCLANIDWPESVKKMQVNWIGKYKGIEVSFKVIGSVPNCYSYLKVFTQRPDTLFGVTYIRLAPDHHLVELAAQYNYQIKKLCNTFKLCGKCSLAILKNKELGLYVGYNVLHPITNEILPLYVSSFRYFEYGATASMGVPAHSHRDWDFANTYGLPFKTVVSDINGKVPDISKNAYTDFGFIINSGIFNNITCFEAFDYIFSFIKQSKSGVVKQKLKLRDWGISRQRYWGTPIPVKYGITGKPTPLTDEEIPVYLPKHVCLNSKFNLKKIPSFYVLGNGWVRDTETFDTFIESSWYYARFCCTDNKNSILDARVNYWLPVDMYIGGIEHAILHLMYARFFHKLMRDFGLVDCDEPFKKLITQGMVLTYTYYRESFGIKEWFNPLDVCLLKEKKNGNIIPTVKRDGGIVIRNGIEKMSKSKNNGIDPNVLINRFGADTLRLFVMFSAPTEQVLIWSESGIIGSSRFIKRLWNIVHTYIYISGSEHTIIKLSSLRPDQFNLYRQLQKTIKKATSDMIGRHVFNTVISTVMKLTNLVSHFIDIDSSIIGLAVTREALKSIILILAPIVPHITHVLWKVLGFSYAVIDAKWPSYNKHCMLGHLFTVLAQINGKIRKEIKLPLNYHTKTFASTILSSISTKCYLNCKEIHTLIFVYAKVINIVVSL
>CP016327.1|AUI73097.1|288080_288557_-|rRNA-maturation-RNase-YbeY
MKKKIKCVYVHMQFIKNNTIKKIVPNESLLSSWFNSFLKPKYKPYKDIVFNIRFVEYKEIIGLNSYYRGFNSLTNIISFSYEALSQRINIQLLGELVITPTLLLYESFKMNKAFIAHCAHIIVHGLLHLIGYNHKNVTDAANMENIEYSNLNKTNIHL
>CP016327.1|AUI73098.1|291553_292735_+|tryptophan-synthase-subunit-beta
MNIIPNHKGLFGNFGGRFVSETLIPLIIELEKTYKTAKKDESFRKELAYYQKTYIGRSSPLYLADRLTQALGGAKIYFKREDLNHTGAHKINNCIGQILLAKRLGKNRIIAETGAGMHGVATATVAARFGMKCVIYMGSTDVKRQKENVYRMKLLGAKVVPVNSGKGTLKDAMNEALRDWVNNIETTFYIIGTVAGPHPYPLIVRDFQSVIGNEVREQIIKIEGKLPDILVACIGGGSNAMGLFFPMIKDNTVRMIGVEAGGHGIETGKHAASLNGGVPGVIHGNRTYILQNKDGQIKDAHSISAGMDYPGIGPEHSYYYKCKRIDYVSVTDKEAIEAFKKCCYLEGIIPALESAHALAYVTKIAHSLSNKTTIVLNMSGRGDKDISIIREHS
>CP016327.1|AUI73099.1|292740_293547_+|tryptophan-synthase-subunit-alpha
MKLNKRIINCFEQKKRAAFVTFITAGDQDYEKSLTLINSLPKAGADIIELGMPFTDPIADGEIIQKSTQRSLKTGQNQKKTLELVKAFRLFNKKTPIILMGYYNPIYRYGIKKFIKDAKKAQIDGLIIVDLPPEHAQEVSVPAKKQGIDFINIITPNTNIKRIPFIVKNSSGYIYYISINGVTGGSVPIFYEVEKAVKLIRKYTNLPIAVGFGVKNRNSVKKLANISDAVVVGSALLKQIEIHCYDQKTAISNVLNLTSRLSRGLVKI
>CP016327.1|AUI73100.1|293543_293732_-|ferredoxin
MSLLITTDCINCDMCELVCPNNAIFPGEEVYVINHDLCNECIGVFPHPQCQQVCPVACIVQP
>CP016327.1|AUI73101.1|293734_294298_-|peroxiredoxin
MAIINKKIRPFTATAYLNGKFINISNEDLQGKWSVIFFYPADFSFVCPTELLDLSENYSTFKTLGVEIYSVSTDTHFTHKAWHDSSFTVSKIKFPMIGDPSGNISRSFNVFVAETGLAERSTFVIDTECKIKLAEYNAIGIGRNSKELIRKIQAAQYITNHPNEVCPANWTDGSKTFKQNIDFVGKF
>CP016327.1|AUI73102.1|295045_297694_-|valine--tRNA-ligase
MKYNNWHKNWETTKRLLNTYTSVPFSIMIPPPNVTGKIHIGHAFEYTLIDTIIRQKGMQGYKTLLQFGTDHAGIATQLLMDKKLSHDKVNRMFLGRKLFLKKTLQWCNKTIPKIILQMKSIGMSVDWKKERFTMDYGFYQAVQEAFIKLYKEGLIYRGKRLINWDPNLLTALSDIEVKNLQDLGKLWYIRYHLLNLHKVEAFCQKKAYLIVATTRPETIFADTCIAVHPFDKRYKAFIGKCVVLPLIGRILPIISEEVVDIKFGTGCVKITPAHNLIDYKIGKRQNSLFINMFNNRFKVRQKAEVCILKSGILLKYNLIKLPKVYVGLSIKSLRKNIVKDLLKNKFLEKKVDNHLLMLPCGDRSCAIIEPLLTDQWFVSIKNLANLAINAVKNGNITFIPKNYEKIYINWMYNLKDWCISRQLWWGHRIPAWYDKNNIIFVGRNEEEIRSKYAINFKTKLNQDQDVLDTWFSSGLWTFTTIGWPQIRTKSFNLFHPSSVLITGFDIIPFWVSRLIMMTLKLINELPFKRIFIHGLIRDKQGQKMSKSKGNVIDPIDVINGINYGADALRFTFLSISLPGKNINFDLRRFKGYMNFCNKIWNATRFVLSKIELFYNNEYNQFCCWENVTSINKFIISSLQNTKRKILLYFDEYRLDLASQTIYEFFWYDFCDLYLEITKIVFNSNYIGVKISTINTLLYVFKEILLLLHPFIPYITDEIWINIMQVQYKNKHITTTILNQDLPKIDINKLDDNAIYDVNFINIFITKLRCIRSLIYLKKSIKLTVFCSKVKLFYKSLINKYKIYICNLANINIIKYSEPCINCVSKKNQQFFILHIPLLSFCQRNYLVEELQKKKQLLKLSCLKRNLKLNTKTSFTAITTNKK

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Crispr_ID: CP016327_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP016327_7

301060-301153

Orphan

Consensus_repeat	Method
TTTTTTTTCGTTCATTATTCTTTTAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP016327_7

>merge|CP016327|7|301060-301153|CRISPRCasFinder
TTTTTTTTCGTTCATTATTCTTTTAACTTTTTTCTATTGCTTTGATCTATTTCGCTGTTACTAAATCTTTTTTTTCGTTCATTATTCTTTTAAC

>CP016327|7|7|301060-301153|CRISPRCasFinder
TTTTTTTTCGTTCATTATTCTTTTAAC	TTTTTTCTATTGCTTTGATCTATTTCGCTGTTACTAAATC
TTTTTTTTCGTTCATTATTCTTTTAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP016327.1\|AUI73101.1\|293734_294298_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789
CP016327.1\|AUI73108.1\|306438_307203_+\|chromosome-partitioning-protein	unknown	unknown	gnl\|CDD\|378455
CP016327.1\|AUI73097.1\|288080_288557_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|237573
CP016327.1\|AUI73106.1\|303432_303723_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
CP016327.1\|AUI73109.1\|308059_309526_+\|anthranilate-synthase	unknown	unknown	gnl\|CDD\|184146
CP016327.1\|AUI73110.1\|309503_310082_+\|anthranilate-synthase-component-2	unknown	unknown	gnl\|CDD\|235552
CP016327.1\|AUI73158.1\|314058_314988_-\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|234929
CP016327.1\|AUI73111.1\|310087_311110_+\|anthranilate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234682
CP016327.1\|AUI73157.1\|313477_314032_-\|50S-ribosomal-protein-L25	unknown	unknown	gnl\|CDD\|235534
CP016327.1\|AUI73107.1\|305031_305346_-\|monothiol-glutaredoxin,-Grx4-family	unknown	unknown	gnl\|CDD\|188046
CP016327.1\|AUI73100.1\|293543_293732_-\|ferredoxin	unknown	unknown	gnl\|CDD\|224066
CP016327.1\|AUI73103.1\|297865_299107_+\|acetylornithine-aminotransferase	unknown	unknown	gnl\|CDD\|179933
CP016327.1\|AUI73102.1\|295045_297694_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
CP016327.1\|AUI73098.1\|291553_292735_+\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
CP016327.1\|AUI73112.1\|311109_311928_+\|indole-3-glycerol-phosphate-synthase	unknown	unknown	gnl\|CDD\|234710
CP016327.1\|AUI73095.1\|282901_283954_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234701
CP016327.1\|AUI73104.1\|299100_300927_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
CP016327.1\|AUI73096.1\|285492_288084_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
CP016327.1\|AUI73099.1\|292740_293547_+\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
CP016327.1\|AUI73105.1\|301765_303397_-\|chaperonin-GroL	unknown	unknown	gnl\|CDD\|234573

Protein	Function_ID	Function_description	E-value
CP016327.1\|AUI73101.1\|293734_294298_-\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	3.10726e-111
CP016327.1\|AUI73108.1\|306438_307203_+\|chromosome-partitioning-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	1.97103e-100
CP016327.1\|AUI73097.1\|288080_288557_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|237573	PRK13963, PRK13963, rRNA maturation RNase YbeY.	9.16607e-24
CP016327.1\|AUI73106.1\|303432_303723_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	3.7388e-41
CP016327.1\|AUI73109.1\|308059_309526_+\|anthranilate-synthase	gnl\|CDD\|184146	PRK13565, PRK13565, anthranilate synthase component I; Provisional.	3.72237e-177
CP016327.1\|AUI73110.1\|309503_310082_+\|anthranilate-synthase-component-2	gnl\|CDD\|235552	PRK05670, PRK05670, anthranilate synthase component II; Provisional.	1.33505e-93
CP016327.1\|AUI73158.1\|314058_314988_-\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	0
CP016327.1\|AUI73111.1\|310087_311110_+\|anthranilate-phosphoribosyltransferase	gnl\|CDD\|234682	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional.	3.14887e-101
CP016327.1\|AUI73157.1\|313477_314032_-\|50S-ribosomal-protein-L25	gnl\|CDD\|235534	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed.	7.25879e-51
CP016327.1\|AUI73107.1\|305031_305346_-\|monothiol-glutaredoxin,-Grx4-family	gnl\|CDD\|188046	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation. [Energy metabolism, Electron transport].	1.80149e-51
CP016327.1\|AUI73100.1\|293543_293732_-\|ferredoxin	gnl\|CDD\|224066	COG1143, NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion].	2.20945e-05
CP016327.1\|AUI73103.1\|297865_299107_+\|acetylornithine-aminotransferase	gnl\|CDD\|179933	PRK05093, argD, acetylornithine/succinyldiaminopimelate transaminase.	0
CP016327.1\|AUI73102.1\|295045_297694_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
CP016327.1\|AUI73098.1\|291553_292735_+\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
CP016327.1\|AUI73112.1\|311109_311928_+\|indole-3-glycerol-phosphate-synthase	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	3.19881e-91
CP016327.1\|AUI73095.1\|282901_283954_-\|hypothetical-protein	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	1.42822e-34
CP016327.1\|AUI73104.1\|299100_300927_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
CP016327.1\|AUI73096.1\|285492_288084_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
CP016327.1\|AUI73099.1\|292740_293547_+\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	4.1465e-115
CP016327.1\|AUI73105.1\|301765_303397_-\|chaperonin-GroL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0

>CP016327.1|AUI73104.1|299100_300927_+|elongation-factor-4
MLINTKNIRNFAIIAHINHGKSTLADRLIQLCGGLYKRDFKNQVLDSLDIERERGITIKSQAVTLFYKSKQGKTYRLNLIDTPGHVDFMYEVSRSLYACEGALLLIDASQGIESQTITNFYTAFKRDLTIIPVVNKIDLPQASPKYTISNIKKIFNLHFKYVCCISTKLGLGIKVLLETLIKTIHNPKGDPYKKLLALIIDSWFSKYLGVISLVRIFDGNLKKGDQVIINSTGQSWYIQTVGFYTPKRCLTLKLSAGQVGFFVAGIKDIHGAPVGDTITHANANTDHRISGFKKVKSKIFAGLYPENVKDFKHFSTVLERLALNDASLIYTPENSNVYGCGFRIGFLGSLHLEIIKERIEREHGIKIIITLPSVKYKIKLKTGKIEYIYDPSKLPENYKLFKLYEPIVLARIIVPKIYVGNIIKECITFRGKQLGVVFINNFIKMIYELPMAEVITNFFNRLKSVSKGYASLDYEFYRFKKSNMVRLDILINNNRIEALTMIVPFDKAYKQGQFILKRIKLLLSKQLFDLNIKAVSYKKTLAKTQIKAIRKNVTAKCYGGDITRKKKLIEKQKEGKKRMKSIGNIEIKLNKNIFLSLFKTPNLFDQFS
>CP016327.1|AUI73103.1|297865_299107_+|acetylornithine-aminotransferase
MSINPKTKFKDFYKYILPLYSPQNKIPVKGYGSTIWVQDGRDYIDFSGGIAVNALGHSNPVLLEALKEQSKKVWHVSNSYTNEPSLCLAKKLVKNTFADKVFFCSSGAEANEAALKLSRRYAYNHFGSKKNIIISFKKSFHGRTFFTVNVGGKNNYSHGFGPSPFCIIHAEFNNIQNFRKVINNYTCAVIIEPIQGEGGINVANYSFLKQLRNLCKIYNALLIFDEVQCGMGRIGKLFTYMHFKIKPDIITLAKSIGCGFPLAAMLTTNKVGEAFSIGVHGSTYGGNPLACAVGNIAFDVISNKEVLSGVKRKNKLLKQHIKRINLEFNIFKEVRGLGLLIGIELNKNYINIGRKILKVAFENGLMLLNAGPNVLRLAPSLLISIEEIEEGMSRLYTTIKCIKQNFKYLEYLC
>CP016327.1|AUI73102.1|295045_297694_-|valine--tRNA-ligase
MKYNNWHKNWETTKRLLNTYTSVPFSIMIPPPNVTGKIHIGHAFEYTLIDTIIRQKGMQGYKTLLQFGTDHAGIATQLLMDKKLSHDKVNRMFLGRKLFLKKTLQWCNKTIPKIILQMKSIGMSVDWKKERFTMDYGFYQAVQEAFIKLYKEGLIYRGKRLINWDPNLLTALSDIEVKNLQDLGKLWYIRYHLLNLHKVEAFCQKKAYLIVATTRPETIFADTCIAVHPFDKRYKAFIGKCVVLPLIGRILPIISEEVVDIKFGTGCVKITPAHNLIDYKIGKRQNSLFINMFNNRFKVRQKAEVCILKSGILLKYNLIKLPKVYVGLSIKSLRKNIVKDLLKNKFLEKKVDNHLLMLPCGDRSCAIIEPLLTDQWFVSIKNLANLAINAVKNGNITFIPKNYEKIYINWMYNLKDWCISRQLWWGHRIPAWYDKNNIIFVGRNEEEIRSKYAINFKTKLNQDQDVLDTWFSSGLWTFTTIGWPQIRTKSFNLFHPSSVLITGFDIIPFWVSRLIMMTLKLINELPFKRIFIHGLIRDKQGQKMSKSKGNVIDPIDVINGINYGADALRFTFLSISLPGKNINFDLRRFKGYMNFCNKIWNATRFVLSKIELFYNNEYNQFCCWENVTSINKFIISSLQNTKRKILLYFDEYRLDLASQTIYEFFWYDFCDLYLEITKIVFNSNYIGVKISTINTLLYVFKEILLLLHPFIPYITDEIWINIMQVQYKNKHITTTILNQDLPKIDINKLDDNAIYDVNFINIFITKLRCIRSLIYLKKSIKLTVFCSKVKLFYKSLINKYKIYICNLANINIIKYSEPCINCVSKKNQQFFILHIPLLSFCQRNYLVEELQKKKQLLKLSCLKRNLKLNTKTSFTAITTNKK
>CP016327.1|AUI73101.1|293734_294298_-|peroxiredoxin
MAIINKKIRPFTATAYLNGKFINISNEDLQGKWSVIFFYPADFSFVCPTELLDLSENYSTFKTLGVEIYSVSTDTHFTHKAWHDSSFTVSKIKFPMIGDPSGNISRSFNVFVAETGLAERSTFVIDTECKIKLAEYNAIGIGRNSKELIRKIQAAQYITNHPNEVCPANWTDGSKTFKQNIDFVGKF
>CP016327.1|AUI73100.1|293543_293732_-|ferredoxin
MSLLITTDCINCDMCELVCPNNAIFPGEEVYVINHDLCNECIGVFPHPQCQQVCPVACIVQP
>CP016327.1|AUI73099.1|292740_293547_+|tryptophan-synthase-subunit-alpha
MKLNKRIINCFEQKKRAAFVTFITAGDQDYEKSLTLINSLPKAGADIIELGMPFTDPIADGEIIQKSTQRSLKTGQNQKKTLELVKAFRLFNKKTPIILMGYYNPIYRYGIKKFIKDAKKAQIDGLIIVDLPPEHAQEVSVPAKKQGIDFINIITPNTNIKRIPFIVKNSSGYIYYISINGVTGGSVPIFYEVEKAVKLIRKYTNLPIAVGFGVKNRNSVKKLANISDAVVVGSALLKQIEIHCYDQKTAISNVLNLTSRLSRGLVKI
>CP016327.1|AUI73098.1|291553_292735_+|tryptophan-synthase-subunit-beta
MNIIPNHKGLFGNFGGRFVSETLIPLIIELEKTYKTAKKDESFRKELAYYQKTYIGRSSPLYLADRLTQALGGAKIYFKREDLNHTGAHKINNCIGQILLAKRLGKNRIIAETGAGMHGVATATVAARFGMKCVIYMGSTDVKRQKENVYRMKLLGAKVVPVNSGKGTLKDAMNEALRDWVNNIETTFYIIGTVAGPHPYPLIVRDFQSVIGNEVREQIIKIEGKLPDILVACIGGGSNAMGLFFPMIKDNTVRMIGVEAGGHGIETGKHAASLNGGVPGVIHGNRTYILQNKDGQIKDAHSISAGMDYPGIGPEHSYYYKCKRIDYVSVTDKEAIEAFKKCCYLEGIIPALESAHALAYVTKIAHSLSNKTTIVLNMSGRGDKDISIIREHS
>CP016327.1|AUI73097.1|288080_288557_-|rRNA-maturation-RNase-YbeY
MKKKIKCVYVHMQFIKNNTIKKIVPNESLLSSWFNSFLKPKYKPYKDIVFNIRFVEYKEIIGLNSYYRGFNSLTNIISFSYEALSQRINIQLLGELVITPTLLLYESFKMNKAFIAHCAHIIVHGLLHLIGYNHKNVTDAANMENIEYSNLNKTNIHL
>CP016327.1|AUI73096.1|285492_288084_-|leucine--tRNA-ligase
MMYPFYYKQIELEAQNFWYNHNCFEIVEIPNKEKFYCLCMFPYPSGNLHIGHVRNYTIGDVISRSQRMLGKNVLNPIGWDAFGMPAENAAKKNIVSPTDWTYSNIYYMYNQLKSLGFSYNWDRKITTCKIDFYRWEQWFFIKLIEHGVIYKNNAIINWDPLEKTILANEQVINGIGWRSGAKIEHRKIPSWFLKITDYAYELLRCLANIDWPESVKKMQVNWIGKYKGIEVSFKVIGSVPNCYSYLKVFTQRPDTLFGVTYIRLAPDHHLVELAAQYNYQIKKLCNTFKLCGKCSLAILKNKELGLYVGYNVLHPITNEILPLYVSSFRYFEYGATASMGVPAHSHRDWDFANTYGLPFKTVVSDINGKVPDISKNAYTDFGFIINSGIFNNITCFEAFDYIFSFIKQSKSGVVKQKLKLRDWGISRQRYWGTPIPVKYGITGKPTPLTDEEIPVYLPKHVCLNSKFNLKKIPSFYVLGNGWVRDTETFDTFIESSWYYARFCCTDNKNSILDARVNYWLPVDMYIGGIEHAILHLMYARFFHKLMRDFGLVDCDEPFKKLITQGMVLTYTYYRESFGIKEWFNPLDVCLLKEKKNGNIIPTVKRDGGIVIRNGIEKMSKSKNNGIDPNVLINRFGADTLRLFVMFSAPTEQVLIWSESGIIGSSRFIKRLWNIVHTYIYISGSEHTIIKLSSLRPDQFNLYRQLQKTIKKATSDMIGRHVFNTVISTVMKLTNLVSHFIDIDSSIIGLAVTREALKSIILILAPIVPHITHVLWKVLGFSYAVIDAKWPSYNKHCMLGHLFTVLAQINGKIRKEIKLPLNYHTKTFASTILSSISTKCYLNCKEIHTLIFVYAKVINIVVSL
>CP016327.1|AUI73095.1|282901_283954_-|hypothetical-protein
MIKHNSLFFHVGTLLKGYFSNTTHVKCYIDKIIRYNISVAHSAIHLLNVTIQRVAKNKLIKKGFFINQNKIIFEYKSYKPLTNKILFIIELLINRAIAKQHIILIKLLSKQKKNIKHKNVVVIGKEGGYSIDVCNGTHIKTTKNIGCFCIMSEQCVSKGIRRIEAVTNKNAVRYILKNKLTLKDLSFASNLCLNNVKKDIKHLKNKNKVLLDEFNLFKQITIQKQINKLLSKMFYFFGYKFLIYKIKSKYKKDLFVILHSIVNKLVNKSIIIVYVLNKHNINVFIKITNDCLKFRPYSVFFKQVLQTNKTIFYNATTNVSYLKTSINNLNMLYTKTLKTNIKTFLLKRGL
>CP016327.1|AUI73105.1|301765_303397_-|chaperonin-GroL
MAAKQIRFSEDARTRMVRGVNALADAVKTTLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTADVAGDGTTTATVLAQAIVNEGIKQINSGRSPMDLKRGIDKAILASVEEIKKLSVKCTDSRSIAQVGTISANGDSNIGQLIAKSMEKVGKKGVITVDESRGFEDELEVVEGMQFDRGYISPYFVTNQENMTVELESPYILIVDKKISNIRELLHLLENVAKSGKPLMIIAEDIEGDALATLVVNNMRGIVKVAAAKAPGFGDRRKAMLQDLAILTGSTVISDEIGLNIEKVTIKNLGNARRITMSKENTTIIDGAGSERDIESRVKQIRKQIEETTSDYDKEKLQERVAKLSGGVAVIKVGAATEIEMKEKKARVEDALHSTRAAVEEGVVAGGGTALIRILNKLQNLKGNNEDQTHGIKIALKAFEAPLRQIVNNAGEEASVIINKVKEGVGNYGYNVSTGEFGDLINMGVLDPAKVTRTVLQSAGSIGGMIITTEAMIADHQDENNKMPHSTDGVNGMRS
>CP016327.1|AUI73106.1|303432_303723_-|co-chaperone-GroES
MKIRPLHDRVVVRCIEVEQKTSGGIVLPGNAQEKQNRGEVVAIGKGKILNNGAIRPLDVKIGDTVIFKESFGVEKQKIEDEEVIIMSESDILGILE
>CP016327.1|AUI73107.1|305031_305346_-|monothiol-glutaredoxin,-Grx4-family
MKNKTIEIIKNQIKKNKIILYMKGTPNLPQCGYSAQAVKFIKKYLNRFKYINVLESVHIRHELPKLSKWPTFPQLWINSKLIGGSDIIFEMYKTGELKRLIKKR
>CP016327.1|AUI73108.1|306438_307203_+|chromosome-partitioning-protein
MININYIIAIASGKGGVGKSTITANLALAMNVKGYKVGLLDADIYGYSQSTILNVKKKIFINKKKRIQPIPYYGIKAMSLGFIVKKQTKAIIGRGPIISKLLVDLFTNTNWGYLDYLFIDMPPGTGDIMLSISKSISVSGVIIITTPQDVSLLGAFKGINMFNKIKIPIIGLIENMSYYTCKSCGYSTSIFNNKYNNSLKKYKIKKIGCFALHKTLCDKKPILIAKPNSKISVFFKVIADIVDIKLKPQFRIGL
>CP016327.1|AUI73109.1|308059_309526_+|anthranilate-synthase
MKRILIYKEIISDLDTPLSLYMKVANYHWTFLLESIEGKKQWCRYSIIGLRCHQRIEIYNNKINLFKDKIKIEKTKKIDTLVWLSNYIKTIKKTILKKNKSKTILDGGLVGYLGYDIIRLIEPTIKTYKQYNPINTPDIFLLRANELLIIDKYSGRLTILVNVNIYDLKKGLERIKIILKKLSLCANFNKTELVTHSFQTHIKHKYTLKPIFSSFNKFTFQNYIINLQKYINSGDVMQCVPSQRIIIPFYSQPFNLFRALRVLNPSPYMLFFNFNDHYVVGSSPEILVRVDNKTITLRPIAGTIQKRSGIHNEILKDYKEVSEHIMLIDLGRNDVGKVSSTVRVQNQFLIERYSHVRHIVSTLIGILKHKIDLIDIVRATFPAGTIAGAPKIRALEIINTLEPIRRGIYSGAIGFLSWNGNMNIAIAIRTAIVKNYKLHIQAGVGIIEESQYKKEWNEILNKSSVILKAALIAIVEEKGDKVENINYR
>CP016327.1|AUI73110.1|309503_310082_+|anthranilate-synthase-component-2
MRILIIDNYDSFTFNIVHYFFELGVDVNIIRNNLNIKNIENGYFTHLVISPGPCTPNKAGFSIEVIKHFANKIPILGICLGHQIIGQVFGCKMRKSTQLFHGKTSRIKHINKGLFKGLKTPILINRYHSLIIDRKYLPDNLEVTAQTDCYDITPNVIMGIKHKQYNIEGLQFHPESILSFKSHGLLKNFIKK
>CP016327.1|AUI73111.1|310087_311110_+|anthranilate-phosphoribosyltransferase
MINTILNKLINKRNIKFNQFYKIMKVINFGKIKSTQLASILTALSIKKETSDEIAATAKVINDYYSFNIHNNKVMDLVGTGSDNFNFFNISTSSSFVVAAAGSINVAKFGSKSISSHSGSLDLLNVLGINLYLKKKDIRKCIKRLQLVFLISEFKYKKKIRKIRMDIRIPTIFNIVGPLTNPIKPFKQLVGVYDRRLLNIFSKVFMKLGSKKTLIIHSKEGSDEISLNKATYISELNNGKIINFLINPTKFFFKKNTLDFIQIKSVLQSLDIVIHSIKGHFCLAFEMILLNAGTALYVSGIVNNIHNGLELSKYILISGKAYKKLKTIVFFTKCFKKGIL
>CP016327.1|AUI73112.1|311109_311928_+|indole-3-glycerol-phosphate-synthase
MKILFNILKYKRNTINVCINKLSLKILRKGFYSNKEQFSNNKFIKSIKNKQYKNQTSIIAEIKRCSPSKGIITETKNIEKLALNYFFNGAVCISILTEKNFFKGSKKYILTVKKVFDIPILFKDFIIDEYQVFEARLLCTDCILLIVSILKLDLLKKLYNLALSIGLDVLLEIHNLLELEVALFSLNAKFIGINNRNLYTFNTSINITISLLKYMPSNVVFVTESGILNVNDFIKLQRFGVNVFLIGEFLLSNNDIFLRTLLDKANKYILTY
>CP016327.1|AUI73157.1|313477_314032_-|50S-ribosomal-protein-L25
MQINAFVRYNIGKKANKNLRNNDIIPAIIYGDKKQNVLIGLEKKIILNFIKQETFSSTILYIKLFNKKEKVILRDIQRHPYKNLINHIDLLRINENKQITVLVKIKLIGKELCKGVKQDGGLLVLHKSYVRIKCLPKFLPKAFEINVSNLSVGQSVDIKQFYKTNNFFFIEKTNKIVTVKHVTN
>CP016327.1|AUI73158.1|314058_314988_-|ribose-phosphate-pyrophosphokinase
MLFTGNSNIELAKQISICLKTNLGRSTVNKFSDGEISVEIEENVRGKDIFIIQSTCVPTNNNLIELILIIDALRRASATRITAVIPYLGYSRQDRRIRTTRVPISAKVIADMIVKAGVNRVMTMDLHADQIQGFFDVPVDNIYGSPVFITDIETQKYKNLVIVSPDIGGVVRARALAKKINADLSIIDKRRPKKNQTQVMNIIGDIKERTCILIDDIVDTASTLCKAAESLKKQGAKYVFAYITHAILSGNALNIINNSVLDKLIVTDTIPLSTNAMSSKKIKQISVASIIAEAIRRVNNEESISEMFN

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Crispr_ID: CP016327_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP016327_8

338383-338469

Orphan

Consensus_repeat	Method
TAACTACACAAAAACATAAAACACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP016327_8

>merge|CP016327|8|338383-338469|CRISPRCasFinder
TAACTACACAAAAACATAAAACACAGCACGTAATATCTAATTACTAACATAACTTTTAAAATTAACTACACAAAAACATAAAACACA

>CP016327|8|8|338383-338469|CRISPRCasFinder
TAACTACACAAAAACATAAAACACA	GCACGTAATATCTAATTACTAACATAACTTTTAAAAT
TAACTACACAAAAACATAAAACACA

Protein	Signature genes	Signature genes Name	Protein_function
CP016327.1\|AUI73160.1\|349117_349429_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
CP016327.1\|AUI73133.1\|343367_343610_+\|hypothetical-protein	unknown	unknown	unknown
CP016327.1\|AUI73126.1\|333122_334067_-\|homoserine-kinase	unknown	unknown	gnl\|CDD\|270702
CP016327.1\|AUI73125.1\|332105_333116_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223701
CP016327.1\|AUI73128.1\|335129_335903_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	unknown	unknown	gnl\|CDD\|234996
CP016327.1\|AUI73137.1\|348321_348570_+\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
CP016327.1\|AUI73127.1\|334074_335118_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235440
CP016327.1\|AUI73136.1\|347285_348302_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
CP016327.1\|AUI73134.1\|345023_346766_+\|acetolactate-synthase,-large-subunit,-biosynthetic-type	unknown	unknown	gnl\|CDD\|180578
CP016327.1\|AUI73132.1\|342279_342924_-\|stress-protection-protein-MarC	unknown	unknown	gnl\|CDD\|236814
CP016327.1\|AUI73135.1\|346772_347264_+\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365
CP016327.1\|AUI73131.1\|339483_340071_-\|imidazoleglycerol-phosphate-dehydratase	unknown	unknown	gnl\|CDD\|234873
CP016327.1\|AUI73130.1\|338851_339472_-\|imidazole-glycerol-phosphate-synthase,-glutamine-amidotransferase-subunit	unknown	unknown	gnl\|CDD\|223196
CP016327.1\|AUI73159.1\|348578_348887_+\|16S-rRNA-processing-protein-RimM	unknown	unknown	gnl\|CDD\|274061
CP016327.1\|AUI73120.1\|322830_323457_+\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234971
CP016327.1\|AUI73121.1\|323472_323901_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
CP016327.1\|AUI73123.1\|324696_325755_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|223352
CP016327.1\|AUI73122.1\|323927_324311_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
CP016327.1\|AUI73124.1\|327630_330180_+\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|235444
CP016327.1\|AUI73129.1\|335932_336649_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	unknown	unknown	gnl\|CDD\|179108

Protein	Function_ID	Function_description	E-value
CP016327.1\|AUI73160.1\|349117_349429_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	3.25693e-47
CP016327.1\|AUI73126.1\|333122_334067_-\|homoserine-kinase	gnl\|CDD\|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	4.54345e-102
CP016327.1\|AUI73125.1\|332105_333116_-\|hypothetical-protein	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.15995e-09
CP016327.1\|AUI73128.1\|335129_335903_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	6.8689e-154
CP016327.1\|AUI73137.1\|348321_348570_+\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	3.26898e-31
CP016327.1\|AUI73127.1\|334074_335118_-\|histidinol-phosphate-transaminase	gnl\|CDD\|235440	PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional.	1.35415e-177
CP016327.1\|AUI73136.1\|347285_348302_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
CP016327.1\|AUI73134.1\|345023_346766_+\|acetolactate-synthase,-large-subunit,-biosynthetic-type	gnl\|CDD\|180578	PRK06466, PRK06466, acetolactate synthase 3 large subunit.	0
CP016327.1\|AUI73132.1\|342279_342924_-\|stress-protection-protein-MarC	gnl\|CDD\|236814	PRK10995, PRK10995, MarC family NAAT transporter.	9.03274e-63
CP016327.1\|AUI73135.1\|346772_347264_+\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	4.26838e-82
CP016327.1\|AUI73131.1\|339483_340071_-\|imidazoleglycerol-phosphate-dehydratase	gnl\|CDD\|234873	PRK00951, hisB, imidazoleglycerol-phosphate dehydratase HisB.	1.2667e-91
CP016327.1\|AUI73130.1\|338851_339472_-\|imidazole-glycerol-phosphate-synthase,-glutamine-amidotransferase-subunit	gnl\|CDD\|223196	COG0118, HisH, Glutamine amidotransferase [Amino acid transport and metabolism].	1.00952e-80
CP016327.1\|AUI73159.1\|348578_348887_+\|16S-rRNA-processing-protein-RimM	gnl\|CDD\|274061	TIGR02273, Ribosome_maturation_factor_RimM, 16S rRNA processing protein RimM. This family consists of the bacterial protein RimM (YfjA, 21K), a 30S ribosomal subunit-binding protein implicated in 16S ribsomal RNA processing. It has been partially characterized in Escherichia coli, is found with other translation-associated genes such as trmD. It is broadly distributed among bacteria, including some minimal genomes such the aphid endosymbiont Buchnera aphidicola. The protein contains a PRC-barrel domain that it shares with other protein families (pfam05239) and a unique domain (pfam01782). This model describes the full-length protein. A member from Arabidopsis (plant) has additional N-terminal sequence likely to represent a chloroplast transit peptide. [Transcription, RNA processing].	5.97309e-19
CP016327.1\|AUI73120.1\|322830_323457_+\|ATP-phosphoribosyltransferase	gnl\|CDD\|234971	PRK01686, hisG, ATP phosphoribosyltransferase catalytic subunit; Reviewed.	1.20814e-92
CP016327.1\|AUI73121.1\|323472_323901_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	3.59975e-68
CP016327.1\|AUI73123.1\|324696_325755_+\|SAM-dependent-methyltransferase	gnl\|CDD\|223352	COG0275, COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane].	3.88558e-53
CP016327.1\|AUI73122.1\|323927_324311_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	5.0145e-65
CP016327.1\|AUI73124.1\|327630_330180_+\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0
CP016327.1\|AUI73129.1\|335932_336649_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	gnl\|CDD\|179108	PRK00748, PRK00748, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated.	3.8885e-101

>CP016327.1|AUI73129.1|335932_336649_-|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase
MLIIPAIDLKNGKCVRLKQGRMYKTTDYGDPLKVVQRFVKIGIKRLHVIDLNGAVLGEPVNKYIINKLIKHYPNLILQIGGGIRNSATIKKYLDVGIKYVILGTLAIKKPHRLYNLCKKFGKHIILSIDSYKGYVAIDGWKKIANIKSTELAKNVSNCGISSIIYTDISRDGMMQGLNLKKTIKLANFAKIPIIASGGLNNVFDIVNLKTNKNTFILGTIIGRAFYEGKIDLYKALLI
>CP016327.1|AUI73128.1|335129_335903_-|imidazole-glycerol-phosphate-synthase-subunit-HisF
MSLSKRIIPCLDIDCGKVVKGIKFENTRYAGDPLKIAKFYNEQKADEIALLDIKASYSGKNNTIEVVKKIANEIFIPLTVGGGIKTCKNIRELLNAGADKISINTAAVLNPKIVREASDKFGSQCIVVAIDAKRKTNKNIKEDWEVLTYGGRKNSGISAIDWACKMVKYGAGELLITSIDRDGTKRGFDINLIKTISQRVNVPIIASGGVGNLDHFVEGIKTGKADAVLAASIFHFGEYTIDKAKKYMAKKGISVRF
>CP016327.1|AUI73127.1|334074_335118_-|histidinol-phosphate-transaminase
MRMSYKINKLHPYTPGEQPYKKMIKLNTNENPYPPTPKINKLLKNFNYYKLRLYPDPTTSKLRKIIAKVYNVKSEQIFIGNGSDEVLALAFMTFFCQKLPLLMPTITYSFYPVYCKLYNIRYKTIPLQNKFEINLKKMNISNGGIIFANPNTPTGHAISYIEVNKLLDIHNEYVVLIDEAYIKFGSESAIPLIKKYKNLLIVNTLSKAYSLAGIRIGFAIGSTYLIKGLEKVKNSFNSYPIDVISELIAIEAIKDIKYLKKNCNYIIYIRETLSKQLKDVGFTVLPSKANFMLVKPNNISAKTMFIKLRNHGILLRYFNNIKKYIRISIGTIQQMNYLIETIKYILK
>CP016327.1|AUI73126.1|333122_334067_-|homoserine-kinase
MAVFTKIKKQKLSLFLKSFNIKKQIKFKEVKQGTENSTFFIQTETKKFVLTLFEQGSYKDLTGFIDLLKFLYEHCLPIAMPLIDKNNIIIKKLSGKHALLFPNLYGIHPRTPNIEQCSIIGKTLGRLHSISNKFKLKKQNLRDINWIVLNYYKVISLLTKEDQELMFNQIYLLKHIVTNLPQGILHGDLFRDNTLFYGNNICGLIDFYNGCTGDLIFDLAILINDWCSDQHGNLLEDKYKAILNHYVLERPFTKEEVYILPKMLRLTALRYWISRLLVKNIFPVTHNLRHKEPKKYRDILVSHCKNKYPLYLKN
>CP016327.1|AUI73125.1|332105_333116_-|hypothetical-protein
MNNYMLTRATVISLLIYFMGLLLIFPLHLLPCLLSGLFVFELVKAITPLLQTLIPVNKARLSSVVLLGASIVTILSLFFFTVISFILQDIKTPDNLIQRYMLIFDKARHQLPHSVVIYLPESADELSQIINELIYKHVNELQFVFGCAIHTCFSLLSGMILGAIIALQDIPDIKSLTPLTYALLQRSITLSNAFHNVVFAQLKISLVNTLLSSILLLICAPCLNVYIPLTKTLILITFIMGLIPLIGNLISNILIFIVSLSVSLWTAVIVLTYLIAIHKLEYFLNARIIGLRINSNAWELLFAMLFFDAAFGFSGLIAAPMYYAYFKCELTNEKVI
>CP016327.1|AUI73124.1|327630_330180_+|DNA-mismatch-repair-protein-MutS
MKTKIKKNIYNATPAITQYLRIKNHYHKILLMYRMGDFYEFLFEDAHTASALLNIQLTSKGKYNNKRIPMAGIPCHSLRTYLKRIITAGISVAICEQIKTKKTKKSKLLERKVIRVITPGTLYEDSLLDESKDNLIISIIQKNNKWGISWLEFTTGAFGVLEVDNIHDLRLELDRLNPVELLISRLHKKLPKLPVHKSIIKPISDINFDYNNACKVLFKKLNIKNINKKLNAGVSAAGAIIQYINNNKIYNLAHINHLIFENKKDKLKIDRITKKHLELDVNVNGKQENTLFSVLNNTMTHMGSRLLKKWINNPITNYDLVFSRQKGVEIVLTNNFIDILQKYIKKIGDIERIVTRISLKTAKPLDLIKFKIALNVFPKLKTLLKGLLIVNKNSKSILNYIHKEIFTFPNIALLLDEALVDNPPNSFRYGYVIKSHFNKNLDKLRKIYTNSEKFIKTFENKEKLRTGIIKLKVTYNKLHGLFIEIPKGRKHKYKIPKNYIRTKTLKNSERFYTSELKYFEKRLIESKEKSIKYEKSIFKKLIKVLVGNIPYFIKTSKSLATLDVITTFAERALTLNYCKPIINKNKIGIKIMEGRHPVIESTTNHHFVPNNLFLNHNKSIHIITGPNMGGKSTFIRQIAIIVLLTYIGSYVPAKYAEIGPIDQIFTRIGGYDDLSAGKSTFMIEMHETAKILNTATFKSLVLMDEIGRGTNPTEGLCLAWACLERIIQIKALTLFSTHYFSLTQIAKKFKQITNLHFSASIKSNKVSYIYNIQKGATNNSYSSSVASLANIAQGVINKSNNLIKHFQDHQKSLNKRHTLMKYIKSFKYKDLTRYLKFIKSFFKNLKDMF
>CP016327.1|AUI73123.1|324696_325755_+|SAM-dependent-methyltransferase
MTHKSLFFNKAIDYLITNKDGLYIDCTLGLGGHSKQILNRLSINGLLIALDNDLNTKTLVKNLEFYLDKRFSFININFKYLEIIAKKKHLFGIVSGILLDLGISTYQIKDYKRGFSFFINGPLDMRINNTFGITACCLLNHYKFKQIFKIFKTYGEDEQLYRLTVEICNRRHHFPFKMTLELSNLIKTLKFTNYHIKHQLIKTKPKIQKTYIIHHKSIKIKQKFIKHSKSINTKHIRIKENTTKNKIIKTNNNSINKKKKKHIHPSTKIFQAIRSYINNEIQNLEIVIITSLKLLKTNKKLIIITFNSLESQIVNKVLKTTLNKVNKIYPSIEEVFYNNSSRCSAIFIIQKL
>CP016327.1|AUI73122.1|323927_324311_+|30S-ribosomal-protein-S9
MYFYGTGRRKTASARVFLKIGNGKFIINNNTLKKYFHNINLYYLMIQPLELTNNVNTFNIKITVNGGGVKSQAEAIRHGISRALVAYNNNLRYKLRLNGYLKRDSREVERKKIGFKKARKSPQFSKR
>CP016327.1|AUI73121.1|323472_323901_+|50S-ribosomal-protein-L13
MKTLNVKINDLKREWYIINAYNKKLGRLSTKIVHFLLGKNKVIYNSYLNIGDNIIVINADQIKLTGNKLIQKKYYYHTGYPGGLRKTTLLELMKTNPEKVIKQSVKGMLPKNSLGRLISKKLKIYKGKQHPHISQQPLELLI
>CP016327.1|AUI73120.1|322830_323457_+|ATP-phosphoribosyltransferase
MIEPLVIALSKGRILFKSLSLLKKAGIIPIESVENNRKLLFNTKKKYLNLIILRAIDVPTYVKLGAADMGIVGKDVLLENGSKGLYEPIDFKISKCRLMTAGLIGFNVKNTTRKVATKFVNIAKRYYASKGIKANIIKLYGAMELAPIMNLAEEIIDIVDTGNTLKENGMEPKTLIKNISTRLIVNKTSMIIKYKSINPLIELLISII
>CP016327.1|AUI73130.1|338851_339472_-|imidazole-glycerol-phosphate-synthase,-glutamine-amidotransferase-subunit
MAIIIIDYGIGNLYSVANAIKKVTKEKVYITNDAKKIKLANRIILPGQGAIKDCIKELKKKELYWLLKEMIHTTNKPVLGICIGQHLLMESSEENKGVFGINYIKGIVKNYKNKNFKIPHTGWNIVYKHKEHQIWNGIKSGSRFYFVHSFYVKTRFKNNVLGVTEYGGKCANVITYYNSVITVQFHPEKSSSLGLKFLKNFINWLP
>CP016327.1|AUI73131.1|339483_340071_-|imidazoleglycerol-phosphate-dehydratase
MSVNKKKKYRTANIYRETKETKIRVYVNLDGQGKINIKCGIELLEHMLDQITNNGQIDLTIKTNVYSHIDHHHTIEDIGIAMGKAFKKALGKKIGIKRYGCSYVPMDESLSRVVIDLSGRPSLHMTKVGKFDLFREFFKGWVNNCKSTLHIDILKGFNSHHQIESIFKSFGISIRKAITKDKRITNKLYSTKGTL
>CP016327.1|AUI73132.1|342279_342924_-|stress-protection-protein-MarC
MFIEYIHSVLFFFITLLPVANPIASTTLLLTLGKKIKAKERKKQIYFATLYVGIIILVCFYAGKKILNAFGVSINALRLAGGIILLYFGFDLLFNVTEKKQITEKNHLQQSHLNISFVPLALPGTAGPGTIALIISSSSSLPSSCLIHFVIWSVTALFTLMFLICLLSANKIFKRIGPSGIDAISRIMGFILISMGVQFIITGFQNMLIVLFHL
>CP016327.1|AUI73133.1|343367_343610_+|hypothetical-protein
MFSLEVIFKCFRLVVCVVYFVVRGYFGILCLSYFADSCYNVVCCFKVFRIYVLEVVILTYNLYYHYLVLVCTFFVFFVRC
>CP016327.1|AUI73134.1|345023_346766_+|acetolactate-synthase,-large-subunit,-biosynthetic-type
MELLSGADMIIRFLKDENVKYVYGYPGGAALHIYDALFRQKVVKHILVRHEQAATHMADGYARASVKPGVVLVTSGPGATNAVTGIATAYMDSIPMVILCGQVVSKLIGEDAFQETDIVGVTRPIVKHSFTIRDTADIPTILKKAFYIASTGRLGPVLVDIPKDMTAPNELYEYIKQNDIKLREKKKNVCNNKEFIKKALKLLLKAKKPVLFVGGGAITGKASQKIREFANIAYLPVVTSLMGIGAYPQSDFQYIGWPGMHGSYEANNAMHNSDLIFCVGARFDDRVTNNTEKFCPNAKVIHVDIDPCSISKTILADIPIIGSAKKVVKELLSKINKSYKDEINLENRKKHLEIWWKCINKWIKNRDGKLYKPVTALSRDLIKPQQVIEAVYKKTKGEAIIATDVGQHQMFAAQYYKFNKPNKLITSGGLGTMGFGLPAAMGVKLSYPHENVVLITGEGSFQMMMQELSTCKQFDISLKIIHLNNGSLGMVRQWQDINYKARHANSYVESLPEFHRLFEAYGLNAITVKVIEELESALETVFINKNELVFLNIYIDPLEHVYPMQKPLGAINDMIISKAE
>CP016327.1|AUI73135.1|346772_347264_+|acetolactate-synthase-small-subunit
MRHIISILLENEPGALSKIVGVFSQRNFNIETLNVAHTEDITLSRLTLTTNGDACVIEQIIKQLNKLVDVVKILDLTEVSHIARELMLVKVKAEADDRRAEIKRITDIFRANIVDVTTTDYIIQITGDEDKLDAFINALKGINEVVRTGVSGITRVWVKVKLS
>CP016327.1|AUI73136.1|347285_348302_+|ketol-acid-reductoisomerase
MKIYYEKDCNRSLIKQKRVVVIGYGSQGHAHANNLKDSGVNIKVALYKGSRSWKKAEVAGLKVEVIEKAIIDADIVVMLVPDELQKNIYYRYVENNIKSGAVLIFAHGFNVHYQQIEPRQDIDVVLVAPKAPGHTVRTTYMQGGGVPSLIAIYKDNSGKAKDIALSYASAIGCGKTGIIQTTFKEETETDLFGEQAVLCGGVSALITAGFEVLVEAGYSAEMAYFECLHELKLIVDLIYEGGLGDMRYSISNTAEYGDYVSGHKIINNDTKKNMKTLLENIQNGKFAKDFIIEKKTGFTLLKTKRRINSEHKIEKVGKVLRSMMPLICKNKIIDKNKN
>CP016327.1|AUI73137.1|348321_348570_+|30S-ribosomal-protein-S16
MVKIRMTRCGCKNRPVYQINVKDSRSSRDGKFIEKIGYYNPLVISEKRFCINSSRLGYWKNKGAKISNRVLSLLKKNKKDKK
>CP016327.1|AUI73159.1|348578_348887_+|16S-rRNA-processing-protein-RimM
MGSIAKSYGVKGWIKVNSYTNQRCNIIDYSRLWILEIKGKNIYLKVKRIRLVHRFFIVQLYGIKTCEKAKTLIGSLIKLQKKLLPNLQKGEYYLYQFKTLRV
>CP016327.1|AUI73160.1|349117_349429_+|50S-ribosomal-protein-L19
MKTKIIPKFMTGDTVIVQIKVLEGSIERLQAFEGLVIGKRNRGLNSSFTVRKVTSGIGIERTFKTYSTCIFSIKINRKGKVRKSKLYYLRDLKGKSARINNIS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage