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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025540 Vibrio harveyi strain 345 plasmid p345-67, complete sequence 0 crisprs NA 0 0 0 0
CP025539 Vibrio harveyi strain 345 plasmid p345-185, complete sequence 0 crisprs csa3 0 0 0 0
CP025538 Vibrio harveyi strain 345 chromosome 2, complete sequence 0 crisprs csa3,RT,cas3,WYL,DEDDh 0 0 3 0
CP025537 Vibrio harveyi strain 345 chromosome 1, complete sequence 0 crisprs csx1,cas3,DinG,csa3,DEDDh,PD-DExK,cas2,RT 0 0 7 0

Results visualization

1. CP025538
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 312052 : 362856 46 Vibrio_phage(16.67%) holin,transposase NA
DBSCAN-SWA_2 385325 : 454958 58 Enterobacteria_phage(33.33%) transposase,integrase attL 430459:430481|attR 455012:455034
DBSCAN-SWA_3 1135667 : 1184529 47 Enterobacteria_phage(42.86%) plate,transposase,integrase attL 1147318:1147333|attR 1185604:1185619
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP025537
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 99699 : 189948 47 Tupanvirus(29.41%) protease,transposase,integrase attL 87879:87899|attR 190567:190587
DBSCAN-SWA_2 437789 : 444473 7 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_3 550112 : 557179 9 Megavirus(16.67%) NA NA
DBSCAN-SWA_4 1778274 : 1791836 12 uncultured_Mediterranean_phage(22.22%) tRNA NA
DBSCAN-SWA_5 2714683 : 2724616 12 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_6 2729385 : 2753691 29 Burkholderia_phage(23.81%) tail,terminase NA
DBSCAN-SWA_7 2903664 : 2972761 49 Bacillus_phage(42.86%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage