CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP024137	Escherichia coli strain 14EC017 plasmid p14EC017c, complete sequence	0 crisprs	NA	0	1
CP024135	Escherichia coli strain 14EC017 plasmid p14EC017a, complete sequence	0 crisprs	c2c9_V-U4	0	0
CP024136	Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence	1 crisprs	csa3	1	2
CP024134	Escherichia coli strain 14EC017 chromosome, complete genome	7 crisprs	csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	15	13

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4636 : 72492

Stx2-converting_phage(30.43%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK14490.1\|4636_5041_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0
AUK14491.1\|5037_5385_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
AUK14492.1\|5433_6972_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.3e-294	99.4
AUK14571.1\|7206_10950_-	autotransporter outer membrane beta-barrel domain-containing protein	Q9LA58	Enterobacterial_phage	6.1e-218	38.9
AUK14493.1\|11735_12948_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.4e-163	96.3
AUK14494.1\|12914_13016_+	AMP nucleosidase	A0A0N7BTS3	Escherichia_phage	5.7e-07	96.2
AUK14495.1\|14897_15185_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	5.8e-20	50.5
AUK14496.1\|15181_15433_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
AUK14497.1\|15638_15827_+	hypothetical protein	NA	NA	NA	NA
AUK14498.1\|16198_16402_-	hypothetical protein	NA	NA	NA	NA
AUK14499.1\|16363_17576_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
AUK14500.1\|18400_18802_-	lipoprotein, PulS/OutS family	NA	NA	NA	NA
AUK14501.1\|18895_19729_-	prepilin peptidase	NA	NA	NA	NA
AUK14502.1\|19780_20296_-	type II secretion system protein M	NA	NA	NA	NA
AUK14503.1\|20282_21455_-	type II secretion system protein GspL	NA	NA	NA	NA
AUK14504.1\|21493_22471_-	pullulanase	NA	NA	NA	NA
AUK14505.1\|22467_23067_-	type II secretion system protein GspJ	NA	NA	NA	NA
AUK14572.1\|23063_23411_-	type II secretion system protein GspI	NA	NA	NA	NA
AUK14506.1\|23425_23977_-	type II secretion system protein GspH	NA	NA	NA	NA
AUK14507.1\|23973_24408_-	type II secretion system protein GspG	NA	NA	NA	NA
AUK14508.1\|24438_25662_-	type II secretion system protein GspF	NA	NA	NA	NA
AUK14509.1\|25663_27166_-	type II secretion system protein GspE	NA	NA	NA	NA
AUK14573.1\|27162_29076_-	type II secretion system protein GspD	A7BJX1	Enterobacteria_phage	1.9e-26	27.6
AUK14510.1\|29133_30009_-	type II secretion system protein GspC	NA	NA	NA	NA
AUK14511.1\|30092_32753_-	peptidase M66	NA	NA	NA	NA
AUK14512.1\|33101_33353_-	hypothetical protein	NA	NA	NA	NA
AUK14513.1\|33349_33628_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	8.8e-05	34.2
AUK14514.1\|33748_34962_-\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
AUK14515.1\|35140_37351_+	Catalase-peroxidase 2	NA	NA	NA	NA
AUK14516.1\|37394_37784_+	cytochrome b562 family protein	NA	NA	NA	NA
AUK14517.1\|37895_39108_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	1.0e-166	97.6
AUK14574.1\|39158_39656_+	resolvase	A0A1S6L009	Salmonella_phage	3.5e-28	52.7
AUK14518.1\|42651_43977_+	hypothetical protein	H6WZN2	Escherichia_phage	5.5e-222	84.1
AUK14519.1\|44963_46177_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	1.0e-166	97.6
AUK14520.1\|47142_47385_+	hypothetical protein	NA	NA	NA	NA
AUK14521.1\|47651_48473_+	carbohydrate transporter	NA	NA	NA	NA
AUK14522.1\|48472_49579_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
AUK14523.1\|49672_51394_+	phosphoethanolamine transferase CptA	NA	NA	NA	NA
AUK14524.1\|51467_52466_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
AUK14525.1\|54920_55271_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	6.9e-39	65.5
AUK14526.1\|55267_55693_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
AUK14527.1\|55707_56847_-	hypothetical protein	A0A0P0ZBS5	Stx2-converting_phage	3.2e-202	98.9
AUK14528.1\|56896_57244_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
AUK14575.1\|57240_57621_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
AUK14529.1\|57770_58331_-	fertility inhibition protein	NA	NA	NA	NA
AUK14530.1\|58433_59294_-	alpha/beta hydrolase	A2RQC8	Archaeal_BJ1_virus	9.7e-10	23.5
AUK14531.1\|59352_60099_-	conjugal transfer pilus acetylase TraX	A0A077JBM8	Xanthomonas_phage	1.2e-08	30.8
AUK14532.1\|60118_65389_-	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA
AUK14533.1\|65388_67668_-	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA
AUK14534.1\|67921_68653_-	complement resistance protein TraT	NA	NA	NA	NA
AUK14535.1\|68666_69101_-	conjugal transfer protein TraS	NA	NA	NA	NA
AUK14536.1\|71278_72492_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	1.0e-166	97.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP024136

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CRISPR-Cas detection and classification

Crispr_ID: CP024136_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024136_1

79435-79554

Orphan

Consensus_repeat	Method
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024136_1

>merge|CP024136|1|79435-79554|CRISPRCasFinder
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCACTGTAATTTTCATGAAAGGTGGATGGCTGCGCACTGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA

>CP024136|1|1|79435-79554|CRISPRCasFinder
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA	CTGTAATTTTCATGAAAGGTGGATGGCTGCGCAC
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA

Protein	Signature genes	Signature genes Name	Protein_function
CP024136.1\|AUK14485.1\|82095_82449_+\|DNA-distortion-polypeptide-3	unknown	unknown	unknown
CP024136.1\|AUK14453.1\|73783_74578_-\|aminoglycoside-O-phosphotransferase-APH(3')-IIa	unknown	unknown	gnl\|CDD\|270699
CP024136.1\|AUK14463.1\|82986_84051_-\|P-loop-NTPase	unknown	unknown	gnl\|CDD\|379293
CP024136.1\|AUK14459.1\|79806_80646_+\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444
CP024136.1\|AUK14451.1\|72191_72671_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|366911
CP024136.1\|AUK14450.1\|68969_72122_+\|multidrug-efflux-RND-transporter-permease-subunit-OqxB	unknown	unknown	gnl\|CDD\|223911
CP024136.1\|AUK14449.1\|67770_68946_+\|multidrug-efflux-RND-transporter-periplasmic-adaptor-subunit-OqxA	unknown	unknown	gnl\|CDD\|273776
CP024136.1\|AUK14452.1\|72772_73477_-\|IS6-family-transposase-IS15DI	unknown	unknown	gnl\|CDD\|225853
CP024136.1\|AUK14458.1\|79637_79868_-\|hypothetical-protein	unknown	unknown	unknown
CP024136.1\|AUK14461.1\|81512_81959_+\|hypothetical-protein	unknown	unknown	unknown
CP024136.1\|AUK14466.1\|85671_86316_+\|resolvase	unknown	unknown	gnl\|CDD\|239736
CP024136.1\|AUK14465.1\|84756_85377_-\|chromosome-partitioning-protein-ParA	unknown	unknown	gnl\|CDD\|349760
CP024136.1\|AUK14464.1\|84474_84705_-\|DNA-partition-complex-ParG	unknown	unknown	gnl\|CDD\|117819
CP024136.1\|AUK14462.1\|82673_82853_-\|hypothetical-protein	unknown	unknown	unknown
CP024136.1\|AUK14456.1\|78049_78331_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
CP024136.1\|AUK14460.1\|80666_81509_+\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	gnl\|CDD\|376444
CP024136.1\|AUK14448.1\|66746_67451_-\|IS6-family-transposase-IS15DI	unknown	unknown	gnl\|CDD\|225853
CP024136.1\|AUK14454.1\|76156_76345_+\|hypothetical-protein	unknown	unknown	unknown
CP024136.1\|AUK14455.1\|76354_77553_+\|IS91-family-transposase	unknown	unknown	gnl\|CDD\|377437
CP024136.1\|AUK14457.1\|78320_78572_-\|plasmid-stabilization-protein	unknown	unknown	gnl\|CDD\|179484

Protein	Function_ID	Function_description	E-value
CP024136.1\|AUK14464.1\|84474_84705_-\|DNA-partition-complex-ParG	gnl\|CDD\|117819	pfam09274, ParG, ParG. Members of this family of plasmid partition proteins adopt a ribbon-helix-helix fold, with a core of four alpha-helices. They are an essential component of the DNA partition complex of the multidrug resistance plasmid TP228.	4.81797e-42
CP024136.1\|AUK14453.1\|73783_74578_-\|aminoglycoside-O-phosphotransferase-APH(3')-IIa	gnl\|CDD\|270699	cd05150, APH, Aminoglycoside 3'-phosphotransferase. APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibiotics. The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	2.432e-109
CP024136.1\|AUK14463.1\|82986_84051_-\|P-loop-NTPase	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	4.38468e-29
CP024136.1\|AUK14459.1\|79806_80646_+\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	1.05812e-22
CP024136.1\|AUK14450.1\|68969_72122_+\|multidrug-efflux-RND-transporter-permease-subunit-OqxB	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
CP024136.1\|AUK14449.1\|67770_68946_+\|multidrug-efflux-RND-transporter-periplasmic-adaptor-subunit-OqxA	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	2.97256e-82
CP024136.1\|AUK14452.1\|72772_73477_-\|IS6-family-transposase-IS15DI	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.07441e-69
CP024136.1\|AUK14451.1\|72191_72671_-\|transcriptional-regulator	gnl\|CDD\|366911	pfam02082, Rrf2, Transcriptional regulator. This family is related to pfam001022 and other transcription regulation families (personal obs: Yeats C).	1.38445e-13
CP024136.1\|AUK14466.1\|85671_86316_+\|resolvase	gnl\|CDD\|239736	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subgroup is composed of proteins similar to the E. coli resolvase found in the par region of the RP4 plasmid, which encodes a highly efficient partitioning system. This protein is part of a complex stabilization system involved in the resolution of plasmid dimers during cell division. Similar to Tn3 and other resolvases, members of this family may contain a C-terminal DNA binding domain.	1.23015e-71
CP024136.1\|AUK14456.1\|78049_78331_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	2.37215e-20
CP024136.1\|AUK14460.1\|80666_81509_+\|RepB-family-plasmid-replication-initiator-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	6.74541e-13
CP024136.1\|AUK14448.1\|66746_67451_-\|IS6-family-transposase-IS15DI	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.07441e-69
CP024136.1\|AUK14465.1\|84756_85377_-\|chromosome-partitioning-protein-ParA	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	2.18908e-34
CP024136.1\|AUK14455.1\|76354_77553_+\|IS91-family-transposase	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	5.78906e-70
CP024136.1\|AUK14457.1\|78320_78572_-\|plasmid-stabilization-protein	gnl\|CDD\|179484	PRK02854, PRK02854, primosomal protein DnaT.	2.40816e-08

>CP024136.1|AUK14457.1|78320_78572_-|plasmid-stabilization-protein
MSYQILTTTAASITDLKKNPMGTVAEGEGDAVAILNRNEPAFYCVPPKLYAYYRELAEDAELNAVADERMKNPEIVKVNLDDL
>CP024136.1|AUK14456.1|78049_78331_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MTYELAFDRRALKEWQKLGHTIREQFKKKLAERLENPRVPAARLHGHADRYKIKLRASGYRLVYQVIDEKVVLLVIAVGRRESSEVYQIADMR
>CP024136.1|AUK14455.1|76354_77553_+|IS91-family-transposase
MLSGFTPRPLKRLFTANQCWTSFLDAGGLRDIEVEAVTKMLACGTRILGVKEFGCDNPDCQHVKYLTNSCGSRACPSCGKKATDLWTATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGLEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAWSEGMAMPESLSHITTESQWRSLVLKSGGKYWHVYMSKKTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLSFRYLDHKTGETATETLTQRELVARLKQHIPEKFFKMVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGCRMVYRRAIAGLNVSGLKKNARDISLLRYMPA
>CP024136.1|AUK14454.1|76156_76345_+|hypothetical-protein
MLTRKSIDTVLLSVGAEKLSQREWDWMKMLKPMDPPPAMVTTSILKRRGDTAALTLLQDTGV
>CP024136.1|AUK14453.1|73783_74578_-|aminoglycoside-O-phosphotransferase-APH(3')-IIa
MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF
>CP024136.1|AUK14452.1|72772_73477_-|IS6-family-transposase-IS15DI
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>CP024136.1|AUK14451.1|72191_72671_-|transcriptional-regulator
MLDYRFPTALQMVLSVAMAEQMGERSTSAILAYGLEANPSFIRKLMVPLTRDGIIVSTLGRNGSIHLGRPADKITLRDIYLSVIEDKKLWASRPDVPARCVVSANACWYFKSVADEAEQASLNVLARHTVASALEAVKNADTSGCDPVPEMIARFKKAH
>CP024136.1|AUK14450.1|68969_72122_+|multidrug-efflux-RND-transporter-permease-subunit-OqxB
MDFSRFFIDRPIFAAVLSILIFITGLIAIPLLPVSEYPDVVPPSVQVRAEYPGANPKVIAETVATPLEEAINGVENMMYMKSVAGSDGVLVTTVTFRPGTDPDQAQVQVQNRVAQAEARLPEDVRRLGITTQKQSPTLTLVVHLFSPGGKYDSLYMRNYATLKVKDELARLPGVGQIQIFGSGEYAMRVWLDPNKVAARGLTASDVVTAMQEQNVQVSAGQLGAEPLPQESDFLISINAQGRLHTEEEFGNIILKTAQDGSLVRLRDVARIEMGSGSYALRSQLNNKDAVGIGIFQSPGANAIDLSNAVRAKMAELATRFPEDMQWAAPYDPTVFVRDSIRAVVQTLLEAVVLVVLVVILFLQTWRASIIPLIAVPVSVVGTFSILYLLGFSLNTLSLFGLVLAIGIVVDDAIVVVENVERNIEEGLAPLAAAHQAMREVSGPIIAIALVLCAVFVPMAFLSGVTGQFYKQFAVTIAISTVISAINSLTLSPALAALLLKPHGAKKDLPTRLIDRLFGWIFRPFNRFFLRSSNGYQGLVGKTLGRRGAVFAVYLLLLCAAGVMFKVVPGGFIPTQDKLYLIGGVKMPEGSSLARTDAVIRKMSEIGMNTEGVDYAVAFPGLNALQFTNTPNTGTVFFGLKPFDQRKHTAAEINAEINAKIAQIQQGFGFSILPPPILGLGQGSGYSLYIQDRGGLGYGALQSAVNAMSGAIMQTPGMHFPISTYQANVPQLDVQVDRDKAKAQGVSLTDLFGTLQTYLGSSYVNDFNQFGRTWRVMAQADGPYRESVEDIANLRTRNNQGEMVPIGSMVNISTTYGPDPVIRYNGYPAADLIGDADPRVLSSSQAMTHLEELSKQILPNGMNIEWTDLSFQQATQGNTALIVFPVAVLLAFLVLAALYESWTLPLAVILIVPMTMLSALFGVWLTGGDNNVFVQVGLVVLMGLACKNAILIVEFARELEIQGKGIMEAALEACRLRLRPIVMTSIAFIAGTIPLILGHGAGAEVRGVTGITVFSGMLGVTLFGLFLTPVFYVTLRKLVTRRKPVQEDLPA
>CP024136.1|AUK14449.1|67770_68946_+|multidrug-efflux-RND-transporter-periplasmic-adaptor-subunit-OqxA
MSLQKTWGNIHLTALGAMMLSFLLVGCDDSVAQNAAPPAPTVSAAKVLVKSISQWDSFNGRIEAVESVQLRPRVSGYIDKVNYTDGQEVKKGQVLFTIDDRTYRAALEQAQAALARAKTQASLAQSEANRTDKLVHTNLVSREEWEQRRSAAVQAQADIRAAQAAVDAAQLNLDFTKVTAPIDGRASRALITSGNLVTAGDTASVLTTLVSQKTVYVYFDVDESTYLHYQNLARRGQGASSDNQALPVEIGLVGEEGYPHQGKVDFLDNQLTPSTGTIRMRALLDNSQRLFTPGLFARVRLPGSAEFKATLIDDKAVLTDQDRKYVYIVDKDGKAQRRDITPGRLADGLRIVQKGLNPGDSVIVDGLQKVFMPGMPVNAKTVAMTSSATLN
>CP024136.1|AUK14448.1|66746_67451_-|IS6-family-transposase-IS15DI
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>CP024136.1|AUK14458.1|79637_79868_-|hypothetical-protein
MLLISFLWRIFVFFVTLSKFIHYLWFLSSYGEIITTKAEICKVVYPPYMFPPKHGSHERIFIIYIQYDRNAQVSTF
>CP024136.1|AUK14459.1|79806_80646_+|replication-initiation-protein
MNLLSVTKKTKIRHRNEINSTFSSLPLSARRILFMAMAQIDSREELSEGATFRITAREYAFIADIDVTGAYRQLKEGAEELQASVIRIPRNQLLTAQGNQSSGHTKKRGKLPSDAVRLMNLTAFCDYVESEGYIDIAFSHVIEPYITMLKDSYTTQVLISSVRLADQNSNMLYQFIRKQYSSGKKTFFDIEVDVLKDELELFRIDNGEKVYLYQNFKDFNKVFLQKNIEKINQYTEINHLEVKIVKRVARRASKLRFSYKIDKESEGLDTRIPYGFRGA
>CP024136.1|AUK14460.1|80666_81509_+|RepB-family-plasmid-replication-initiator-protein
MEQIKLHKQGGAAVIIIPASMIENTGWEDGTLLEVLEINETLHIRRKTESGALATKACPSLFSSTMRHVNYDKIIRYNSGLNLLVNELSFSARRVFFICLYYYFENKLESDKSLLIRADKYAEFVGVERSVAYKQMKDAADFFSRNKNLITHCDYISNEGLLRVMFSSKTINYITAIDSRKYQVTELPLKSALSLQGRYSWPLYQLIKFSHLKSFTIGVDELKKEIGYIQNQKFSFFKRDGINIAIDEITERTDVKNIKCVNAERQGRRVSKVRFEIEMR
>CP024136.1|AUK14461.1|81512_81959_+|hypothetical-protein
MAKIYQFPQGEERAKFRKEIARERKKRFAVKTGSTFVKWLGWGWFYLRLLAASVLHFIFVFVLAILGAFKWAVFWLGGILCVITWYHLDHQLWTPQNLTIPVITATWILGLLAEPLMELLNKTMPWHKLLVPEPADESTENSSEISQQ
>CP024136.1|AUK14485.1|82095_82449_+|DNA-distortion-polypeptide-3
MKYLVKEFINEKYSKAVNILKDNLKEHYHVFYGVRLSEILFPTSEYGTDAFFKEFELINSVILPLVIFDFIDRKPIMVIGFEEAPGIDSLIDSGMEVVLLDGLSDLLLVEKLMPLFD
>CP024136.1|AUK14462.1|82673_82853_-|hypothetical-protein
MNGEQHTDSLLKICETIEKRLKIFCILIASQALMIEGKNHHYLINLTLISLNEETVKIN
>CP024136.1|AUK14463.1|82986_84051_-|P-loop-NTPase
MKTISLFNNKGGVGKTTLTWNLSVSLSAKGKSVLLIDFDPQCNLSIALLGETGFSDLLKKDANNPYGKTIRAFCQPFIQQDILPVVHTFPPQFPMEPGSGRLDIAPGDFWLNNLSDVISVGTDLIAGNAVNRFLIPSLIASKAQELNNCEYDYVLIDVPPSFNTIVRSALYCSDYFLVPCTADIFSAYCIGLIGETLPKFRDDWEQGIRRTSAQNNSLISQKGSPKFAGWVFNGFDKRKNPGQQNSSEIAADAAHRDKIIDSVKNDLRPKLASIKTYSAVASFTPDTPVAKVEDLNVMAPDSILQGVPLRYLSTVAPTRGVLARGAWSGPQKALMQTMSAEHDVLADYIIQNFV
>CP024136.1|AUK14464.1|84474_84705_-|DNA-partition-complex-ParG
MSLEKAHTSVKKMTFGENRDLERVVTAPVSSGKIKRVNVNFDEEKHTRFKAACARKGTSITDVVNQLVDNWLKENE
>CP024136.1|AUK14465.1|84756_85377_-|chromosome-partitioning-protein-ParA
MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSKAGKAAFDVFTAASEKDVYGIRKDLADYDFAIVDGAGSLSVITSAAVMVSDLVIIPVTPSPLDFSAAGSVVTVLEAQAYSRKVEARFLITRKIEMATMLNVLKESIKDTGVKAFRTAITQRQVYVKSILDGDSVFESSDGAAKGEIEILTKEIVRMFE
>CP024136.1|AUK14466.1|85671_86316_+|resolvase
MTSNVPTSFVRAYLRASTAEQDASRALETIEAFARERGLIICSYYIENESGTRLERPELFRLLRDCQQNDILLIEDVDRLSRLSGEDWNTLKKMIRQKDIRVMAVNVPTTWINSGMSEFDSRLFAAINDMLLDMLAAVARRDYEQRRERQKQGIEKAKKDGKYKGRKPNQARHDAIIRLIESGSSWTQVQKVLGCSRGTISNALKRKTGQKSSK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_KX518744	Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence	63874-63907	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP041286	Escherichia coli strain 54 plasmid p54-tetX, complete sequence	64169-64202	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_KU321583	Escherichia coli strain E80 plasmid pE80, complete sequence	38215-38248	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_KT990220	Escherichia coli strain 42-2 plasmid p42-2, complete sequence	37006-37039	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP010164	Escherichia coli strain H2 plasmid A, complete sequence	20751-20784	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP019647	Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence	239581-239614	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP022964	Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence	30266-30299	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP024467	Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence	17630-17663	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	16611-16644	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	53074-53107	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP019284	Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence	32601-32634	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP047093	Salmonella sp. S13 plasmid pS13-4, complete sequence	1762-1795	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP051432	Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence	23725-23758	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP046002	Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence	35337-35370	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP045188	Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence	26770-26803	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	41390-41423	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	60962-60995	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP032386	Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence	39391-39424	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP032389	Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence	9889-9922	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_LT904873	Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2	5696-5729	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_KT754163	Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence	12265-12298	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP033383	Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence	7366-7399	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP020836	Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence	20407-20440	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP038140	Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence	93494-93527	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP043216	Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence	32193-32226	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP042617	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence	25537-25570	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP031361	Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence	27033-27066	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP044153	Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence	25749-25782	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP040929	Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence	2187-2220	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP033386	Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence	34721-34754	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP041177	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence	4942-4975	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP034761	Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence	47580-47613	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP050707	Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence	14631-14664	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP047339	Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence	28949-28982	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NC_010860	Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence	32623-32656	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP022453	Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence	5893-5926	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP024153	Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence	53536-53569	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP030208	Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence	39815-39848	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP005994	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence	30028-30061	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP032450	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence	29110-29143	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP010155	Escherichia coli strain D9 plasmid C, complete genome	14497-14530	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP050174	Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence	58667-58700	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP029061	Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence	10786-10819	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP042589	Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence	29459-29492	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP025677	Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence	79278-79311	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP041453	Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence	54169-54202	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MN816373	Escherichia coli strain A127 plasmid pA127-X1, complete sequence	29459-29492	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP052879	Escherichia coli strain C21 plasmid pC21-2, complete sequence	61147-61180	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP033379	Escherichia coli strain L73 plasmid pL73-2, complete sequence	99797-99830	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	88012-88045	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP050724	Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence	41949-41982	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP047573	Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence	53619-53652	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NC_019106	Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence	32551-32584	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP010127	Escherichia coli strain C8 plasmid B, complete genome	33248-33281	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	85971-86004	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP022072	Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence	18650-18683	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	20398-20431	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	147056-147089	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP045998	Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence	35339-35372	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP032394	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence	32800-32833	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NC_019256	Shigella sp. LN126 plasmid pLN126_33, complete sequence	2112-2145	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MH884649	Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence	16816-16849	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MH884651	Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence	68260-68293	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MH229869	Escherichia coli plasmid pKANJ7, complete sequence	90-123	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP050713	Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence	33434-33467	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP041439	Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence	96892-96925	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP041443	Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence	63333-63366	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MK461931	Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence	238663-238696	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MK656937	Escherichia coli strain T3 plasmid pT3, complete sequence	37880-37913	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MK731977	Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence	22155-22188	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MK673546	Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence	28203-28236	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP032447	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence	18380-18413	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	118004-118037	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	151970-152003	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MH287085	Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence	243053-243086	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MH287084	Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence	241163-241196	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP025558	Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence	11939-11972	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	90443-90476	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MT219826	Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence	43726-43759	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MG904998	Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence	48918-48951	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MG197491	Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence	33352-33385	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MG197498	Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence	58347-58380	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MG197503	Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence	61256-61289	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MG197495	Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence	61256-61289	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MF589339	Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence	27964-27997	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MG197502	Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence	61256-61289	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MT219818	Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence	43736-43769	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MT219820	Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence	80789-80822	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MT219822	Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence	38970-39003	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MT219823	Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence	73817-73850	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NC_023323	Escherichia coli ACN001 plasmid pACN001-A, complete sequence	18865-18898	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MF554637	uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence	14942-14975	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP016575	Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence	296-329	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP020060	Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence	30572-30605	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP032994	Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence	10049-10082	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MN783746	Escherichia coli plasmid pIncX1_p1, complete sequence	5290-5323	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_KX815983	Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence	40397-40430	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_KU254580	Escherichia coli strain YD786 plasmid pYD786-3, complete sequence	25507-25540	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP042633	Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence	38916-38949	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP032392	Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence	67739-67772	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP019272	Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence	35028-35061	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP053728	Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence	69102-69135	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP037995	Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281	7255-7288	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP053740	Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence	9971-10004	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP016580	Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence	23703-23736	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP046001	Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence	49989-50022	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP021103	Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence	56470-56503	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP029182	Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence	2302-2335	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MN086778	Escherichia coli plasmid p16EC-IncN, complete sequence	90173-90206	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP053047	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence	9874-9907	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP014974	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence	295-328	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP032397	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence	220331-220364	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP035774	Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence	12757-12790	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP044182	Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence	25543-25576	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP042608	Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence	7171-7204	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MK461930	Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence	45261-45294	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NC_019046	Escherichia coli plasmid pNMEC31_31, complete sequence	31361-31394	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP047460	Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence	89191-89224	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP047466	Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence	30748-30781	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP035315	Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence	28493-28526	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP050748	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence	5878-5911	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NC_024961	Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence	905-938	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NC_021842	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence	4017-4050	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_LT985261	Escherichia coli strain 657 plasmid RCS50_p, complete sequence	42585-42618	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_AP019678	Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence	49115-49148	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP009074	Escherichia coli ATCC 25922 plasmid unnamed, complete sequence	21137-21170	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP010168	Escherichia coli strain H3 plasmid A, complete genome	25682-25715	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NC_010378	Escherichia coli plasmid pOLA52, complete sequence	34562-34595	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	CP016512	Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence	23704-23737	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP016529	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence	23704-23737	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP016518	Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence	23705-23738	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP032988	Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence	50710-50743	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP017633	Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence	23885-23918	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP012922	Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence	23704-23737	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP033093	Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence	19532-19565	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP012926	Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence	37369-37402	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP023360	Escherichia coli strain 1943 plasmid p54, complete sequence	52726-52759	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	CP043734	Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence	37807-37840	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP039600	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence	32872-32905	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP030283	Escherichia coli strain E308 plasmid pLKSZ02, complete sequence	49947-49980	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NC_011204	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence	70648-70681	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NC_017624	Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence	23689-23722	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP050710	Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence	15569-15602	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP024290	Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence	33653-33686	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP048777	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence	1446-1479	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP041631	Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence	4799-4832	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP050773	Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence	30707-30740	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP041444	Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence	38005-38038	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP019180	Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence	24566-24599	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP050765	Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence	6593-6626	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NC_010422	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence	59434-59467	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP050759	Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence	5734-5767	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_AP022652	Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence	295-328	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP024136	Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence	79478-79511	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_LT985315	Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence	47119-47152	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MN436006	Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence	27492-27525	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MN436007	Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence	27131-27164	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	44664-44697	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP045839	Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence	48284-48317	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP032381	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence	12454-12487	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MG825381	Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence	43402-43435	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MT197111	Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence	12897-12930	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MT219817	Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence	59284-59317	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MT219819	Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence	118931-118964	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	MT219821	Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence	3734-3767	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MG288677	Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence	29004-29037	0	1.0
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP030195	Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence	159-192	1	0.971
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP033353	Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence	78450-78483	2	0.941
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP050780	Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence	203947-203980	2	0.941
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP022061	Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence	1711-1744	2	0.941
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	CP048927	Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence	45611-45644	2	0.941
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP029841	Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence	98434-98467	2	0.941
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP028313	Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence	41569-41602	2	0.941
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP018662	Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence	41992-42025	2	0.941
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	CP049987	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence	41386-41419	2	0.941
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	CP049982	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence	42740-42773	2	0.941
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NC_010421	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence	27662-27695	2	0.941
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_MK625201	Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence	41824-41857	2	0.941
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP023476	Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence	33473-33506	2	0.941
CP024136_1	1.1\|79478\|34\|CP024136\|CRISPRCasFinder	79478-79511	34	NZ_CP044292	Escherichia coli strain P43A plasmid pP43A-1, complete sequence	44259-44292	4	0.882

1. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_KX518744 (Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

2. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP041286 (Escherichia coli strain 54 plasmid p54-tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

3. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_KU321583 (Escherichia coli strain E80 plasmid pE80, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

4. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_KT990220 (Escherichia coli strain 42-2 plasmid p42-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

5. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP010164 (Escherichia coli strain H2 plasmid A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

6. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP019647 (Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

7. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP022964 (Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

8. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP024467 (Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

9. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

10. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

11. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP019284 (Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

12. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP047093 (Salmonella sp. S13 plasmid pS13-4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

13. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP051432 (Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

14. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP046002 (Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

15. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP045188 (Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

16. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

17. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

18. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP032386 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

19. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP032389 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

20. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_LT904873 (Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

21. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_KT754163 (Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

22. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP033383 (Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

23. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP020836 (Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

24. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP038140 (Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

25. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP043216 (Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

26. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP042617 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

27. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP031361 (Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

28. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP044153 (Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

29. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP040929 (Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

30. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP033386 (Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

31. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP041177 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

32. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP034761 (Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

33. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP050707 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

34. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP047339 (Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

35. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NC_010860 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

36. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP022453 (Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

37. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP024153 (Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

38. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP030208 (Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

39. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP005994 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

40. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP032450 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

41. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP010155 (Escherichia coli strain D9 plasmid C, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

42. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP050174 (Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

43. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP029061 (Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

44. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP042589 (Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

45. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP025677 (Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

46. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP041453 (Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

47. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MN816373 (Escherichia coli strain A127 plasmid pA127-X1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

48. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP052879 (Escherichia coli strain C21 plasmid pC21-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

49. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP033379 (Escherichia coli strain L73 plasmid pL73-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

50. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

51. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP050724 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

52. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP047573 (Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

53. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NC_019106 (Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

54. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP010127 (Escherichia coli strain C8 plasmid B, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

55. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

56. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP022072 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

57. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

58. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

59. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP045998 (Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

60. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP032394 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

61. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NC_019256 (Shigella sp. LN126 plasmid pLN126_33, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

62. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MH884649 (Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

63. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MH884651 (Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

64. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MH229869 (Escherichia coli plasmid pKANJ7, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

65. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP050713 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

66. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP041439 (Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

67. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP041443 (Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

68. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MK461931 (Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

69. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MK656937 (Escherichia coli strain T3 plasmid pT3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

70. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MK731977 (Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

71. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MK673546 (Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

72. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP032447 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

73. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

74. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

75. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MH287085 (Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

76. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MH287084 (Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

77. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP025558 (Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

78. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

79. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MT219826 (Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

80. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MG904998 (Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

81. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MG197491 (Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

82. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MG197498 (Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

83. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MG197503 (Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

84. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MG197495 (Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

85. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MF589339 (Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

86. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MG197502 (Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

87. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MT219818 (Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

88. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MT219820 (Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

89. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MT219822 (Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

90. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MT219823 (Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

91. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NC_023323 (Escherichia coli ACN001 plasmid pACN001-A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

92. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MF554637 (uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

93. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP016575 (Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

94. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP020060 (Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

95. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP032994 (Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

96. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MN783746 (Escherichia coli plasmid pIncX1_p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

97. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_KX815983 (Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

98. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_KU254580 (Escherichia coli strain YD786 plasmid pYD786-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

99. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP042633 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

100. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP032392 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

101. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP019272 (Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

102. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP053728 (Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

103. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP037995 (Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

104. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP053740 (Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

105. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP016580 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

106. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP046001 (Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

107. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP021103 (Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

108. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP029182 (Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

109. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MN086778 (Escherichia coli plasmid p16EC-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

110. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP053047 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

111. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP014974 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

112. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP032397 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

113. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP035774 (Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

114. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP044182 (Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

115. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP042608 (Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

116. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MK461930 (Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

117. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NC_019046 (Escherichia coli plasmid pNMEC31_31, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

118. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP047460 (Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

119. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP047466 (Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

120. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP035315 (Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

121. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP050748 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

122. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NC_024961 (Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

123. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NC_021842 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

124. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_LT985261 (Escherichia coli strain 657 plasmid RCS50_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

125. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_AP019678 (Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

126. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP009074 (Escherichia coli ATCC 25922 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

127. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP010168 (Escherichia coli strain H3 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

128. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NC_010378 (Escherichia coli plasmid pOLA52, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

129. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to CP016512 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

130. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP016529 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

131. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP016518 (Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

132. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP032988 (Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

133. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP017633 (Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

134. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP012922 (Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

135. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP033093 (Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

136. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP012926 (Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

137. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP023360 (Escherichia coli strain 1943 plasmid p54, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

138. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to CP043734 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

139. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP039600 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

140. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP030283 (Escherichia coli strain E308 plasmid pLKSZ02, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

141. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NC_011204 (Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

142. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NC_017624 (Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

143. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP050710 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

144. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP024290 (Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

145. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP048777 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

146. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP041631 (Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

147. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP050773 (Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

148. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP041444 (Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

149. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP019180 (Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

150. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP050765 (Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

151. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NC_010422 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

152. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP050759 (Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

153. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_AP022652 (Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

154. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP024136 (Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

155. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_LT985315 (Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

156. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MN436006 (Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

157. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MN436007 (Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

158. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

159. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP045839 (Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

160. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP032381 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

161. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MG825381 (Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

162. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MT197111 (Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

163. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MT219817 (Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

164. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MT219819 (Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

165. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to MT219821 (Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

166. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MG288677 (Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

167. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP030195 (Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence) position: , mismatch: 1, identity: 0.971

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtgattttcatgaaaggtggatggctgcgcac	Protospacer
****.*****************************

168. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP033353 (Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgggc	Protospacer
******************************* .*

169. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP050780 (Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgggc	Protospacer
******************************* .*

170. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP022061 (Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

171. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to CP048927 (Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

172. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP029841 (Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

173. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP028313 (Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

174. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP018662 (Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

175. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to CP049987 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

176. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to CP049982 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

177. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NC_010421 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

178. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_MK625201 (Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

179. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP023476 (Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

180. spacer 1.1|79478|34|CP024136|CRISPRCasFinder matches to NZ_CP044292 (Escherichia coli strain P43A plasmid pP43A-1, complete sequence) position: , mismatch: 4, identity: 0.882

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgttcga	Protospacer
*****************************. *.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

14959 : 63183

Escherichia_phage(30.77%)

integrase,transposase,protease

attL 20137:20154|attR 66691:66708

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK14404.1\|14959_16330_-\|transposase	IS1182 family transposase ISCfr1	NA	NA	NA	NA
AUK14405.1\|16444_17581_-	DUF3883 domain-containing protein	NA	NA	NA	NA
AUK14406.1\|17631_17877_-	hypothetical protein	NA	NA	NA	NA
AUK14407.1\|17882_18074_+	hypothetical protein	NA	NA	NA	NA
AUK14408.1\|18555_19098_-	tunicamycin resistance protein	NA	NA	NA	NA
AUK14409.1\|19110_19971_-	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
20137:20154	attL	NA	NA	NA	NA
AUK14410.1\|20203_20908_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUK14411.1\|21320_22112_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
AUK14412.1\|22204_23464_-	chloramphenicol efflux MFS transporter CmlA1	S4TR35	Salmonella_phage	4.8e-26	31.7
AUK14477.1\|23725_24517_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AUK14413.1\|24662_25676_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AUK14414.1\|25614_26229_+	DUF3330 domain-containing protein	NA	NA	NA	NA
AUK14415.1\|26404_26965_+\|transposase	transposase	A0A1B0V7I5	Salmonella_phage	1.1e-59	100.0
AUK14416.1\|29979_30222_+	relaxase	NA	NA	NA	NA
AUK14417.1\|30253_30931_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUK14418.1\|31009_32209_+	tetracycline resistance MFS efflux pump	NA	NA	NA	NA
AUK14419.1\|32240_33125_-	EamA family transporter	NA	NA	NA	NA
AUK14478.1\|33262_33655_-	cysteine hydrolase	NA	NA	NA	NA
AUK14420.1\|35642_36050_-	hypothetical protein	NA	NA	NA	NA
AUK14421.1\|36111_36309_+	DUF2384 domain-containing protein	NA	NA	NA	NA
AUK14422.1\|36695_37400_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUK14423.1\|37810_37996_-	hypothetical protein	NA	NA	NA	NA
AUK14424.1\|38155_38281_+	ABC transporter	NA	NA	NA	NA
AUK14425.1\|39596_40568_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	2.4e-49	38.1
AUK14426.1\|40863_41049_+	hypothetical protein	NA	NA	NA	NA
AUK14427.1\|41903_42695_-	sulfonamide-resistant dihydropteroate synthase Sul3	A0A0B5J4J5	Pandoravirus	1.2e-14	26.5
AUK14479.1\|42785_43013_-	hypothetical protein	NA	NA	NA	NA
AUK14428.1\|43163_43409_-	hypothetical protein	NA	NA	NA	NA
AUK14429.1\|43446_44310_-	short-chain dehydrogenase/reductase	W8CYX9	Bacillus_phage	2.5e-05	31.0
AUK14480.1\|44455_44695_-	macrolide transporter	A0A2K5B2B5	Erysipelothrix_phage	9.5e-08	46.2
AUK14430.1\|44767_45472_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUK14431.1\|45821_46286_-	mRNA interferase PemK	NA	NA	NA	NA
AUK14432.1\|46505_47159_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AUK14433.1\|47348_47735_-	hypothetical protein	NA	NA	NA	NA
AUK14434.1\|48096_48966_-	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
AUK14481.1\|48946_49021_-	positive regulator of RepFIC repA1 expression	NA	NA	NA	NA
AUK14482.1\|49050_49215_+	replication protein RepA	NA	NA	NA	NA
AUK14435.1\|49258_49513_-	replication regulatory protein repA2	NA	NA	NA	NA
AUK14436.1\|49752_50343_-	DUF2726 domain-containing protein	NA	NA	NA	NA
AUK14437.1\|50381_50525_-	hypothetical protein	NA	NA	NA	NA
AUK14438.1\|51306_51867_-	conjugal transfer protein	NA	NA	NA	NA
AUK14439.1\|51921_52668_-	type-F conjugative transfer system pilin acetylase TraX	A0A077JBM8	Xanthomonas_phage	1.2e-08	30.6
AUK14440.1\|52687_57958_-	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA
AUK14483.1\|60396_61131_-	complement resistance protein TraT	NA	NA	NA	NA
AUK14441.1\|61159_61663_-	surface exclusion protein	NA	NA	NA	NA
AUK14484.1\|61677_61893_-	conjugal transfer protein TraG	NA	NA	NA	NA
AUK14442.1\|61917_62622_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUK14443.1\|62655_63183_-\|integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	3.1e-19	35.9
66691:66708	attR	NA	NA	NA	NA

DBSCAN-SWA_2

86786 : 93667

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK14468.1\|86786_86957_+	pilus assembly protein	A0A2L1IV26	Escherichia_phage	2.6e-07	83.9
AUK14469.1\|87690_88014_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AUK14470.1\|88119_89253_+	permease	NA	NA	NA	NA
AUK14471.1\|89395_90100_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUK14472.1\|90076_90391_+	hypothetical protein	U5P0U6	Shigella_phage	5.4e-35	100.0
AUK14473.1\|90384_90693_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	8.8e-14	50.6
AUK14474.1\|90836_91268_-	silver-binding protein SilE	NA	NA	NA	NA
AUK14475.1\|91518_92994_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	1.0e-27	30.1
AUK14476.1\|92986_93667_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.1e-31	36.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP024134

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP024134_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024134_1

1033834-1034227

Unclear

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACC	CRT

6 spacers

The CRISPR arrays of CP024134_1

>merge|CP024134|1|1033834-1034227|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCCCATAATATTAATATAATCCACATGAGGGTGTTCCCCGCGCCAGCGGGGATAAACCTGTGTTTGCGGCATTAACGCTCACCAGCATTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGACGTGGTCATGGGTGCTGCTGTTGCAGAGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCAGATACACGGCTTTGTATTCCGTGCGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAGCAATAGTCCATAGATTTGCGAAAACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGCCTGACGAGACTACTGAGGCCGTTCTGTCGAGTTCCCCGCGCCAGCGGGGATAAACC

>CP024134|1|1|1033834-1034227|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGGCCCATAATATTAATATAATCCACATGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

>CP024134|1|1|1033834-1034227|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGGCCCATAATATTAATATAATCCACATGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

>CP024134|1|1|1033834-1034227|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGGCCCATAATATTAATATAATCCACATGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

Protein	Signature genes	Signature genes Name	Protein_function
CP024134.1\|AUK10282.1\|1044061_1044322_-\|ferredoxin-like-protein-YgcO	unknown	unknown	gnl\|CDD\|225289
CP024134.1\|AUK10270.1\|1028574_1030212_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP024134.1\|AUK10281.1\|1043469_1044045_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
CP024134.1\|AUK10268.1\|1027149_1027485_+\|mRNA-interferase-MazF	unknown	unknown	gnl\|CDD\|182138
CP024134.1\|AUK10274.1\|1034866_1036345_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
CP024134.1\|AUK10277.1\|1038822_1040277_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
CP024134.1\|AUK10283.1\|1044312_1045584_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
CP024134.1\|AUK10275.1\|1036371_1037649_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
CP024134.1\|AUK10279.1\|1041685_1042465_+\|electron-transfer-flavoprotein	unknown	unknown	gnl\|CDD\|224997
CP024134.1\|AUK10276.1\|1037967_1038753_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|187605
CP024134.1\|AUK10272.1\|1032543_1032684_-\|hypothetical-protein	unknown	unknown	unknown
CP024134.1\|AUK10264.1\|1020427_1023184_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
CP024134.1\|AUK10278.1\|1040370_1041708_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
CP024134.1\|AUK10271.1\|1030299_1031598_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP024134.1\|AUK10265.1\|1023240_1024542_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
CP024134.1\|AUK10267.1\|1026901_1027150_+\|antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
CP024134.1\|AUK10273.1\|1032822_1033494_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP024134.1\|AUK10269.1\|1027555_1028347_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP024134.1\|AUK10280.1\|1042461_1043322_+\|electron-transfer-flavoprotein	unknown	unknown	gnl\|CDD\|224936
CP024134.1\|AUK10266.1\|1024589_1026824_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797

Protein	Function_ID	Function_description	E-value
CP024134.1\|AUK10282.1\|1044061_1044322_-\|ferredoxin-like-protein-YgcO	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.81311e-41
CP024134.1\|AUK10270.1\|1028574_1030212_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP024134.1\|AUK10281.1\|1043469_1044045_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
CP024134.1\|AUK10268.1\|1027149_1027485_+\|mRNA-interferase-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
CP024134.1\|AUK10274.1\|1034866_1036345_-\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.27376e-109
CP024134.1\|AUK10277.1\|1038822_1040277_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.73778e-83
CP024134.1\|AUK10283.1\|1044312_1045584_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	9.16926e-127
CP024134.1\|AUK10269.1\|1027555_1028347_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
CP024134.1\|AUK10279.1\|1041685_1042465_+\|electron-transfer-flavoprotein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
CP024134.1\|AUK10276.1\|1037967_1038753_+\|oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
CP024134.1\|AUK10264.1\|1020427_1023184_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
CP024134.1\|AUK10278.1\|1040370_1041708_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.77218e-49
CP024134.1\|AUK10271.1\|1030299_1031598_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP024134.1\|AUK10265.1\|1023240_1024542_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
CP024134.1\|AUK10267.1\|1026901_1027150_+\|antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
CP024134.1\|AUK10273.1\|1032822_1033494_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
CP024134.1\|AUK10266.1\|1024589_1026824_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP024134.1\|AUK10280.1\|1042461_1043322_+\|electron-transfer-flavoprotein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
CP024134.1\|AUK10275.1\|1036371_1037649_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.60446e-29

>CP024134.1|AUK10273.1|1032822_1033494_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>CP024134.1|AUK10272.1|1032543_1032684_-|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>CP024134.1|AUK10271.1|1030299_1031598_+|enolase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP024134.1|AUK10270.1|1028574_1030212_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>CP024134.1|AUK10269.1|1027555_1028347_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>CP024134.1|AUK10268.1|1027149_1027485_+|mRNA-interferase-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>CP024134.1|AUK10267.1|1026901_1027150_+|antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>CP024134.1|AUK10266.1|1024589_1026824_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>CP024134.1|AUK10265.1|1023240_1024542_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>CP024134.1|AUK10264.1|1020427_1023184_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQLLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG
>CP024134.1|AUK10274.1|1034866_1036345_-|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>CP024134.1|AUK10275.1|1036371_1037649_-|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
>CP024134.1|AUK10276.1|1037967_1038753_+|oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>CP024134.1|AUK10277.1|1038822_1040277_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>CP024134.1|AUK10278.1|1040370_1041708_+|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTILAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>CP024134.1|AUK10279.1|1041685_1042465_+|electron-transfer-flavoprotein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>CP024134.1|AUK10280.1|1042461_1043322_+|electron-transfer-flavoprotein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>CP024134.1|AUK10281.1|1043469_1044045_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>CP024134.1|AUK10282.1|1044061_1044322_-|ferredoxin-like-protein-YgcO
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>CP024134.1|AUK10283.1|1044312_1045584_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEEEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLEPSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL

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Crispr_ID: CP024134_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024134_2

1059777-1060659

TypeI-E

I-E

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

14 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP024134_2

>merge|CP024134|2|1059777-1060659|PILER-CR,CRISPRCasFinder,CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCGACAATCCCACGCCGATAATCTCTATACAGCAAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGCACGGAATTGTTATGCTGTTCCCCTGACCGGAGTTCCCCGCGCCAGCGGGGATAAACCGATCCGCCGCCGGTTAACGCTGGACCAGTTCCGGAGTTCCCCGCGCCAGCGGGGATAAACCGGGCGAGTCCGTCAGCGGTGCGCCGCTGCAACAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGACAATGTGAAAAGCTTAATATTCATTACATGAGTTCCCCGCGCCAGCGGGGATAAACCGATTTCATCAAAGCATTAAGGGATGGAATAAAGGAGTTCCCCGCGCCAGCGGGGATAAACCGTCATGAATATGGGGAAAACGAACAATCTGTTTGAGTTCCCCGCGCCAGCGGGGATAAACCGATGACCATTGGTGAACGCATCCGCTTTCGCCGGAGTTCCCCGCGCCAGCGGGGATAAACCGTACAGTTTCCATAAATTCACCTCGTTTATATAGAGTTCCCCGCGCCAGCGGGGATAAACCGATCGGACGATGGCGATCGCAATCGCGCGGGAAGAGTTCCCCGCGCCAGCGGGGATAAACCGAGGACGAAACGACCGGAAAACTGGCGACGGGCGAGTTCCCCGCGCCAGCGGGGATAAACCGGGATATAGAGCGGGTACTCGAGCGAAGCGGGGGAGTTCCCCGCGCCAGCGGGGATAAACCGTTTTTGTTCTCTTCAAAACGCCGAACAACCAAGAGTTCCCCGCGTCAGCGAGGATAAACCGGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCC

>CP024134|2|2|1059777-1060537|PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCCCACGCCGATAATCTCTATACAGCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGGAATTGTTATGCTGTTCCCCTGACCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGACAATGTGAAAAGCTTAATATTCATTACAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCATCAAAGCATTAAGGGATGGAATAAAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGAATATGGGGAAAACGAACAATCTGTTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATGACCATTGGTGAACGCATCCGCTTTCGCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TACAGTTTCCATAAATTCACCTCGTTTATATA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCGGACGATGGCGATCGCAATCGCGCGGGAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGGACGAAACGACCGGAAAACTGGCGACGGGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG

>CP024134|2|2|1059777-1060659|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCCCACGCCGATAATCTCTATACAGCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGGAATTGTTATGCTGTTCCCCTGACCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGACAATGTGAAAAGCTTAATATTCATTACAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCATCAAAGCATTAAGGGATGGAATAAAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGAATATGGGGAAAACGAACAATCTGTTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATGACCATTGGTGAACGCATCCGCTTTCGCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TACAGTTTCCATAAATTCACCTCGTTTATATA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCGGACGATGGCGATCGCAATCGCGCGGGAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGGACGAAACGACCGGAAAACTGGCGACGGGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA
GAGTTCCCCGCGTCAGCGAGGATAAACCG	GACGCACTGGATGCGATGATGGATATCACTTG
GAGTTCCCCGCCCCTGCGGTAGAACTCCC

>CP024134|2|2|1059777-1060659|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCCCACGCCGATAATCTCTATACAGCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGGAATTGTTATGCTGTTCCCCTGACCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGACAATGTGAAAAGCTTAATATTCATTACAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCATCAAAGCATTAAGGGATGGAATAAAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGAATATGGGGAAAACGAACAATCTGTTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATGACCATTGGTGAACGCATCCGCTTTCGCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TACAGTTTCCATAAATTCACCTCGTTTATATA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCGGACGATGGCGATCGCAATCGCGCGGGAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGGACGAAACGACCGGAAAACTGGCGACGGGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA
GAGTTCCCCGCGTCAGCGAGGATAAACCG	GACGCACTGGATGCGATGATGGATATCACTTG
GAGTTCCCCGCCCCTGCGGTAGAACTCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP024134.1\|AUK10294.1\|1058467_1059385_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP024134.1\|AUK10302.1\|1066517_1066997_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP024134.1\|AUK10301.1\|1065807_1066518_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP024134.1\|AUK10293.1\|1057852_1058452_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP024134.1\|AUK10288.1\|1051020_1053687_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
CP024134.1\|AUK10298.1\|1064305_1064911_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP024134.1\|AUK10286.1\|1048141_1049854_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402
CP024134.1\|AUK14146.1\|1059386_1059671_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP024134.1\|AUK10295.1\|1060679_1061717_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP024134.1\|AUK10292.1\|1057191_1057866_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
CP024134.1\|AUK10291.1\|1056097_1057189_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
CP024134.1\|AUK10304.1\|1068023_1068785_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP024134.1\|AUK10290.1\|1055602_1056085_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187801
CP024134.1\|AUK10300.1\|1065477_1065789_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP024134.1\|AUK10289.1\|1054101_1055610_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|236613
CP024134.1\|AUK10287.1\|1049927_1050662_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP024134.1\|AUK10297.1\|1062878_1064306_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
CP024134.1\|AUK10303.1\|1066993_1068043_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP024134.1\|AUK10299.1\|1064960_1065284_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371891
CP024134.1\|AUK10296.1\|1061968_1062877_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375

Protein	Function_ID	Function_description	E-value
CP024134.1\|AUK10294.1\|1058467_1059385_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	6.7398e-158
CP024134.1\|AUK10302.1\|1066517_1066997_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
CP024134.1\|AUK10301.1\|1065807_1066518_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
CP024134.1\|AUK10293.1\|1057852_1058452_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	4.3792e-101
CP024134.1\|AUK10288.1\|1051020_1053687_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	0
CP024134.1\|AUK10298.1\|1064305_1064911_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
CP024134.1\|AUK10286.1\|1048141_1049854_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP024134.1\|AUK14146.1\|1059386_1059671_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.46262e-62
CP024134.1\|AUK10295.1\|1060679_1061717_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP024134.1\|AUK10292.1\|1057191_1057866_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	6.70134e-100
CP024134.1\|AUK10291.1\|1056097_1057189_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	3.0298e-151
CP024134.1\|AUK10304.1\|1068023_1068785_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
CP024134.1\|AUK10290.1\|1055602_1056085_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187801	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.83779e-33
CP024134.1\|AUK10300.1\|1065477_1065789_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
CP024134.1\|AUK10289.1\|1054101_1055610_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|236613	PRK09693, PRK09693, Cascade antiviral complex protein; Validated.	0
CP024134.1\|AUK10287.1\|1049927_1050662_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	6.7075e-138
CP024134.1\|AUK10297.1\|1062878_1064306_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP024134.1\|AUK10303.1\|1066993_1068043_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP024134.1\|AUK10299.1\|1064960_1065284_+\|hypothetical-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
CP024134.1\|AUK10296.1\|1061968_1062877_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0

>CP024134.1|AUK14146.1|1059386_1059671_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTESGFEFQTFGVNRRTPVDLDGLRLVSFLPV
>CP024134.1|AUK10294.1|1058467_1059385_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSCVRATYALLAKQYGVTWNGRRYDPKDWEKGDTVNQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
>CP024134.1|AUK10293.1|1057852_1058452_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVITINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
>CP024134.1|AUK10292.1|1057191_1057866_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPQATMVMSELEKAVLKPRYTPYLGRRSCPLTQPLFLGTCQASDPQKVLLNYEPVGGDIYSEESVDGHHLKFTVRDEPMITLPRQFASREWYVIKGGMDVSQ
>CP024134.1|AUK10291.1|1056097_1057189_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGESSLRTIHLAQLRDVLRQKLSERFDQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIALSGRMATSGMMSELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLGGASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKANDGFLQPSLQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITGQVQQMPTLEQLKSWVRNNGEA
>CP024134.1|AUK10290.1|1055602_1056085_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MADEIDAMALYRAWQQLDNGACAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKPEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLAHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA
>CP024134.1|AUK10289.1|1054101_1055610_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIDPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPITTFVRGIDLRSTVLLNVLTIPRLQKQFPNESHTENQPTWVKPVKPNESVPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
>CP024134.1|AUK10288.1|1051020_1053687_+|CRISPR-associated-helicase/endonuclease-Cas3
MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTNTFLFNEDAPSDINALRTYFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPIYLADMLPDLTMLERMIAAANAGAQVCLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISDFGKNGERNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPVATILLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEMDEPEWVIKGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYVQTSSGKQLLDGQVYEDLSYEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGKQNQDGWFWQGNSIVITYTRDEGMTRVIPANPK
>CP024134.1|AUK10287.1|1049927_1050662_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAQLEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECGLHEG
>CP024134.1|AUK10286.1|1048141_1049854_+|sulfite-reductase-subunit-beta
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIAHGNKKTYARTASEFGYLPLVHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGGETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>CP024134.1|AUK10295.1|1060679_1061717_-|aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>CP024134.1|AUK10296.1|1061968_1062877_+|sulfate-adenylyltransferase-subunit-2
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>CP024134.1|AUK10297.1|1062878_1064306_+|sulfate-adenylyltransferase
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>CP024134.1|AUK10298.1|1064305_1064911_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>CP024134.1|AUK10299.1|1064960_1065284_+|hypothetical-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>CP024134.1|AUK10300.1|1065477_1065789_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>CP024134.1|AUK10301.1|1065807_1066518_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>CP024134.1|AUK10302.1|1066517_1066997_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>CP024134.1|AUK10303.1|1066993_1068043_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>CP024134.1|AUK10304.1|1068023_1068785_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: CP024134_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024134_3

1638230-1638347

Orphan

Consensus_repeat	Method
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024134_3

>merge|CP024134|3|1638230-1638347|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGCTGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAACCGAGCCGTAGGCCGGATAAGGCGTTTACGC

>CP024134|3|3|1638230-1638347|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	TGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAA
CCGAGCCGTAGGCCGGATAAGGCGTTTACGC

Protein	Signature genes	Signature genes Name	Protein_function
CP024134.1\|AUK14168.1\|1637002_1638133_-\|ribonucleoside-diphosphate-reductase-1-subunit-beta	unknown	unknown	gnl\|CDD\|181647
CP024134.1\|AUK10827.1\|1636748_1637003_-\|ferredoxin	unknown	unknown	gnl\|CDD\|182668
CP024134.1\|AUK10834.1\|1651114_1655719_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225248
CP024134.1\|AUK10823.1\|1633142_1634501_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|236889
CP024134.1\|AUK10828.1\|1638366_1640652_-\|ribonucleoside-diphosphate-reductase-1-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
CP024134.1\|AUK10831.1\|1646096_1648724_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
CP024134.1\|AUK10830.1\|1645227_1645950_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
CP024134.1\|AUK10825.1\|1635623_1635830_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182050
CP024134.1\|AUK10826.1\|1636044_1636695_+\|protein-InaA	unknown	unknown	gnl\|CDD\|182136
CP024134.1\|AUK10820.1\|1628805_1629996_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
CP024134.1\|AUK10819.1\|1627713_1628613_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182167
CP024134.1\|AUK10829.1\|1641347_1645100_+\|AIDA-I-family-autotransporter-YfaL	unknown	unknown	gnl\|CDD\|182059
CP024134.1\|AUK10822.1\|1631241_1632870_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
CP024134.1\|AUK10833.1\|1650557_1651181_+\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
CP024134.1\|AUK10832.1\|1648872_1650561_+\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
CP024134.1\|AUK10824.1\|1634505_1635582_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
CP024134.1\|AUK10821.1\|1629992_1631252_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B	unknown	unknown	gnl\|CDD\|225617
CP024134.1\|AUK10837.1\|1658223_1658565_-\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
CP024134.1\|AUK10836.1\|1657373_1658150_+\|DUF2135-domain-containing-protein	unknown	unknown	gnl\|CDD\|227021
CP024134.1\|AUK10835.1\|1655719_1657369_+\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732

Protein	Function_ID	Function_description	E-value
CP024134.1\|AUK14168.1\|1637002_1638133_-\|ribonucleoside-diphosphate-reductase-1-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
CP024134.1\|AUK10827.1\|1636748_1637003_-\|ferredoxin	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
CP024134.1\|AUK10834.1\|1651114_1655719_+\|hypothetical-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
CP024134.1\|AUK10823.1\|1633142_1634501_+\|MFS-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
CP024134.1\|AUK10828.1\|1638366_1640652_-\|ribonucleoside-diphosphate-reductase-1-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
CP024134.1\|AUK10831.1\|1646096_1648724_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
CP024134.1\|AUK10830.1\|1645227_1645950_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.58484e-171
CP024134.1\|AUK10825.1\|1635623_1635830_-\|hypothetical-protein	gnl\|CDD\|182050	PRK09729, PRK09729, hypothetical protein; Provisional.	1.13329e-36
CP024134.1\|AUK10826.1\|1636044_1636695_+\|protein-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	2.86156e-158
CP024134.1\|AUK10820.1\|1628805_1629996_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
CP024134.1\|AUK10819.1\|1627713_1628613_-\|hypothetical-protein	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
CP024134.1\|AUK10829.1\|1641347_1645100_+\|AIDA-I-family-autotransporter-YfaL	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
CP024134.1\|AUK10822.1\|1631241_1632870_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
CP024134.1\|AUK10833.1\|1650557_1651181_+\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	3.71745e-140
CP024134.1\|AUK10832.1\|1648872_1650561_+\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
CP024134.1\|AUK10824.1\|1634505_1635582_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
CP024134.1\|AUK10821.1\|1629992_1631252_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
CP024134.1\|AUK10837.1\|1658223_1658565_-\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	7.39599e-64
CP024134.1\|AUK10836.1\|1657373_1658150_+\|DUF2135-domain-containing-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	4.17009e-153
CP024134.1\|AUK10835.1\|1655719_1657369_+\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	3.75964e-127

>CP024134.1|AUK14168.1|1637002_1638133_-|ribonucleoside-diphosphate-reductase-1-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>CP024134.1|AUK10827.1|1636748_1637003_-|ferredoxin
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>CP024134.1|AUK10826.1|1636044_1636695_+|protein-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>CP024134.1|AUK10825.1|1635623_1635830_-|hypothetical-protein
MNFIRQGLGIALQPELTLKSIAGELCSVPLEPTFYRQISLLAKEKPVEGSPLFLLQMCMEQLVAIGKI
>CP024134.1|AUK10824.1|1634505_1635582_+|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>CP024134.1|AUK10823.1|1633142_1634501_+|MFS-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>CP024134.1|AUK10822.1|1631241_1632870_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>CP024134.1|AUK10821.1|1629992_1631252_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLSTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVHQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>CP024134.1|AUK10820.1|1628805_1629996_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>CP024134.1|AUK10819.1|1627713_1628613_-|hypothetical-protein
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPNCH
>CP024134.1|AUK10828.1|1638366_1640652_-|ribonucleoside-diphosphate-reductase-1-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>CP024134.1|AUK10829.1|1641347_1645100_+|AIDA-I-family-autotransporter-YfaL
MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQYVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPEPDPTPDPDPTPDPDPTPDPAPVPVYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>CP024134.1|AUK10830.1|1645227_1645950_-|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>CP024134.1|AUK10831.1|1646096_1648724_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDLAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATAHGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>CP024134.1|AUK10832.1|1648872_1650561_+|DUF2138-domain-containing-protein
MSGEKKAEGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERAAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDTSFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPISQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKNRPAMVDVIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>CP024134.1|AUK10833.1|1650557_1651181_+|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVAHSEMLNVEQAGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSNQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>CP024134.1|AUK10834.1|1651114_1655719_+|hypothetical-protein
MDTQRFQSQFHWHLSFKFSGAIAACLSLSLVGTGLAKADDSLPSSNYAPPAGGTFFLLADSSFSSSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQTKPVEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVDVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVTLNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKMAQQSNIPVTVERQLYRLIPGEEEMSFILQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPVQQSVAAGSEWTGMQVK
>CP024134.1|AUK10835.1|1655719_1657369_+|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>CP024134.1|AUK10836.1|1657373_1658150_+|DUF2135-domain-containing-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>CP024134.1|AUK10837.1|1658223_1658565_-|acetyl-CoA-acetyltransferase
MGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN

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Crispr_ID: CP024134_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024134_4

2277901-2278024

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024134_4

>merge|CP024134|4|2277901-2278024|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>CP024134|4|4|2277901-2278024|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
CP024134.1\|AUK11416.1\|2272741_2273389_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182160
CP024134.1\|AUK11419.1\|2274906_2275719_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
CP024134.1\|AUK11418.1\|2274117_2274903_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
CP024134.1\|AUK11420.1\|2275730_2277335_-\|FAD/NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|182134
CP024134.1\|AUK11412.1\|2267354_2268767_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|181699
CP024134.1\|AUK11430.1\|2286920_2287010_+\|YnhF-family-membrane-protein	unknown	unknown	unknown
CP024134.1\|AUK11428.1\|2285596_2286622_-\|PurR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236739
CP024134.1\|AUK11426.1\|2283343_2284555_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
CP024134.1\|AUK11427.1\|2284667_2285600_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
CP024134.1\|AUK11424.1\|2281223_2281865_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
CP024134.1\|AUK11417.1\|2273452_2274121_+\|thiosulfate-reductase-electron-transport-protein-PhsB	unknown	unknown	gnl\|CDD\|274451
CP024134.1\|AUK11425.1\|2281904_2283053_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
CP024134.1\|AUK11422.1\|2278338_2279595_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|137602
CP024134.1\|AUK11414.1\|2269988_2270615_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182135
CP024134.1\|AUK11421.1\|2277460_2277766_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
CP024134.1\|AUK11431.1\|2287175_2288345_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
CP024134.1\|AUK11429.1\|2286609_2286834_-\|hypothetical-protein	unknown	unknown	unknown
CP024134.1\|AUK11423.1\|2279635_2281009_-\|multidrug-resistance-protein-MdtK	unknown	unknown	gnl\|CDD\|234981
CP024134.1\|AUK11413.1\|2269323_2269533_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
CP024134.1\|AUK11415.1\|2270635_2272738_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629

Protein	Function_ID	Function_description	E-value
CP024134.1\|AUK11416.1\|2272741_2273389_+\|hypothetical-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	2.81741e-122
CP024134.1\|AUK11419.1\|2274906_2275719_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	1.59319e-174
CP024134.1\|AUK11418.1\|2274117_2274903_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	1.01591e-161
CP024134.1\|AUK11420.1\|2275730_2277335_-\|FAD/NAD(P)-binding-domain-containing-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
CP024134.1\|AUK11412.1\|2267354_2268767_-\|pyruvate-kinase	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
CP024134.1\|AUK11428.1\|2285596_2286622_-\|PurR-family-transcriptional-regulator	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
CP024134.1\|AUK11426.1\|2283343_2284555_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
CP024134.1\|AUK11427.1\|2284667_2285600_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
CP024134.1\|AUK11424.1\|2281223_2281865_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
CP024134.1\|AUK11417.1\|2273452_2274121_+\|thiosulfate-reductase-electron-transport-protein-PhsB	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	7.32003e-76
CP024134.1\|AUK11425.1\|2281904_2283053_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
CP024134.1\|AUK11422.1\|2278338_2279595_+\|hypothetical-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
CP024134.1\|AUK11414.1\|2269988_2270615_+\|hypothetical-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
CP024134.1\|AUK11421.1\|2277460_2277766_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	4.48611e-64
CP024134.1\|AUK11431.1\|2287175_2288345_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
CP024134.1\|AUK11423.1\|2279635_2281009_-\|multidrug-resistance-protein-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
CP024134.1\|AUK11413.1\|2269323_2269533_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
CP024134.1\|AUK11415.1\|2270635_2272738_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0

>CP024134.1|AUK11421.1|2277460_2277766_-|monooxygenase
MATLLQLHFSFNGPFGDTMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>CP024134.1|AUK11420.1|2275730_2277335_-|FAD/NAD(P)-binding-domain-containing-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARKQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFHGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>CP024134.1|AUK11419.1|2274906_2275719_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALVYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>CP024134.1|AUK11418.1|2274117_2274903_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPLPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>CP024134.1|AUK11417.1|2273452_2274121_+|thiosulfate-reductase-electron-transport-protein-PhsB
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>CP024134.1|AUK11416.1|2272741_2273389_+|hypothetical-protein
MGEMNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>CP024134.1|AUK11415.1|2270635_2272738_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRVTTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAVDLAAHNLLPV
>CP024134.1|AUK11414.1|2269988_2270615_+|hypothetical-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>CP024134.1|AUK11413.1|2269323_2269533_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>CP024134.1|AUK11412.1|2267354_2268767_-|pyruvate-kinase
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>CP024134.1|AUK11422.1|2278338_2279595_+|hypothetical-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGTGWLKVATGGIVKCTQYGNNGTLSVSDGAIATDVVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIRVEITDASRQTLCNALKLQPDEDGIGATLQPA
>CP024134.1|AUK11423.1|2279635_2281009_-|multidrug-resistance-protein-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRASR
>CP024134.1|AUK11424.1|2281223_2281865_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>CP024134.1|AUK11425.1|2281904_2283053_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>CP024134.1|AUK11426.1|2283343_2284555_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>CP024134.1|AUK11427.1|2284667_2285600_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>CP024134.1|AUK11428.1|2285596_2286622_-|PurR-family-transcriptional-regulator
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>CP024134.1|AUK11429.1|2286609_2286834_-|hypothetical-protein
MISVFTTSPFRQDRPKFHAYTICVLAIDPFLTLRVVFPAYRNTFVVRKVCKGKRLPCDFAGAEVRVWSEMEWQQ
>CP024134.1|AUK11430.1|2286920_2287010_+|YnhF-family-membrane-protein
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>CP024134.1|AUK11431.1|2287175_2288345_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS

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Crispr_ID: CP024134_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024134_6

3547593-3547737

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024134_6

>merge|CP024134|6|3547593-3547737|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

>CP024134|6|6|3547593-3547737|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	TGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

Protein	Signature genes	Signature genes Name	Protein_function
CP024134.1\|AUK12676.1\|3546243_3547527_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|236709
CP024134.1\|AUK12685.1\|3557662_3558436_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
CP024134.1\|AUK12667.1\|3542284_3543037_+\|hypothetical-protein	unknown	unknown	unknown
CP024134.1\|AUK12670.1\|3543790_3544321_-\|hypothetical-protein	unknown	unknown	unknown
CP024134.1\|AUK12683.1\|3555912_3556971_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
CP024134.1\|AUK12678.1\|3550204_3551638_-\|anion-permease	unknown	unknown	gnl\|CDD\|279307
CP024134.1\|AUK12686.1\|3558601_3558751_-\|multidrug-efflux-pump-accessory-protein-AcrZ	unknown	unknown	gnl\|CDD\|371231
CP024134.1\|AUK12679.1\|3551713_3552766_-\|4-oxalomesaconate-tautomerase	unknown	unknown	gnl\|CDD\|380230
CP024134.1\|AUK12680.1\|3552949_3553903_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131
CP024134.1\|AUK12669.1\|3543358_3543580_+\|conjugal-transfer-protein-TraR	unknown	unknown	gnl\|CDD\|222775
CP024134.1\|AUK12677.1\|3547760_3550022_-\|hydratase	unknown	unknown	gnl\|CDD\|183125
CP024134.1\|AUK12668.1\|3543044_3543260_+\|cell-division-protein-ZapA	unknown	unknown	unknown
CP024134.1\|AUK12674.1\|3544842_3545061_+\|excisionase	unknown	unknown	gnl\|CDD\|116439
CP024134.1\|AUK12682.1\|3555093_3555912_+\|pyridoxal-phosphate-phosphatase-YbhA	unknown	unknown	gnl\|CDD\|182523
CP024134.1\|AUK12671.1\|3544211_3544463_-\|hypothetical-protein	unknown	unknown	unknown
CP024134.1\|AUK12684.1\|3556973_3557663_-\|molybdenum-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181841
CP024134.1\|AUK12675.1\|3545038_3546109_+\|integrase	unknown	unknown	gnl\|CDD\|271181
CP024134.1\|AUK12672.1\|3544517_3544703_-\|hypothetical-protein	unknown	unknown	unknown
CP024134.1\|AUK12681.1\|3553943_3554939_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
CP024134.1\|AUK12673.1\|3544635_3544803_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP024134.1\|AUK12676.1\|3546243_3547527_+\|acyl-CoA-thioesterase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
CP024134.1\|AUK12685.1\|3557662_3558436_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0
CP024134.1\|AUK12684.1\|3556973_3557663_-\|molybdenum-ABC-transporter-permease	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	2.41762e-146
CP024134.1\|AUK12683.1\|3555912_3556971_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
CP024134.1\|AUK12678.1\|3550204_3551638_-\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
CP024134.1\|AUK12686.1\|3558601_3558751_-\|multidrug-efflux-pump-accessory-protein-AcrZ	gnl\|CDD\|371231	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ. AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.	1.04381e-17
CP024134.1\|AUK12679.1\|3551713_3552766_-\|4-oxalomesaconate-tautomerase	gnl\|CDD\|380230	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase.	0
CP024134.1\|AUK12680.1\|3552949_3553903_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.09679e-82
CP024134.1\|AUK12669.1\|3543358_3543580_+\|conjugal-transfer-protein-TraR	gnl\|CDD\|222775	PHA00080, PHA00080, DksA-like zinc finger domain containing protein.	1.57279e-26
CP024134.1\|AUK12677.1\|3547760_3550022_-\|hydratase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
CP024134.1\|AUK12674.1\|3544842_3545061_+\|excisionase	gnl\|CDD\|116439	pfam07825, Exc, Excisionase-like protein. The phage-encoded excisionase protein (Xis) is involved in excisive recombination by regulating the assembly of the excisive intasome and by inhibiting viral integration. It adopts an unusual 'winged'-helix structure in which two alpha helices are packed against two extended strands. Also present in the structure is a two-stranded anti-parallel beta-sheet, whose strands are connected by a four-residue 'wing'. During interaction with DNA, helix alpha2 is thought to insert into the major groove, while the wing contacts the adjacent minor groove or phosphodiester backbone. The C-terminal region of Xis is involved in interaction with phage-encoded integrase (Int), and a putative C-terminal alpha helix may fold upon interaction with Int and/or DNA.	8.49552e-35
CP024134.1\|AUK12682.1\|3555093_3555912_+\|pyridoxal-phosphate-phosphatase-YbhA	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
CP024134.1\|AUK12675.1\|3545038_3546109_+\|integrase	gnl\|CDD\|271181	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase. Lambda-type integrases catalyze site-specific integration and excision of temperate bacteriophages and other mobile genetic elements to and from the bacterial host chromosome. They are tyrosine-based site-specific recombinase and belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The phage lambda integrase can bridge two different and well-separated DNA sequences called arm- and core-sites. The C-terminal domain binds, cleaves and re-ligates DNA strands at the core-sites, while the N-terminal domain is largely responsible for high-affinity binding to the arm-type sites.	1.09199e-61
CP024134.1\|AUK12681.1\|3553943_3554939_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0

>CP024134.1|AUK12676.1|3546243_3547527_+|acyl-CoA-thioesterase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>CP024134.1|AUK12675.1|3545038_3546109_+|integrase
MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNPVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHVDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK
>CP024134.1|AUK12674.1|3544842_3545061_+|excisionase
MYLTLQEWNARQRRPRSLETVRRWVRECRIFPPPVKDGREYLFHESAVKVDLNRPVTGSLLKRIRNGKKAKS
>CP024134.1|AUK12673.1|3544635_3544803_+|hypothetical-protein
MHFRVTGEWNGEPFNRVIEAENISDCYDHWMLWAQIAHADVTNIRIEELKEHQAA
>CP024134.1|AUK12672.1|3544517_3544703_-|hypothetical-protein
MFSASITLLNGSPFHSPVTRKCIYHLHKTKPAVASSDKRNPRQCEDAVHCCYTLFCSQRKR
>CP024134.1|AUK12671.1|3544211_3544463_-|hypothetical-protein
MSAERAKIHAKNLRNFVYYCAVSNELFSAQKMDGKFVRVRKNFMGAKHEKRFVSLFDLHDSFRADLYFPFLLVAGRYLQGHVS
>CP024134.1|AUK12670.1|3543790_3544321_-|hypothetical-protein
MKKDSYPYLICMTVSGLIFIFLFFWWRADIYRVTFLNQSISHYYILFSMGIAFLLSLFWVKKGIVKQRGWKSLSAYLKVYAGMCIFAGFFLIIPLTTLTYFLPGETSSYVAPYRYTSGSSKSCSGAEVDDPELHENIRICYPYGNYEYDNIIYVEKKINILGAVVTYAQTARDDTE
>CP024134.1|AUK12669.1|3543358_3543580_+|conjugal-transfer-protein-TraR
MADIIDSASEIEELQRNTAIKMRRLNHQAISATHCCECGDPIDERRRLVVQGCRTCASCQEDLELISKQRGSK
>CP024134.1|AUK12668.1|3543044_3543260_+|cell-division-protein-ZapA
MTIEHNNALRSIARQANSEIKKARQQFPDKNVDDICRSVLKKHRETVTLMGFTPTHLSLAIGMLNGVFKER
>CP024134.1|AUK12667.1|3542284_3543037_+|hypothetical-protein
MIHFHGGPITPDTCALKAWKGRHAFISFANPAQIDLASEVTQSFALDNGAFTFWTKNKAVDWNKYYRFVERWGNHPRFSFAVIPDVIGGTSEENDALIAAWPHGKFIGAPVWHMNEPDERFIRLCHEFPRVCIGSMGEYDAKRPRACRAKLRDLIRHVVDQYGYPITKIHGLRMLNKDIFTHVPLSSADSTNVARNIGIDKSWVGSPYAPASKETRTQVLVERIESFNSASSLNYNAERDVFTPQLAFEV
>CP024134.1|AUK12677.1|3547760_3550022_-|hydratase
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>CP024134.1|AUK12678.1|3550204_3551638_-|anion-permease
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>CP024134.1|AUK12679.1|3551713_3552766_-|4-oxalomesaconate-tautomerase
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
>CP024134.1|AUK12680.1|3552949_3553903_+|LysR-family-transcriptional-regulator
MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG
>CP024134.1|AUK12681.1|3553943_3554939_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>CP024134.1|AUK12682.1|3555093_3555912_+|pyridoxal-phosphate-phosphatase-YbhA
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>CP024134.1|AUK12683.1|3555912_3556971_-|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKDICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA
>CP024134.1|AUK12684.1|3556973_3557663_-|molybdenum-ABC-transporter-permease
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>CP024134.1|AUK12685.1|3557662_3558436_-|molybdate-ABC-transporter-substrate-binding-protein
MARKWLNLFAGAALSFAVAGNTLADEGKITVFAAASLTNAMQDIATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTASRQTLLGNSLVVVAPKASEQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTIK
>CP024134.1|AUK12686.1|3558601_3558751_-|multidrug-efflux-pump-accessory-protein-AcrZ
MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH

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Crispr_ID: CP024134_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024134_7

3790922-3791018

Orphan

Consensus_repeat	Method
TTGTAGGCCTGATAAGATGCGTCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024134_7

>merge|CP024134|7|3790922-3791018|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGCATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGGTTGTAGGCCTGATAAGACGCGTCAAGC

>CP024134|7|7|3790922-3791018|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGC	ATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGG
TTGTAGGCCTGATAAGACGCGTCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP024134.1\|AUK12885.1\|3786387_3787773_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
CP024134.1\|AUK12884.1\|3785830_3786352_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
CP024134.1\|AUK12897.1\|3799888_3800674_+\|(S)-ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|200251
CP024134.1\|AUK12881.1\|3783629_3784172_-\|type-1-fimbrial-protein-subunit-FimA	unknown	unknown	gnl\|CDD\|237920
CP024134.1\|AUK12898.1\|3800901_3802047_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|182152
CP024134.1\|AUK12890.1\|3791051_3791945_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
CP024134.1\|AUK12892.1\|3792767_3794027_-\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
CP024134.1\|AUK12891.1\|3791941_3792757_-\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
CP024134.1\|AUK12893.1\|3795602_3796297_+\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|281403
CP024134.1\|AUK12888.1\|3789283_3789793_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
CP024134.1\|AUK12882.1\|3784642_3785509_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl\|CDD\|236760
CP024134.1\|AUK12895.1\|3796794_3797844_+\|ureidoglycolate-dehydrogenase	unknown	unknown	gnl\|CDD\|184985
CP024134.1\|AUK12896.1\|3798651_3799878_+\|allantoate-amidohydrolase	unknown	unknown	gnl\|CDD\|274471
CP024134.1\|AUK12880.1\|3782717_3783410_-\|fimbrial-chaperone-SfmC	unknown	unknown	gnl\|CDD\|185117
CP024134.1\|AUK12899.1\|3802068_3803370_-\|uracil/xanthine-transporter	unknown	unknown	gnl\|CDD\|183124
CP024134.1\|AUK12894.1\|3796271_3796478_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180395
CP024134.1\|AUK12889.1\|3789789_3790857_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
CP024134.1\|AUK12887.1\|3788443_3789166_+\|UDP-2,3-diacylglucosamine-hydrolase	unknown	unknown	gnl\|CDD\|235420
CP024134.1\|AUK12886.1\|3787946_3788441_+\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|182734
CP024134.1\|AUK12883.1\|3785510_3785723_+\|ribosome-associated-protein	unknown	unknown	gnl\|CDD\|183166

Protein	Function_ID	Function_description	E-value
CP024134.1\|AUK12885.1\|3786387_3787773_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
CP024134.1\|AUK12884.1\|3785830_3786352_+\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	1.17059e-30
CP024134.1\|AUK12897.1\|3799888_3800674_+\|(S)-ureidoglycine-aminohydrolase	gnl\|CDD\|200251	TIGR03214, ura-cupin, putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).	3.35803e-151
CP024134.1\|AUK12881.1\|3783629_3784172_-\|type-1-fimbrial-protein-subunit-FimA	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92
CP024134.1\|AUK12898.1\|3800901_3802047_-\|glycerate-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0
CP024134.1\|AUK12890.1\|3791051_3791945_-\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
CP024134.1\|AUK12892.1\|3792767_3794027_-\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.8369e-131
CP024134.1\|AUK12891.1\|3791941_3792757_-\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	2.28312e-37
CP024134.1\|AUK12893.1\|3795602_3796297_+\|IS1-family-transposase	gnl\|CDD\|281403	pfam03400, DDE_Tnp_IS1, IS1 transposase. Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases.	7.88437e-84
CP024134.1\|AUK12888.1\|3789283_3789793_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
CP024134.1\|AUK12882.1\|3784642_3785509_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
CP024134.1\|AUK12895.1\|3796794_3797844_+\|ureidoglycolate-dehydrogenase	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0
CP024134.1\|AUK12896.1\|3798651_3799878_+\|allantoate-amidohydrolase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
CP024134.1\|AUK12880.1\|3782717_3783410_-\|fimbrial-chaperone-SfmC	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	4.4332e-149
CP024134.1\|AUK12899.1\|3802068_3803370_-\|uracil/xanthine-transporter	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
CP024134.1\|AUK12894.1\|3796271_3796478_-\|hypothetical-protein	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	9.17741e-38
CP024134.1\|AUK12889.1\|3789789_3790857_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	3.8532e-179
CP024134.1\|AUK12887.1\|3788443_3789166_+\|UDP-2,3-diacylglucosamine-hydrolase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	1.25513e-165
CP024134.1\|AUK12886.1\|3787946_3788441_+\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121
CP024134.1\|AUK12883.1\|3785510_3785723_+\|ribosome-associated-protein	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42

>CP024134.1|AUK12889.1|3789789_3790857_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRADETEQLPAECYGECIVEKGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>CP024134.1|AUK12888.1|3789283_3789793_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>CP024134.1|AUK12887.1|3788443_3789166_+|UDP-2,3-diacylglucosamine-hydrolase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>CP024134.1|AUK12886.1|3787946_3788441_+|peptidyl-prolyl-cis-trans-isomerase
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>CP024134.1|AUK12885.1|3786387_3787773_-|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>CP024134.1|AUK12884.1|3785830_3786352_+|metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFNFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTAYGHQVIISELMWVWLPGMLLMGMLWWRRR
>CP024134.1|AUK12883.1|3785510_3785723_+|ribosome-associated-protein
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>CP024134.1|AUK12882.1|3784642_3785509_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>CP024134.1|AUK12881.1|3783629_3784172_-|type-1-fimbrial-protein-subunit-FimA
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>CP024134.1|AUK12880.1|3782717_3783410_-|fimbrial-chaperone-SfmC
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN
>CP024134.1|AUK12890.1|3791051_3791945_-|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSGGKPAWIGALSRIEETLAGEAGTCISL
>CP024134.1|AUK12891.1|3791941_3792757_-|DUF2877-domain-containing-protein
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWMLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>CP024134.1|AUK12892.1|3792767_3794027_-|DUF1116-domain-containing-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>CP024134.1|AUK12893.1|3795602_3796297_+|IS1-family-transposase
MASVNIHCPRCQSAQVYRHGQNPKGRDRFRCRDCHRVFQLTYTYQARKPGMKELITEMAFNGAGVRDTARTLKIGINTVIRTFKKLAPKRITSSPVAHADVALICELDEQWSYVGSKARQHWLWYAYNTKTGGVLAYTFGPRTDQTCRELLALLTPFNIGMLTSDDWGSYGREVPKNKHLTGKIFTQRIERNNLTLRTRIKRLARKTICFSRSVEIHEKVIGAFIEKHMFY
>CP024134.1|AUK12894.1|3796271_3796478_-|hypothetical-protein
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDLVVHPISRTCVFR
>CP024134.1|AUK12895.1|3796794_3797844_+|ureidoglycolate-dehydrogenase
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQKGVAVVGISRMGHSGAISYFVQQAARAGLIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEVLTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGAPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHVVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ
>CP024134.1|AUK12896.1|3798651_3799878_+|allantoate-amidohydrolase
MTRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLSGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTLEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSIEKAKKMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAILRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKDLVATLTELCESEKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLAIMLYQLAWQK
>CP024134.1|AUK12897.1|3799888_3800674_+|(S)-ureidoglycine-aminohydrolase
MGYLNNVTGYRDDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNSWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>CP024134.1|AUK12898.1|3800901_3802047_-|glycerate-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDAHYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGETVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQVLVANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>CP024134.1|AUK12899.1|3802068_3803370_-|uracil/xanthine-transporter
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE

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Crispr_ID: CP024134_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024134_8

4296562-4296703

Orphan

Consensus_repeat	Method
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024134_8

>merge|CP024134|8|4296562-4296703|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCGGCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

>CP024134|8|8|4296562-4296703|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	TAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCG
GCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
CP024134.1\|AUK13321.1\|4290918_4292061_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
CP024134.1\|AUK13318.1\|4287174_4288116_-\|protein-FixB	unknown	unknown	gnl\|CDD\|235120
CP024134.1\|AUK13331.1\|4303220_4304135_-\|ribonucleoside-hydrolase-RihC	unknown	unknown	gnl\|CDD\|182713
CP024134.1\|AUK13327.1\|4297162_4297342_+\|hypothetical-protein	unknown	unknown	unknown
CP024134.1\|AUK13316.1\|4285553_4285841_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
CP024134.1\|AUK13332.1\|4304200_4305151_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
CP024134.1\|AUK13320.1\|4289373_4290888_+\|L-carnitine/gamma-butyrobetaine-antiporter	unknown	unknown	gnl\|CDD\|179568
CP024134.1\|AUK13325.1\|4295933_4296524_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
CP024134.1\|AUK13328.1\|4297389_4300611_-\|carbamoyl-phosphate-synthase-large-chain	unknown	unknown	gnl\|CDD\|235393
CP024134.1\|AUK13335.1\|4306220_4309037_-\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
CP024134.1\|AUK13330.1\|4302232_4303054_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
CP024134.1\|AUK13323.1\|4293480_4295034_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
CP024134.1\|AUK13333.1\|4305152_4305602_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|237908
CP024134.1\|AUK13329.1\|4300628_4301777_-\|carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
CP024134.1\|AUK13319.1\|4288130_4288901_-\|protein-FixA	unknown	unknown	gnl\|CDD\|179569
CP024134.1\|AUK13322.1\|4292189_4293407_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
CP024134.1\|AUK13317.1\|4285837_4287124_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
CP024134.1\|AUK13324.1\|4295142_4295928_+\|carnitinyl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|179599
CP024134.1\|AUK13334.1\|4305726_4306221_-\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|234739
CP024134.1\|AUK13326.1\|4296732_4297128_-\|transcriptional-activatory-protein-CaiF	unknown	unknown	gnl\|CDD\|183154

Protein	Function_ID	Function_description	E-value
CP024134.1\|AUK13321.1\|4290918_4292061_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
CP024134.1\|AUK13318.1\|4287174_4288116_-\|protein-FixB	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
CP024134.1\|AUK13331.1\|4303220_4304135_-\|ribonucleoside-hydrolase-RihC	gnl\|CDD\|182713	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional.	0
CP024134.1\|AUK13316.1\|4285553_4285841_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
CP024134.1\|AUK13332.1\|4304200_4305151_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
CP024134.1\|AUK13320.1\|4289373_4290888_+\|L-carnitine/gamma-butyrobetaine-antiporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
CP024134.1\|AUK13325.1\|4295933_4296524_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	6.23334e-142
CP024134.1\|AUK13328.1\|4297389_4300611_-\|carbamoyl-phosphate-synthase-large-chain	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
CP024134.1\|AUK13335.1\|4306220_4309037_-\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
CP024134.1\|AUK13330.1\|4302232_4303054_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	8.28292e-142
CP024134.1\|AUK13323.1\|4293480_4295034_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
CP024134.1\|AUK13333.1\|4305152_4305602_-\|peptidylprolyl-isomerase	gnl\|CDD\|237908	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	9.11961e-106
CP024134.1\|AUK13329.1\|4300628_4301777_-\|carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
CP024134.1\|AUK13319.1\|4288130_4288901_-\|protein-FixA	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	6.8619e-170
CP024134.1\|AUK13322.1\|4292189_4293407_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
CP024134.1\|AUK13317.1\|4285837_4287124_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
CP024134.1\|AUK13324.1\|4295142_4295928_+\|carnitinyl-CoA-dehydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	5.82869e-179
CP024134.1\|AUK13334.1\|4305726_4306221_-\|lipoprotein-signal-peptidase	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	1.42141e-75
CP024134.1\|AUK13326.1\|4296732_4297128_-\|transcriptional-activatory-protein-CaiF	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	1.42176e-74

>CP024134.1|AUK13325.1|4295933_4296524_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRYHASLHETQPLRQMEENRPRLQGTTDVTPKR
>CP024134.1|AUK13324.1|4295142_4295928_+|carnitinyl-CoA-dehydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>CP024134.1|AUK13323.1|4293480_4295034_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNCPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>CP024134.1|AUK13322.1|4292189_4293407_+|L-carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKARETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>CP024134.1|AUK13321.1|4290918_4292061_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>CP024134.1|AUK13320.1|4289373_4290888_+|L-carnitine/gamma-butyrobetaine-antiporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>CP024134.1|AUK13319.1|4288130_4288901_-|protein-FixA
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>CP024134.1|AUK13318.1|4287174_4288116_-|protein-FixB
MNTFSQVWVFSDTPSRLPELMNGAQALANQINAFVLNDADGAQAIQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>CP024134.1|AUK13317.1|4285837_4287124_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFAESAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>CP024134.1|AUK13316.1|4285553_4285841_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>CP024134.1|AUK13326.1|4296732_4297128_-|transcriptional-activatory-protein-CaiF
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>CP024134.1|AUK13327.1|4297162_4297342_+|hypothetical-protein
MTRFEAIKQGHIKIVDISIVCNFTVDKCELNPAYVIKNIDSPKDLLNGQKKTVLIREPY
>CP024134.1|AUK13328.1|4297389_4300611_-|carbamoyl-phosphate-synthase-large-chain
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>CP024134.1|AUK13329.1|4300628_4301777_-|carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>CP024134.1|AUK13330.1|4302232_4303054_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL
>CP024134.1|AUK13331.1|4303220_4304135_-|ribonucleoside-hydrolase-RihC
MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIPAFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPHIRRLVIMGGSAGRGNCTPNAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLATLPELNRTGKMLHALFSHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVQVALDLNVKGFQQWVAEVLALVP
>CP024134.1|AUK13332.1|4304200_4305151_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD
>CP024134.1|AUK13333.1|4305152_4305602_-|peptidylprolyl-isomerase
MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA
>CP024134.1|AUK13334.1|4305726_4306221_-|lipoprotein-signal-peptidase
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSRAKKQ
>CP024134.1|AUK13335.1|4306220_4309037_-|isoleucine--tRNA-ligase
MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKVAEHAEICGRCVSNVAGDGEKRKFA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP024134_2	2.7\|1060172\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060172-1060203	32	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	74762-74793	0	1.0
CP024134_5	5.1\|3236064\|40\|CP024134\|CRISPRCasFinder	3236064-3236103	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	0	1.0
CP024134_2	2.14\|1060599\|32\|CP024134\|CRISPRCasFinder,CRT	1060599-1060630	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246937-246968	1	0.969
CP024134_4	4.1\|2277944\|38\|CP024134\|CRISPRCasFinder	2277944-2277981	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
CP024134_1	1.2\|1033923\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033923-1033955	33	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3606	4	0.879
CP024134_1	1.2\|1033923\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033923-1033955	33	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3599	4	0.879
CP024134_1	1.2\|1033923\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033923-1033955	33	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21075	4	0.879
CP024134_2	2.9\|1060294\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060294-1060325	32	MF547662	Clostridioides phage LIBA6276, complete genome	37369-37400	4	0.875
CP024134_2	2.9\|1060294\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060294-1060325	32	MF547663	Clostridioides phage LIBA2945, complete genome	37369-37400	4	0.875
CP024134_2	2.7\|1060172\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060172-1060203	32	NC_014108	Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence	6021-6052	5	0.844
CP024134_2	2.7\|1060172\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060172-1060203	32	NZ_CP030922	Escherichia coli strain KL53 plasmid pKL53-S, complete sequence	5379-5410	5	0.844
CP024134_2	2.7\|1060172\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060172-1060203	32	NZ_CP038659	Citrobacter freundii strain 680 plasmid p680_1, complete sequence	372822-372853	5	0.844
CP024134_2	2.7\|1060172\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060172-1060203	32	MN699848	Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence	37054-37085	5	0.844
CP024134_2	2.9\|1060294\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060294-1060325	32	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	83504-83535	5	0.844
CP024134_1	1.2\|1033923\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033923-1033955	33	KY653119	Morganella phage IME1369_02, complete genome	18216-18248	6	0.818
CP024134_2	2.4\|1059989\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1059989-1060020	32	NZ_AP018520	Sphingobium sp. YG1 plasmid pYGP1, complete sequence	43472-43503	6	0.812
CP024134_2	2.10\|1060355\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060355-1060386	32	NZ_CP025114	Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence	241497-241528	6	0.812
CP024134_2	2.10\|1060355\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060355-1060386	32	NZ_CP044544	Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence	137039-137070	6	0.812
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24789-24826	6	0.842
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24902-24939	6	0.842
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4073-4110	6	0.842
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4072-4109	6	0.842
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4072-4109	6	0.842
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4072-4109	6	0.842
CP024134_2	2.14\|1060599\|32\|CP024134\|CRISPRCasFinder,CRT	1060599-1060630	32	MK455769	Aeromonas phage MJG, complete genome	10369-10400	7	0.781
CP024134_1	1.3\|1033984\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033984-1034016	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755172-755204	8	0.758
CP024134_2	2.3\|1059928\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1059928-1059959	32	NC_018454	Cronobacter phage phiES15, complete genome	8781-8812	8	0.75
CP024134_2	2.3\|1059928\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1059928-1059959	32	JQ780327	Cronobacter phage phiES15, complete sequence	8781-8812	8	0.75
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3331-3368	8	0.789
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3330-3367	8	0.789
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3330-3367	8	0.789
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3330-3367	8	0.789
CP024134_2	2.5\|1060050\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060050-1060081	32	NZ_CP009595	Bacillus cereus strain 3a plasmid pBFC_3, complete sequence	298003-298034	9	0.719
CP024134_2	2.5\|1060050\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060050-1060081	32	NZ_CP009606	Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence	164238-164269	9	0.719
CP024134_2	2.5\|1060050\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060050-1060081	32	NZ_CP053994	Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence	238009-238040	9	0.719
CP024134_2	2.5\|1060050\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060050-1060081	32	NZ_CP053992	Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence	221025-221056	9	0.719
CP024134_2	2.7\|1060172\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060172-1060203	32	NZ_CP045296	Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence	238917-238948	9	0.719
CP024134_2	2.9\|1060294\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060294-1060325	32	MN693584	Marine virus AFVG_25M163, complete genome	29591-29622	9	0.719
CP024134_2	2.9\|1060294\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060294-1060325	32	MN103543	Pseudomonas phage vB_PaeM_PS119XW, complete genome	258501-258532	9	0.719
CP024134_2	2.9\|1060294\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060294-1060325	32	MK599315	Pseudomonas phage PA1C, complete genome	257887-257918	9	0.719
CP024134_2	2.10\|1060355\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060355-1060386	32	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	1548232-1548263	9	0.719
CP024134_2	2.14\|1060599\|32\|CP024134\|CRISPRCasFinder,CRT	1060599-1060630	32	NC_047954	Pseudomonas phage Njord, complete genome	11435-11466	9	0.719
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14114-14151	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51843-51880	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229388-229425	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239882-239919	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230794-230831	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211764-211801	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40383-40420	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313601-313638	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386517-386554	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397090-397127	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404135-404172	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	114998-115035	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40307-40344	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	103-140	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31308-31345	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	8897-8934	9	0.763
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	17901-17938	9	0.763
CP024134_2	2.2\|1059867\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1059867-1059898	32	NZ_CP027239	Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence	55281-55312	10	0.688
CP024134_2	2.4\|1059989\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1059989-1060020	32	NZ_CP021914	Sagittula sp. P11 plasmid unnamed1, complete sequence	50199-50230	10	0.688
CP024134_2	2.7\|1060172\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060172-1060203	32	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	259269-259300	10	0.688
CP024134_2	2.14\|1060599\|32\|CP024134\|CRISPRCasFinder,CRT	1060599-1060630	32	NC_047894	Pseudomonas phage uligo, complete genome	11353-11384	10	0.688
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56040-56077	10	0.737
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP053046	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence	58275-58312	10	0.737
CP024134_8	8.1\|4296614\|38\|CP024134\|CRISPRCasFinder	4296614-4296651	38	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30215-30252	10	0.737
CP024134_1	1.1\|1033862\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033862-1033894	33	MN694016	Marine virus AFVG_250M811, complete genome	5413-5445	11	0.667
CP024134_1	1.1\|1033862\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033862-1033894	33	MN694190	Marine virus AFVG_250M608, complete genome	5350-5382	11	0.667
CP024134_1	1.1\|1033862\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033862-1033894	33	MN693920	Marine virus AFVG_250M810, complete genome	5422-5454	11	0.667
CP024134_1	1.1\|1033862\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033862-1033894	33	MN693800	Marine virus AFVG_250M813, complete genome	5404-5436	11	0.667
CP024134_1	1.1\|1033862\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033862-1033894	33	MN694554	Marine virus AFVG_250M812, complete genome	5416-5448	11	0.667
CP024134_1	1.1\|1033862\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033862-1033894	33	MN694404	Marine virus AFVG_250M623, complete genome	5369-5401	11	0.667
CP024134_1	1.1\|1033862\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033862-1033894	33	MN694355	Marine virus AFVG_250M627, complete genome	26039-26071	11	0.667
CP024134_1	1.2\|1033923\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033923-1033955	33	MF158039	Shigella phage Sf12, complete genome	4974-5006	11	0.667
CP024134_1	1.2\|1033923\|33\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1033923-1033955	33	MF158042	Shigella phage Sd1, complete genome	937-969	11	0.667
CP024134_2	2.6\|1060111\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060111-1060142	32	MT344105	Acinetobacter phage fLi-Aba03, complete genome	32699-32730	11	0.656
CP024134_2	2.6\|1060111\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060111-1060142	32	MT344104	Acinetobacter phage fLi-Aba02, complete genome	32861-32892	11	0.656
CP024134_2	2.6\|1060111\|32\|CP024134\|PILER-CR,CRISPRCasFinder,CRT	1060111-1060142	32	MT344103	Acinetobacter phage fEg-Aba01, complete genome	31614-31645	11	0.656

1. spacer 2.7|1060172|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 0, identity: 1.0

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggggaaaacgaacaatctgttt	Protospacer
********************************

2. spacer 5.1|3236064|40|CP024134|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

3. spacer 2.14|1060599|32|CP024134|CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 1, identity: 0.969

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
***********************.********

4. spacer 4.1|2277944|38|CP024134|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

5. spacer 1.2|1033923|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

6. spacer 1.2|1033923|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

7. spacer 1.2|1033923|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

8. spacer 2.9|1060294|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 4, identity: 0.875

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cttataaaa	Protospacer
*** ******************* .***** *

9. spacer 2.9|1060294|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 4, identity: 0.875

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cttataaaa	Protospacer
*** ******************* .***** *

10. spacer 2.7|1060172|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NC_014108 (Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

11. spacer 2.7|1060172|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030922 (Escherichia coli strain KL53 plasmid pKL53-S, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

12. spacer 2.7|1060172|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038659 (Citrobacter freundii strain 680 plasmid p680_1, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

13. spacer 2.7|1060172|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MN699848 (Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

14. spacer 2.9|1060294|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cctataaaa	Protospacer
*** ******************* ..**** *

15. spacer 1.2|1033923|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
aggttgtgcggcgttaacgctgaccagcatttc	Protospacer
 *  * ******.******** ***********

16. spacer 2.4|1059989|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 6, identity: 0.812

ggcgagtccgtcagcggtgcgccgctg-caaca	CRISPR spacer
gtcgagtaagtcagcggtgcgccgcgatcaac-	Protospacer
* *****  **************** . ****

17. spacer 2.10|1060355|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025114 (Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

atcggacg-atggcgatcgcaatcgcgcgggaa	CRISPR spacer
-ttagacgcatggcgattgcaatcgcgtgggat	Protospacer
 *..**** ********.*********.****

18. spacer 2.10|1060355|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044544 (Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence) position: , mismatch: 6, identity: 0.812

atcggacg-atggcgatcgcaatcgcgcgggaa	CRISPR spacer
-ttagacgcatggcgattgcaatcgcgtgggat	Protospacer
 *..**** ********.*********.****

19. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

20. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

21. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

22. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

23. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

24. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

25. spacer 2.14|1060599|32|CP024134|CRISPRCasFinder,CRT matches to MK455769 (Aeromonas phage MJG, complete genome) position: , mismatch: 7, identity: 0.781

gacgcactggatgcgatgatggatatcacttg-	CRISPR spacer
gacgcactgtatgcaatgatgga-atcggaggc	Protospacer
********* ****.******** ***.   *

26. spacer 1.3|1033984|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

gacgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
tccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
  *******.**************** *.. *.

27. spacer 2.3|1059928|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NC_018454 (Cronobacter phage phiES15, complete genome) position: , mismatch: 8, identity: 0.75

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

28. spacer 2.3|1059928|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to JQ780327 (Cronobacter phage phiES15, complete sequence) position: , mismatch: 8, identity: 0.75

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

29. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

30. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

31. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

32. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

33. spacer 2.5|1060050|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009595 (Bacillus cereus strain 3a plasmid pBFC_3, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

34. spacer 2.5|1060050|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009606 (Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

35. spacer 2.5|1060050|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053994 (Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

36. spacer 2.5|1060050|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053992 (Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

37. spacer 2.7|1060172|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045296 (Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tctgctgcatgggggaaacgatcaatctgttg	Protospacer
**    ..******.****** *********

38. spacer 2.9|1060294|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MN693584 (Marine virus AFVG_25M163, complete genome) position: , mismatch: 9, identity: 0.719

tacagtttccataaattcacctcgtttatata	CRISPR spacer
ggggatatctataaactcacctcgtttatatt	Protospacer
 . ..* **.*****.***************

39. spacer 2.9|1060294|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MN103543 (Pseudomonas phage vB_PaeM_PS119XW, complete genome) position: , mismatch: 9, identity: 0.719

tacagtttccataaattcacctcgtttatata	CRISPR spacer
cgcttcttccatacattcacctcggttatgga	Protospacer
..*  .******* ********** ****. *

40. spacer 2.9|1060294|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MK599315 (Pseudomonas phage PA1C, complete genome) position: , mismatch: 9, identity: 0.719

tacagtttccataaattcacctcgtttatata	CRISPR spacer
cgcttcttccatacattcacctcggttatgga	Protospacer
..*  .******* ********** ****. *

41. spacer 2.10|1060355|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 9, identity: 0.719

atcggacgatggcgatcgcaatcgcgcgggaa	CRISPR spacer
aaaagacgatggcgatcgcaatcgtgcctttc	Protospacer
*  .********************.**

42. spacer 2.14|1060599|32|CP024134|CRISPRCasFinder,CRT matches to NC_047954 (Pseudomonas phage Njord, complete genome) position: , mismatch: 9, identity: 0.719

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggccgaggc	Protospacer
******** ************** ..*.

43. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tgattgccggatgcggcgtaaacgccttatccggccta	Protospacer
*...**.**********.**************..**..

44. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ctggtgccggatgcggcgtaaacgccttatccggccta	Protospacer
. * **.**********.**************..**..

45. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

46. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

47. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

48. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

49. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

50. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aaaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
 *. **.**********.**************..**..

51. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caagtgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

52. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caattgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*..**.**********.**************..**..

53. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttcttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

54. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
. .***.**********.**************. **..

55. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttatgccggatgcggcgtaaacgccttatccggccta	Protospacer
*   **.**********.**************..**..

56. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
atgttgccggatgcggcgtaaacgccttatccggccta	Protospacer
  *.**.**********.**************..**..

57. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

58. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cggttgccggatgcggcgtaaacgccttatccggccta	Protospacer
..*.**.**********.**************..**..

59. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
gacttgccggatgcggcgtaaacgccttatccggccac	Protospacer
 * .**.**********.**************..**

60. spacer 2.2|1059867|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027239 (Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcacggaattgttatgctgttcccctgaccg	CRISPR spacer
tcttcggaattgccatgctgttccccttccat	Protospacer
  . ********..*************  *

61. spacer 2.4|1059989|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcgagtccgtcagcggtgcgccgctgcaaca	CRISPR spacer
ttggagtccgacatcggtgcgccgcttttcga	Protospacer
   ******* ** ************ .   *

62. spacer 2.7|1060172|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
agctgaatatggggaaaatgcacaatatcccc	Protospacer
   ***************.* ***** * ...

63. spacer 2.14|1060599|32|CP024134|CRISPRCasFinder,CRT matches to NC_047894 (Pseudomonas phage uligo, complete genome) position: , mismatch: 10, identity: 0.688

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggcagaagc	Protospacer
******** ************** .. .

64. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccattgccggatgcggcgtaaacgccttatccggccta	Protospacer
. ..**.**********.**************..**..

65. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aggttgccggatgcggcgtaaacgccttatccggcata	Protospacer
 .*.**.**********.**************..* ..

66. spacer 8.1|4296614|38|CP024134|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatctggccta	Protospacer
.*. **.**********.*************...**..

67. spacer 1.1|1033862|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MN694016 (Marine virus AFVG_250M811, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

68. spacer 1.1|1033862|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MN694190 (Marine virus AFVG_250M608, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatacct	Protospacer
 .  .*********.***********.**.

69. spacer 1.1|1033862|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MN693920 (Marine virus AFVG_250M810, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

70. spacer 1.1|1033862|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MN693800 (Marine virus AFVG_250M813, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

71. spacer 1.1|1033862|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MN694554 (Marine virus AFVG_250M812, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

72. spacer 1.1|1033862|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MN694404 (Marine virus AFVG_250M623, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatacct	Protospacer
 .  .*********.***********.**.

73. spacer 1.1|1033862|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MN694355 (Marine virus AFVG_250M627, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

74. spacer 1.2|1033923|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   ..

75. spacer 1.2|1033923|33|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   ..

76. spacer 2.6|1060111|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MT344105 (Acinetobacter phage fLi-Aba03, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

77. spacer 2.6|1060111|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MT344104 (Acinetobacter phage fLi-Aba02, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

78. spacer 2.6|1060111|32|CP024134|PILER-CR,CRISPRCasFinder,CRT matches to MT344103 (Acinetobacter phage fEg-Aba01, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

262324 : 268103

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK09551.1\|262324_263005_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.7e-31	36.0
AUK09552.1\|262997_264479_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	1.8e-27	30.1
AUK09553.1\|264723_265155_+	silver-binding protein SilE	NA	NA	NA	NA
AUK14119.1\|265412_265793_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
AUK09554.1\|265789_266137_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
AUK09555.1\|266186_267725_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	6.0e-297	99.2
AUK09556.1\|267785_268103_+	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	7.4e-16	61.4

DBSCAN-SWA_2

1068023 : 1081983

Escherichia_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK10304.1\|1068023_1068785_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
AUK10305.1\|1068778_1069405_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
AUK10306.1\|1069544_1070684_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
AUK10307.1\|1070746_1071739_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
AUK10308.1\|1071832_1073197_-	GntP family transporter	NA	NA	NA	NA
AUK10309.1\|1073285_1074062_-	hypothetical protein	NA	NA	NA	NA
AUK10310.1\|1074066_1074705_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
AUK10311.1\|1074701_1075964_-	hypothetical protein	A0A077SLJ7	Escherichia_phage	6.3e-135	61.2
AUK10312.1\|1075960_1076869_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
AUK10313.1\|1077064_1077832_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
AUK10314.1\|1078659_1079316_-	serine/threonine protein phosphatase	K7P7V3	Enterobacteria_phage	5.6e-50	45.3
AUK10315.1\|1079421_1081983_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	2.3e-30	20.6

DBSCAN-SWA_3

1464071 : 1558606

117

Enterobacteria_phage(59.52%)

coat,holin,tRNA,transposase,portal,integrase,terminase,lysis,head,tail

attL 1537392:1537411|attR 1557473:1557492

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK10643.1\|1464071_1465233_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.1e-51	40.6
AUK10644.1\|1466201_1467137_+	DNA-binding transcriptional regulator DsdC	NA	NA	NA	NA
AUK10645.1\|1467320_1467521_-	transcriptional regulator	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
AUK10646.1\|1467652_1467832_-	Eag protein	K7PL40	Enterobacteria_phage	2.5e-29	100.0
AUK10647.1\|1467928_1468696_-	hypothetical protein	A0A222YWE8	Escherichia_phage	1.6e-56	91.7
AUK10648.1\|1468706_1469462_-	hypothetical protein	A0A1R3Y5Q7	Salmonella_virus	6.5e-143	93.2
AUK10649.1\|1469463_1469871_-	hypothetical protein	A0A125RPT9	Escherichia_phage	8.7e-70	98.5
AUK10650.1\|1469872_1470172_-	hypothetical protein	A5VWB2	Enterobacteria_phage	1.3e-57	99.0
AUK10651.1\|1470168_1470336_-	DUF2737 domain-containing protein	Q716F2	Shigella_phage	3.6e-22	96.4
AUK10652.1\|1470352_1470667_-	hypothetical protein	K7P7J8	Enterobacteria_phage	1.3e-49	98.1
AUK10653.1\|1470678_1471161_-	hypothetical protein	K7P6T5	Enterobacteria_phage	3.5e-78	96.9
AUK10654.1\|1471144_1472056_-	DNA recombinase	K7PKG9	Enterobacteria_phage	3.7e-169	99.3
AUK10655.1\|1472052_1472361_-	hypothetical protein	K7PJM4	Enterobacteria_phage	4.8e-52	97.1
AUK10656.1\|1472445_1472721_-	hypothetical protein	K7PGS9	Enterobacteria_phage	4.2e-44	96.7
AUK10657.1\|1472810_1473281_-	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	3.7e-88	100.0
AUK10658.1\|1473359_1473548_-	hypothetical protein	K7PMF8	Enterobacteria_phage	3.3e-16	88.6
AUK10659.1\|1473606_1473879_-	antitermination protein N	A0A0N7C217	Escherichia_phage	5.7e-41	100.0
AUK10660.1\|1474225_1474921_-	phage repressor	A0A0N7BTS4	Escherichia_phage	8.3e-129	96.1
AUK10661.1\|1474996_1475212_+	XRE family transcriptional regulator	A0A0N7C2U7	Escherichia_phage	2.2e-35	100.0
AUK10662.1\|1475352_1475649_+	hypothetical protein	Q9MCQ0	Enterobacteria_phage	1.8e-48	100.0
AUK10663.1\|1475681_1475828_+	hypothetical protein	Q687G5	Enterobacteria_phage	1.1e-19	100.0
AUK10664.1\|1475820_1476720_+	DNA replication protein	A0A0N7C1Z7	Escherichia_phage	1.0e-163	99.3
AUK10665.1\|1476694_1478146_+	helicase DnaB	Q08J37	Stx2-converting_phage	7.7e-278	100.0
AUK10666.1\|1478204_1478663_+	recombination protein NinB	M1FPM8	Enterobacteria_phage	1.6e-80	100.0
AUK10667.1\|1478659_1479187_+	phage N-6-adenine-methyltransferase	K7PJZ4	Enterobacterial_phage	1.8e-99	98.9
AUK10668.1\|1479183_1479360_+	NinE family protein	A5VW90	Enterobacteria_phage	4.6e-28	100.0
AUK10669.1\|1479362_1479722_+	DUF2591 domain-containing protein	K7PH48	Enterobacterial_phage	2.6e-41	74.2
AUK10670.1\|1479714_1479891_+	protein ninF	G9L691	Escherichia_phage	5.7e-26	100.0
AUK10671.1\|1479883_1480153_+	hypothetical protein	K7PHK7	Enterobacteria_phage	9.3e-44	98.9
AUK10672.1\|1480152_1480443_+	DUF1364 domain-containing protein	K7PKV0	Enterobacteria_phage	3.4e-52	100.0
AUK10673.1\|1480439_1480802_+	hypothetical protein	K7P6I9	Enterobacteria_phage	9.2e-63	100.0
AUK10674.1\|1480798_1480987_+	protein ninH	A5VW84	Enterobacteria_phage	5.5e-27	100.0
AUK10675.1\|1480983_1481502_+	antiterminator	A0A192Y911	Salmonella_phage	5.9e-95	98.8
AUK10676.1\|1481963_1482287_+\|holin	phage holin, lambda family	G5DA93	Enterobacteria_phage	1.3e-52	100.0
AUK10677.1\|1482270_1482747_+	lysozyme	A5VW81	Enterobacteria_phage	7.5e-89	100.0
AUK10678.1\|1482743_1483181_+\|lysis	lysis protein	Q716B4	Shigella_phage	5.5e-70	97.9
AUK10679.1\|1483168_1483321_+	hypothetical protein	K7PHR3	Enterobacteria_phage	8.1e-21	96.0
AUK10680.1\|1483524_1484043_+	Rha family transcriptional regulator	A0A2D1GLJ3	Escherichia_phage	3.2e-93	100.0
AUK10681.1\|1484395_1484638_+	hypothetical protein	A0A0M4R322	Salmonella_phage	1.7e-36	98.8
AUK14161.1\|1484673_1485162_+	DNA-packaging protein	G8EYI7	Enterobacteria_phage	1.4e-90	100.0
AUK10682.1\|1485139_1486636_+\|terminase	terminase	A0A2D1GLW6	Escherichia_phage	1.8e-282	93.6
AUK10683.1\|1486635_1488837_+\|portal	portal protein	A5VW74	Enterobacteria_phage	0.0e+00	96.7
AUK10684.1\|1488927_1489821_+	scaffolding protein	A0A088CPT0	Enterobacteria_phage	1.7e-129	98.7
AUK10685.1\|1489839_1491093_+\|coat	coat protein	A5VW72	Enterobacteria_phage	6.5e-233	98.3
AUK10686.1\|1491134_1491323_+	hypothetical protein	A0A088CPR7	Enterobacteria_phage	2.9e-28	100.0
AUK10687.1\|1491303_1491765_+\|head	head DNA stabilization protein	A5VW70	Enterobacteria_phage	7.1e-84	100.0
AUK10688.1\|1491774_1493193_+	hypothetical protein	Q716G7	Shigella_phage	1.5e-273	98.7
AUK10689.1\|1493192_1493894_+\|tail	phage tail protein	G5DA78	Enterobacteria_phage	7.4e-117	97.9
AUK10690.1\|1493893_1494349_+	hypothetical protein	A0A2D1GLX4	Escherichia_phage	1.8e-87	100.0
AUK10691.1\|1494351_1495044_+	DNA transfer protein	G5DA80	Enterobacteria_phage	9.2e-112	100.0
AUK10692.1\|1495053_1496394_+	DNA injection protein	Q9AYZ0	Salmonella_phage	4.0e-172	74.4
AUK10693.1\|1496393_1498562_+	DNA transfer protein	Q9AYY9	Salmonella_phage	0.0e+00	93.2
AUK14162.1\|1498562_1498892_-	hypothetical protein	Q9AYY8	Salmonella_phage	1.7e-52	99.1
AUK10694.1\|1499048_1500035_+	hypothetical protein	A9YX09	Burkholderia_phage	2.7e-72	47.6
AUK10695.1\|1500050_1500302_-	Arc family DNA-binding protein	G0ZNE9	Cronobacter_phage	7.6e-08	50.0
AUK10696.1\|1500416_1500569_+	Arc family DNA-binding protein	NA	NA	NA	NA
AUK10697.1\|1500565_1500748_+	hypothetical protein	NA	NA	NA	NA
AUK10698.1\|1500810_1501713_+	phage antirepressor Ant	Q0H8C7	Salmonella_phage	2.2e-169	97.7
AUK10699.1\|1503863_1505759_-	acyltransferase	A0A193GZ69	Enterobacter_phage	4.8e-78	48.3
AUK10700.1\|1505962_1506940_+	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	7.0e-57	40.8
AUK10701.1\|1507066_1507456_+	DNA polymerase V	K7P6F7	Enterobacteria_phage	7.8e-60	86.7
AUK10702.1\|1507462_1508620_-\|integrase	integrase	A5VW56	Enterobacteria_phage	4.1e-221	99.5
AUK10703.1\|1508931_1509864_-	hypothetical protein	E7DYY8	Enterobacteria_phage	2.3e-166	99.4
AUK10704.1\|1509961_1510132_+	hypothetical protein	NA	NA	NA	NA
AUK10705.1\|1510157_1510913_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
AUK10706.1\|1512519_1513860_-	long-chain fatty acid transporter	NA	NA	NA	NA
AUK10707.1\|1513895_1514147_+	hypothetical protein	NA	NA	NA	NA
AUK10708.1\|1514231_1514516_+	hypothetical protein	NA	NA	NA	NA
AUK10709.1\|1514696_1516007_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
AUK10710.1\|1516006_1518151_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
AUK10711.1\|1518353_1518839_+	phosphohistidine phosphatase	NA	NA	NA	NA
AUK10712.1\|1519522_1520086_+	type 1 fimbrial protein	NA	NA	NA	NA
AUK10713.1\|1522831_1523584_+	fimbrial protein	NA	NA	NA	NA
AUK10714.1\|1523600_1524107_+	hypothetical protein	NA	NA	NA	NA
AUK10715.1\|1524103_1524583_+	fimbrial protein	NA	NA	NA	NA
AUK10716.1\|1524579_1525131_+	fimbrial protein	NA	NA	NA	NA
AUK10717.1\|1525132_1525957_+	DUF2544 domain-containing protein	NA	NA	NA	NA
AUK10718.1\|1526082_1526634_-	endonuclease SmrB	NA	NA	NA	NA
AUK10719.1\|1526799_1527732_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AUK10720.1\|1527766_1528852_+	chorismate synthase	A0A291AU41	Pandoravirus	9.1e-90	48.4
AUK10721.1\|1528855_1529680_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
AUK10722.1\|1529679_1530489_+	hypothetical protein	NA	NA	NA	NA
AUK10723.1\|1530488_1531037_+	elongation factor P hydroxylase	NA	NA	NA	NA
AUK10724.1\|1531070_1531349_+	hypothetical protein	NA	NA	NA	NA
AUK10725.1\|1531469_1533476_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
AUK10726.1\|1533634_1534855_+	3-oxoacyl-ACP synthase I	NA	NA	NA	NA
AUK14163.1\|1534956_1535178_-	hypothetical protein	NA	NA	NA	NA
AUK10727.1\|1535119_1536298_+	MFS transporter	NA	NA	NA	NA
AUK10728.1\|1536294_1537290_-	flagella biosynthesis regulator	NA	NA	NA	NA
1537392:1537411	attL	NA	NA	NA	NA
AUK10729.1\|1537557_1538451_-	type VI secretion protein	NA	NA	NA	NA
AUK10730.1\|1538455_1538788_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
AUK10731.1\|1539049_1539190_-	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	7.0e-19	100.0
AUK10732.1\|1539380_1539641_-	hypothetical protein	NA	NA	NA	NA
AUK10733.1\|1539832_1540855_+	hypothetical protein	NA	NA	NA	NA
AUK10734.1\|1540975_1542085_-	late control protein	A0A0A7NQ97	Enterobacteria_phage	6.3e-195	94.6
AUK10735.1\|1542242_1543427_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	4.7e-225	99.2
AUK10736.1\|1543426_1543939_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	3.2e-93	100.0
AUK10737.1\|1543993_1544359_+\|tail	phage tail protein	A0A0A7NPZ0	Enterobacteria_phage	1.9e-55	96.7
AUK10738.1\|1544286_1544523_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	3.9e-22	98.0
AUK10739.1\|1544509_1547317_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	94.9
AUK10740.1\|1547323_1547818_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	2.1e-86	99.4
AUK10741.1\|1547844_1548444_-	DNA invertase	A0A0A7NPV4	Enterobacteria_phage	2.6e-86	86.3
AUK10742.1\|1548515_1548983_+\|tail	phage tail protein	Q9MCR6	Enterobacteria_phage	1.7e-48	64.8
AUK10743.1\|1549153_1549858_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUK10744.1\|1552158_1552524_-	hypothetical protein	A0A0A7NRY1	Enterobacteria_phage	2.1e-59	95.0
AUK10745.1\|1552596_1552827_-	derepression protein	A0A0A7NV48	Enterobacteria_phage	2.6e-31	96.1
AUK10746.1\|1553149_1553449_-	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	1.4e-40	87.9
AUK10747.1\|1553445_1553712_-	MarR family transcriptional regulator	A0A0A7NV47	Enterobacteria_phage	8.9e-31	76.1
AUK10748.1\|1553708_1553912_-	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	2.5e-25	83.6
AUK10749.1\|1554108_1554351_-	DUF4754 domain-containing protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
AUK10750.1\|1554362_1554650_-	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	6.0e-33	76.8
AUK10751.1\|1554660_1555002_-	DUF4761 domain-containing protein	A0A0A7NV42	Enterobacteria_phage	1.1e-54	91.4
AUK10752.1\|1555254_1555461_-	hypothetical protein	NA	NA	NA	NA
AUK10753.1\|1555467_1555755_-	hypothetical protein	A0A0M4RCW1	Salmonella_phage	4.3e-23	52.6
AUK14164.1\|1555868_1556189_+	XRE family transcriptional regulator	Q1JS37	Enterobacteria_phage	1.4e-14	43.2
AUK10754.1\|1556285_1557290_+\|integrase	integrase	A0A0M4RTQ0	Salmonella_phage	9.9e-99	55.4
AUK10755.1\|1557448_1558606_+	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	6.0e-23	28.8
1557473:1557492	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1767950 : 1804803

Enterobacteria_phage(34.69%)

integrase,holin,lysis,transposase

attL 1770425:1770444|attR 1798968:1798987

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK10938.1\|1767950_1768877_+	ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	30.8
AUK10939.1\|1768881_1769613_+	osmoprotectant uptake system permease	NA	NA	NA	NA
AUK10940.1\|1769593_1769701_-	hypothetical protein	NA	NA	NA	NA
AUK10941.1\|1769760_1770447_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	3.8e-102	99.5
1770425:1770444	attL	NA	NA	NA	NA
AUK10942.1\|1770482_1771769_-\|integrase	site-specific integrase	A0A0N7KZF5	Stx2-converting_phage	2.9e-252	99.8
AUK10943.1\|1771802_1772057_-	excisionase	Q859D3	Escherichia_coli_phage	3.0e-44	100.0
AUK10944.1\|1772075_1772210_-	hypothetical protein	H6WZF8	Escherichia_phage	2.2e-22	100.0
AUK10945.1\|1772213_1772456_-	DUF4222 domain-containing protein	H6WZF9	Escherichia_phage	1.2e-37	100.0
AUK10946.1\|1772543_1773047_-	DUF551 domain-containing protein	A0A088CE95	Shigella_phage	1.0e-56	43.0
AUK10947.1\|1773048_1773735_-	hypothetical protein	H6WZG2	Escherichia_phage	1.9e-117	85.2
AUK10948.1\|1773731_1773953_-	conjugal transfer protein TraR	A0A1I9LJM6	Stx_converting_phage	2.9e-35	100.0
AUK10949.1\|1774051_1774333_-	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
AUK10950.1\|1774343_1774535_-	hypothetical protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
AUK14171.1\|1774507_1774690_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	4.3e-29	100.0
AUK10951.1\|1774686_1775367_-	exonuclease	A0A0N6WET1	Escherichia_phage	4.6e-132	99.1
AUK10952.1\|1775363_1776149_-	phage recombination protein Bet	A0A0N7KZJ3	Stx2-converting_phage	3.1e-148	99.6
AUK10953.1\|1776154_1776451_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
AUK10954.1\|1776419_1776572_-	host-nuclease inhibitor protein Gam	Q08J51	Stx2-converting_phage	4.7e-21	98.0
AUK10955.1\|1776526_1776796_-	host cell division inhibitory peptide Kil	G3CFI2	Escherichia_phage	3.3e-41	97.8
AUK10956.1\|1776875_1777244_-	DUF2528 domain-containing protein	A0A1U9AJB3	Stx1_converting_phage	2.6e-65	99.2
AUK10957.1\|1777424_1778048_-	hypothetical protein	A0A2D1GLY1	Escherichia_phage	9.5e-108	97.1
AUK10958.1\|1778109_1778493_-	antitermination protein	A0A0P0ZBT9	Stx2-converting_phage	2.3e-64	100.0
AUK10959.1\|1779000_1779621_-	hypothetical protein	A4KWT4	Enterobacteria_phage	6.2e-51	99.5
AUK10960.1\|1779617_1780052_-	hypothetical protein	A4KWT5	Enterobacteria_phage	1.2e-77	100.0
AUK10961.1\|1780122_1780464_-	DUF3024 domain-containing protein	G9L675	Escherichia_phage	2.5e-62	99.1
AUK10962.1\|1780524_1781229_-	XRE family transcriptional regulator	A0A0P0ZE37	Stx2-converting_phage	1.1e-133	100.0
AUK10963.1\|1781342_1781576_+	transcriptional regulator	A0A0P0ZDD7	Stx2-converting_phage	8.0e-36	100.0
AUK10964.1\|1781714_1782011_+	hypothetical protein	C1JJ56	Enterobacteria_phage	8.9e-48	100.0
AUK10965.1\|1782911_1783613_+	Replication protein P	C1JJ58	Enterobacteria_phage	3.4e-130	100.0
AUK10966.1\|1783609_1783900_+	protein ren	A0A0P0ZCJ0	Stx2-converting_phage	9.6e-47	100.0
AUK10967.1\|1783970_1784249_+	hypothetical protein	Q9EYB9	Enterobacteria_phage	4.4e-49	100.0
AUK10968.1\|1784381_1784597_+	hypothetical protein	A0A0N7KZ98	Stx2-converting_phage	7.7e-33	100.0
AUK10969.1\|1784607_1784844_+	restriction alleviation protein, Lar family	Q8HA09	Enterobacteria_phage	1.2e-39	100.0
AUK10970.1\|1784800_1785247_+	recombination protein NinB	A0A0N7C2V1	Escherichia_phage	2.1e-80	99.3
AUK10971.1\|1785243_1785771_+	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	2.8e-100	99.4
AUK10972.1\|1785767_1785950_+	NinE family protein	Q4A1A6	Enterobacteria_phage	4.3e-29	100.0
AUK10973.1\|1786453_1788226_-	hypothetical protein	A0A1U9AJG3	Stx1_converting_phage	0.0e+00	99.3
AUK10974.1\|1788789_1789356_+	endonuclease	A0A1U9AJK5	Stx1_converting_phage	6.6e-108	99.5
AUK10975.1\|1789330_1789933_+	protein NinG	A0A1U9AJF8	Stx1_converting_phage	3.9e-90	94.6
AUK10976.1\|1789929_1790601_+	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	9.2e-133	99.6
AUK10977.1\|1790591_1791080_+	antiterminator	Q5TJL7	Enterobacteria_phage	7.0e-90	100.0
AUK14172.1\|1792072_1792186_+	DUF3927 domain-containing protein	NA	NA	NA	NA
AUK10978.1\|1792337_1792466_+	hypothetical protein	NA	NA	NA	NA
AUK10979.1\|1792514_1794365_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	98.4
AUK10980.1\|1794647_1794872_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	4.0e-32	98.6
AUK10981.1\|1795264_1795798_+	lysozyme	Q6H9V6	Enterobacteria_phage	1.4e-99	94.9
AUK10982.1\|1796071_1796767_+	phage antirepressor protein	Q5MBW0	Stx1-converting_phage	2.8e-124	99.1
AUK14173.1\|1796995_1797463_+\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	2.0e-73	94.2
AUK14174.1\|1797492_1797693_+	hypothetical protein	Q9T1L1	Enterobacteria_phage	5.0e-10	76.9
AUK10983.1\|1797837_1798531_+\|transposase	IS1 family transposase	A0A0U2RK18	Escherichia_phage	1.1e-133	99.1
AUK10984.1\|1799256_1800942_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
1798968:1798987	attR	NA	NA	NA	NA
AUK10985.1\|1800938_1801658_+	DNA-binding response regulator	NA	NA	NA	NA
AUK10986.1\|1801704_1802175_+	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
AUK10987.1\|1802802_1804803_-	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.6

DBSCAN-SWA_5

1898711 : 1906307

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK11060.1\|1898711_1900106_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.7e-19	31.9
AUK11061.1\|1900262_1901258_+	N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase	A0A1V0QG29	Shearwaterpox_virus	1.9e-09	26.3
AUK11062.1\|1901500_1902394_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.0e-46	42.0
AUK11063.1\|1902430_1902694_-	hypothetical protein	NA	NA	NA	NA
AUK11064.1\|1902766_1903852_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.9e-101	54.5
AUK11065.1\|1903851_1904721_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	6.6e-107	66.3
AUK11066.1\|1904717_1905125_+	WxcM-like domain-containing protein	NA	NA	NA	NA
AUK11067.1\|1905203_1906307_+	DegT/DnrJ/EryC1/StrS family aminotransferase	E5ES42	Bathycoccus_sp._RCC1105_virus	2.4e-37	30.5

DBSCAN-SWA_6

1942599 : 1957419

Escherichia_phage(41.67%)

integrase,transposase

attL 1941094:1941108|attR 1954073:1954087

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1941094:1941108	attL	NA	NA	NA	NA
AUK11104.1\|1942599_1943382_-\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	1.3e-138	99.2
AUK11105.1\|1943378_1944401_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	4.6e-200	99.4
AUK11106.1\|1944414_1944528_-\|integrase	integrase	NA	NA	NA	NA
AUK11107.1\|1944629_1945843_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.6e-167	98.3
AUK11108.1\|1947258_1948608_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	4.0e-111	47.0
AUK11109.1\|1948610_1949824_-\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
AUK14179.1\|1949958_1950162_-	hypothetical protein	NA	NA	NA	NA
AUK11110.1\|1950161_1950536_-	toxin	NA	NA	NA	NA
AUK11111.1\|1950625_1951102_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
AUK11112.1\|1951156_1951378_-	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
AUK14180.1\|1951440_1951887_-	hypothetical protein	NA	NA	NA	NA
AUK11113.1\|1951932_1952406_-	antirestriction protein	A9J566	Pseudomonas_phage	1.5e-12	30.3
AUK11114.1\|1952442_1954056_-\|transposase	IS66 family transposase ISEc23	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
AUK11115.1\|1954086_1954437_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
1954073:1954087	attR	NA	NA	NA	NA
AUK11116.1\|1954433_1954796_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	5.6e-36	100.0
AUK11117.1\|1954858_1956071_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.6e-167	98.3
AUK11118.1\|1956253_1956601_-	hypothetical protein	NA	NA	NA	NA
AUK11119.1\|1956600_1957419_-	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	1.6e-46	39.7

DBSCAN-SWA_7

2021856 : 2079313

Enterobacteria_phage(34.0%)

tRNA,holin,transposase,portal,integrase,terminase,lysis,head,capsid,tail

attL 2003658:2003674|attR 2032849:2032865

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2003658:2003674	attL	NA	NA	NA	NA
AUK11163.1\|2021856_2023119_-\|integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	1.2e-72	39.0
AUK14182.1\|2023456_2024254_-	protein MtfA	NA	NA	NA	NA
AUK11164.1\|2024489_2025515_-\|integrase	integrase	A0A192Y7M7	Salmonella_phage	6.4e-101	57.3
AUK11165.1\|2025514_2025718_-	DUF4224 domain-containing protein	NA	NA	NA	NA
AUK11166.1\|2025776_2028248_-	exonuclease	A0A192Y6E0	Salmonella_phage	1.5e-55	56.0
AUK11167.1\|2028343_2028532_-	DUF1482 domain-containing protein	NA	NA	NA	NA
AUK11168.1\|2028528_2028717_-	cell division inhibitor	NA	NA	NA	NA
AUK11169.1\|2029206_2029359_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	8.7e-07	51.1
AUK11170.1\|2029677_2030154_-	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	5.7e-12	53.4
AUK11171.1\|2030278_2030602_+	transcriptional regulator	A0A0R6PH31	Moraxella_phage	6.2e-10	44.9
AUK11172.1\|2030585_2031011_+	Rha family transcriptional regulator	NA	NA	NA	NA
AUK11173.1\|2031033_2032002_+	DNA-binding protein	U5P0A0	Shigella_phage	7.6e-72	52.1
AUK11174.1\|2032008_2032755_+	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	9.0e-113	83.4
AUK11175.1\|2032776_2033547_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.6e-80	64.5
2032849:2032865	attR	NA	NA	NA	NA
AUK11176.1\|2033562_2033976_+	DUF977 domain-containing protein	A0A0U2QQN3	Escherichia_phage	9.8e-61	89.1
AUK11177.1\|2034327_2035101_-	iroE	NA	NA	NA	NA
AUK11178.1\|2035661_2036735_-\|transposase	IS481 family transposase	A0A0M3LR35	Mannheimia_phage	3.0e-08	23.8
AUK11179.1\|2036806_2036962_+	protein HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
AUK14183.1\|2037129_2037408_+	hypothetical protein	I6PCV7	Cronobacter_phage	1.6e-11	46.9
AUK11180.1\|2037409_2038456_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.2e-108	54.2
AUK11181.1\|2038468_2038828_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	3.0e-37	63.5
AUK11182.1\|2038836_2039367_+	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	9.3e-72	72.6
AUK11183.1\|2039485_2039806_+	lipoprotein	S5MQK8	Escherichia_phage	2.5e-35	97.4
AUK11184.1\|2039956_2041006_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	6.8e-199	95.4
AUK11185.1\|2043148_2043415_+	hypothetical protein	NA	NA	NA	NA
AUK11186.1\|2043559_2043688_+	hypothetical protein	NA	NA	NA	NA
AUK11187.1\|2043736_2045587_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	98.9
AUK11188.1\|2045710_2045872_-	hypothetical protein	NA	NA	NA	NA
AUK11189.1\|2045870_2046086_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	1.7e-32	97.2
AUK11190.1\|2046048_2046393_-	hypothetical protein	NA	NA	NA	NA
AUK11191.1\|2046341_2046578_-	hypothetical protein	NA	NA	NA	NA
AUK11192.1\|2046546_2046741_+	hypothetical protein	NA	NA	NA	NA
AUK11193.1\|2046773_2047307_+	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.1e-99	94.4
AUK11194.1\|2047527_2047641_+	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
AUK11195.1\|2047642_2048110_+\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	2.7e-67	87.0
AUK11196.1\|2048192_2048333_+	hypothetical protein	NA	NA	NA	NA
AUK11197.1\|2048575_2048890_+	PerC family transcriptional regulator	NA	NA	NA	NA
AUK11198.1\|2048971_2049196_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.9e-19	88.7
AUK11199.1\|2049597_2050107_+\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
AUK11200.1\|2050078_2052007_+\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	1.3e-259	65.6
AUK11201.1\|2051990_2052197_+\|tail	phage tail protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
AUK11202.1\|2052193_2053786_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.0e-182	61.0
AUK11203.1\|2053775_2055281_+	scaffolding protein	A0A2I6TC87	Escherichia_phage	1.6e-100	54.2
AUK11204.1\|2055317_2055665_+\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	2.6e-22	58.1
AUK11205.1\|2055722_2056751_+\|capsid	major capsid protein E	C6ZCY2	Enterobacteria_phage	1.7e-114	61.3
AUK11206.1\|2056754_2057177_+	hypothetical protein	NA	NA	NA	NA
AUK11207.1\|2057169_2057523_+\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	4.3e-41	69.2
AUK11208.1\|2057538_2058114_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.3e-50	58.3
AUK11209.1\|2058110_2058506_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
AUK11210.1\|2058513_2059266_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	4.6e-133	98.0
AUK11211.1\|2059279_2059711_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.7e-42	68.8
AUK11212.1\|2059737_2060151_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	2.7e-42	82.2
AUK11213.1\|2060131_2062711_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	82.9
AUK11214.1\|2062707_2063037_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	2.2e-55	95.4
AUK11215.1\|2063036_2063735_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	3.1e-131	98.7
AUK11216.1\|2063740_2064484_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	2.3e-145	96.8
AUK11217.1\|2064381_2065062_+\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	4.1e-112	98.2
AUK11218.1\|2065015_2065222_+	hypothetical protein	NA	NA	NA	NA
AUK11219.1\|2065252_2065780_-	superoxide dismutase	Q9MC02	Salmonella_phage	2.0e-58	59.9
AUK11220.1\|2065913_2069390_+\|tail	phage tail protein	Q6H9T2	Enterobacteria_phage	0.0e+00	95.6
AUK14184.1\|2069458_2070082_+	hypothetical protein	A0A1U8QHD6	Enterobacteria_phage	1.9e-68	60.9
AUK11221.1\|2070146_2071460_+\|tail	phage tail protein	H6WZM9	Escherichia_phage	1.2e-75	97.3
AUK11222.1\|2071461_2071731_+\|tail	phage tail protein	H6WZN0	Escherichia_phage	1.9e-44	97.8
AUK11223.1\|2072492_2073128_+	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	3.7e-75	92.0
AUK11224.1\|2073255_2074314_-	type III effector	NA	NA	NA	NA
AUK11225.1\|2074392_2075043_-	DUF1076 domain-containing protein	B6ETE1	Enterobacteria_phage	1.1e-37	40.7
AUK11226.1\|2075226_2075817_+	bfpT-regulated chaperone	NA	NA	NA	NA
AUK11227.1\|2076062_2076311_-	damage-inducible protein DinI	K7PLW4	Enterobacteria_phage	3.8e-36	93.9
AUK14185.1\|2076466_2076583_+	preprotein translocase subunit SecY	NA	NA	NA	NA
AUK11228.1\|2076664_2077231_-	isochorismatase	NA	NA	NA	NA
AUK11229.1\|2077540_2079313_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA

DBSCAN-SWA_8

2351756 : 2419240

Enterobacteria_phage(43.75%)

transposase,protease,integrase,portal,terminase,lysis,head,capsid,tail

attL 2359332:2359347|attR 2392109:2392124

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK11492.1\|2351756_2352578_-\|protease	serine protease	NA	NA	NA	NA
AUK11493.1\|2352677_2352761_-	hypothetical protein	NA	NA	NA	NA
AUK11494.1\|2352853_2353189_-	acid shock protein	NA	NA	NA	NA
AUK11495.1\|2353585_2354839_-	MFS transporter	NA	NA	NA	NA
AUK11496.1\|2354945_2355839_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK11497.1\|2355973_2357194_+	protein mlc	NA	NA	NA	NA
AUK11498.1\|2357318_2358014_+	dethiobiotin synthase	NA	NA	NA	NA
AUK14199.1\|2357966_2359259_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA
2359332:2359347	attL	NA	NA	NA	NA
AUK11499.1\|2359417_2360032_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
AUK11500.1\|2360074_2360929_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
AUK11501.1\|2360930_2361548_-	dimethylsulfoxide reductase	A0A077SL61	Escherichia_phage	9.5e-76	59.6
AUK11502.1\|2364043_2365153_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	4.1e-85	47.2
AUK11503.1\|2365378_2366758_+\|integrase	integrase	NA	NA	NA	NA
AUK11504.1\|2367281_2367650_+	hypothetical protein	NA	NA	NA	NA
AUK11505.1\|2368030_2369122_+	AP2 domain-containing protein	NA	NA	NA	NA
AUK11506.1\|2369121_2369334_+	hypothetical protein	NA	NA	NA	NA
AUK11507.1\|2369447_2369939_+	hypothetical protein	NA	NA	NA	NA
AUK11508.1\|2370044_2371031_+	hypothetical protein	NA	NA	NA	NA
AUK11509.1\|2371629_2373108_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	3.0e-120	50.1
AUK11510.1\|2373306_2373612_-	DUF1161 domain-containing protein	NA	NA	NA	NA
AUK14200.1\|2373719_2374430_+	YnfC family lipoprotein	NA	NA	NA	NA
AUK11511.1\|2374432_2374993_-	spermidine acetyltransferase	NA	NA	NA	NA
AUK11512.1\|2375027_2375369_-	hypothetical protein	NA	NA	NA	NA
AUK11513.1\|2375503_2375830_+	hypothetical protein	A0A218MNG8	uncultured_virus	7.6e-24	55.6
AUK11514.1\|2375866_2376055_+	hypothetical protein	NA	NA	NA	NA
AUK11515.1\|2376035_2377250_+	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
AUK11516.1\|2377261_2378281_+	starvation-sensing protein RspB	E3SJ82	Synechococcus_phage	4.3e-17	26.2
AUK11517.1\|2378338_2378467_+	transporter	NA	NA	NA	NA
AUK11518.1\|2378468_2379764_-\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	2.5e-155	62.1
AUK11519.1\|2379783_2380035_-	DNA-binding protein	S4TND0	Salmonella_phage	2.2e-15	50.0
AUK11520.1\|2382165_2382345_+	hypothetical protein	NA	NA	NA	NA
AUK11521.1\|2382319_2382502_-	hypothetical protein	Q7Y2Q9	Escherichia_phage	6.3e-12	74.5
AUK11522.1\|2382679_2383993_+\|transposase	transposase	NA	NA	NA	NA
AUK11523.1\|2384429_2384762_-	protein FlxA	NA	NA	NA	NA
AUK11524.1\|2384964_2385270_-	hypothetical protein	NA	NA	NA	NA
AUK11525.1\|2385294_2385534_+	antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
AUK11526.1\|2385533_2385821_+	mRNA interferase RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
AUK11527.1\|2385892_2386048_+	protein HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
AUK11528.1\|2386264_2386516_+	hypothetical protein	NA	NA	NA	NA
AUK11529.1\|2386582_2386861_+	hypothetical protein	NA	NA	NA	NA
AUK11530.1\|2386862_2387912_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	6.3e-112	57.3
AUK11531.1\|2387925_2388678_+	antitermination protein	A0A192Y5X6	Salmonella_phage	2.7e-133	92.4
AUK11532.1\|2389099_2389312_-	cold-shock protein CspF	NA	NA	NA	NA
AUK11533.1\|2389612_2389828_+	cold-shock protein CspB	A0A1W6JNX5	Morganella_phage	3.4e-25	76.5
AUK11534.1\|2390581_2390797_+\|lysis	lysis protein S	A5LH82	Enterobacteria_phage	1.1e-31	94.4
AUK11535.1\|2390801_2391113_+	hypothetical protein	K7PGU6	Enterobacteria_phage	2.0e-26	64.6
AUK11536.1\|2391109_2391643_+	lysozyme from lambdoid prophage Qin	K7PLY1	Enterobacteria_phage	6.4e-97	93.2
AUK11537.1\|2391639_2392137_+	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	2.2e-06	29.5
2392109:2392124	attR	NA	NA	NA	NA
AUK11538.1\|2392500_2392713_+	cold-shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
AUK11539.1\|2392723_2392912_+	cold-shock protein	NA	NA	NA	NA
AUK14201.1\|2393059_2393215_+	hypothetical protein	NA	NA	NA	NA
AUK11540.1\|2393386_2393566_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
AUK11541.1\|2393717_2394128_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	1.6e-55	78.7
AUK11542.1\|2394185_2394419_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	5.6e-21	82.5
AUK11543.1\|2394807_2395353_+\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	8.1e-95	98.9
AUK11544.1\|2395327_2397253_+\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.2
AUK11545.1\|2397249_2397456_+\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
AUK11546.1\|2397452_2399054_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.9e-309	99.1
AUK11547.1\|2399034_2400354_+\|capsid	capsid assembly protein	A0A2I6TC87	Escherichia_phage	1.6e-234	98.9
AUK11548.1\|2400363_2400696_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	5.0e-55	99.1
AUK11549.1\|2400751_2401777_+\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	2.3e-191	99.1
AUK11550.1\|2401818_2402214_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	4.5e-55	93.2
AUK11551.1\|2402225_2402579_+\|tail	phage tail protein	A0A2R9YJJ5	Escherichia_phage	7.6e-62	99.1
AUK11552.1\|2402590_2403169_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.7e-79	97.4
AUK11553.1\|2403165_2403561_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	8.5e-70	98.5
AUK14202.1\|2403568_2404309_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	4.0e-129	97.2
AUK11554.1\|2404324_2404747_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.9e-70	95.7
AUK11555.1\|2404728_2405163_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	2.0e-64	99.2
AUK11556.1\|2405155_2407735_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	91.5
AUK11557.1\|2407731_2408061_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	8.1e-58	98.2
AUK11558.1\|2408060_2408759_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.1e-132	98.7
AUK11559.1\|2408764_2409508_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	8.6e-148	97.2
AUK11560.1\|2409405_2410047_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.0e-96	86.5
AUK11561.1\|2410107_2413587_+	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	89.3
AUK11562.1\|2413655_2414255_+	Ail/Lom family protein	A5LH44	Enterobacteria_phage	6.3e-109	96.5
AUK11563.1\|2414319_2417427_+\|tail	phage tail protein	X2KTY7	Enterobacteria_phage	3.1e-82	59.9
AUK11564.1\|2417426_2418002_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.8e-105	96.9
AUK11565.1\|2418099_2418690_-	DNA invertase	A0A0A7NPV4	Enterobacteria_phage	1.5e-25	39.3
AUK11566.1\|2419006_2419240_-	hypothetical protein	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3

DBSCAN-SWA_9

2528821 : 2586981

Escherichia_phage(25.0%)

transposase,portal,terminase,capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK11653.1\|2528821_2529958_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
AUK14206.1\|2530285_2530384_+	hypothetical protein	A0A0U2RK18	Escherichia_phage	2.3e-08	84.4
AUK14207.1\|2530405_2530615_-	hypothetical protein	NA	NA	NA	NA
AUK11654.1\|2530812_2535021_-	RHS element protein	A0A2H4JHK7	uncultured_Caudovirales_phage	3.2e-21	43.0
AUK11655.1\|2535088_2537197_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.8e-26	25.0
AUK11656.1\|2538017_2538230_-	hypothetical protein	NA	NA	NA	NA
AUK11657.1\|2538305_2538923_-	glutathione S-transferase family protein	NA	NA	NA	NA
AUK11658.1\|2539189_2540689_+	L-asparagine permease	NA	NA	NA	NA
AUK11659.1\|2540801_2541863_-	hypothetical protein	NA	NA	NA	NA
AUK11660.1\|2541945_2542071_+	tonB-dependent receptor yncD	NA	NA	NA	NA
AUK14208.1\|2542010_2542190_-	hypothetical protein	NA	NA	NA	NA
AUK11661.1\|2542104_2544207_+	TonB-dependent siderophore receptor	A0A1B0VCF0	Salmonella_phage	1.8e-134	65.6
AUK11662.1\|2544242_2544908_-	colanic acid/biofilm transcriptional regulator	NA	NA	NA	NA
AUK11663.1\|2545105_2546143_-	NADP-dependent oxidoreductase	NA	NA	NA	NA
AUK11664.1\|2546323_2546842_+	L-amino acid N-acyltransferase MnaT	NA	NA	NA	NA
AUK11665.1\|2546838_2547288_+	hypothetical protein	NA	NA	NA	NA
AUK11666.1\|2547288_2547522_-	DUF2526 domain-containing protein	NA	NA	NA	NA
AUK11667.1\|2547607_2547829_-	GhoT/OrtT family toxin	NA	NA	NA	NA
AUK14209.1\|2547799_2547979_+	hypothetical protein	NA	NA	NA	NA
AUK11668.1\|2547975_2548071_+	stress response membrane protein YncL	NA	NA	NA	NA
AUK11669.1\|2548472_2549282_-	acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	5.0e-16	40.4
AUK11670.1\|2549491_2550916_-	gamma-aminobutyraldehyde dehydrogenase	NA	NA	NA	NA
AUK11671.1\|2550937_2551732_-	ABC transporter permease	NA	NA	NA	NA
AUK11672.1\|2551721_2552663_-	spermidine/putrescine ABC transporter permease	NA	NA	NA	NA
AUK11673.1\|2552663_2553677_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.1e-27	37.9
AUK11674.1\|2553694_2554840_-	spermidine/putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK11675.1\|2555081_2556491_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUK14210.1\|2556569_2556695_-	transcriptional regulator	NA	NA	NA	NA
AUK11676.1\|2556725_2556998_+	hypothetical protein	A0A1D7XF78	Escherichia_phage	1.8e-18	52.2
AUK11677.1\|2557047_2557434_+	hypothetical protein	C4MZ15	Escherichia_phage	7.9e-12	47.3
AUK11678.1\|2557742_2558162_+	hypothetical protein	NA	NA	NA	NA
AUK11679.1\|2558225_2559905_+	recombinase family protein	Q6V7T7	Burkholderia_virus	7.9e-40	27.8
AUK11680.1\|2559894_2560167_+	hypothetical protein	NA	NA	NA	NA
AUK11681.1\|2560249_2560447_-	hypothetical protein	NA	NA	NA	NA
AUK11682.1\|2560439_2560793_-	serine/threonine protein kinase	A0A2K9VAY0	Citrobacter_phage	5.0e-37	62.6
AUK11683.1\|2560802_2561150_-	hypothetical protein	NA	NA	NA	NA
AUK14211.1\|2561188_2561482_-	hypothetical protein	NA	NA	NA	NA
AUK11684.1\|2562063_2562342_-	hypothetical protein	NA	NA	NA	NA
AUK11685.1\|2566641_2567001_-	hypothetical protein	NA	NA	NA	NA
AUK11686.1\|2567000_2567435_-	hypothetical protein	NA	NA	NA	NA
AUK11687.1\|2567466_2568237_-	hypothetical protein	A0A193GZN1	Shigella_phage	8.1e-08	35.3
AUK14212.1\|2568311_2568881_-	DUF2163 domain-containing protein	NA	NA	NA	NA
AUK11688.1\|2568964_2569525_-	hypothetical protein	NA	NA	NA	NA
AUK11689.1\|2569575_2572005_-	hypothetical protein	A0A0M3LS69	Mannheimia_phage	1.8e-21	33.6
AUK11690.1\|2572016_2572358_-	hypothetical protein	NA	NA	NA	NA
AUK11691.1\|2572387_2572696_-	cytochrome	NA	NA	NA	NA
AUK11692.1\|2572778_2573249_-	hypothetical protein	NA	NA	NA	NA
AUK11693.1\|2573365_2573590_-	hypothetical protein	NA	NA	NA	NA
AUK11694.1\|2573605_2573911_-	hypothetical protein	NA	NA	NA	NA
AUK11695.1\|2573913_2574210_-	hypothetical protein	NA	NA	NA	NA
AUK11696.1\|2574292_2575405_+\|transposase	IS4 family transposase	NA	NA	NA	NA
AUK11697.1\|2575597_2579128_-\|tail	phage tail protein	K7DVC6	Escherichia_phage	5.0e-04	46.9
AUK11698.1\|2579201_2580035_-	hypothetical protein	NA	NA	NA	NA
AUK11699.1\|2580044_2580467_-	hypothetical protein	NA	NA	NA	NA
AUK11700.1\|2580450_2580741_-	hypothetical protein	NA	NA	NA	NA
AUK11701.1\|2580932_2582939_-\|capsid	major capsid protein	A0A2I5ARA4	Synechococcus_phage	3.1e-27	23.6
AUK11702.1\|2582984_2584496_-\|portal	phage portal protein	K4I1F2	Acidithiobacillus_phage	1.1e-32	27.0
AUK11703.1\|2584506_2585001_-	hypothetical protein	NA	NA	NA	NA
AUK11704.1\|2585073_2586981_-\|terminase	terminase	D6PFE7	uncultured_phage	2.8e-33	30.4

DBSCAN-SWA_10

2744724 : 2815075

Enterobacteria_phage(38.46%)

holin,transposase,protease,portal,integrase,terminase,head,capsid,lysis,tail

attL 2812978:2812992|attR 2818907:2818921

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK11843.1\|2744724_2745774_-\|protease	protease	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5
AUK11844.1\|2745993_2746752_+	NAD(P)-dependent oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	1.5e-06	23.9
AUK11845.1\|2746748_2747339_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
AUK11846.1\|2747378_2748254_-	23S rRNA pseudouridylate synthase B	NA	NA	NA	NA
AUK11847.1\|2748466_2750362_-	DUF2207 domain-containing protein	NA	NA	NA	NA
AUK11848.1\|2750389_2751010_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
AUK11849.1\|2751006_2751888_-	phosphatase	NA	NA	NA	NA
AUK14218.1\|2752025_2752070_+	trp operon leader peptide	NA	NA	NA	NA
AUK11850.1\|2752161_2753724_+	anthranilate synthase component I	NA	NA	NA	NA
AUK11851.1\|2753723_2755319_+	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	3.8e-52	38.5
AUK14219.1\|2755322_2756681_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	8.6e-37	40.7
AUK11852.1\|2756692_2757886_+	tryptophan synthase subunit beta	NA	NA	NA	NA
AUK11853.1\|2757885_2758692_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
AUK11854.1\|2759072_2759252_+	hypothetical protein	NA	NA	NA	NA
AUK11855.1\|2759337_2759838_+	YciE/YciF family protein	NA	NA	NA	NA
AUK11856.1\|2759883_2760390_+	YciE/YciF family protein	NA	NA	NA	NA
AUK11857.1\|2760759_2761035_+	hypothetical protein	S5MQL6	Escherichia_phage	1.1e-10	52.9
AUK11858.1\|2761031_2761589_+	Rha family transcriptional regulator	Q8H9L9	Vibrio_phage	4.2e-30	63.8
AUK11859.1\|2762000_2762270_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	9.3e-20	79.4
AUK14220.1\|2762368_2762995_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AUK11860.1\|2762939_2763077_-\|capsid	nucleocapsid protein	NA	NA	NA	NA
AUK11861.1\|2763049_2763634_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.6e-103	94.8
AUK11862.1\|2763633_2766660_-	hypothetical protein	A0A0K2FIZ6	Escherichia_phage	2.2e-48	84.7
AUK11863.1\|2766811_2767411_-	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	2.0e-107	96.5
AUK11864.1\|2767478_2770958_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	89.5
AUK11865.1\|2771118_2771304_+	hypothetical protein	NA	NA	NA	NA
AUK11866.1\|2771435_2772077_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	5.6e-95	85.1
AUK11867.1\|2771974_2772718_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.0e-144	94.3
AUK11868.1\|2772722_2773421_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.1e-132	98.7
AUK11869.1\|2773420_2773750_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	8.1e-58	98.2
AUK11870.1\|2773749_2776320_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	85.3
AUK11871.1\|2776300_2776714_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
AUK11872.1\|2776740_2777172_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.8e-41	68.1
AUK11873.1\|2777185_2777938_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	1.2e-133	98.4
AUK11874.1\|2777945_2778341_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
AUK11875.1\|2778337_2778913_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.1e-48	56.8
AUK11876.1\|2778927_2779281_-\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	3.0e-42	70.1
AUK11877.1\|2779273_2779642_-	hypothetical protein	NA	NA	NA	NA
AUK11878.1\|2779693_2780722_-\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	2.8e-112	60.4
AUK11879.1\|2780779_2781127_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	8.9e-23	58.1
AUK11880.1\|2781163_2782669_-	scaffolding protein	A0A0K2FI53	Enterobacteria_phage	7.9e-100	53.1
AUK11881.1\|2782658_2784251_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	1.0e-182	60.7
AUK11882.1\|2784247_2784454_-\|tail	phage tail protein	K7PM10	Enterobacteria_phage	3.9e-10	55.4
AUK11883.1\|2784437_2786366_-\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	9.7e-260	66.6
AUK11884.1\|2786337_2786754_-	DNA packaging protein	A0A0U2S671	Escherichia_phage	3.9e-41	93.6
AUK11885.1\|2786825_2788038_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.4e-163	96.3
AUK11886.1\|2788610_2789678_+	hypothetical protein	NA	NA	NA	NA
AUK11887.1\|2789619_2790240_-	hypothetical protein	A0A0U2RXY7	Escherichia_phage	5.1e-53	53.7
AUK11888.1\|2790656_2791094_-\|lysis	lysis protein	A0A088CBQ1	Shigella_phage	5.7e-67	93.8
AUK11889.1\|2791392_2791926_-	lysozyme	Q6H9V6	Enterobacteria_phage	2.4e-99	94.4
AUK11890.1\|2791989_2792340_-	DUF1327 domain-containing protein	K7PGU6	Enterobacteria_phage	8.4e-37	94.0
AUK11891.1\|2792344_2792560_-\|holin	holin	G9L6J5	Escherichia_phage	9.0e-34	100.0
AUK11892.1\|2792709_2794563_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	Q08JA2	Stx2-converting_phage	0.0e+00	90.3
AUK11893.1\|2795103_2795325_-	hypothetical protein	NA	NA	NA	NA
AUK11894.1\|2795837_2796887_-	DNA adenine methylase	A0A0N7KZF8	Stx2-converting_phage	8.8e-199	95.7
AUK11895.1\|2796950_2798564_-\|transposase	IS66 family transposase ISEc23	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
AUK11896.1\|2798594_2798945_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
AUK11897.1\|2798941_2799367_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
AUK11898.1\|2799577_2799775_-	TrmB family transcriptional regulator	Q9MC00	Enterobacteria_phage	2.1e-29	100.0
AUK11899.1\|2800001_2800823_-	antitermination protein	K7P7B9	Enterobacteria_phage	8.5e-80	60.1
AUK11900.1\|2800819_2801194_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.1e-34	62.7
AUK11901.1\|2801206_2802253_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.3e-109	54.8
AUK11902.1\|2802254_2802533_-	hypothetical protein	I6PCV7	Cronobacter_phage	9.7e-12	48.4
AUK11903.1\|2802599_2802851_-	hypothetical protein	NA	NA	NA	NA
AUK11904.1\|2803067_2803280_-	hypothetical protein	A0A0U2QV81	Escherichia_phage	3.1e-26	92.9
AUK11905.1\|2803438_2803675_-	hypothetical protein	NA	NA	NA	NA
AUK11906.1\|2803965_2804661_+	hypothetical protein	NA	NA	NA	NA
AUK11907.1\|2804673_2805327_+	methyltransferase domain-containing protein	NA	NA	NA	NA
AUK11908.1\|2805641_2806541_-	regulator	NA	NA	NA	NA
AUK11909.1\|2806793_2807216_-	DUF977 domain-containing protein	A0A0U2QQN3	Escherichia_phage	4.8e-63	91.8
AUK11910.1\|2807256_2808276_-	hypothetical protein	U5P0A0	Shigella_phage	2.8e-56	60.8
AUK11911.1\|2808202_2808724_-	hypothetical protein	NA	NA	NA	NA
AUK11912.1\|2808707_2808935_-	transcriptional regulator	NA	NA	NA	NA
AUK11913.1\|2808961_2809420_+	transcriptional regulator	I6PD69	Cronobacter_phage	2.8e-24	46.2
AUK11914.1\|2809612_2809768_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	3.0e-07	53.2
AUK11915.1\|2809727_2809898_+	hypothetical protein	NA	NA	NA	NA
AUK11916.1\|2809927_2810146_+	hypothetical protein	NA	NA	NA	NA
AUK11917.1\|2810149_2810458_-	hypothetical protein	NA	NA	NA	NA
AUK11918.1\|2810713_2810902_+	cell division inhibition protein DicB	NA	NA	NA	NA
AUK11919.1\|2810898_2811090_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AUK11920.1\|2811182_2813654_+	exonuclease	A0A192Y6E0	Salmonella_phage	5.7e-55	56.0
2812978:2812992	attL	NA	NA	NA	NA
AUK11921.1\|2813718_2813967_+	excisionase	NA	NA	NA	NA
AUK11922.1\|2813944_2815075_+\|integrase	integrase	O21940	Phage_21	2.2e-102	51.1
2818907:2818921	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2920555 : 2991715

102

Enterobacteria_phage(42.19%)

tRNA,holin,transposase,portal,integrase,terminase,head,capsid,lysis,tail

attL 2929626:2929641|attR 3003071:3003086

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK12019.1\|2920555_2921662_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
AUK14230.1\|2921697_2922339_+	lysogenization protein HflD	NA	NA	NA	NA
AUK12020.1\|2922342_2923713_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.2e-108	44.9
AUK12021.1\|2923880_2924552_+	two-component system response regulator PhoP	NA	NA	NA	NA
AUK12022.1\|2924551_2926012_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
AUK12023.1\|2926613_2926895_-	hypothetical protein	NA	NA	NA	NA
AUK12024.1\|2927151_2927694_-\|terminase	terminase	O64316	Escherichia_phage	1.8e-33	44.2
AUK12025.1\|2927899_2928313_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
AUK12026.1\|2928325_2928661_-\|head	head decoration protein	NA	NA	NA	NA
AUK12027.1\|2928673_2929729_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.5e-68	43.3
2929626:2929641	attL	NA	NA	NA	NA
AUK12028.1\|2929728_2929935_-	hypothetical protein	NA	NA	NA	NA
AUK12029.1\|2930186_2930411_-	hypothetical protein	NA	NA	NA	NA
AUK12030.1\|2930452_2930581_-	trigger factor	NA	NA	NA	NA
AUK12031.1\|2930537_2930810_-	PerC family transcriptional regulator	NA	NA	NA	NA
AUK12032.1\|2930820_2931231_-	single-stranded DNA-binding protein	NA	NA	NA	NA
AUK12033.1\|2931227_2931479_-	hypothetical protein	NA	NA	NA	NA
AUK12034.1\|2931679_2933080_-	DNA primase	A0A2H4JFA4	uncultured_Caudovirales_phage	9.6e-116	49.6
AUK12035.1\|2933076_2933376_-	DUF4222 domain-containing protein	NA	NA	NA	NA
AUK12036.1\|2933381_2933615_-	hypothetical protein	NA	NA	NA	NA
AUK12037.1\|2933607_2934072_-	hypothetical protein	NA	NA	NA	NA
AUK12038.1\|2934061_2934274_-	hypothetical protein	NA	NA	NA	NA
AUK14231.1\|2934266_2934464_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
AUK12039.1\|2935268_2935457_-	AlpA family transcriptional regulator	A0A2H4JB58	uncultured_Caudovirales_phage	2.0e-13	66.0
AUK12040.1\|2935821_2937051_-\|integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	3.8e-132	56.1
AUK12041.1\|2937299_2938421_+	50S ribosomal protein L16 arginine hydroxylase	NA	NA	NA	NA
AUK12042.1\|2938469_2939696_-	peptidase T	NA	NA	NA	NA
AUK12043.1\|2939751_2939967_+	hypothetical protein	NA	NA	NA	NA
AUK12044.1\|2939945_2941082_+	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	9.4e-29	39.8
AUK12045.1\|2941065_2941929_+	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
AUK12046.1\|2941959_2942172_+	hypothetical protein	NA	NA	NA	NA
AUK12047.1\|2942292_2943654_+	type III secretion protein GogB	Q9MBM1	Phage_Gifsy-1	2.1e-51	29.4
AUK12048.1\|2943716_2943992_+	secretion protein EspO	NA	NA	NA	NA
AUK12049.1\|2944071_2945052_-	non-LEE encoded effector protein NleB	Q8HAB2	Salmonella_phage	1.0e-87	49.5
AUK12050.1\|2945228_2945498_-\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	9.3e-44	97.8
AUK12051.1\|2946876_2947476_-	Ail/Lom family protein	A0A0P0ZE39	Stx2-converting_phage	3.7e-109	99.0
AUK12052.1\|2947542_2951022_-	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	89.5
AUK12053.1\|2951082_2951754_-\|tail	tail assembly protein	C6ZCZ4	Enterobacteria_phage	6.0e-100	97.3
AUK12054.1\|2951651_2952395_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	3.4e-144	94.3
AUK12055.1\|2952399_2953098_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	8.9e-131	97.8
AUK12056.1\|2953097_2953427_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	8.1e-58	98.2
AUK12057.1\|2953423_2955985_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	86.8
AUK12058.1\|2955965_2956379_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	8.6e-41	79.2
AUK12059.1\|2956405_2956837_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.8e-42	67.3
AUK12060.1\|2956850_2957603_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	4.6e-133	98.0
AUK12061.1\|2957610_2958006_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
AUK12062.1\|2958002_2958536_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.2e-58	66.7
AUK12063.1\|2958551_2958905_-\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	5.7e-41	69.2
AUK12064.1\|2958897_2959281_-	DNA-packaging protein FI	NA	NA	NA	NA
AUK12065.1\|2959332_2960361_-\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	3.6e-112	61.0
AUK12066.1\|2960418_2960766_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	6.8e-23	58.1
AUK12067.1\|2960802_2962308_-	scaffolding protein	A0A2I6TC87	Escherichia_phage	3.0e-99	53.5
AUK12068.1\|2962297_2963890_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	7.1e-184	60.9
AUK12069.1\|2963886_2964093_-\|tail	phage tail protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
AUK12070.1\|2964076_2966005_-\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	1.4e-261	66.2
AUK14232.1\|2965976_2966483_-	DNA-packaging protein	O64316	Escherichia_phage	1.5e-34	47.9
AUK12071.1\|2966909_2967134_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.9e-19	88.7
AUK12072.1\|2967215_2967530_-	PerC family transcriptional regulator	NA	NA	NA	NA
AUK12073.1\|2967772_2967913_-	hypothetical protein	NA	NA	NA	NA
AUK12074.1\|2967995_2968463_-\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	3.6e-67	87.7
AUK12075.1\|2968464_2968578_-	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
AUK12076.1\|2968798_2969332_-	lysozyme	A0A1U9AJ98	Stx1_converting_phage	1.4e-99	94.9
AUK12077.1\|2969364_2969559_-	hypothetical protein	NA	NA	NA	NA
AUK12078.1\|2969527_2969764_+	hypothetical protein	NA	NA	NA	NA
AUK12079.1\|2969712_2970057_+	hypothetical protein	NA	NA	NA	NA
AUK12080.1\|2970019_2970235_-\|holin	holin	Q6H9V8	Enterobacteria_phage	1.7e-32	97.2
AUK12081.1\|2970233_2970380_+	hypothetical protein	NA	NA	NA	NA
AUK12082.1\|2970674_2972525_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	96.1
AUK12083.1\|2972573_2972702_-	hypothetical protein	NA	NA	NA	NA
AUK12084.1\|2972846_2973113_-	hypothetical protein	NA	NA	NA	NA
AUK12085.1\|2973003_2973435_-	tellurite resistance protein	H6WZJ6	Escherichia_phage	1.6e-66	96.5
AUK12086.1\|2973885_2974599_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUK12087.1\|2974733_2974931_-	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	1.4e-28	96.9
AUK12088.1\|2975046_2975226_-	hypothetical protein	A0A0N7BTS3	Escherichia_phage	2.3e-06	96.2
AUK12089.1\|2975191_2976405_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	1.0e-166	97.6
AUK12090.1\|2976468_2977023_-	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	3.0e-65	66.9
AUK12091.1\|2977031_2977391_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	4.3e-36	60.3
AUK12092.1\|2977390_2977633_-	hypothetical protein	Q8W639	Enterobacteria_phage	1.6e-34	97.5
AUK12093.1\|2977644_2979045_-	replicative DNA helicase	Q8W640	Enterobacteria_phage	5.4e-252	94.8
AUK12094.1\|2979041_2979932_-	AAA family ATPase	Q8W641	Enterobacteria_phage	2.6e-82	63.3
AUK12095.1\|2979949_2980843_-	DNA-binding protein	C5IHL2	Burkholderia_virus	2.1e-60	45.9
AUK12096.1\|2980829_2981063_-	hypothetical protein	A0A1C9II64	Salmonella_phage	9.5e-13	50.0
AUK12097.1\|2981059_2981254_-	hypothetical protein	NA	NA	NA	NA
AUK12098.1\|2981250_2981913_-	hypothetical protein	Q8W643	Enterobacteria_phage	4.2e-98	83.2
AUK14233.1\|2982021_2982729_-	DNA-binding protein	Q8W645	Enterobacteria_phage	1.3e-124	97.4
AUK12099.1\|2982848_2983142_+	hypothetical protein	NA	NA	NA	NA
AUK12100.1\|2983212_2983485_-	Cro/Cl family transcriptional regulator	A0A1B5FPK9	Escherichia_phage	2.1e-35	89.6
AUK12101.1\|2983618_2984308_+	hypothetical protein	A0A1B5FPF4	Escherichia_phage	8.0e-116	87.8
AUK12102.1\|2984452_2985145_+	transcriptional regulator	A0A1B5FPB8	Escherichia_phage	1.1e-40	69.2
AUK12103.1\|2985150_2985351_+	hypothetical protein	NA	NA	NA	NA
AUK12104.1\|2985550_2985910_+	hypothetical protein	A0A1B5FPB3	Escherichia_phage	1.4e-42	73.1
AUK12105.1\|2985909_2986125_+	hypothetical protein	A0A1B5FPB7	Escherichia_phage	1.2e-17	63.4
AUK12106.1\|2986096_2986315_+	hypothetical protein	A0A286S1P6	Klebsiella_phage	3.1e-21	75.0
AUK12107.1\|2986311_2986704_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	4.7e-36	57.9
AUK12108.1\|2986764_2986953_+	hypothetical protein	NA	NA	NA	NA
AUK12109.1\|2987321_2987693_+	hypothetical protein	Q8W655	Enterobacteria_phage	3.8e-64	98.4
AUK12110.1\|2987724_2987967_+	DUF4222 domain-containing protein	Q8W656	Enterobacteria_phage	2.4e-35	92.5
AUK12111.1\|2987970_2988117_+	hypothetical protein	A0A1B5FPC2	Escherichia_phage	3.1e-22	95.8
AUK12112.1\|2988125_2988362_+	excisionase	Q8W657	Enterobacteria_phage	8.4e-41	98.7
AUK12113.1\|2988417_2989731_+\|integrase	integrase	Q8W658	Enterobacteria_phage	2.8e-250	97.0
AUK12114.1\|2989712_2990483_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.1e-72	99.2
AUK12115.1\|2990535_2990931_+	hypothetical protein	NA	NA	NA	NA
AUK12116.1\|2990971_2991715_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
3003071:3003086	attR	NA	NA	NA	NA

DBSCAN-SWA_12

3049178 : 3132551

105

Enterobacteria_phage(30.51%)

holin,transposase,integrase,terminase,head,capsid,lysis,tail

attL 3114468:3114488|attR 3141038:3141058

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK12174.1\|3049178_3049457_+\|integrase	integrase	A0A286S1S8	Klebsiella_phage	8.5e-08	51.1
AUK14235.1\|3049376_3049691_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
AUK12175.1\|3049735_3049930_-	hypothetical protein	NA	NA	NA	NA
AUK12176.1\|3049905_3051564_+	flagellar M-ring protein	NA	NA	NA	NA
AUK12177.1\|3051556_3052552_+	flagellar motor switch protein FliG	NA	NA	NA	NA
AUK12178.1\|3052544_3053231_+	flagellar assembly protein FliH	NA	NA	NA	NA
AUK12179.1\|3053230_3054604_+	flagellum-specific ATP synthase FliI	NA	NA	NA	NA
AUK12180.1\|3054622_3055066_+	flagellar protein FliJ	NA	NA	NA	NA
AUK12181.1\|3055062_3056190_+	flagellar hook length control protein FliK	NA	NA	NA	NA
AUK12182.1\|3056294_3056759_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
AUK12183.1\|3056763_3057768_+	flagellar motor switch protein FliM	NA	NA	NA	NA
AUK12184.1\|3057764_3058178_+	flagellar motor switch protein FliN	NA	NA	NA	NA
AUK12185.1\|3058180_3058546_+	flagellar protein FliO	NA	NA	NA	NA
AUK12186.1\|3058545_3059283_+	flagellar biosynthetic protein FliP	NA	NA	NA	NA
AUK12187.1\|3059292_3059562_+	flagellar biosynthetic protein FliQ	NA	NA	NA	NA
AUK12188.1\|3059569_3060355_+	flagellar type III secretion system protein FliR	NA	NA	NA	NA
AUK12189.1\|3060644_3061268_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AUK12190.1\|3061311_3061554_-	DsrB protein	NA	NA	NA	NA
AUK12191.1\|3061486_3061675_-	hypothetical protein	NA	NA	NA	NA
AUK12192.1\|3061662_3061890_+	DUF2525 domain-containing protein	NA	NA	NA	NA
AUK12193.1\|3062187_3063003_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
AUK12194.1\|3062999_3064694_-	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	1.3e-18	35.6
AUK12195.1\|3064614_3064803_-	hypothetical protein	NA	NA	NA	NA
AUK12196.1\|3064931_3065114_-	DUF2158 domain-containing protein	NA	NA	NA	NA
AUK12197.1\|3065192_3066110_-	hypothetical protein	NA	NA	NA	NA
AUK12198.1\|3066282_3067203_+	drug/metabolite exporter YedA	NA	NA	NA	NA
AUK12199.1\|3067191_3067662_-	very short patch repair endonuclease	E5E3X5	Burkholderia_phage	4.4e-33	47.6
AUK12200.1\|3067642_3069061_-	DNA (cytosine-5-)-methyltransferase	E5E3X6	Burkholderia_phage	4.0e-101	54.8
AUK12201.1\|3071169_3072528_-	two-component sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	5.1e-05	19.4
AUK14236.1\|3072527_3073199_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	5.4e-32	35.2
AUK12202.1\|3073331_3073745_+	5-hydroxyisourate hydrolase	NA	NA	NA	NA
AUK12203.1\|3073853_3074858_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
AUK12204.1\|3074858_3075494_+	sulfoxide reductase heme-binding subunit YedZ	NA	NA	NA	NA
AUK12205.1\|3075750_3076401_+	metal-binding protein ZinT	NA	NA	NA	NA
AUK12206.1\|3076436_3076766_+	hypothetical protein	NA	NA	NA	NA
AUK12207.1\|3077845_3078415_-	type III effector	NA	NA	NA	NA
AUK12208.1\|3079543_3079675_-	hypothetical protein	K7PMH7	Enterobacteria_phage	1.5e-07	76.5
AUK12209.1\|3079697_3079961_-	T3SS effector NleC domain protein	NA	NA	NA	NA
AUK12210.1\|3080021_3081002_-	non-LEE encoded effector protein NleB	Q8HAB2	Salmonella_phage	2.5e-86	49.5
AUK12211.1\|3081178_3081448_-\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	5.4e-44	97.8
AUK12212.1\|3081449_3082763_-\|tail	phage tail protein	Q6H9S9	Enterobacteria_phage	9.7e-78	99.1
AUK14237.1\|3082827_3083451_-	hypothetical protein	A0A1U8QHD6	Enterobacteria_phage	1.9e-68	60.9
AUK12213.1\|3083519_3086996_-\|tail	phage tail protein	Q6H9T2	Enterobacteria_phage	0.0e+00	95.7
AUK12214.1\|3087129_3087657_+	superoxide dismutase	Q9MC02	Salmonella_phage	2.0e-58	59.9
AUK12215.1\|3087687_3087894_-	hypothetical protein	NA	NA	NA	NA
AUK12216.1\|3087847_3088528_-\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	4.1e-112	98.2
AUK12217.1\|3088425_3089169_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	2.3e-145	96.8
AUK12218.1\|3089174_3089873_-\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	3.1e-131	98.7
AUK12219.1\|3089872_3090214_-\|tail	phage tail protein	A0A0P0ZCS8	Stx2-converting_phage	8.7e-63	100.0
AUK12220.1\|3090206_3093449_-\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	98.5
AUK12221.1\|3093576_3094086_-\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	9.4e-13	32.3
AUK12222.1\|3093991_3094198_-	hypothetical protein	NA	NA	NA	NA
AUK12223.1\|3094212_3094494_-\|tail	phage tail protein	A0A0P0ZDE6	Stx2-converting_phage	1.3e-45	100.0
AUK12224.1\|3094517_3094892_-\|tail	phage tail protein	A0A0N7KZA2	Stx2-converting_phage	7.8e-65	100.0
AUK12225.1\|3094897_3095614_-\|tail	phage tail protein	A0A0P0ZD29	Stx2-converting_phage	5.6e-128	98.7
AUK12226.1\|3095680_3096025_-	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
AUK12227.1\|3096021_3096468_-	hypothetical protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
AUK12228.1\|3096464_3096815_-\|head,tail	head-tail adaptor protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
AUK12229.1\|3096824_3097151_-\|head,tail	phage gp6-like head-tail connector protein	B6ETF0	Enterobacteria_phage	7.0e-54	100.0
AUK12230.1\|3099677_3099899_-	hypothetical protein	H6WZL1	Escherichia_phage	5.1e-32	91.8
AUK12231.1\|3099943_3101881_-\|capsid	phage major capsid protein	B6ETE8	Enterobacteria_phage	0.0e+00	98.6
AUK12232.1\|3101944_3103606_-\|terminase	terminase large subunit	A0A0N7KZG0	Stx2-converting_phage	0.0e+00	99.3
AUK12233.1\|3103602_3104166_-\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	2.2e-79	91.4
AUK12234.1\|3104454_3104820_-	HNH endonuclease	B6ETE5	Enterobacteria_phage	1.6e-62	96.7
AUK12235.1\|3104861_3105089_+	DUF3950 domain-containing protein	A0A0P0ZCA1	Stx2-converting_phage	3.9e-35	100.0
AUK12236.1\|3105457_3105682_-	hypothetical protein	NA	NA	NA	NA
AUK12237.1\|3105678_3106173_-\|lysis	lysis protein	Q9ZXB6	Enterobacteria_phage	1.7e-83	100.0
AUK12238.1\|3106471_3107005_-	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.6e-100	95.5
AUK12239.1\|3107055_3107400_-	DUF1327 domain-containing protein	A0A0P0ZD64	Stx2-converting_phage	6.5e-58	98.2
AUK14238.1\|3107404_3107620_-\|holin	holin	Q6H9V8	Enterobacteria_phage	7.7e-33	98.6
AUK12240.1\|3107913_3109764_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	98.5
AUK12241.1\|3110335_3110767_-	tellurite resistance protein	H6WZJ6	Escherichia_phage	2.1e-66	95.8
AUK12242.1\|3111074_3111449_-	XRE family transcriptional regulator	NA	NA	NA	NA
AUK12243.1\|3111509_3111770_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AUK12244.1\|3111877_3112942_-	site-specific DNA-methyltransferase	Q8W637	Enterobacteria_phage	2.6e-190	90.8
AUK12245.1\|3113093_3113291_-	TrmB family transcriptional regulator	Q9MC00	Enterobacteria_phage	2.1e-29	100.0
AUK12246.1\|3113517_3114339_-	antitermination protein	K7P7B9	Enterobacteria_phage	4.1e-82	61.2
AUK12247.1\|3114335_3114710_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	3.2e-34	62.7
3114468:3114488	attL	NA	NA	NA	NA
AUK12248.1\|3114722_3115772_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	9.4e-108	54.0
AUK12249.1\|3115773_3116052_-	hypothetical protein	I6PCV7	Cronobacter_phage	5.7e-12	48.4
AUK12250.1\|3116219_3116432_-	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	7.6e-25	90.0
AUK12251.1\|3116618_3116723_-	hypothetical protein	NA	NA	NA	NA
AUK12252.1\|3116832_3117396_-	hypothetical protein	H6WZG0	Escherichia_phage	2.9e-47	93.9
AUK12253.1\|3117522_3117834_-	hypothetical protein	A0A222YY67	Escherichia_phage	2.4e-51	83.5
AUK12254.1\|3117830_3118019_-	hypothetical protein	A0A291AXE7	Shigella_phage	1.7e-07	45.3
AUK12255.1\|3118015_3118372_-	eae-like protein	A0A222YY85	Escherichia_phage	3.1e-15	65.8
AUK12256.1\|3118368_3118593_-	hypothetical protein	A0A1B5FPG2	Escherichia_phage	3.6e-09	42.3
AUK12257.1\|3118614_3119313_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	4.7e-71	59.1
AUK12258.1\|3119347_3120010_-	replication protein	A0A0U2JGJ0	Escherichia_phage	2.3e-83	95.4
AUK12259.1\|3120696_3120897_+	hypothetical protein	NA	NA	NA	NA
AUK12260.1\|3120907_3121333_-	Rha family transcriptional regulator	NA	NA	NA	NA
AUK12261.1\|3121329_3121557_-	cell division protein	NA	NA	NA	NA
AUK12262.1\|3121651_3122299_+	XRE family transcriptional regulator	A0A1P8DTH0	Proteus_phage	2.9e-06	24.9
AUK12263.1\|3122574_3122727_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	8.7e-07	53.2
AUK12264.1\|3123216_3123405_+	cell division inhibition protein DicB	NA	NA	NA	NA
AUK12265.1\|3123401_3123593_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AUK12266.1\|3123685_3126157_+	exonuclease	K7PLW7	Enterobacteria_phage	1.1e-58	60.7
AUK12267.1\|3126218_3126488_+	excisionase	NA	NA	NA	NA
AUK12268.1\|3126456_3127575_+\|integrase	integrase	Q77Z04	Phage_21	7.7e-84	44.2
AUK12269.1\|3127741_3128536_+	spermidine/putrescine ABC transporter permease	NA	NA	NA	NA
AUK12270.1\|3128532_3129579_+	spermidine/putrescine-binding periplasmic protein	NA	NA	NA	NA
AUK12271.1\|3129636_3130053_+	hypothetical protein	NA	NA	NA	NA
AUK12272.1\|3130134_3130560_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
AUK12273.1\|3130556_3130907_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
AUK12274.1\|3130937_3132551_+\|transposase	IS66 family transposase ISEc23	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
3141038:3141058	attR	NA	NA	NA	NA

DBSCAN-SWA_13

3498541 : 3546109

Enterobacteria_phage(58.62%)

holin,portal,integrase,terminase,head,capsid,lysis,tail

attL 3490918:3490932|attR 3554595:3554609

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3490918:3490932	attL	NA	NA	NA	NA
AUK12609.1\|3498541_3499423_-	T3SS effector protein NleH	A5LH48	Enterobacteria_phage	8.6e-147	90.1
AUK14256.1\|3499591_3499753_-\|tail	phage tail protein	K7PMH7	Enterobacteria_phage	3.9e-13	72.5
AUK12610.1\|3500248_3501241_-	peptidase M85	NA	NA	NA	NA
AUK12611.1\|3501301_3502282_-	non-LEE encoded effector protein NleB	Q8HAB2	Salmonella_phage	2.5e-86	49.5
AUK12612.1\|3502458_3502728_-\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	5.4e-44	97.8
AUK12613.1\|3502729_3504043_-\|tail	phage tail protein	Q6H9S9	Enterobacteria_phage	9.7e-78	99.1
AUK12614.1\|3504107_3504707_-	Ail/Lom family protein	A0A291AWV3	Escherichia_phage	1.7e-109	97.5
AUK12615.1\|3504773_3508172_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	87.8
AUK12616.1\|3508232_3508904_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	2.2e-102	97.8
AUK12617.1\|3508801_3509545_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.9e-147	96.8
AUK12618.1\|3509549_3510248_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.1e-132	98.7
AUK12619.1\|3510247_3510577_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	8.1e-58	98.2
AUK12620.1\|3510573_3513153_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	84.7
AUK12621.1\|3513572_3514004_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.7e-42	68.8
AUK12622.1\|3514017_3514770_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	1.4e-126	93.2
AUK12623.1\|3514777_3515173_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	6.7e-59	83.2
AUK12624.1\|3515169_3515703_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.3e-57	65.6
AUK12625.1\|3515717_3516071_-\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	1.5e-41	69.2
AUK12626.1\|3516063_3516447_-	DNA-packaging protein FI	NA	NA	NA	NA
AUK12627.1\|3516498_3517527_-\|capsid	major capsid protein E	C6ZCY2	Enterobacteria_phage	2.3e-114	61.9
AUK12628.1\|3517584_3517932_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.6e-22	57.0
AUK12629.1\|3517968_3519474_-	scaffolding protein	A0A2I6TC87	Escherichia_phage	9.3e-101	54.5
AUK12630.1\|3519463_3521056_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	2.2e-185	61.1
AUK12631.1\|3521052_3521259_-\|tail	phage tail protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
AUK12632.1\|3521242_3523171_-\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	3.9e-261	65.9
AUK12633.1\|3523142_3523652_-\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
AUK12634.1\|3524046_3524241_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	9.7e-27	96.8
AUK12635.1\|3524320_3524461_+	hypothetical protein	NA	NA	NA	NA
AUK12636.1\|3524428_3525046_-	hypothetical protein	A0A1R3Y613	Salmonella_virus	1.2e-91	85.4
AUK12637.1\|3525195_3525633_-\|lysis	lysis protein	A0A0P0ZBQ9	Stx2-converting_phage	8.5e-71	99.3
AUK12638.1\|3525629_3526127_-	lysozyme	A0A0N7KZA0	Stx2-converting_phage	1.3e-91	99.4
AUK12639.1\|3526126_3526342_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	7.7e-33	98.6
AUK12640.1\|3526340_3526502_+	hypothetical protein	NA	NA	NA	NA
AUK12641.1\|3526780_3528631_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	96.3
AUK12642.1\|3529173_3529890_-	hypothetical protein	NA	NA	NA	NA
AUK12643.1\|3530101_3530791_-	antitermination protein	I6PDF8	Cronobacter_phage	1.5e-58	48.1
AUK12644.1\|3530805_3530928_-	hypothetical protein	NA	NA	NA	NA
AUK12645.1\|3531266_3532226_+	DUF2219 domain-containing protein	NA	NA	NA	NA
AUK12646.1\|3532437_3533103_-	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	4.4e-127	96.4
AUK12647.1\|3533099_3533711_-	recombination protein NinG	Q716C3	Shigella_phage	1.3e-98	99.0
AUK12648.1\|3533703_3533874_-	protein ninF	Q8H9Z5	Enterobacteria_phage	1.2e-25	98.2
AUK12649.1\|3533870_3534053_-	NinE family protein	Q8H9Z6	Enterobacteria_phage	1.9e-29	100.0
AUK12650.1\|3534049_3534577_-	phage N-6-adenine-methyltransferase	Q8H9Z7	Enterobacteria_phage	3.6e-100	99.4
AUK12651.1\|3534573_3535032_-	recombination protein NinB	Q8H9Z8	Enterobacteria_phage	4.3e-81	100.0
AUK12652.1\|3535087_3535378_-	protein ren	O48423	Enterobacteria_phage	9.6e-47	100.0
AUK12653.1\|3535374_3536076_-	Replication protein P	K7P6G2	Enterobacteria_phage	3.8e-129	99.6
AUK12654.1\|3536072_3536972_-	Replication protein O	M1FN81	Enterobacteria_phage	1.4e-173	99.3
AUK12655.1\|3537006_3537285_-	hypothetical protein	K7P7A2	Enterobacteria_phage	1.6e-43	100.0
AUK12656.1\|3537393_3537579_-	hypothetical protein	A5VW97	Enterobacteria_phage	1.6e-26	100.0
AUK12657.1\|3537659_3538310_+	LexA family transcriptional repressor	K7PM82	Enterobacteria_phage	4.1e-122	98.6
AUK12658.1\|3538623_3538896_+	hypothetical protein	K7PH69	Enterobacterial_phage	1.1e-25	95.6
AUK12659.1\|3538954_3539425_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	3.7e-88	100.0
AUK12660.1\|3539575_3539944_+	DUF2528 domain-containing protein	M1FPD2	Enterobacteria_phage	2.2e-64	98.4
AUK12661.1\|3540023_3540293_+	host cell division inhibitory peptide Kil	M1FN78	Enterobacteria_phage	3.0e-42	98.9
AUK12662.1\|3540247_3540400_+	host-nuclease inhibitor protein Gam	Q08J51	Stx2-converting_phage	5.8e-19	94.0
AUK12663.1\|3540368_3540665_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
AUK12664.1\|3540670_3541456_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
AUK12665.1\|3541452_3542133_+	exonuclease	A0A0N6WET1	Escherichia_phage	2.5e-130	97.8
AUK12666.1\|3542129_3542288_+	DUF1317 domain-containing protein	M1FJ61	Enterobacteria_phage	4.0e-23	98.1
AUK12667.1\|3542284_3543037_+	hypothetical protein	M1FN76	Enterobacteria_phage	1.9e-150	99.6
AUK12668.1\|3543044_3543260_+	cell division protein ZapA	M1FPM2	Enterobacteria_phage	8.5e-32	97.2
AUK12669.1\|3543358_3543580_+	conjugal transfer protein TraR	A0A0K2FI84	Escherichia_phage	2.9e-35	100.0
AUK12670.1\|3543790_3544321_-	hypothetical protein	NA	NA	NA	NA
AUK12671.1\|3544211_3544463_-	hypothetical protein	NA	NA	NA	NA
AUK12672.1\|3544517_3544703_-	hypothetical protein	NA	NA	NA	NA
AUK12673.1\|3544635_3544803_+	hypothetical protein	A5VWB7	Enterobacteria_phage	2.9e-27	98.2
AUK12674.1\|3544842_3545061_+	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
AUK12675.1\|3545038_3546109_+\|integrase	integrase	Q9MCR4	Enterobacteria_phage	5.1e-202	100.0
3554595:3554609	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP024137

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP024136

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP024134

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection