CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP016343	Candidatus Portiera aleyrodidarum strain China 1 chromosome, complete genome	5 crisprs	NA	0	0	0	0

Cas Category Instructions

Results visualization

1. CP016343

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CRISPR-Cas detection and classification

Crispr_ID: CP016343_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP016343_1

264752-265043

Orphan

Consensus_repeat	Method
TAGTTGTTTAGTTATTAGAGTTTA	CRISPRCasFinder

4 spacers

The CRISPR arrays of CP016343_1

>merge|CP016343|1|264752-265043|CRISPRCasFinder
TTTTTTTTTAGTTGTTAGATAATAATAAGTGCTTGTTGTTATTGGTTTACTTATTTTTGGTTATTAGTTTTGTTTATTTTGATGGTTGTTTTTACTAAAACTTTGTTTGTTTAAGTATCGATTGATGTTTAGTTGTTAGCCGTTTAAAAATTGTTGATTTGTAATTTGAGTGTATAATTTTTGATGGTTAGTAGTTGTTTAGTTATTAGAGTTTATATTTTTAGATGTATGTTGTAATATTTTAATGTTGTTAAAGAGGTTTATTGATAGTTGTTTAGTTATTAGAGTTTAG

>CP016343|1|1|264752-265043|CRISPRCasFinder
TTTTTTTTTAGTTGTTAGATAATA	ATAAGTGCTTGTTGT
TATTGGTTTACTTATTTTTGGTTA	TTAGTTTTGTTTATTTTGATGGTTGTTTTTACTAAAACTTTGTTTGTTTAAGTATCGA
TTGATGTTTAGTTGTTAGCCGTTT	AAAAATTGTTGATTTGTAATTTGAGTGTATAATTTTTGATGGTTAG
TAGTTGTTTAGTTATTAGAGTTTA	TATTTTTAGATGTATGTTGTAATATTTTAATGTTGTTAAAGAGGTTTATTGA
TAGTTGTTTAGTTATTAGAGTTTAG

Protein	Signature genes	Signature genes Name	Protein_function
CP016343.1\|AUI73336.1\|274532_275879_-\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
CP016343.1\|AUI73338.1\|278986_279430_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|274307
CP016343.1\|AUI73332.1\|271578_271827_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178955
CP016343.1\|AUI73403.1\|271347_271566_+\|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl\|CDD\|178955
CP016343.1\|AUI73321.1\|251386_252685_-\|glutamate/aspartate:proton-symporter-GltP	unknown	unknown	gnl\|CDD\|183075
CP016343.1\|AUI73335.1\|273117_274500_+\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
CP016343.1\|AUI73334.1\|272273_272519_+\|Clp-protease	unknown	unknown	gnl\|CDD\|235422
CP016343.1\|AUI73322.1\|256448_257279_+\|5,10-methylenetetrahydrofolate-reductase	unknown	unknown	gnl\|CDD\|273212
CP016343.1\|AUI73331.1\|266160_267522_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
CP016343.1\|AUI73329.1\|261866_262712_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703
CP016343.1\|AUI73326.1\|259042_260413_+\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
CP016343.1\|AUI73339.1\|283383_284244_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
CP016343.1\|AUI73325.1\|258766_258979_-\|hypothetical-protein	unknown	unknown	unknown
CP016343.1\|AUI73333.1\|271949_272192_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235422
CP016343.1\|AUI73328.1\|261386_261842_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
CP016343.1\|AUI73324.1\|257955_258156_+\|hypothetical-protein	unknown	unknown	unknown
CP016343.1\|AUI73337.1\|275979_277677_+\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
CP016343.1\|AUI73323.1\|257516_257846_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340873
CP016343.1\|AUI73327.1\|260409_261381_-\|glucokinase	unknown	unknown	gnl\|CDD\|234716
CP016343.1\|AUI73330.1\|262689_264291_+\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424

Protein	Function_ID	Function_description	E-value
CP016343.1\|AUI73336.1\|274532_275879_-\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	1.09907e-125
CP016343.1\|AUI73338.1\|278986_279430_+\|peptidoglycan-binding-protein	gnl\|CDD\|274307	TIGR02802, Peptidoglycan-associated_lipoprotein, peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.	0.00287501
CP016343.1\|AUI73328.1\|261386_261842_-\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	5.59392e-65
CP016343.1\|AUI73403.1\|271347_271566_+\|ATP-dependent-Clp-protease-proteolytic-subunit	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	4.0643e-46
CP016343.1\|AUI73321.1\|251386_252685_-\|glutamate/aspartate:proton-symporter-GltP	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	0
CP016343.1\|AUI73335.1\|273117_274500_+\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	4.70969e-172
CP016343.1\|AUI73334.1\|272273_272519_+\|Clp-protease	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	2.21046e-29
CP016343.1\|AUI73322.1\|256448_257279_+\|5,10-methylenetetrahydrofolate-reductase	gnl\|CDD\|273212	TIGR00676, 510-methylenetetrahydrofolate_reductase., 5,10-methylenetetrahydrofolate reductase, prokaryotic form. The enzyme activities methylenetetrahydrofolate reductase (EC 1.5.1.20) and 5,10-methylenetetrahydrofolate reductase (FADH) (EC 1.7.99.5) differ in that 1.5.1.20 (assigned in many eukaryotes) is defined to use NADP+ as an acceptor, while 1.7.99.5 (assigned in many bacteria) is flexible with respect to the acceptor; both convert 5-methyltetrahydrofolate to 5,10-methylenetetrahydrofolate. From a larger set of proteins assigned as 1.5.1.20 and 1.7.99.5, this model describes the subset of proteins found in bacteria, and currently designated 1.7.99.5. This protein is an FAD-containing flavoprotein. [Amino acid biosynthesis, Aspartate family].	1.97097e-85
CP016343.1\|AUI73331.1\|266160_267522_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	9.30512e-156
CP016343.1\|AUI73329.1\|261866_262712_+\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	3.296e-83
CP016343.1\|AUI73326.1\|259042_260413_+\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	7.35584e-141
CP016343.1\|AUI73339.1\|283383_284244_+\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	3.61741e-143
CP016343.1\|AUI73333.1\|271949_272192_+\|hypothetical-protein	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	1.74751e-32
CP016343.1\|AUI73332.1\|271578_271827_+\|hypothetical-protein	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	3.89008e-38
CP016343.1\|AUI73337.1\|275979_277677_+\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
CP016343.1\|AUI73323.1\|257516_257846_-\|hypothetical-protein	gnl\|CDD\|340873	cd17315, MFS_GLUT_like, Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily. This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.78296e-16
CP016343.1\|AUI73327.1\|260409_261381_-\|glucokinase	gnl\|CDD\|234716	PRK00292, glk, glucokinase; Provisional.	2.56707e-124
CP016343.1\|AUI73330.1\|262689_264291_+\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0

>CP016343.1|AUI73330.1|262689_264291_+|glutamine--tRNA-ligase
MIKKNIIDYLSKDSKFRSLFKKNFITRFSPEPNGCLHLGHVKSIWVNCSLAKVLNGNCYIRFDDTNPIKENKIYITSVLEDIHWLGFKFKNINYASNYFNKLFEWALLLIKQGKAYIDDLSISEIKQYRGDFKSVGYNSPYRKRNIKDNIFFLKKMYKGFVKEGKKVLRAKIDMNSKNINLRDPIMYRIINVYHYRTGNYWKIYPSYDFTHGQSDLLEGITHSICTLEFETNRYLYQWFLKNIFNDYFKYPKQIEFSRMNISFSLTSKRKIKLLIDKNFIFGWDDPRLSTISGMRRRGYTPTSLKNLCKITGITRSNNNIDIHLQYYAIRSDLENKVIRVMCVINPIKLILTNLIVDYEEIITVKNHPFIEMGARSMYFNREIWIDLKDFNNKQNLFRLSKGKNVRLRHSYIIKCKKFVFFKNEQIKEIQGIVCLNSKHKNIEGKIFKGVIHWVSVKHSVPVLIRLYNSLLHKNIVNNNSLFFTDSIGEPIFSHIKPETRVQFERIGFFCADRYDFNQTNFVFNEIISLKTFI
>CP016343.1|AUI73329.1|261866_262712_+|shikimate-dehydrogenase
MEKKISCVFGKPIKHSMSPILHNSFGKKNNICLYYKAINIRNKILLKKEWINFVICGGIGVNITIPYKQYAIKLANKLSYRAKIAGAVNTLIINKKNIFGDTTDGVGLIRDLNRLNINLLNKRILLLGAGGAVNSVIQQVLDLGPNKIYLVNRTLLKCKDIRNRFNLKNIIQFCSYDELKNKNAFDVIINGTSLSIKKDKINFNNNAFKTTIAYDLMYSKYITKFLKFAKNNNAKIYDGLGMLIEQAAETYFLLNNIRPKIKNLHKNIRNLLNNNDKKKYY
>CP016343.1|AUI73328.1|261386_261842_-|peptide-deformylase
MNILKYPDKRLKILAKPIKLINYKIRTLIFKMLNTMYAHNGIGLAATQINKHIRIFVMDISKNYNQPLIIINPKYIYVSTTYKKVKEGCLSIPNYFEYIYRSINIIIKAIDINGNKFIINASGLLSQCIQHEIDHLNGKLLIDNLSNKQKG
>CP016343.1|AUI73327.1|260409_261381_-|glucokinase
MNHLALVGDIGGTNVRLALALVSTNQLKLYKIKIFKCINYLNVYEVIKQYISLVGCDYPKQACLAFACPVNSNFIKMTNNSWTIAKYELKHKLNLQKLKIINDFTAIALGLTHIQAKDLYKLGYGKTNNNSNKILIGPGTGLGIAGLIHTKNSWIPFSGEGGHISFAPIDNFEVYILNWFQNNYKRVSIERILCGQGIVDLYYAHVNYYINHSYNVLTTPDAITKAALKKNDPLAYKTILMFCKLLGHVTGDMALTLGAKGGVYLCGGILPRIIKILDNSDFRNSFDNKGRMSFYNKEISTWLVKSKWIGLLGSADALFNNKL
>CP016343.1|AUI73326.1|259042_260413_+|glucose-6-phosphate-dehydrogenase
MKIIVKNITSLSLILFGALGDLALRKLYNSLFILYKKNIINKKINILCLARKVETLNTFRYTIYKRLIKANYINNKRDLVKLINFINCLYYLNIDFTTLTHFKFLKKKNQNQNLKNNLSKLVYFAVSSNIFKIICKYLNLNKQLTKTAKIILEKPIGCNLKSSININNYINNIYFERSIFRIDHYLGKRQVKNLLSLRFLNPVFYMLWNKKYITHIVIKLAEHLGIEDRWGYFDKTGQLRDMVQNHLIQLLSMITICIPKTKQISVKNIYKEKIKILKDLNNSFLTVDIKYGQYISNKLKNKIYNGYLEEKNSNKNSSTETFVYIKTKINNFHWYGIPFFLMSGKRLKQKLSQIKIYLKKNSLNNDLNNKLIINLQPKEDINLNKFKIKQMSLNKNNYLDSYEFLILEVIKGKQDWFVSKEEIDYSWRWIEKVIHIWKQKNLPIFYYKSFTWGPIG
>CP016343.1|AUI73325.1|258766_258979_-|hypothetical-protein
MEISSMLNFFTHKPQNKKSTKRHNEQSTKPQHKLLIINKNKINIIAKTKIENKIYNIYHTTVTKLIPLKK
>CP016343.1|AUI73324.1|257955_258156_+|hypothetical-protein
MLLKFSLSSLLTSNLDALKLCKSFMASRFLFVEASHLGLAGINNMQKNKSIEGTIKSSNILLQFCK
>CP016343.1|AUI73323.1|257516_257846_-|hypothetical-protein
MNVLINFYGFTGTKPQLLSTLTVGLVNVLSTIVAIILVDKVGIKPILYFCFTIMAIGIALLSLILYTRTLHFIQFLSIFSLLIFVAGFAMSAGPIIWILCAEIQQVYGR
>CP016343.1|AUI73322.1|256448_257279_+|5,10-methylenetetrahydrofolate-reductase
MKKNEVEISFEMFPQKEHYKTKSFIKKIKQLYKKKDIKFCSITYGAGGSNKKNTLEIIKNIKKQKIECVPHLACITTKEKDLIKTLKSYKKIGIKKILALRGDIKTNTKTKFINSLDLLTLIKKNFYKNFEVIVTAYPEMHPNTISFEKEVCFVIKKFMFGANKAITQYFYDPDSYFYFVEKVRKYGVEKHIIPGIMPISNVNNLKKKKKKCGANIPKWIYKKLEFCKTDNDIEHIGNDIVIKLCETLIKGGAPGLHFYTLNKLEPTLNILNSLIT
>CP016343.1|AUI73321.1|251386_252685_-|glutamate/aspartate:proton-symporter-GltP
MKIIQSKNLALKIIIGLCFGIITGLILHQNNYIKSWVLINVLQPLGEIFIRLIKMIVVPIILTSLIIGISGIDNTKNLSRIGLKTILYFELVTTLAILVGLISANIFKPGYGINMSSLSNNIDLSQYKYFSNSIQKKEHTNILNIIVELIPSNIFQSFVTGNILSIIFFSVIFSLGLSGLPFKNKNLFINIIKTISETMFNVTSIIMRFSPIGVFSLISNTVANFGVLSLIPLIKLVVLVYFTIIFFIFIILGSIAWFFGFNILILLHILKDEILLAFTTSSSESVLLNLMAKLENYGAPKTICNFVIPTGYSFNLDGSTLYQSIAALFIAQLYGIKLTLFTQLTLILTLMITSKGIAGIPGVSFVVLLATLGSIGIPIEGIAFIAGVDRILDMARTVLNVVGNALAVLIVSKWENQYDTSKGLRYYKHKKV
>CP016343.1|AUI73331.1|266160_267522_+|cysteine--tRNA-ligase
MYIYNTLKKNKELLVPINLNKLKIYVCGSTVYDYCHIGHGRNMFIYYFFYKYLKHRGYILKYIRNITDIDKKIIKKSIKTNENTKILTQRIINSIHKDEKKLGLLAPDCEPKVSDYKNIIIYYINKLLKNDFAYIKKGNVFFKIKTHKLYGMLSNQTIKNFNFFLSKNFSKYKKYKLDFSLWKKSQYKFGWASPWSVGFPGWHIECSVLSKIYLGNKFDIHGGGLDLIFPHHENEKAQSELLFCKPHVNLWVHSGHLNVNNKKMSKSLHNTILVRYIIIKYNNEVINFFFLITHYRKSINFTIDQLDIVLNLLNHILYKIICITPKRQKYNNVFYNQIILALENDFNTVKAISILFNLLYKTKKAFKLGKIKKSQSLCFELIRLGKILGILKSLKKIKPQILFNINKVGSLILKRNIYKKETNFLQSDKLRISLTVFDIFIQDTIKRTFWLNR
>CP016343.1|AUI73403.1|271347_271566_+|ATP-dependent-Clp-protease-proteolytic-subunit
MRLLKERIIFIVGNIEDNKANLIVAQLLSLEYENPKKDINLYINSPCGIVTTGLSIYDTMQYVKPDVATICI
>CP016343.1|AUI73332.1|271578_271827_+|hypothetical-protein
MAAIIKSGGNKGKRFCLQNARIMIHQPNVKKKGQASDIEIHTKEIISIKTKLNKILSQNTGQNIEKIKIDTDRNNFMDAKMA
>CP016343.1|AUI73333.1|271949_272192_+|hypothetical-protein
MKKIYCSFCEKPQAEVKKFIAGKSIYICNECIDLCNEVFKEETRNVEFEFVLPKPKIFYNCLDKYIIGQKRAKLVLSVAV
>CP016343.1|AUI73334.1|272273_272519_+|Clp-protease
MFAETLALLLLVHFTIADATSLTEACYVGDDVEIIIQNLLQKCDYNIDKAQNCIVYIDEKIIKYVYYKRCYTTNVQKTRYK
>CP016343.1|AUI73335.1|273117_274500_+|cardiolipin-synthase
MKYIKTFLNIILFCFLLSSIIIALFMSRTPQSAIAWLISLITVPYFSIPMFWLLSCPNFCGYLIKKNSLHIKKFKNTFTINCNVQVVEKLSSMPLTQSNFVKLLINGYITFKSMFDGIKRAKKYILIQFFIIKNDKLGQEFKNSLIYSAKKGVNIFVIYDQIGSHNLSKSFIKEFKKAGINLLKFGFCKGWKNLLKINFCNHRKLILIDGKEAWIGGLNIGNEYLGINKKIGYWRDTHLHIIGPSVLCLQEIFLEDWFWSTDTKIHNLNWKPILSNIKKKHIIVVPSGPITNRNNASLLIQNSINIAKQRFWITSPYFIPDQSVIDSLKLAALRGVDVKIIIPERTDHLFVYLSTFSYFSELIRVGVKFYKYIKGFLHQKVMLIDNHTASVGTINLDNRSFRLNFEITAYIIDGDFAKDVKYMLQQDLLYCNLIHLNEINCRSLINKLLSKSAFLASPIQ
>CP016343.1|AUI73336.1|274532_275879_-|magnesium-transporter
MKKNNIIPNLWKALSNKNYKEIKSLLKYFRSADIAEMISRTSNKLIIQILNSQSSKRKADIFSYLPKDKQFEITKELNNEEIIKIFVKMNSDDSADVFNMFEPIRRENILRSMANKVRENLIKLSSYEDGTAGAIMTSNYVVIPENITVLQALNQIKQTAPDAETIYQIYVLDQDQKLTGTLSLRQIILANPIALIKDLMIKDVIYVHTNSKQEYVTKMISHYDFLAIPVINSEHKLVGIITYDDAMDVVERETTDDFHKSGSVGTLEYNIVRTNLLTLYSKRIFWLVLLIFGNLFSGAGIAKYEDTISSKISLVFFLPLLIGSGGNAGSQASTLMIRGLGTGEINIKDWAKLMSKELLVSGILGITMAIVIFPIGYIRGGIEVAYSVAISMIIIVIIGSLLGMSLPFCLNRLGFDPAAASAPLVATLCDSLGVLIFFSIATIILNVK
>CP016343.1|AUI73337.1|275979_277677_+|aspartate--tRNA-ligase
MRINYCGKVNQTLLNSYVKLYGWVNKIRDHGGILFLDLRDMYGRTQLVIDSKKLDFTNFVLAKKLKSEYIIKVIGLIKLRPVKDGFTNKIDIFVIELNLLSKSIKLPFKLYAKKKIKEEIRFKFRYIDLRQKKYIKKILIRSQIIHKIRSFLDINKFIEIETPILSNITVEGARTFIIQSHKQTFALPQSPQIYKQILMCSGLDRYYQIAKCFRDEDLRSDRQPEFTQIDIETSFMNKQAIINVVEKMIKSLFKELLHFTFSSAFKIIKYTDAINKYGTDKPDLRVPIKITDIEDVIPQSLTCIFLNKLHKLTSQCNRIAAIKLKGGVCLSLKQIIKYISFVKLYGAKGLIWIKVYNINLGLNGLQSPILKHITDEVIHNLKKRLHLKNGDLVFCCADTINIVNTSLSVLITQIANDLKLYIKAWAPIWVVNFPLFKRDIVGTLTSYHHPFTAPTSTLDDIIYNPEKAFANSFDLIINGIELGGGSIRINDYKIQKIIFKLLGLTQRTLNNNFGFFLKAFKFGVPPHGGLALGLDRIVMLLTKSDNIRDVIAFPKTNKFICPLSV
>CP016343.1|AUI73338.1|278986_279430_+|peptidoglycan-binding-protein
MIKKYMLKRLILAISLLLVLKNNNVILNEIKLNKFFIFNKAPFIKTIYFNYDLYYFSNKINNILKQYVIYIRNNPSKQLLLKINTNVLGNIKYNFILNKSRMSFIVNNLVLNGIHKNNIKYIICVKNKKVYNELNTLNNNKLIVNIL
>CP016343.1|AUI73339.1|283383_284244_+|lipoyl-synthase
MRHKPSWIKIRVPLYNEINNIKNKIRKTYLHTVCEESSCPNILNCFNEKIATIMILGNKCTRKCPFCDVLYGKPIKINYYEPFDIIKILIKLKINYIVITSVNRDDLEDGGANHFSKCIGAINRLYKHIKIEILIPDFRGKSDIAINILIKNKPTVLNHNIETIHNLYLQVKPGATYDISLNLLKQIKKYCPKIKTKSGLMVGIGENDKQLINVIKDIKTNQVDIITIGQYIAPSNFHLPIKRWVHPTSFYFYAKLCYILGFNYIASGPLIRSSYKAKNQNYGKNI

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Crispr_ID: CP016343_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP016343_2

265106-265210

Orphan

Consensus_repeat	Method
TAGTTGTTTAGTTATTAGAGTTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP016343_2

>merge|CP016343|2|265106-265210|CRISPRCasFinder
TAGTTGTTTTGTTTGTAGATTTTATAAAAATTATTGTTTGGTTGTTATAGATGTTGATGTTTGTTGTAAGGTTATTAAAAATGGTTTGTTAGTTGTTAGAGCATA

>CP016343|2|2|265106-265210|CRISPRCasFinder
TAGTTGTTTTGTTTGTAGATTTTA	TAAAAATTATTGTTTGGTTGTTATAGATGTTGATGTTTGTTGTAAGGTTATTAAAAA
TGGTTTGTTAGTTGTTAGAGCATA

Protein	Signature genes	Signature genes Name	Protein_function
CP016343.1\|AUI73336.1\|274532_275879_-\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
CP016343.1\|AUI73338.1\|278986_279430_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|274307
CP016343.1\|AUI73332.1\|271578_271827_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178955
CP016343.1\|AUI73403.1\|271347_271566_+\|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl\|CDD\|178955
CP016343.1\|AUI73321.1\|251386_252685_-\|glutamate/aspartate:proton-symporter-GltP	unknown	unknown	gnl\|CDD\|183075
CP016343.1\|AUI73335.1\|273117_274500_+\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
CP016343.1\|AUI73334.1\|272273_272519_+\|Clp-protease	unknown	unknown	gnl\|CDD\|235422
CP016343.1\|AUI73322.1\|256448_257279_+\|5,10-methylenetetrahydrofolate-reductase	unknown	unknown	gnl\|CDD\|273212
CP016343.1\|AUI73331.1\|266160_267522_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
CP016343.1\|AUI73329.1\|261866_262712_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703
CP016343.1\|AUI73326.1\|259042_260413_+\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
CP016343.1\|AUI73339.1\|283383_284244_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
CP016343.1\|AUI73325.1\|258766_258979_-\|hypothetical-protein	unknown	unknown	unknown
CP016343.1\|AUI73333.1\|271949_272192_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235422
CP016343.1\|AUI73328.1\|261386_261842_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
CP016343.1\|AUI73324.1\|257955_258156_+\|hypothetical-protein	unknown	unknown	unknown
CP016343.1\|AUI73337.1\|275979_277677_+\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
CP016343.1\|AUI73323.1\|257516_257846_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340873
CP016343.1\|AUI73327.1\|260409_261381_-\|glucokinase	unknown	unknown	gnl\|CDD\|234716
CP016343.1\|AUI73330.1\|262689_264291_+\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424

Protein	Function_ID	Function_description	E-value
CP016343.1\|AUI73336.1\|274532_275879_-\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	1.09907e-125
CP016343.1\|AUI73338.1\|278986_279430_+\|peptidoglycan-binding-protein	gnl\|CDD\|274307	TIGR02802, Peptidoglycan-associated_lipoprotein, peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.	0.00287501
CP016343.1\|AUI73328.1\|261386_261842_-\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	5.59392e-65
CP016343.1\|AUI73403.1\|271347_271566_+\|ATP-dependent-Clp-protease-proteolytic-subunit	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	4.0643e-46
CP016343.1\|AUI73321.1\|251386_252685_-\|glutamate/aspartate:proton-symporter-GltP	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	0
CP016343.1\|AUI73335.1\|273117_274500_+\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	4.70969e-172
CP016343.1\|AUI73334.1\|272273_272519_+\|Clp-protease	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	2.21046e-29
CP016343.1\|AUI73322.1\|256448_257279_+\|5,10-methylenetetrahydrofolate-reductase	gnl\|CDD\|273212	TIGR00676, 510-methylenetetrahydrofolate_reductase., 5,10-methylenetetrahydrofolate reductase, prokaryotic form. The enzyme activities methylenetetrahydrofolate reductase (EC 1.5.1.20) and 5,10-methylenetetrahydrofolate reductase (FADH) (EC 1.7.99.5) differ in that 1.5.1.20 (assigned in many eukaryotes) is defined to use NADP+ as an acceptor, while 1.7.99.5 (assigned in many bacteria) is flexible with respect to the acceptor; both convert 5-methyltetrahydrofolate to 5,10-methylenetetrahydrofolate. From a larger set of proteins assigned as 1.5.1.20 and 1.7.99.5, this model describes the subset of proteins found in bacteria, and currently designated 1.7.99.5. This protein is an FAD-containing flavoprotein. [Amino acid biosynthesis, Aspartate family].	1.97097e-85
CP016343.1\|AUI73331.1\|266160_267522_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	9.30512e-156
CP016343.1\|AUI73329.1\|261866_262712_+\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	3.296e-83
CP016343.1\|AUI73326.1\|259042_260413_+\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	7.35584e-141
CP016343.1\|AUI73339.1\|283383_284244_+\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	3.61741e-143
CP016343.1\|AUI73333.1\|271949_272192_+\|hypothetical-protein	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	1.74751e-32
CP016343.1\|AUI73332.1\|271578_271827_+\|hypothetical-protein	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	3.89008e-38
CP016343.1\|AUI73337.1\|275979_277677_+\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
CP016343.1\|AUI73323.1\|257516_257846_-\|hypothetical-protein	gnl\|CDD\|340873	cd17315, MFS_GLUT_like, Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily. This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.78296e-16
CP016343.1\|AUI73327.1\|260409_261381_-\|glucokinase	gnl\|CDD\|234716	PRK00292, glk, glucokinase; Provisional.	2.56707e-124
CP016343.1\|AUI73330.1\|262689_264291_+\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0

>CP016343.1|AUI73330.1|262689_264291_+|glutamine--tRNA-ligase
MIKKNIIDYLSKDSKFRSLFKKNFITRFSPEPNGCLHLGHVKSIWVNCSLAKVLNGNCYIRFDDTNPIKENKIYITSVLEDIHWLGFKFKNINYASNYFNKLFEWALLLIKQGKAYIDDLSISEIKQYRGDFKSVGYNSPYRKRNIKDNIFFLKKMYKGFVKEGKKVLRAKIDMNSKNINLRDPIMYRIINVYHYRTGNYWKIYPSYDFTHGQSDLLEGITHSICTLEFETNRYLYQWFLKNIFNDYFKYPKQIEFSRMNISFSLTSKRKIKLLIDKNFIFGWDDPRLSTISGMRRRGYTPTSLKNLCKITGITRSNNNIDIHLQYYAIRSDLENKVIRVMCVINPIKLILTNLIVDYEEIITVKNHPFIEMGARSMYFNREIWIDLKDFNNKQNLFRLSKGKNVRLRHSYIIKCKKFVFFKNEQIKEIQGIVCLNSKHKNIEGKIFKGVIHWVSVKHSVPVLIRLYNSLLHKNIVNNNSLFFTDSIGEPIFSHIKPETRVQFERIGFFCADRYDFNQTNFVFNEIISLKTFI
>CP016343.1|AUI73329.1|261866_262712_+|shikimate-dehydrogenase
MEKKISCVFGKPIKHSMSPILHNSFGKKNNICLYYKAINIRNKILLKKEWINFVICGGIGVNITIPYKQYAIKLANKLSYRAKIAGAVNTLIINKKNIFGDTTDGVGLIRDLNRLNINLLNKRILLLGAGGAVNSVIQQVLDLGPNKIYLVNRTLLKCKDIRNRFNLKNIIQFCSYDELKNKNAFDVIINGTSLSIKKDKINFNNNAFKTTIAYDLMYSKYITKFLKFAKNNNAKIYDGLGMLIEQAAETYFLLNNIRPKIKNLHKNIRNLLNNNDKKKYY
>CP016343.1|AUI73328.1|261386_261842_-|peptide-deformylase
MNILKYPDKRLKILAKPIKLINYKIRTLIFKMLNTMYAHNGIGLAATQINKHIRIFVMDISKNYNQPLIIINPKYIYVSTTYKKVKEGCLSIPNYFEYIYRSINIIIKAIDINGNKFIINASGLLSQCIQHEIDHLNGKLLIDNLSNKQKG
>CP016343.1|AUI73327.1|260409_261381_-|glucokinase
MNHLALVGDIGGTNVRLALALVSTNQLKLYKIKIFKCINYLNVYEVIKQYISLVGCDYPKQACLAFACPVNSNFIKMTNNSWTIAKYELKHKLNLQKLKIINDFTAIALGLTHIQAKDLYKLGYGKTNNNSNKILIGPGTGLGIAGLIHTKNSWIPFSGEGGHISFAPIDNFEVYILNWFQNNYKRVSIERILCGQGIVDLYYAHVNYYINHSYNVLTTPDAITKAALKKNDPLAYKTILMFCKLLGHVTGDMALTLGAKGGVYLCGGILPRIIKILDNSDFRNSFDNKGRMSFYNKEISTWLVKSKWIGLLGSADALFNNKL
>CP016343.1|AUI73326.1|259042_260413_+|glucose-6-phosphate-dehydrogenase
MKIIVKNITSLSLILFGALGDLALRKLYNSLFILYKKNIINKKINILCLARKVETLNTFRYTIYKRLIKANYINNKRDLVKLINFINCLYYLNIDFTTLTHFKFLKKKNQNQNLKNNLSKLVYFAVSSNIFKIICKYLNLNKQLTKTAKIILEKPIGCNLKSSININNYINNIYFERSIFRIDHYLGKRQVKNLLSLRFLNPVFYMLWNKKYITHIVIKLAEHLGIEDRWGYFDKTGQLRDMVQNHLIQLLSMITICIPKTKQISVKNIYKEKIKILKDLNNSFLTVDIKYGQYISNKLKNKIYNGYLEEKNSNKNSSTETFVYIKTKINNFHWYGIPFFLMSGKRLKQKLSQIKIYLKKNSLNNDLNNKLIINLQPKEDINLNKFKIKQMSLNKNNYLDSYEFLILEVIKGKQDWFVSKEEIDYSWRWIEKVIHIWKQKNLPIFYYKSFTWGPIG
>CP016343.1|AUI73325.1|258766_258979_-|hypothetical-protein
MEISSMLNFFTHKPQNKKSTKRHNEQSTKPQHKLLIINKNKINIIAKTKIENKIYNIYHTTVTKLIPLKK
>CP016343.1|AUI73324.1|257955_258156_+|hypothetical-protein
MLLKFSLSSLLTSNLDALKLCKSFMASRFLFVEASHLGLAGINNMQKNKSIEGTIKSSNILLQFCK
>CP016343.1|AUI73323.1|257516_257846_-|hypothetical-protein
MNVLINFYGFTGTKPQLLSTLTVGLVNVLSTIVAIILVDKVGIKPILYFCFTIMAIGIALLSLILYTRTLHFIQFLSIFSLLIFVAGFAMSAGPIIWILCAEIQQVYGR
>CP016343.1|AUI73322.1|256448_257279_+|5,10-methylenetetrahydrofolate-reductase
MKKNEVEISFEMFPQKEHYKTKSFIKKIKQLYKKKDIKFCSITYGAGGSNKKNTLEIIKNIKKQKIECVPHLACITTKEKDLIKTLKSYKKIGIKKILALRGDIKTNTKTKFINSLDLLTLIKKNFYKNFEVIVTAYPEMHPNTISFEKEVCFVIKKFMFGANKAITQYFYDPDSYFYFVEKVRKYGVEKHIIPGIMPISNVNNLKKKKKKCGANIPKWIYKKLEFCKTDNDIEHIGNDIVIKLCETLIKGGAPGLHFYTLNKLEPTLNILNSLIT
>CP016343.1|AUI73321.1|251386_252685_-|glutamate/aspartate:proton-symporter-GltP
MKIIQSKNLALKIIIGLCFGIITGLILHQNNYIKSWVLINVLQPLGEIFIRLIKMIVVPIILTSLIIGISGIDNTKNLSRIGLKTILYFELVTTLAILVGLISANIFKPGYGINMSSLSNNIDLSQYKYFSNSIQKKEHTNILNIIVELIPSNIFQSFVTGNILSIIFFSVIFSLGLSGLPFKNKNLFINIIKTISETMFNVTSIIMRFSPIGVFSLISNTVANFGVLSLIPLIKLVVLVYFTIIFFIFIILGSIAWFFGFNILILLHILKDEILLAFTTSSSESVLLNLMAKLENYGAPKTICNFVIPTGYSFNLDGSTLYQSIAALFIAQLYGIKLTLFTQLTLILTLMITSKGIAGIPGVSFVVLLATLGSIGIPIEGIAFIAGVDRILDMARTVLNVVGNALAVLIVSKWENQYDTSKGLRYYKHKKV
>CP016343.1|AUI73331.1|266160_267522_+|cysteine--tRNA-ligase
MYIYNTLKKNKELLVPINLNKLKIYVCGSTVYDYCHIGHGRNMFIYYFFYKYLKHRGYILKYIRNITDIDKKIIKKSIKTNENTKILTQRIINSIHKDEKKLGLLAPDCEPKVSDYKNIIIYYINKLLKNDFAYIKKGNVFFKIKTHKLYGMLSNQTIKNFNFFLSKNFSKYKKYKLDFSLWKKSQYKFGWASPWSVGFPGWHIECSVLSKIYLGNKFDIHGGGLDLIFPHHENEKAQSELLFCKPHVNLWVHSGHLNVNNKKMSKSLHNTILVRYIIIKYNNEVINFFFLITHYRKSINFTIDQLDIVLNLLNHILYKIICITPKRQKYNNVFYNQIILALENDFNTVKAISILFNLLYKTKKAFKLGKIKKSQSLCFELIRLGKILGILKSLKKIKPQILFNINKVGSLILKRNIYKKETNFLQSDKLRISLTVFDIFIQDTIKRTFWLNR
>CP016343.1|AUI73403.1|271347_271566_+|ATP-dependent-Clp-protease-proteolytic-subunit
MRLLKERIIFIVGNIEDNKANLIVAQLLSLEYENPKKDINLYINSPCGIVTTGLSIYDTMQYVKPDVATICI
>CP016343.1|AUI73332.1|271578_271827_+|hypothetical-protein
MAAIIKSGGNKGKRFCLQNARIMIHQPNVKKKGQASDIEIHTKEIISIKTKLNKILSQNTGQNIEKIKIDTDRNNFMDAKMA
>CP016343.1|AUI73333.1|271949_272192_+|hypothetical-protein
MKKIYCSFCEKPQAEVKKFIAGKSIYICNECIDLCNEVFKEETRNVEFEFVLPKPKIFYNCLDKYIIGQKRAKLVLSVAV
>CP016343.1|AUI73334.1|272273_272519_+|Clp-protease
MFAETLALLLLVHFTIADATSLTEACYVGDDVEIIIQNLLQKCDYNIDKAQNCIVYIDEKIIKYVYYKRCYTTNVQKTRYK
>CP016343.1|AUI73335.1|273117_274500_+|cardiolipin-synthase
MKYIKTFLNIILFCFLLSSIIIALFMSRTPQSAIAWLISLITVPYFSIPMFWLLSCPNFCGYLIKKNSLHIKKFKNTFTINCNVQVVEKLSSMPLTQSNFVKLLINGYITFKSMFDGIKRAKKYILIQFFIIKNDKLGQEFKNSLIYSAKKGVNIFVIYDQIGSHNLSKSFIKEFKKAGINLLKFGFCKGWKNLLKINFCNHRKLILIDGKEAWIGGLNIGNEYLGINKKIGYWRDTHLHIIGPSVLCLQEIFLEDWFWSTDTKIHNLNWKPILSNIKKKHIIVVPSGPITNRNNASLLIQNSINIAKQRFWITSPYFIPDQSVIDSLKLAALRGVDVKIIIPERTDHLFVYLSTFSYFSELIRVGVKFYKYIKGFLHQKVMLIDNHTASVGTINLDNRSFRLNFEITAYIIDGDFAKDVKYMLQQDLLYCNLIHLNEINCRSLINKLLSKSAFLASPIQ
>CP016343.1|AUI73336.1|274532_275879_-|magnesium-transporter
MKKNNIIPNLWKALSNKNYKEIKSLLKYFRSADIAEMISRTSNKLIIQILNSQSSKRKADIFSYLPKDKQFEITKELNNEEIIKIFVKMNSDDSADVFNMFEPIRRENILRSMANKVRENLIKLSSYEDGTAGAIMTSNYVVIPENITVLQALNQIKQTAPDAETIYQIYVLDQDQKLTGTLSLRQIILANPIALIKDLMIKDVIYVHTNSKQEYVTKMISHYDFLAIPVINSEHKLVGIITYDDAMDVVERETTDDFHKSGSVGTLEYNIVRTNLLTLYSKRIFWLVLLIFGNLFSGAGIAKYEDTISSKISLVFFLPLLIGSGGNAGSQASTLMIRGLGTGEINIKDWAKLMSKELLVSGILGITMAIVIFPIGYIRGGIEVAYSVAISMIIIVIIGSLLGMSLPFCLNRLGFDPAAASAPLVATLCDSLGVLIFFSIATIILNVK
>CP016343.1|AUI73337.1|275979_277677_+|aspartate--tRNA-ligase
MRINYCGKVNQTLLNSYVKLYGWVNKIRDHGGILFLDLRDMYGRTQLVIDSKKLDFTNFVLAKKLKSEYIIKVIGLIKLRPVKDGFTNKIDIFVIELNLLSKSIKLPFKLYAKKKIKEEIRFKFRYIDLRQKKYIKKILIRSQIIHKIRSFLDINKFIEIETPILSNITVEGARTFIIQSHKQTFALPQSPQIYKQILMCSGLDRYYQIAKCFRDEDLRSDRQPEFTQIDIETSFMNKQAIINVVEKMIKSLFKELLHFTFSSAFKIIKYTDAINKYGTDKPDLRVPIKITDIEDVIPQSLTCIFLNKLHKLTSQCNRIAAIKLKGGVCLSLKQIIKYISFVKLYGAKGLIWIKVYNINLGLNGLQSPILKHITDEVIHNLKKRLHLKNGDLVFCCADTINIVNTSLSVLITQIANDLKLYIKAWAPIWVVNFPLFKRDIVGTLTSYHHPFTAPTSTLDDIIYNPEKAFANSFDLIINGIELGGGSIRINDYKIQKIIFKLLGLTQRTLNNNFGFFLKAFKFGVPPHGGLALGLDRIVMLLTKSDNIRDVIAFPKTNKFICPLSV
>CP016343.1|AUI73338.1|278986_279430_+|peptidoglycan-binding-protein
MIKKYMLKRLILAISLLLVLKNNNVILNEIKLNKFFIFNKAPFIKTIYFNYDLYYFSNKINNILKQYVIYIRNNPSKQLLLKINTNVLGNIKYNFILNKSRMSFIVNNLVLNGIHKNNIKYIICVKNKKVYNELNTLNNNKLIVNIL
>CP016343.1|AUI73339.1|283383_284244_+|lipoyl-synthase
MRHKPSWIKIRVPLYNEINNIKNKIRKTYLHTVCEESSCPNILNCFNEKIATIMILGNKCTRKCPFCDVLYGKPIKINYYEPFDIIKILIKLKINYIVITSVNRDDLEDGGANHFSKCIGAINRLYKHIKIEILIPDFRGKSDIAINILIKNKPTVLNHNIETIHNLYLQVKPGATYDISLNLLKQIKKYCPKIKTKSGLMVGIGENDKQLINVIKDIKTNQVDIITIGQYIAPSNFHLPIKRWVHPTSFYFYAKLCYILGFNYIASGPLIRSSYKAKNQNYGKNI

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Crispr_ID: CP016343_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP016343_3

285481-285570

Orphan

Consensus_repeat	Method
AAGGATAAAAAAAAAGAAAGGTGTGTAATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP016343_3

>merge|CP016343|3|285481-285570|CRISPRCasFinder
AAGGATAAAAAAAAAGAAAGGTGTGTAATGGTAATGTTGTGAGAAAGGTTAAGGAAGTAAAAGGATAAAAAAAAAGAAAGGTGTGTAATG

>CP016343|3|3|285481-285570|CRISPRCasFinder
AAGGATAAAAAAAAAGAAAGGTGTGTAATG	GTAATGTTGTGAGAAAGGTTAAGGAAGTAA
AAGGATAAAAAAAAAGAAAGGTGTGTAATG

Protein	Signature genes	Signature genes Name	Protein_function
CP016343.1\|AUI73336.1\|274532_275879_-\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
CP016343.1\|AUI73338.1\|278986_279430_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|274307
CP016343.1\|AUI73349.1\|302429_303671_+\|acetylornithine-aminotransferase	unknown	unknown	gnl\|CDD\|179933
CP016343.1\|AUI73403.1\|271347_271566_+\|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl\|CDD\|178955
CP016343.1\|AUI73346.1\|298107_298296_-\|ferredoxin	unknown	unknown	gnl\|CDD\|224066
CP016343.1\|AUI73335.1\|273117_274500_+\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
CP016343.1\|AUI73331.1\|266160_267522_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
CP016343.1\|AUI73345.1\|297304_298111_+\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
CP016343.1\|AUI73340.1\|286246_287500_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
CP016343.1\|AUI73339.1\|283383_284244_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
CP016343.1\|AUI73333.1\|271949_272192_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235422
CP016343.1\|AUI73342.1\|290054_292655_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
CP016343.1\|AUI73348.1\|299609_302258_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
CP016343.1\|AUI73332.1\|271578_271827_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178955
CP016343.1\|AUI73343.1\|292651_293128_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|223396
CP016343.1\|AUI73344.1\|296117_297299_+\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
CP016343.1\|AUI73347.1\|298298_298862_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789
CP016343.1\|AUI73337.1\|275979_277677_+\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
CP016343.1\|AUI73334.1\|272273_272519_+\|Clp-protease	unknown	unknown	gnl\|CDD\|235422
CP016343.1\|AUI73341.1\|287499_288552_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234701

Protein	Function_ID	Function_description	E-value
CP016343.1\|AUI73336.1\|274532_275879_-\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	1.09907e-125
CP016343.1\|AUI73338.1\|278986_279430_+\|peptidoglycan-binding-protein	gnl\|CDD\|274307	TIGR02802, Peptidoglycan-associated_lipoprotein, peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.	0.00287501
CP016343.1\|AUI73349.1\|302429_303671_+\|acetylornithine-aminotransferase	gnl\|CDD\|179933	PRK05093, argD, acetylornithine/succinyldiaminopimelate transaminase.	0
CP016343.1\|AUI73403.1\|271347_271566_+\|ATP-dependent-Clp-protease-proteolytic-subunit	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	4.0643e-46
CP016343.1\|AUI73346.1\|298107_298296_-\|ferredoxin	gnl\|CDD\|224066	COG1143, NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion].	2.20945e-05
CP016343.1\|AUI73335.1\|273117_274500_+\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	4.70969e-172
CP016343.1\|AUI73331.1\|266160_267522_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	9.30512e-156
CP016343.1\|AUI73345.1\|297304_298111_+\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	4.1465e-115
CP016343.1\|AUI73340.1\|286246_287500_-\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	1.38391e-161
CP016343.1\|AUI73339.1\|283383_284244_+\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	3.61741e-143
CP016343.1\|AUI73333.1\|271949_272192_+\|hypothetical-protein	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	1.74751e-32
CP016343.1\|AUI73342.1\|290054_292655_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
CP016343.1\|AUI73348.1\|299609_302258_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
CP016343.1\|AUI73332.1\|271578_271827_+\|hypothetical-protein	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	3.89008e-38
CP016343.1\|AUI73343.1\|292651_293128_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|223396	COG0319, COG0319, Predicted metal-dependent hydrolase [General function prediction only].	1.01423e-21
CP016343.1\|AUI73344.1\|296117_297299_+\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
CP016343.1\|AUI73347.1\|298298_298862_-\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	3.10726e-111
CP016343.1\|AUI73337.1\|275979_277677_+\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
CP016343.1\|AUI73334.1\|272273_272519_+\|Clp-protease	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	2.21046e-29
CP016343.1\|AUI73341.1\|287499_288552_-\|hypothetical-protein	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	1.63209e-34

>CP016343.1|AUI73339.1|283383_284244_+|lipoyl-synthase
MRHKPSWIKIRVPLYNEINNIKNKIRKTYLHTVCEESSCPNILNCFNEKIATIMILGNKCTRKCPFCDVLYGKPIKINYYEPFDIIKILIKLKINYIVITSVNRDDLEDGGANHFSKCIGAINRLYKHIKIEILIPDFRGKSDIAINILIKNKPTVLNHNIETIHNLYLQVKPGATYDISLNLLKQIKKYCPKIKTKSGLMVGIGENDKQLINVIKDIKTNQVDIITIGQYIAPSNFHLPIKRWVHPTSFYFYAKLCYILGFNYIASGPLIRSSYKAKNQNYGKNI
>CP016343.1|AUI73338.1|278986_279430_+|peptidoglycan-binding-protein
MIKKYMLKRLILAISLLLVLKNNNVILNEIKLNKFFIFNKAPFIKTIYFNYDLYYFSNKINNILKQYVIYIRNNPSKQLLLKINTNVLGNIKYNFILNKSRMSFIVNNLVLNGIHKNNIKYIICVKNKKVYNELNTLNNNKLIVNIL
>CP016343.1|AUI73337.1|275979_277677_+|aspartate--tRNA-ligase
MRINYCGKVNQTLLNSYVKLYGWVNKIRDHGGILFLDLRDMYGRTQLVIDSKKLDFTNFVLAKKLKSEYIIKVIGLIKLRPVKDGFTNKIDIFVIELNLLSKSIKLPFKLYAKKKIKEEIRFKFRYIDLRQKKYIKKILIRSQIIHKIRSFLDINKFIEIETPILSNITVEGARTFIIQSHKQTFALPQSPQIYKQILMCSGLDRYYQIAKCFRDEDLRSDRQPEFTQIDIETSFMNKQAIINVVEKMIKSLFKELLHFTFSSAFKIIKYTDAINKYGTDKPDLRVPIKITDIEDVIPQSLTCIFLNKLHKLTSQCNRIAAIKLKGGVCLSLKQIIKYISFVKLYGAKGLIWIKVYNINLGLNGLQSPILKHITDEVIHNLKKRLHLKNGDLVFCCADTINIVNTSLSVLITQIANDLKLYIKAWAPIWVVNFPLFKRDIVGTLTSYHHPFTAPTSTLDDIIYNPEKAFANSFDLIINGIELGGGSIRINDYKIQKIIFKLLGLTQRTLNNNFGFFLKAFKFGVPPHGGLALGLDRIVMLLTKSDNIRDVIAFPKTNKFICPLSV
>CP016343.1|AUI73336.1|274532_275879_-|magnesium-transporter
MKKNNIIPNLWKALSNKNYKEIKSLLKYFRSADIAEMISRTSNKLIIQILNSQSSKRKADIFSYLPKDKQFEITKELNNEEIIKIFVKMNSDDSADVFNMFEPIRRENILRSMANKVRENLIKLSSYEDGTAGAIMTSNYVVIPENITVLQALNQIKQTAPDAETIYQIYVLDQDQKLTGTLSLRQIILANPIALIKDLMIKDVIYVHTNSKQEYVTKMISHYDFLAIPVINSEHKLVGIITYDDAMDVVERETTDDFHKSGSVGTLEYNIVRTNLLTLYSKRIFWLVLLIFGNLFSGAGIAKYEDTISSKISLVFFLPLLIGSGGNAGSQASTLMIRGLGTGEINIKDWAKLMSKELLVSGILGITMAIVIFPIGYIRGGIEVAYSVAISMIIIVIIGSLLGMSLPFCLNRLGFDPAAASAPLVATLCDSLGVLIFFSIATIILNVK
>CP016343.1|AUI73335.1|273117_274500_+|cardiolipin-synthase
MKYIKTFLNIILFCFLLSSIIIALFMSRTPQSAIAWLISLITVPYFSIPMFWLLSCPNFCGYLIKKNSLHIKKFKNTFTINCNVQVVEKLSSMPLTQSNFVKLLINGYITFKSMFDGIKRAKKYILIQFFIIKNDKLGQEFKNSLIYSAKKGVNIFVIYDQIGSHNLSKSFIKEFKKAGINLLKFGFCKGWKNLLKINFCNHRKLILIDGKEAWIGGLNIGNEYLGINKKIGYWRDTHLHIIGPSVLCLQEIFLEDWFWSTDTKIHNLNWKPILSNIKKKHIIVVPSGPITNRNNASLLIQNSINIAKQRFWITSPYFIPDQSVIDSLKLAALRGVDVKIIIPERTDHLFVYLSTFSYFSELIRVGVKFYKYIKGFLHQKVMLIDNHTASVGTINLDNRSFRLNFEITAYIIDGDFAKDVKYMLQQDLLYCNLIHLNEINCRSLINKLLSKSAFLASPIQ
>CP016343.1|AUI73334.1|272273_272519_+|Clp-protease
MFAETLALLLLVHFTIADATSLTEACYVGDDVEIIIQNLLQKCDYNIDKAQNCIVYIDEKIIKYVYYKRCYTTNVQKTRYK
>CP016343.1|AUI73333.1|271949_272192_+|hypothetical-protein
MKKIYCSFCEKPQAEVKKFIAGKSIYICNECIDLCNEVFKEETRNVEFEFVLPKPKIFYNCLDKYIIGQKRAKLVLSVAV
>CP016343.1|AUI73332.1|271578_271827_+|hypothetical-protein
MAAIIKSGGNKGKRFCLQNARIMIHQPNVKKKGQASDIEIHTKEIISIKTKLNKILSQNTGQNIEKIKIDTDRNNFMDAKMA
>CP016343.1|AUI73403.1|271347_271566_+|ATP-dependent-Clp-protease-proteolytic-subunit
MRLLKERIIFIVGNIEDNKANLIVAQLLSLEYENPKKDINLYINSPCGIVTTGLSIYDTMQYVKPDVATICI
>CP016343.1|AUI73331.1|266160_267522_+|cysteine--tRNA-ligase
MYIYNTLKKNKELLVPINLNKLKIYVCGSTVYDYCHIGHGRNMFIYYFFYKYLKHRGYILKYIRNITDIDKKIIKKSIKTNENTKILTQRIINSIHKDEKKLGLLAPDCEPKVSDYKNIIIYYINKLLKNDFAYIKKGNVFFKIKTHKLYGMLSNQTIKNFNFFLSKNFSKYKKYKLDFSLWKKSQYKFGWASPWSVGFPGWHIECSVLSKIYLGNKFDIHGGGLDLIFPHHENEKAQSELLFCKPHVNLWVHSGHLNVNNKKMSKSLHNTILVRYIIIKYNNEVINFFFLITHYRKSINFTIDQLDIVLNLLNHILYKIICITPKRQKYNNVFYNQIILALENDFNTVKAISILFNLLYKTKKAFKLGKIKKSQSLCFELIRLGKILGILKSLKKIKPQILFNINKVGSLILKRNIYKKETNFLQSDKLRISLTVFDIFIQDTIKRTFWLNR
>CP016343.1|AUI73340.1|286246_287500_-|aspartate-kinase
MGIIVQKFGGTSVGSIKNIKNIAKQISFFYKKQHKIIVVVSAMSGETNRLLCLAKLMYKKKTINDIYNHRELDVLLSTGEQVTMSLLSIALNLVGVKSKSYTGAQLSIFTDSVYTKARIQHIDTSVINKDINNNIVVVVAGFQGIDKYGNITTLGRGGSDTTAVAISTAINADECQIYTDVSGVYSTDPRLCNNSSLISYITVEDMLELSSLGSKVLQIRSVEFAVKSNMPVRLLSIFDNNPGTLLIQKRSFLEKKMENPLISGVTYNCNIENITVIVSCEVFPYVCYNLLIFFSDHKIDICIQNIKNLTTQFVITFTISKSDYNLLFHTIQKYICIYLGGHILADNKSVIISIVGVGIYSHKCILHNVVYTLEKHGIIILFLSTSELKLSIFVFDDYMDLALHVLHTTLNLNNLVQ
>CP016343.1|AUI73341.1|287499_288552_-|hypothetical-protein
MIKHNSLFFHVGTLLKGYFSNTTHVKCYIDKIIRYNISVAHSAIHLLNVTIQRVAKNKLIKKGFFINQNKIIFEYKSYKPLTNKILFIIELLINRAIAKQHIILIKLLSKQKKNIKHKNVVVIGKEGGYSIDVCNGTHIKTTKNIGCFCIMSEQCVSKGIRRIEAVTNKNAVRYILNNKLTLKDLSFASNLCLNNVKKNIKHLKNKNKVLLDEFNLFKQITIQKQINKLLSKMFYFFGYKFLIYKIKSKYKKDLFVILHSIVNKLVNKSIIIVYVLNKHNINVFIKITNDCLKFRPYSVFFKQVLQTNKTIFYNATTNVSYLKTSINNFNMLYTKTLKTNIKTFLLKRGL
>CP016343.1|AUI73342.1|290054_292655_-|leucine--tRNA-ligase
MMYPFNYKQIELEAQNFWYNHNCFEIVEMPNKEKFYCLCMFPYPSGNLHIGHVRNYTIGDVISRSQRMLGKNVLNPIGWDAFGMPAENAAKKNIVSPTDWTNSNIYYMYNQLKSLGFSYNWERKITTCKIDFYRWEQWFFIKLIEHGVIYKNNAIINWDPLEKTILANEQVINGIGWRSGAKIEHRKIPSWFLKITDYAYELLRGLANIDWPESVKKMQINWIGKYKGIEVSFKVIGSVPNCYSYLKVFTQRPDTLFGVTYILLAPDHHLVELAAQYNYQIKKLCNTFKICGKCSLAILKNKELGLYVGYNVLHPITNEILPLYVSSFRYFEYGATASMGVPAHSHRDWDFANTYGLPFKTVVSDINGKVPDISKNAYTDFGFIINSGIFNNITCFEAFDYIFSFIKQYKSGVVKQKLKLRDWGISRQRYWGTPIPVKYGITGKPTPLTDEEIPVYLPKHVCLNSKFNLKKIPSFYVLGNGWVRDTETFDTFIESSWYYARFCCTDNNHSILDARVNYWLPVDMYIGGIEHAILHLMYARFFHKLMRDFGLVDCDEPFKKLITQGMVLTYTYYRESFGIKEWFNPLDVCLLKEKKNGNIIPTVKRDGGIVIRNGIEKMSKSKNNGIDPNVLINRFGADTLRLFVMFSAPTEQVLIWSESGIIGSSRFIKRLWNIVHTYIYISGSEHTIIKLSSLRPDQFNLYRQLQKTIKKATSDMIGRHVFNTVISTVMKLTNLVSHFIDIDSSIIGLAVTREALKSIILILAPIVPHITHVLWKVLGFSYAVIDATWPSYNKHCMLGHLFTVLAQINGKIRKEIKLPLNYHTKTFASTILSSISIKGYLNCKEIHTLIFVHAKVINIVYKSSMF
>CP016343.1|AUI73343.1|292651_293128_-|rRNA-maturation-RNase-YbeY
MKKKIKCVYVHMQFIKNNTIKKIVPNESLLSSLFYSFLKPKYKPYKDIVFNIRFVEYKEIIGLNSYYRGFNSLTNIISFSYEALSQRINIQLLGELVITPTLLLYESFKMNKAFIDHCAHIIVHGLLHLIGYNHKNVTDADNMENIEYSNFNKTNIHL
>CP016343.1|AUI73344.1|296117_297299_+|tryptophan-synthase-subunit-beta
MNIIPNHKGLFGNFGGRFVSETLIPLIIELEKTYKTAKKDESFRKELAYYQKTYIGRSSPLYLADRLTQALGGAKIYFKREDLNHTGAHKINNCIGQILLAKRLGKNRIIAETGAGMHGVATATVAARLGMKCVIYMGSTDVKRQKENVYRMKLLGAKVVPVNSGKGTLKDAMNEALRDWVNNIETTFYIIGTVAGPHPYPLIVRDFQSVIGNEVREQIIKIEGKLPDILVACIGGGSNAMGLFFPMIKDNTVRMIGVEAGGHGIETGKHAASLNGGVPGVIHGNRTYILQNKDGQIKDAHSISAGMDYPGIGPEHSYYYKCKRIDYVSVTDKEAIEAFKKCCYLEGIIPALESAHALAYVTKIAHSLSNKTTIVLNMSGRGDKDISIIREHS
>CP016343.1|AUI73345.1|297304_298111_+|tryptophan-synthase-subunit-alpha
MKLNKRIINCFEQKKRAAFVTFITAGDQDYEKSLTLINSLPKAGADIIELGMPFTDPIADGEIIQKSTQRSLKTGQNQKKTLELVKAFRLFNKKTPIILMGYYNPIYRYGIKKFIKDAKKAQIDGLIIVDLPPEHAQEVSVPAKKQGIDFINIITPNTNIKRIPFIVKNSSGYIYYISINGVTGGSVPIFYEVEKAVKLIRKYTNLPIAVGFGVKNRNSVKKLANISDAVVVGSALLKQIEIHCYDQKTAISNVLNLTSRLSRGLVKI
>CP016343.1|AUI73346.1|298107_298296_-|ferredoxin
MSLLITTDCINCDMCELVCPNNAIFPGEEVYVINHDLCNECIGVFPHPQCQQVCPVACIVQP
>CP016343.1|AUI73347.1|298298_298862_-|peroxiredoxin
MAIINKKIRPFTATAYLNGKFINISNEDLQGKWSVIFFYPADFSFVCPTELLDLSENYSTFKTLGVEIYSVSTDTHFTHKAWHDSSFTVSKIKFPMIGDPSGNISRSFNVFVAETGLAERSTFVIDTECKIKLAEYNAIGIGRNSKELIRKIQAAQYITNHPNEVCPANWTDGSKTFKQNIDFVGKF
>CP016343.1|AUI73348.1|299609_302258_-|valine--tRNA-ligase
MKYNNWHKNWETTKRLLNTYTSVPFSIMIPPPNVTGKIHIGHAFEYTLIDTIIRQKGMQGYKTLLQFGTDHAGIATQLLMDKKLSHDKVNRMFLGRKLFLKKTLQWCNKTIPKIILQMKSIGMSVDWKKERFTMDYGFYQAVQEAFIKLYKEGLIYRGKRLINWDPNLLTALSDIEVKNLQDLGKLWYIRYHLFNLHNVEAFCQKKAYLIVATTRPETIFADTCIAVHPFDKRYKAFIGKCVVLPLIGRILPIISEEVVDIKFGTGCVKITPAHNLIDYKIGKRQNSLFINMFNNRFKVRQKAEVCILKSGILLKYNLIKLPKVYVGLSIKSLRKNIVKDLLKNKFLEKKVDNHLLMLPCGDRSCAIIEPLLTDQWFVSIKNLANLAINAVKNGNITFIPKNYEKIYINWMYNLKDWCISRQLWWGHRIPAWYDKNNIIFVGRNEEEIRSKYAINFKTKLNQDQDVLDTWFSSGLWTFTTIGWPQIRTKSFNLFHPSSVLITGFDIIPFWVSRLIMMTLKLINELPFKRIFIHGLIRDKQGQKMSKSKGNVIDPIDVINGINYGADALRFTFLSISLPGKNINFDLRRFKGYMNFCNKIWNATRFVLSKIELFYNNEYNQFCCWENVTSINKFIISSLQNTKRKILLYFDEYRLDLASQTIYEFFWYDFCDLYLEITKIVFNSNYIGVKISTINTLLYVFKEILLLLHPFIPYITDEIWINIMQVQYKNKHITTTILNQDLPKIDINKLDDNAIYDVNFINIFITKLRCIRSLIYLNKSIKLTVFCSKVKLFYKSLINKYKIYICNLANINIIKYSEPCINCVSKKNQQFFILHIPLLSFCQRNYLVEELQKKKQLLKLSCLKINLKLNTKTSFTAITTNKK
>CP016343.1|AUI73349.1|302429_303671_+|acetylornithine-aminotransferase
MSINPKTKFKDFYKYILPLYSPQNKIPVKGYGSTIWVQDGRDYIDFSGGIAVNALGHSNPILLEALKEQSKKVWHVSNSYTNEPSLCLAKKLVKNTFADKVFFCSSGAEANEAALKLSRRYAYNHFGSKKNIIISFKKSFHGRTFFTVNVGGKNNYSHGFGPSPFCIIHAEFNNIHNFRKVINNYTCAVIIEPIQGEGGINVANYSFLKQLRNLCKIYNALLIFDEVQCGMGRIGKLFTYMHFKIKPDIITLAKSIGCGFPLAAMLTTNKVGEAFSIGVHGSTYGGNPLACAVGNIAFDVISNKEVLSGVKRKNKLLKQHIKRINLEFNIFKEVRGLGLLIGIELNKNYINIGRKILKVAFENGLMLLNAGPNVLRLAPSLLISIEEIEEGMSRLYTTIKCIKQNFKYLEYLC

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Crispr_ID: CP016343_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP016343_4

305624-305717

Orphan

Consensus_repeat	Method
TTTTTTTTCGTTCATTATTCTTTTAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP016343_4

>merge|CP016343|4|305624-305717|CRISPRCasFinder
TTTTTTTTCGTTCATTATTCTTTTAACTTTTTTCTATTGCTTTGATCTATTTCGCTGTTACTAAATCTTTTTTTTCGTTCATTATTCTTTTAAC

>CP016343|4|4|305624-305717|CRISPRCasFinder
TTTTTTTTCGTTCATTATTCTTTTAAC	TTTTTTCTATTGCTTTGATCTATTTCGCTGTTACTAAATC
TTTTTTTTCGTTCATTATTCTTTTAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP016343.1\|AUI73359.1\|316978_317158_+\|hypothetical-protein	unknown	unknown	unknown
CP016343.1\|AUI73357.1\|314677_315700_+\|anthranilate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234682
CP016343.1\|AUI73342.1\|290054_292655_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
CP016343.1\|AUI73349.1\|302429_303671_+\|acetylornithine-aminotransferase	unknown	unknown	gnl\|CDD\|179933
CP016343.1\|AUI73354.1\|311025_311793_+\|chromosome-partitioning-protein	unknown	unknown	gnl\|CDD\|378455
CP016343.1\|AUI73352.1\|308014_308305_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
CP016343.1\|AUI73351.1\|306344_307979_-\|chaperonin-GroL	unknown	unknown	gnl\|CDD\|234573
CP016343.1\|AUI73343.1\|292651_293128_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|223396
CP016343.1\|AUI73404.1\|318117_318672_-\|50S-ribosomal-protein-L25	unknown	unknown	gnl\|CDD\|235534
CP016343.1\|AUI73345.1\|297304_298111_+\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
CP016343.1\|AUI73341.1\|287499_288552_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234701
CP016343.1\|AUI73356.1\|314093_314672_+\|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl\|CDD\|235552
CP016343.1\|AUI73348.1\|299609_302258_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
CP016343.1\|AUI73358.1\|315699_316518_+\|indole-3-glycerol-phosphate-synthase	unknown	unknown	gnl\|CDD\|234710
CP016343.1\|AUI73344.1\|296117_297299_+\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
CP016343.1\|AUI73353.1\|309613_309928_-\|monothiol-glutaredoxin,-Grx4-family	unknown	unknown	gnl\|CDD\|188046
CP016343.1\|AUI73355.1\|312649_314116_+\|anthranilate-synthase-component-I	unknown	unknown	gnl\|CDD\|184146
CP016343.1\|AUI73347.1\|298298_298862_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789
CP016343.1\|AUI73350.1\|303664_305491_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
CP016343.1\|AUI73346.1\|298107_298296_-\|ferredoxin	unknown	unknown	gnl\|CDD\|224066

Protein	Function_ID	Function_description	E-value
CP016343.1\|AUI73357.1\|314677_315700_+\|anthranilate-phosphoribosyltransferase	gnl\|CDD\|234682	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional.	5.7699e-101
CP016343.1\|AUI73342.1\|290054_292655_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
CP016343.1\|AUI73349.1\|302429_303671_+\|acetylornithine-aminotransferase	gnl\|CDD\|179933	PRK05093, argD, acetylornithine/succinyldiaminopimelate transaminase.	0
CP016343.1\|AUI73354.1\|311025_311793_+\|chromosome-partitioning-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	3.30118e-79
CP016343.1\|AUI73352.1\|308014_308305_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	3.7388e-41
CP016343.1\|AUI73351.1\|306344_307979_-\|chaperonin-GroL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
CP016343.1\|AUI73343.1\|292651_293128_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|223396	COG0319, COG0319, Predicted metal-dependent hydrolase [General function prediction only].	1.01423e-21
CP016343.1\|AUI73404.1\|318117_318672_-\|50S-ribosomal-protein-L25	gnl\|CDD\|235534	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed.	7.25879e-51
CP016343.1\|AUI73345.1\|297304_298111_+\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	4.1465e-115
CP016343.1\|AUI73341.1\|287499_288552_-\|hypothetical-protein	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	1.63209e-34
CP016343.1\|AUI73356.1\|314093_314672_+\|aminodeoxychorismate/anthranilate-synthase-component-II	gnl\|CDD\|235552	PRK05670, PRK05670, anthranilate synthase component II; Provisional.	1.33505e-93
CP016343.1\|AUI73348.1\|299609_302258_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
CP016343.1\|AUI73358.1\|315699_316518_+\|indole-3-glycerol-phosphate-synthase	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	3.19881e-91
CP016343.1\|AUI73344.1\|296117_297299_+\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
CP016343.1\|AUI73353.1\|309613_309928_-\|monothiol-glutaredoxin,-Grx4-family	gnl\|CDD\|188046	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation. [Energy metabolism, Electron transport].	1.21579e-51
CP016343.1\|AUI73355.1\|312649_314116_+\|anthranilate-synthase-component-I	gnl\|CDD\|184146	PRK13565, PRK13565, anthranilate synthase component I; Provisional.	4.30945e-178
CP016343.1\|AUI73347.1\|298298_298862_-\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	3.10726e-111
CP016343.1\|AUI73350.1\|303664_305491_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
CP016343.1\|AUI73346.1\|298107_298296_-\|ferredoxin	gnl\|CDD\|224066	COG1143, NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion].	2.20945e-05

>CP016343.1|AUI73350.1|303664_305491_+|elongation-factor-4
MLINTKNIRNFAIIAHINHGKSTLADRLIQLCGGLYKRDFKNQVLDSLDIERERGITIKSQAVTLFYKSKQGKTYRLNLIDTPGHVDFMYEVSRSLYACEGALLLIDASQGIESQTLTNFYTALKRDLTIIPVVNKIDLPQASPKYTISNIKKIFNLHFKYVCCISTKLGLGIKVLLETLIKTIHNPKGDPYKKLLALIIDSWFSKYLGVISLVRIFDGNLKKGDQVIINSTGQSWYIQTVGFYTPKRCLTLKLSAGQVGFFVAGIKDIHGAPVGDTITHANANTDHRISGFKKVKSKIFAGLYPENVKDFKHFSTVLERLALNDASLIYTPENSNVYGCGFRIGFLGSLHLEIIKERIEREHGIKIIITLPSVKYKIKLKTGKIEYIYDPSKLPENYKLFKLYEPIVLARIIVPKIYVGNIIKECITFRGKQLCVVFINNFIKMIYELPMAEVITNFFNRLKSVSKGYASLDYEFYRFKKSNMVRLDILINNNRIEALTMIVPFDKAYKQGQFILKRIKLLLSKQLFDLNIKAVSYKKTLAKTQIKAIRKNVTAKCYGGDITRKKKLIEKQKEGKKRMKSIGNIEIKLNKNIFLSLFKTPNLFDQFS
>CP016343.1|AUI73349.1|302429_303671_+|acetylornithine-aminotransferase
MSINPKTKFKDFYKYILPLYSPQNKIPVKGYGSTIWVQDGRDYIDFSGGIAVNALGHSNPILLEALKEQSKKVWHVSNSYTNEPSLCLAKKLVKNTFADKVFFCSSGAEANEAALKLSRRYAYNHFGSKKNIIISFKKSFHGRTFFTVNVGGKNNYSHGFGPSPFCIIHAEFNNIHNFRKVINNYTCAVIIEPIQGEGGINVANYSFLKQLRNLCKIYNALLIFDEVQCGMGRIGKLFTYMHFKIKPDIITLAKSIGCGFPLAAMLTTNKVGEAFSIGVHGSTYGGNPLACAVGNIAFDVISNKEVLSGVKRKNKLLKQHIKRINLEFNIFKEVRGLGLLIGIELNKNYINIGRKILKVAFENGLMLLNAGPNVLRLAPSLLISIEEIEEGMSRLYTTIKCIKQNFKYLEYLC
>CP016343.1|AUI73348.1|299609_302258_-|valine--tRNA-ligase
MKYNNWHKNWETTKRLLNTYTSVPFSIMIPPPNVTGKIHIGHAFEYTLIDTIIRQKGMQGYKTLLQFGTDHAGIATQLLMDKKLSHDKVNRMFLGRKLFLKKTLQWCNKTIPKIILQMKSIGMSVDWKKERFTMDYGFYQAVQEAFIKLYKEGLIYRGKRLINWDPNLLTALSDIEVKNLQDLGKLWYIRYHLFNLHNVEAFCQKKAYLIVATTRPETIFADTCIAVHPFDKRYKAFIGKCVVLPLIGRILPIISEEVVDIKFGTGCVKITPAHNLIDYKIGKRQNSLFINMFNNRFKVRQKAEVCILKSGILLKYNLIKLPKVYVGLSIKSLRKNIVKDLLKNKFLEKKVDNHLLMLPCGDRSCAIIEPLLTDQWFVSIKNLANLAINAVKNGNITFIPKNYEKIYINWMYNLKDWCISRQLWWGHRIPAWYDKNNIIFVGRNEEEIRSKYAINFKTKLNQDQDVLDTWFSSGLWTFTTIGWPQIRTKSFNLFHPSSVLITGFDIIPFWVSRLIMMTLKLINELPFKRIFIHGLIRDKQGQKMSKSKGNVIDPIDVINGINYGADALRFTFLSISLPGKNINFDLRRFKGYMNFCNKIWNATRFVLSKIELFYNNEYNQFCCWENVTSINKFIISSLQNTKRKILLYFDEYRLDLASQTIYEFFWYDFCDLYLEITKIVFNSNYIGVKISTINTLLYVFKEILLLLHPFIPYITDEIWINIMQVQYKNKHITTTILNQDLPKIDINKLDDNAIYDVNFINIFITKLRCIRSLIYLNKSIKLTVFCSKVKLFYKSLINKYKIYICNLANINIIKYSEPCINCVSKKNQQFFILHIPLLSFCQRNYLVEELQKKKQLLKLSCLKINLKLNTKTSFTAITTNKK
>CP016343.1|AUI73347.1|298298_298862_-|peroxiredoxin
MAIINKKIRPFTATAYLNGKFINISNEDLQGKWSVIFFYPADFSFVCPTELLDLSENYSTFKTLGVEIYSVSTDTHFTHKAWHDSSFTVSKIKFPMIGDPSGNISRSFNVFVAETGLAERSTFVIDTECKIKLAEYNAIGIGRNSKELIRKIQAAQYITNHPNEVCPANWTDGSKTFKQNIDFVGKF
>CP016343.1|AUI73346.1|298107_298296_-|ferredoxin
MSLLITTDCINCDMCELVCPNNAIFPGEEVYVINHDLCNECIGVFPHPQCQQVCPVACIVQP
>CP016343.1|AUI73345.1|297304_298111_+|tryptophan-synthase-subunit-alpha
MKLNKRIINCFEQKKRAAFVTFITAGDQDYEKSLTLINSLPKAGADIIELGMPFTDPIADGEIIQKSTQRSLKTGQNQKKTLELVKAFRLFNKKTPIILMGYYNPIYRYGIKKFIKDAKKAQIDGLIIVDLPPEHAQEVSVPAKKQGIDFINIITPNTNIKRIPFIVKNSSGYIYYISINGVTGGSVPIFYEVEKAVKLIRKYTNLPIAVGFGVKNRNSVKKLANISDAVVVGSALLKQIEIHCYDQKTAISNVLNLTSRLSRGLVKI
>CP016343.1|AUI73344.1|296117_297299_+|tryptophan-synthase-subunit-beta
MNIIPNHKGLFGNFGGRFVSETLIPLIIELEKTYKTAKKDESFRKELAYYQKTYIGRSSPLYLADRLTQALGGAKIYFKREDLNHTGAHKINNCIGQILLAKRLGKNRIIAETGAGMHGVATATVAARLGMKCVIYMGSTDVKRQKENVYRMKLLGAKVVPVNSGKGTLKDAMNEALRDWVNNIETTFYIIGTVAGPHPYPLIVRDFQSVIGNEVREQIIKIEGKLPDILVACIGGGSNAMGLFFPMIKDNTVRMIGVEAGGHGIETGKHAASLNGGVPGVIHGNRTYILQNKDGQIKDAHSISAGMDYPGIGPEHSYYYKCKRIDYVSVTDKEAIEAFKKCCYLEGIIPALESAHALAYVTKIAHSLSNKTTIVLNMSGRGDKDISIIREHS
>CP016343.1|AUI73343.1|292651_293128_-|rRNA-maturation-RNase-YbeY
MKKKIKCVYVHMQFIKNNTIKKIVPNESLLSSLFYSFLKPKYKPYKDIVFNIRFVEYKEIIGLNSYYRGFNSLTNIISFSYEALSQRINIQLLGELVITPTLLLYESFKMNKAFIDHCAHIIVHGLLHLIGYNHKNVTDADNMENIEYSNFNKTNIHL
>CP016343.1|AUI73342.1|290054_292655_-|leucine--tRNA-ligase
MMYPFNYKQIELEAQNFWYNHNCFEIVEMPNKEKFYCLCMFPYPSGNLHIGHVRNYTIGDVISRSQRMLGKNVLNPIGWDAFGMPAENAAKKNIVSPTDWTNSNIYYMYNQLKSLGFSYNWERKITTCKIDFYRWEQWFFIKLIEHGVIYKNNAIINWDPLEKTILANEQVINGIGWRSGAKIEHRKIPSWFLKITDYAYELLRGLANIDWPESVKKMQINWIGKYKGIEVSFKVIGSVPNCYSYLKVFTQRPDTLFGVTYILLAPDHHLVELAAQYNYQIKKLCNTFKICGKCSLAILKNKELGLYVGYNVLHPITNEILPLYVSSFRYFEYGATASMGVPAHSHRDWDFANTYGLPFKTVVSDINGKVPDISKNAYTDFGFIINSGIFNNITCFEAFDYIFSFIKQYKSGVVKQKLKLRDWGISRQRYWGTPIPVKYGITGKPTPLTDEEIPVYLPKHVCLNSKFNLKKIPSFYVLGNGWVRDTETFDTFIESSWYYARFCCTDNNHSILDARVNYWLPVDMYIGGIEHAILHLMYARFFHKLMRDFGLVDCDEPFKKLITQGMVLTYTYYRESFGIKEWFNPLDVCLLKEKKNGNIIPTVKRDGGIVIRNGIEKMSKSKNNGIDPNVLINRFGADTLRLFVMFSAPTEQVLIWSESGIIGSSRFIKRLWNIVHTYIYISGSEHTIIKLSSLRPDQFNLYRQLQKTIKKATSDMIGRHVFNTVISTVMKLTNLVSHFIDIDSSIIGLAVTREALKSIILILAPIVPHITHVLWKVLGFSYAVIDATWPSYNKHCMLGHLFTVLAQINGKIRKEIKLPLNYHTKTFASTILSSISIKGYLNCKEIHTLIFVHAKVINIVYKSSMF
>CP016343.1|AUI73341.1|287499_288552_-|hypothetical-protein
MIKHNSLFFHVGTLLKGYFSNTTHVKCYIDKIIRYNISVAHSAIHLLNVTIQRVAKNKLIKKGFFINQNKIIFEYKSYKPLTNKILFIIELLINRAIAKQHIILIKLLSKQKKNIKHKNVVVIGKEGGYSIDVCNGTHIKTTKNIGCFCIMSEQCVSKGIRRIEAVTNKNAVRYILNNKLTLKDLSFASNLCLNNVKKNIKHLKNKNKVLLDEFNLFKQITIQKQINKLLSKMFYFFGYKFLIYKIKSKYKKDLFVILHSIVNKLVNKSIIIVYVLNKHNINVFIKITNDCLKFRPYSVFFKQVLQTNKTIFYNATTNVSYLKTSINNFNMLYTKTLKTNIKTFLLKRGL
>CP016343.1|AUI73351.1|306344_307979_-|chaperonin-GroL
MAAKQIRFSEDARTRMVRGVNALADAVKTTLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTADVAGDGTTTATVLAQAIVNEGIKQINSGRSPMDLKRGIDKAILASVEEIKKLSVKCTDSRSIAQVGTISANGDSNIGQLIAKSMEKVGKKGVITVDESRGFEDELEVVEGMQFDRGYISPYFVTNQENMTVELESPYILIVDKKISNIRELLHLLENVAKSGKPLMIIAEDIEGDALATLVVNNMRGIVKVAAAKAPGFGDRRKAMLQDLAILTGSTVISDEIGLNIEKVTIKNLGNARRITMSKENTTIIDGAGSERDIESRVKQIRKQIEETTSDYDKEKLQERVAKLSGGVAVIKVGAATEIEMKEKKARVEDALHSTRAAVEEGVVAGGGTALIRILNKLQNLKGNNELFIHQTMLHLFPKFEAPLRQIVNNAGEEASVIINKVKEGVGNYGYNVSTGEFGDLINMGVLDPAKVTRTVLQSAGSIGGMIITTEAMIADHQDENNKMPHSTDGVNGMRS
>CP016343.1|AUI73352.1|308014_308305_-|co-chaperone-GroES
MKIRPLHDRVVVRCIEVEQKTSGGIVLPGNAQEKQNRGEVVAIGKGKILNNGAIRPLDVKIGDTVIFKESFGVEKQKIEDEEVIIMSESDILGILE
>CP016343.1|AUI73353.1|309613_309928_-|monothiol-glutaredoxin,-Grx4-family
MKNKTIEIIKNQIKKNQIILYMKGTPNLPQCGYSAQAVKFIKKYLNRFKYINVLESVHIRQELPKWSKWPTFPQLWINSKLIGGSDIIFEMYKTGELKRLIKKR
>CP016343.1|AUI73354.1|311025_311793_+|chromosome-partitioning-protein
MININYIITIAISAAFNITLLLFNISFQLAMNVKGYKVGLLDADIYGYSQSTILNVKKKIFINKKKRIQPIPYYGIKAMSLGFIVKKQTKAIIGRGPIISKLLVDLFTNTNWGYLDYLFIDMPPGTGDIMLSISKSISVSGVIIITTPQDVSLLGAFKGINMFNKIKIPIIGLIENMSYYTCKSCGYSTSIFNNKYNNILKKYKIKKIGCFALHKTLCDKKPILIAKPTSKISVFLKVIADIVDIKLKPQFRIGL
>CP016343.1|AUI73355.1|312649_314116_+|anthranilate-synthase-component-I
MKRILIYKEIISDLDTPLSLYMKVANYHWTFLLESIEGKKQWCRYSIIGLRCHQRIEIYNNKINLFKDKIKIEKTKKIDTLVWLSNYIKTIKKTILKKNKSKTILDGGLVGYLGYDIIRLIEPTIKTYKQYNPINTPDIFLLRANELLIIDKYSGRLTILVNVNIYDFKKGLERIKIILKKLSLCANFNKTELVTHSFQTHIKHKYTLKPIFSSFNKFTFQNYIINLQKYINSGDVMQCVPSQRIIIPFYSQPFNLFRALRVLNPSPYMLFFNFNDHYVVGSSPEILVRVDNKTITLRPIAGTIQKRSGIHNEILKDYKEVSEHIMLIDLGRNDVGKVSSTVRVQNQFLIERYSHVRHIVSTLIGILKHKIDLIDIVRATFPAGTIAGAPKIRALEIINTLEPIRRGIYSGAIGFLSWNGNMNIAIAIRTAIVKNYKLHIQAGVGIIEESQYKKEWNEILNKSSVILKAALIAIVEEKGDKVENINYR
>CP016343.1|AUI73356.1|314093_314672_+|aminodeoxychorismate/anthranilate-synthase-component-II
MRILIIDNYDSFTFNIVHYFFELGVDVNIIRNNLNIKNIENGYFTHLVISPGPCTPNKAGFSIEVIKHFANKIPILGICLGHQIIGQVFGCKMRKSTQLFHGKTSRIKHINKGLFKGLKTPILINRYHSLIIDRKYLPDNLEVTAQTDCYDITPNVIMGIKHKQYNIEGLQFHPESILSFKSHGLLKNFIKK
>CP016343.1|AUI73357.1|314677_315700_+|anthranilate-phosphoribosyltransferase
MINTILNKLINKRNIKFNQFYKIMKVINFGKIKSTQLASILTALSIKKETSDEIAATAKVINDYYSFNIHNNKVMDLVGTGSDNFNFFNISTSSSFVVAAAGSINVAKFGSKSISSYSGSLDLLNVLGINLYLKKKDIRKCIKRLQLVFLISEFKYKKKIRKIRMDIRIPTIFNIVGPLTNPIKPFKQLVGVYDRRLLNIFSKVFMKLGSKKTLIIHSKEGSDEISLNKATYISELNNGKIINFLINPTNFFLKKNTLDFIQIKSVLQSLDIVIHSIKGHFCLAFEMILLNAGTALYVSGIVNNIHNGLELSKYILISGKAYKKLKTIVFFTKCFKKGIL
>CP016343.1|AUI73358.1|315699_316518_+|indole-3-glycerol-phosphate-synthase
MKILFNILKYKRNTINVCINKLSLKILRKGFYSNKEQFSNNKFIKSIKNKQYKNQTSIIAEIKRCSPSKGIITETKNIEKLALNYFFNGAVCISILTEKNFFKGSKKYILTVKKVFDIPILFKDFIIDEYQVFEARLLCTDCILLIVSILKLDLLKKLYNLALSIGLDVLLEIHNLLELEVALFSLNAKFIGINNRNLYTFNTSINITISLLKYMPSNVVFVTESGILNVNDFIKLQRFGVNVFLIGEFLLSNNDIFLRTLLDKANKYILTY
>CP016343.1|AUI73359.1|316978_317158_+|hypothetical-protein
MFDFGLMLFIFNSLLFCFAKILVFKLLINYVFLFCLKKIIYMLFAYYYCFVFNFTALIF
>CP016343.1|AUI73404.1|318117_318672_-|50S-ribosomal-protein-L25
MQINAFVRYNIGKKANKNLRNNDIIPAIIYGDKKQNVLIGLEKKIILNFIKQETFSSTILYIKLFNKKEKVILRDIQRHPYKNLINHIDLLRINENKQITVLVKIKLIGKELCKGVKQDGGLLVLHKSYVRIKCLPKFLPKAFEINVSNLSVGQSVDIKQFYKTNNFFFIEKTNKIVTVKHVTN

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Crispr_ID: CP016343_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP016343_5

343103-343189

Orphan

Consensus_repeat	Method
TAACTACACAAAAACATAAAACACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP016343_5

>merge|CP016343|5|343103-343189|CRISPRCasFinder
TAACTACACAAAAACATAAAACACAGCACGTAATATCTAATTACTAACATAACTTTTTAAATTAACTACACAAAAACATAAAACACA

>CP016343|5|5|343103-343189|CRISPRCasFinder
TAACTACACAAAAACATAAAACACA	GCACGTAATATCTAATTACTAACATAACTTTTTAAAT
TAACTACACAAAAACATAAAACACA

Protein	Signature genes	Signature genes Name	Protein_function
CP016343.1\|AUI73369.1\|328567_328951_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
CP016343.1\|AUI73407.1\|353954_354266_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
CP016343.1\|AUI73384.1\|353158_353407_+\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
CP016343.1\|AUI73373.1\|337830_338775_-\|homoserine-kinase	unknown	unknown	gnl\|CDD\|270702
CP016343.1\|AUI73368.1\|328112_328541_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
CP016343.1\|AUI73372.1\|336813_337824_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223701
CP016343.1\|AUI73374.1\|338782_339826_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235440
CP016343.1\|AUI73383.1\|352122_353139_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
CP016343.1\|AUI73370.1\|329336_330395_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|223352
CP016343.1\|AUI73380.1\|348153_348336_+\|hypothetical-protein	unknown	unknown	unknown
CP016343.1\|AUI73382.1\|351609_352101_+\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365
CP016343.1\|AUI73379.1\|344203_344791_-\|imidazoleglycerol-phosphate-dehydratase	unknown	unknown	gnl\|CDD\|234873
CP016343.1\|AUI73375.1\|339894_340611_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	unknown	unknown	gnl\|CDD\|234996
CP016343.1\|AUI73406.1\|353415_353724_+\|16S-rRNA-processing-protein-RimM	unknown	unknown	gnl\|CDD\|274061
CP016343.1\|AUI73385.1\|354279_355554_+\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783
CP016343.1\|AUI73371.1\|332362_334912_+\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|235444
CP016343.1\|AUI73381.1\|349860_351603_+\|acetolactate-synthase,-large-subunit,-biosynthetic-type	unknown	unknown	gnl\|CDD\|180578
CP016343.1\|AUI73378.1\|343571_344192_-\|imidazole-glycerol-phosphate-synthase,-glutamine-amidotransferase-subunit	unknown	unknown	gnl\|CDD\|223196
CP016343.1\|AUI73377.1\|342258_342438_-\|hypothetical-protein	unknown	unknown	unknown
CP016343.1\|AUI73376.1\|340640_341357_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	unknown	unknown	gnl\|CDD\|179108

Protein	Function_ID	Function_description	E-value
CP016343.1\|AUI73369.1\|328567_328951_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	5.0145e-65
CP016343.1\|AUI73407.1\|353954_354266_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	3.25693e-47
CP016343.1\|AUI73384.1\|353158_353407_+\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	3.26898e-31
CP016343.1\|AUI73373.1\|337830_338775_-\|homoserine-kinase	gnl\|CDD\|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	4.57526e-102
CP016343.1\|AUI73376.1\|340640_341357_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	gnl\|CDD\|179108	PRK00748, PRK00748, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated.	3.71551e-101
CP016343.1\|AUI73372.1\|336813_337824_-\|hypothetical-protein	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.00278e-09
CP016343.1\|AUI73374.1\|338782_339826_-\|histidinol-phosphate-transaminase	gnl\|CDD\|235440	PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional.	1.35415e-177
CP016343.1\|AUI73383.1\|352122_353139_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
CP016343.1\|AUI73370.1\|329336_330395_+\|SAM-dependent-methyltransferase	gnl\|CDD\|223352	COG0275, COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane].	3.61677e-53
CP016343.1\|AUI73382.1\|351609_352101_+\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	4.26838e-82
CP016343.1\|AUI73378.1\|343571_344192_-\|imidazole-glycerol-phosphate-synthase,-glutamine-amidotransferase-subunit	gnl\|CDD\|223196	COG0118, HisH, Glutamine amidotransferase [Amino acid transport and metabolism].	2.0975e-80
CP016343.1\|AUI73375.1\|339894_340611_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	2.55532e-143
CP016343.1\|AUI73406.1\|353415_353724_+\|16S-rRNA-processing-protein-RimM	gnl\|CDD\|274061	TIGR02273, Ribosome_maturation_factor_RimM, 16S rRNA processing protein RimM. This family consists of the bacterial protein RimM (YfjA, 21K), a 30S ribosomal subunit-binding protein implicated in 16S ribsomal RNA processing. It has been partially characterized in Escherichia coli, is found with other translation-associated genes such as trmD. It is broadly distributed among bacteria, including some minimal genomes such the aphid endosymbiont Buchnera aphidicola. The protein contains a PRC-barrel domain that it shares with other protein families (pfam05239) and a unique domain (pfam01782). This model describes the full-length protein. A member from Arabidopsis (plant) has additional N-terminal sequence likely to represent a chloroplast transit peptide. [Transcription, RNA processing].	1.4247e-19
CP016343.1\|AUI73385.1\|354279_355554_+\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	2.77571e-179
CP016343.1\|AUI73371.1\|332362_334912_+\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0
CP016343.1\|AUI73381.1\|349860_351603_+\|acetolactate-synthase,-large-subunit,-biosynthetic-type	gnl\|CDD\|180578	PRK06466, PRK06466, acetolactate synthase 3 large subunit.	0
CP016343.1\|AUI73379.1\|344203_344791_-\|imidazoleglycerol-phosphate-dehydratase	gnl\|CDD\|234873	PRK00951, hisB, imidazoleglycerol-phosphate dehydratase HisB.	1.2447e-91
CP016343.1\|AUI73368.1\|328112_328541_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	3.59975e-68

>CP016343.1|AUI73377.1|342258_342438_-|hypothetical-protein
MSYIKKRIYILKEDIVCKKKNICLLAVRQKKLCLLKKVLNERKRTIKKVFVLFMSLVFC
>CP016343.1|AUI73376.1|340640_341357_-|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase
MLIIPAIDLKNGKCVRLKQGRMYKTTDYGDPLKVVQRFVKIGIKRLHVIDLNGAVLGEPVNKYIINKLIKHYPNLILQIGGGIRNSATIKKYLDVGIKYVIIGTLAIKKPHRLYNLCKKFGKHIILSIDSYKGYVAIDGWKKIANIKSTELAKNVSNCGISSIIYTDISRDGMMQGLNLKKTIKLANFAKIPIIASGGLNNVFDIVNLKTNKNTFILGTIIGRAFYEGKIDLYKALLI
>CP016343.1|AUI73375.1|339894_340611_-|imidazole-glycerol-phosphate-synthase-subunit-HisF
MSLSKRIIPCLDIDCGKVVKGIKFENTRYAGDPLKIAKFYNEQKADEIALLDIKASYSGKNNTIEVVKKIANEIFIPLTVGGGIKTCKNIRELLNAGADKISINTAAVLNPKIVREASDKFGSQCIVVAIDAKRKTNKNIKEDWEVLTYGGRKNSGISAIDWACKMVKYGAGELLITSIDRDGTKRGFDINLIKTISQRVNVPIIASGGVGNLDHFVEGIKTGKADAVLAASIFHFGE
>CP016343.1|AUI73374.1|338782_339826_-|histidinol-phosphate-transaminase
MRMSYKINKLHPYTPGEQPYKKMIKLNTNENPYPPTPKINKLLKNFNYYKLRLYPDPTTSKLRKIIAKVYNVKSEQIFIGNGSDEVLALAFMTFFCQKLPLLMPTITYSFYPVYCKLYNIRYKTIPLQNKFEINLKKMNISNGGIIFANPNTPTGHAISYIEVNKLLDIHNEYVVLIDEAYIKFGSESAIPLIKKYKNLLIVNTLSKAYSLAGIRIGFAIGSTYLIKGLEKVKNSFNSYPIDVISELIAIEAIKDIKYLKKNCNYIIYIRETLSKQLKDVGFTVLPSKANFMLVKPNNISAKTMFIKLRNHGILLRYFNNIKKYIRISIGTIQQMNYLIETIKYILK
>CP016343.1|AUI73373.1|337830_338775_-|homoserine-kinase
MAVFTKIKKQKLSLFLKSFNIKKQIKFKEVKQGTENSTFFIQTETKKFVLTLFEQGSYKDLTGFIDLLKFLYEHCLPIAMPLIDKNNIIIKKLSGKHALLFPNLYGIHPRTPNIEQCSIIGKTLGRLHSISNKFKFKKQNLRDINWIVLNYYKVISLLTKEDQELMFNQIYLLKHIVTNLPQGILHGDLFRDNTLFYGNNICGLIDFYNGCTGDLIFDLAILINDWCSDQHGNLLEDKYKAILNHYVLERPFTKEEVYILPKMLRLTALRYWISRLLVKNIFPVTHNLRHKEPKKYRDILVSHCKNKYPLYLKN
>CP016343.1|AUI73372.1|336813_337824_-|hypothetical-protein
MNNYMLTRATVISLLIYFMGLLLIFPLHLLPCLLSGLFVFELVKAITPLLQTLIPVNKARLSSVVLLGASIVTILSLFFFTVISFILQDIKTPDNLIQRYMLIFDKARHQLPHSVVIYLPESADELSQIINELIYKHANELQFVFGCAIHTCFSLLSGMILGAIIALQDIPDIKSLTPLTYALLQRSITLSNAFHNVVFAQLKISLVNTLLSSILLLICAPCLNVYIPLTKTLILITFIMGLIPLIGNLISNILIFIVSLSVSLWTAVIVLTYLIAIHKLEYFLNARIIGLRINSNAWELLFAMLFFDAAFGFSGLIAAPMYYAYFKCELTNEKVI
>CP016343.1|AUI73371.1|332362_334912_+|DNA-mismatch-repair-protein-MutS
MKTKIKKNIYNATPAITQYLRIKNHYHKILLMYRMGDFYEFLFEDAHTASALLNIQLTSKGKYNNKRIPMAGIPCHSLRTYLKRIITAGISVAICEQIKTKKTKKSKLLERKVIRVITPGTLYEDSLLDESKDNLIISIIQKNNKWGISWLEFTTGAFGVLEVDNIHDLRLELDRLNPVELLISRLHKKLPKLPVHKSIIKPISDINFDYNNACKVLFKKLNIKNINKKLNAGVSAAGAIIQYINNNKIYNLAHINHLIFENKKDKLKIDRITKKHLELDVNVNGKQENTLFSVLNNTMTHMGSRLLKKWINNPITNYDLVFSRQKGVEIVLTNNFIDILQKYIKKIGDIERIVTRISLKTAKPLDLIKFKIALNVFPKLKTLLKGLLIVNKNSKSILNYIHKEIFTFPNIALLLDEALVDNPPNSFRYGYVIKSHFNKNLDKLRKIYTNSEKFIKTFENKEKLRTGIIKLKVTYNKLHGLFIEIPKGRKHKYKIPKNYIRTKTLKNSERFYTSELKYFEKRLIESKEKSIKYEKSIFKKLIKVLVGNIPYFIKTSKSLATLDVITTFAERALTLNYCKPIINKNKIGIKIMEGRHPVIESTTNHHFVPNNLFLNHNKSIHIITGPNMGGKSTFIRQIAIIVLLTYIGSYVPAKYAEIGPIDQIFTRIGGYDDLSAGKSTFMIEMHETAKILNTATFKSLVLMDEIGRGTNPTEGLCLAWACLERIIQIKALTLFSTHYFSLTQIAKKFKQITNLHFSASIKSNKVSYIYNIQKGATNNSYSSSVASLANIAQGVINKSNNLIKHFQDHQKSLNKRHTLMKYIKSFKYKDLTRYLKFIKSFFKNLKDMF
>CP016343.1|AUI73370.1|329336_330395_+|SAM-dependent-methyltransferase
MTHKSLFFNKAIDYLITNKDGLYIDCTLGLGGHSKQILNRLSINGLLIALDNDLNTKTLVKNLEFYLDKRFSFININFKYLEIIAKKKHLFGIVSGILLDLGISTYQIKDYKRGFSFFINGPLDMRINNTFGITACCLLNHYKFKQIFKIFKTYGEDEQLYRLTVEICNRRHHFPFKMTLELSNLIKTLKFTNYHIKHQLIKTKPKIQKTYIIHHKSIKIKQKFIKHSKSINTKHIIIKENTTKNKIIKTNNNSINKKKKKHIHPSTKIFQAIRSYINNEIQNLEIVIITSLKLLKTNKKLIIITFNSLESQIVNKVLKTTLNKVNKIYPSIEEVFYNNSSRCSAIFIIQKL
>CP016343.1|AUI73369.1|328567_328951_+|30S-ribosomal-protein-S9
MYFYGTGRRKTASARVFLKIGNGKFIINNNTLKKYFHNINLYYLMIQPLELTNNVNTFNIKITVNGGGVKSQAEAIRHGISRALVAYNNNLRYKLRLNGYLKRDSREVERKKIGFKKARKSPQFSKR
>CP016343.1|AUI73368.1|328112_328541_+|50S-ribosomal-protein-L13
MKTLNVKINDLKREWYIINAYNKKLGRLSTKIVHFLLGKNKVIYNSYLNIGDNIIVINADQIKLTGNKLIQKKYYYHTGYPGGLRKTTLLELMKTNPEKVIKQSVKGMLPKNSLGRLISKKLKIYKGKQHPHISQQPLELLI
>CP016343.1|AUI73378.1|343571_344192_-|imidazole-glycerol-phosphate-synthase,-glutamine-amidotransferase-subunit
MAIIIIDYGIGNLYSVANAIKKVTKEKVYITNDAKKIKLANRIILPGQGAIKDCIKELKKKELYWLLKEIIHTKKKPVLGICIGQHLLMESSEENKGVFGINYIKGIVKNYKNKNFKIPHTGWNIVYKHKEHQIWNGIKSGSRFYFVHSFYVKTRFKNNVLGVTEYGGKCANVITYYNSVITVQFHPEKSSSLGLKFLKNFINWLP
>CP016343.1|AUI73379.1|344203_344791_-|imidazoleglycerol-phosphate-dehydratase
MSVNKKKKYRTANIYRETKETKIRVYVNLDGQGKINIKCGIELLEHMLDQITNNGQIDLTIKTTVYSHIDHHHTIEDIGIAMGKAFKKALGKKIGIKRYGCSYVPMDESLSRVVIDLSGRPSLHMTKVGKFDLFREFFKGWVNNCKSTLHIDILKGFNSHHQIESIFKSFGISIRKAITKDKRITNKLYSTKGTL
>CP016343.1|AUI73380.1|348153_348336_+|hypothetical-protein
MVRGYFGILCLSYFADSCYNVVCCFKVFRIYVLEVVILTYNLYYHYLVLVCTFFVFLFFC
>CP016343.1|AUI73381.1|349860_351603_+|acetolactate-synthase,-large-subunit,-biosynthetic-type
MELLSGADMIIRFLKDENVKYVYGYPGGAALHIYDALFRQKVVKHILVRHEQAATHMADGYARASVKPGVVLVTSGPGATNAVTGIATAYMDSIPMVILCGQVVSKLIGEDAFQETDIVGVTRPIVKHSFTIRDTADIPTILKKAFYIASTGRLGPVLVDIPKDMTAPNELYEYIKQNDIKLREKKKNVCNNKEFIKKALKLLLKAKKPVLFVGGGAITGKASHKIREFANIAYLPVVTSLMGIGAYPQSDFQYIGWPGMHGSYEANNAMHNSDLIFCVGARFDDRVTNNTEKFCPNAKVIHVDIDPCSISKTILADIPIIGSAKKVVKELLSKINKSYKDEINLENRKKHLEIWWKCINKWIKNRDGKLYKPVTALSRDLIKPQQVIEAVYKTTKGEAIIATDVGQHQMFAAQYYKFNKPNKLITSGGLGTMGFGLPAAMGVKLSYPHENVVLITGEGSFQMMMQELSTCKQFDISLKIIHLNNGSLGMVRQWQDINYKARHANSYVESLPEFHRLFEAYGFNAITVKVIEELESALETVFINKNELVFLNIYIDPLEHVYPMQKPLGAINDMIISKAE
>CP016343.1|AUI73382.1|351609_352101_+|acetolactate-synthase-small-subunit
MRHIISILLENEPGALSKIVGVFSQRNFNIETLNVAHTEDITLSRLTLTTNGDACVIEQIIKQLNKLVDVVKILDLTEVSHIARELMLVKVKAEADDRRAEIKRITDIFRANIVDVTTTDYIIQITGDEDKLDAFINALKGINEVVRTGVSGITRVWVKVKLS
>CP016343.1|AUI73383.1|352122_353139_+|ketol-acid-reductoisomerase
MKIYYEKDCNRSLIKQKRVVVIGYGSQGHAHANNLKDSGVNIKVALYKGSRSWKKAEVAGLKVEVIEKAIIDADIVVMLVPDELQKNIYYRYVENNIKSGAVLIFAHGFNVHYQQIEPRQDIDVVLVAPKAPGHTVRTTYMQGGGVPSLIAIYKDNSGKAKDIALSYASAIGCGKTGIIQTTFKEETETDLFGEQAVLCGGVSALITAGFEVLVEAGYSAEMAYFECLHELKLIVDLIYEGGLGDMRYSISNTAEYGDYVSGHKIINNDTKKNMKSLLENIQNGKFAKDFIIEKKTGFTLLKTKRRINSEHKIEKVGKVLRSMMPLICKNKIIDKNKN
>CP016343.1|AUI73384.1|353158_353407_+|30S-ribosomal-protein-S16
MVKIRMTRCGCKNRPVYQINVKDSRSSRDGKFIEKIGYYNPLVISEKRFCINSSRLGYWKNKGAKISNRVLSLLKKNKKDKK
>CP016343.1|AUI73406.1|353415_353724_+|16S-rRNA-processing-protein-RimM
MGSIAKSYGVKGWIKVNSYTNQRCNIIDYSRLWILEIKGKNIYLKVKRIRLVHRFFIVQLYGIKTCEKAKTLIGSLIKLQKNLLPNLQKGEYYLYQFKNLRV
>CP016343.1|AUI73407.1|353954_354266_+|50S-ribosomal-protein-L19
MKTKIIPKFMTGDTVIVQIKVLEGSIERLQAFEGLVIGKRNRGLNSSFTVRKVTSGIGIERTFKTYSTCIFSIKINRKGKVRKSKLYYLRDLKGKSARINNIS
>CP016343.1|AUI73385.1|354279_355554_+|homoserine-dehydrogenase
MIRIGICGLGTVGGGTFNLLKKNYNEIFRRIGSQFIIEQIGTRSDNPICNLTGIKVTRNIFEVVRNPKVDVVVELIGGCNIARKLVLEAINNKKHVVTANKAMIAIHGKEIFCAAKKRGVMVAFEAAVAGGIPIIKCIREGLCANRIYSIAGIINGTVNYILTNMKKGISCENILNQAKLLGYAEEDPTLDLEGTDTAHKLTILAAIAYGIPLHFEKIYIEGIGCINITDVKKADKLGYNIKHLGLSKRKKTGIELRVHPVLLPKNRLLSNVHGVTNAIEINGDAVGSTLFYGIGAGSEPTASAIISDLLDVSRNKLTEHINRTPYLAFSTMATVSILPIDQVITDYYLRFMLISFNMIGHVVNIFYKLGIRIKHLLLKKQESSFVIILLTYSTKEANMNLAIGKLESTNVILGHITRVRVENV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage