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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP024158 Escherichia coli strain 14EC047 plasmid p14EC047c, complete sequence 0 crisprs NA 0 0 4 0
CP024155 Escherichia coli strain 14EC047 chromosome, complete genome 5 crisprs csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas3,DEDDh,c2c9_V-U4,DinG,RT 0 19 13 0
CP024156 Escherichia coli strain 14EC047 plasmid p14EC047a, complete sequence 0 crisprs NA 0 0 0 0
CP024157 Escherichia coli strain 14EC047 plasmid p14EC047b, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. CP024158
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 69875 48 Escherichia_phage(29.41%) integrase,protease,transposase attL 10936:10954|attR 84402:84420
DBSCAN-SWA_2 81024 : 86212 7 Stx2-converting_phage(66.67%) NA NA
DBSCAN-SWA_3 97148 : 98474 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_4 102024 : 103238 1 Enterobacteria_phage(100.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP024155
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP024155_1 656053-656170 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP024155_2 1063901-1064294 Orphan I-E
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP024155_3 1089840-1090659 TypeI-E I-E
13 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP024155_4 2607354-2607463 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP024155_6 4228667-4228799 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP024155_3 3.7|1090248|32|CP024155|PILER-CR 1090248-1090279 32 NZ_CP042584 Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence 74762-74793 0 1.0
CP024155_3 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT 1090233-1090264 32 NZ_CP042584 Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence 74762-74793 0 1.0
CP024155_5 5.1|3191303|40|CP024155|CRISPRCasFinder 3191303-3191342 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
CP024155_6 6.1|4228684|42|CP024155|PILER-CR 4228684-4228725 42 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141085-141126 0 1.0
CP024155_3 3.19|1090599|32|CP024155|CRISPRCasFinder,CRT 1090599-1090630 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246937-246968 1 0.969
CP024155_6 6.2|4228743|40|CP024155|PILER-CR 4228743-4228782 40 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141028-141067 1 0.975
CP024155_2 2.2|1063990|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1063990-1064022 33 NZ_LR134258 Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence 3574-3606 4 0.879
CP024155_2 2.2|1063990|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1063990-1064022 33 LR134281 Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6 3567-3599 4 0.879
CP024155_2 2.2|1063990|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1063990-1064022 33 KY271401 Klebsiella phage 1 LV-2017, complete genome 21043-21075 4 0.879
CP024155_3 3.15|1090355|32|CP024155|CRISPRCasFinder,CRT 1090355-1090386 32 MF547662 Clostridioides phage LIBA6276, complete genome 37369-37400 4 0.875
CP024155_3 3.15|1090355|32|CP024155|CRISPRCasFinder,CRT 1090355-1090386 32 MF547663 Clostridioides phage LIBA2945, complete genome 37369-37400 4 0.875
CP024155_3 3.7|1090248|32|CP024155|PILER-CR 1090248-1090279 32 NC_014108 Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence 6021-6052 5 0.844
CP024155_3 3.7|1090248|32|CP024155|PILER-CR 1090248-1090279 32 NZ_CP030922 Escherichia coli strain KL53 plasmid pKL53-S, complete sequence 5379-5410 5 0.844
CP024155_3 3.7|1090248|32|CP024155|PILER-CR 1090248-1090279 32 NZ_CP038659 Citrobacter freundii strain 680 plasmid p680_1, complete sequence 372822-372853 5 0.844
CP024155_3 3.7|1090248|32|CP024155|PILER-CR 1090248-1090279 32 MN699848 Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence 37054-37085 5 0.844
CP024155_3 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT 1090233-1090264 32 NC_014108 Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence 6021-6052 5 0.844
CP024155_3 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT 1090233-1090264 32 NZ_CP030922 Escherichia coli strain KL53 plasmid pKL53-S, complete sequence 5379-5410 5 0.844
CP024155_3 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT 1090233-1090264 32 NZ_CP038659 Citrobacter freundii strain 680 plasmid p680_1, complete sequence 372822-372853 5 0.844
CP024155_3 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT 1090233-1090264 32 MN699848 Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence 37054-37085 5 0.844
CP024155_3 3.15|1090355|32|CP024155|CRISPRCasFinder,CRT 1090355-1090386 32 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 83504-83535 5 0.844
CP024155_2 2.2|1063990|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1063990-1064022 33 KY653119 Morganella phage IME1369_02, complete genome 18216-18248 6 0.818
CP024155_3 3.4|1090057|32|CP024155|PILER-CR 1090057-1090088 32 NZ_AP018520 Sphingobium sp. YG1 plasmid pYGP1, complete sequence 43472-43503 6 0.812
CP024155_3 3.10|1090051|32|CP024155|CRISPRCasFinder 1090051-1090082 32 NZ_AP018520 Sphingobium sp. YG1 plasmid pYGP1, complete sequence 43472-43503 6 0.812
CP024155_3 3.21|1090052|31|CP024155|CRT 1090052-1090082 31 NZ_AP018520 Sphingobium sp. YG1 plasmid pYGP1, complete sequence 43472-43502 6 0.806
CP024155_3 3.19|1090599|32|CP024155|CRISPRCasFinder,CRT 1090599-1090630 32 MK455769 Aeromonas phage MJG, complete genome 10369-10400 7 0.781
CP024155_2 2.3|1064051|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1064051-1064083 33 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 755172-755204 8 0.758
CP024155_3 3.9|1089991|31|CP024155|CRISPRCasFinder 1089991-1090021 31 NC_018454 Cronobacter phage phiES15, complete genome 8781-8811 8 0.742
CP024155_3 3.9|1089991|31|CP024155|CRISPRCasFinder 1089991-1090021 31 JQ780327 Cronobacter phage phiES15, complete sequence 8781-8811 8 0.742
CP024155_3 3.20|1089991|32|CP024155|CRT 1089991-1090022 32 NC_018454 Cronobacter phage phiES15, complete genome 8781-8812 8 0.75
CP024155_3 3.20|1089991|32|CP024155|CRT 1089991-1090022 32 JQ780327 Cronobacter phage phiES15, complete sequence 8781-8812 8 0.75
CP024155_3 3.5|1090118|32|CP024155|PILER-CR 1090118-1090149 32 NZ_CP009595 Bacillus cereus strain 3a plasmid pBFC_3, complete sequence 298003-298034 9 0.719
CP024155_3 3.5|1090118|32|CP024155|PILER-CR 1090118-1090149 32 NZ_CP009606 Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence 164238-164269 9 0.719
CP024155_3 3.5|1090118|32|CP024155|PILER-CR 1090118-1090149 32 NZ_CP053994 Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence 238009-238040 9 0.719
CP024155_3 3.5|1090118|32|CP024155|PILER-CR 1090118-1090149 32 NZ_CP053992 Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence 221025-221056 9 0.719
CP024155_3 3.7|1090248|32|CP024155|PILER-CR 1090248-1090279 32 NZ_CP045296 Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence 238917-238948 9 0.719
CP024155_3 3.11|1090112|32|CP024155|CRISPRCasFinder,CRT 1090112-1090143 32 NZ_CP009595 Bacillus cereus strain 3a plasmid pBFC_3, complete sequence 298003-298034 9 0.719
CP024155_3 3.11|1090112|32|CP024155|CRISPRCasFinder,CRT 1090112-1090143 32 NZ_CP009606 Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence 164238-164269 9 0.719
CP024155_3 3.11|1090112|32|CP024155|CRISPRCasFinder,CRT 1090112-1090143 32 NZ_CP053994 Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence 238009-238040 9 0.719
CP024155_3 3.11|1090112|32|CP024155|CRISPRCasFinder,CRT 1090112-1090143 32 NZ_CP053992 Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence 221025-221056 9 0.719
CP024155_3 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT 1090233-1090264 32 NZ_CP045296 Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence 238917-238948 9 0.719
CP024155_3 3.15|1090355|32|CP024155|CRISPRCasFinder,CRT 1090355-1090386 32 MN693584 Marine virus AFVG_25M163, complete genome 29591-29622 9 0.719
CP024155_3 3.15|1090355|32|CP024155|CRISPRCasFinder,CRT 1090355-1090386 32 MN103543 Pseudomonas phage vB_PaeM_PS119XW, complete genome 258501-258532 9 0.719
CP024155_3 3.15|1090355|32|CP024155|CRISPRCasFinder,CRT 1090355-1090386 32 MK599315 Pseudomonas phage PA1C, complete genome 257887-257918 9 0.719
CP024155_3 3.19|1090599|32|CP024155|CRISPRCasFinder,CRT 1090599-1090630 32 NC_047954 Pseudomonas phage Njord, complete genome 11435-11466 9 0.719
CP024155_3 3.21|1090052|31|CP024155|CRT 1090052-1090082 31 NZ_CP021914 Sagittula sp. P11 plasmid unnamed1, complete sequence 50200-50230 9 0.71
CP024155_3 3.2|1089930|32|CP024155|PILER-CR,CRISPRCasFinder,CRT 1089930-1089961 32 NZ_CP027239 Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence 55281-55312 10 0.688
CP024155_3 3.4|1090057|32|CP024155|PILER-CR 1090057-1090088 32 NZ_CP021914 Sagittula sp. P11 plasmid unnamed1, complete sequence 50199-50230 10 0.688
CP024155_3 3.7|1090248|32|CP024155|PILER-CR 1090248-1090279 32 LR134122 Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2 259269-259300 10 0.688
CP024155_3 3.10|1090051|32|CP024155|CRISPRCasFinder 1090051-1090082 32 NZ_CP021914 Sagittula sp. P11 plasmid unnamed1, complete sequence 50199-50230 10 0.688
CP024155_3 3.12|1090173|31|CP024155|CRISPRCasFinder,CRT 1090173-1090203 31 MT344105 Acinetobacter phage fLi-Aba03, complete genome 32700-32730 10 0.677
CP024155_3 3.12|1090173|31|CP024155|CRISPRCasFinder,CRT 1090173-1090203 31 MT344104 Acinetobacter phage fLi-Aba02, complete genome 32862-32892 10 0.677
CP024155_3 3.12|1090173|31|CP024155|CRISPRCasFinder,CRT 1090173-1090203 31 MT344103 Acinetobacter phage fEg-Aba01, complete genome 31615-31645 10 0.677
CP024155_3 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT 1090233-1090264 32 LR134122 Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2 259269-259300 10 0.688
CP024155_3 3.19|1090599|32|CP024155|CRISPRCasFinder,CRT 1090599-1090630 32 NC_047894 Pseudomonas phage uligo, complete genome 11353-11384 10 0.688
CP024155_2 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1063929-1063961 33 MN694016 Marine virus AFVG_250M811, complete genome 5413-5445 11 0.667
CP024155_2 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1063929-1063961 33 MN694190 Marine virus AFVG_250M608, complete genome 5350-5382 11 0.667
CP024155_2 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1063929-1063961 33 MN693920 Marine virus AFVG_250M810, complete genome 5422-5454 11 0.667
CP024155_2 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1063929-1063961 33 MN693800 Marine virus AFVG_250M813, complete genome 5404-5436 11 0.667
CP024155_2 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1063929-1063961 33 MN694554 Marine virus AFVG_250M812, complete genome 5416-5448 11 0.667
CP024155_2 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1063929-1063961 33 MN694404 Marine virus AFVG_250M623, complete genome 5369-5401 11 0.667
CP024155_2 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1063929-1063961 33 MN694355 Marine virus AFVG_250M627, complete genome 26039-26071 11 0.667
CP024155_2 2.2|1063990|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1063990-1064022 33 MF158039 Shigella phage Sf12, complete genome 4974-5006 11 0.667
CP024155_2 2.2|1063990|33|CP024155|PILER-CR,CRISPRCasFinder,CRT 1063990-1064022 33 MF158042 Shigella phage Sd1, complete genome 937-969 11 0.667

1. spacer 3.7|1090248|32|CP024155|PILER-CR matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 0, identity: 1.0

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggggaaaacgaacaatctgttt	Protospacer
********************************

2. spacer 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 0, identity: 1.0

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggggaaaacgaacaatctgttt	Protospacer
********************************

3. spacer 5.1|3191303|40|CP024155|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

4. spacer 6.1|4228684|42|CP024155|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 0, identity: 1.0

tgtcacacgcagataaatccaactttcaatattgttaagttc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
******************************************

5. spacer 3.19|1090599|32|CP024155|CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 1, identity: 0.969

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
***********************.********

6. spacer 6.2|4228743|40|CP024155|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.975

catggcgtagcaaaaagaaattttcaatattgctttatgg	CRISPR spacer
catggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
********** *****************************

7. spacer 2.2|1063990|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

8. spacer 2.2|1063990|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

9. spacer 2.2|1063990|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

10. spacer 3.15|1090355|32|CP024155|CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 4, identity: 0.875

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cttataaaa	Protospacer
*** ******************* .***** * 

11. spacer 3.15|1090355|32|CP024155|CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 4, identity: 0.875

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cttataaaa	Protospacer
*** ******************* .***** * 

12. spacer 3.7|1090248|32|CP024155|PILER-CR matches to NC_014108 (Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

13. spacer 3.7|1090248|32|CP024155|PILER-CR matches to NZ_CP030922 (Escherichia coli strain KL53 plasmid pKL53-S, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

14. spacer 3.7|1090248|32|CP024155|PILER-CR matches to NZ_CP038659 (Citrobacter freundii strain 680 plasmid p680_1, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

15. spacer 3.7|1090248|32|CP024155|PILER-CR matches to MN699848 (Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

16. spacer 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT matches to NC_014108 (Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

17. spacer 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT matches to NZ_CP030922 (Escherichia coli strain KL53 plasmid pKL53-S, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

18. spacer 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT matches to NZ_CP038659 (Citrobacter freundii strain 680 plasmid p680_1, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

19. spacer 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT matches to MN699848 (Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

20. spacer 3.15|1090355|32|CP024155|CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cctataaaa	Protospacer
*** ******************* ..**** * 

21. spacer 2.2|1063990|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
aggttgtgcggcgttaacgctgaccagcatttc	Protospacer
 *  * ******.******** ***********

22. spacer 3.4|1090057|32|CP024155|PILER-CR matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 6, identity: 0.812

ggcgagtccgtcagcggtgcgccgctg-caaca	CRISPR spacer
gtcgagtaagtcagcggtgcgccgcgatcaac-	Protospacer
* *****  **************** . **** 

23. spacer 3.10|1090051|32|CP024155|CRISPRCasFinder matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 6, identity: 0.812

ggcgagtccgtcagcggtgcgccgctg-caaca	CRISPR spacer
gtcgagtaagtcagcggtgcgccgcgatcaac-	Protospacer
* *****  **************** . **** 

24. spacer 3.21|1090052|31|CP024155|CRT matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 6, identity: 0.806

gcgagtccgtcagcggtgcgccgctg-caaca	CRISPR spacer
tcgagtaagtcagcggtgcgccgcgatcaac-	Protospacer
 *****  **************** . **** 

25. spacer 3.19|1090599|32|CP024155|CRISPRCasFinder,CRT matches to MK455769 (Aeromonas phage MJG, complete genome) position: , mismatch: 7, identity: 0.781

gacgcactggatgcgatgatggatatcacttg-	CRISPR spacer
gacgcactgtatgcaatgatgga-atcggaggc	Protospacer
********* ****.******** ***.   * 

26. spacer 2.3|1064051|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

gacgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
tccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
  *******.**************** *.. *.

27. spacer 3.9|1089991|31|CP024155|CRISPRCasFinder matches to NC_018454 (Cronobacter phage phiES15, complete genome) position: , mismatch: 8, identity: 0.742

atccgccgccggttaacgctggaccagttcc	CRISPR spacer
gcgtggccccggttaacgctggacacgttcc	Protospacer
.. .* * ****************  *****

28. spacer 3.9|1089991|31|CP024155|CRISPRCasFinder matches to JQ780327 (Cronobacter phage phiES15, complete sequence) position: , mismatch: 8, identity: 0.742

atccgccgccggttaacgctggaccagttcc	CRISPR spacer
gcgtggccccggttaacgctggacacgttcc	Protospacer
.. .* * ****************  *****

29. spacer 3.20|1089991|32|CP024155|CRT matches to NC_018454 (Cronobacter phage phiES15, complete genome) position: , mismatch: 8, identity: 0.75

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

30. spacer 3.20|1089991|32|CP024155|CRT matches to JQ780327 (Cronobacter phage phiES15, complete sequence) position: , mismatch: 8, identity: 0.75

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

31. spacer 3.5|1090118|32|CP024155|PILER-CR matches to NZ_CP009595 (Bacillus cereus strain 3a plasmid pBFC_3, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  ************** 

32. spacer 3.5|1090118|32|CP024155|PILER-CR matches to NZ_CP009606 (Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  ************** 

33. spacer 3.5|1090118|32|CP024155|PILER-CR matches to NZ_CP053994 (Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  ************** 

34. spacer 3.5|1090118|32|CP024155|PILER-CR matches to NZ_CP053992 (Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  ************** 

35. spacer 3.7|1090248|32|CP024155|PILER-CR matches to NZ_CP045296 (Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tctgctgcatgggggaaacgatcaatctgttg	Protospacer
**    ..******.****** ********* 

36. spacer 3.11|1090112|32|CP024155|CRISPRCasFinder,CRT matches to NZ_CP009595 (Bacillus cereus strain 3a plasmid pBFC_3, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  ************** 

37. spacer 3.11|1090112|32|CP024155|CRISPRCasFinder,CRT matches to NZ_CP009606 (Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  ************** 

38. spacer 3.11|1090112|32|CP024155|CRISPRCasFinder,CRT matches to NZ_CP053994 (Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  ************** 

39. spacer 3.11|1090112|32|CP024155|CRISPRCasFinder,CRT matches to NZ_CP053992 (Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  ************** 

40. spacer 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT matches to NZ_CP045296 (Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tctgctgcatgggggaaacgatcaatctgttg	Protospacer
**    ..******.****** ********* 

41. spacer 3.15|1090355|32|CP024155|CRISPRCasFinder,CRT matches to MN693584 (Marine virus AFVG_25M163, complete genome) position: , mismatch: 9, identity: 0.719

tacagtttccataaattcacctcgtttatata	CRISPR spacer
ggggatatctataaactcacctcgtttatatt	Protospacer
 . ..* **.*****.*************** 

42. spacer 3.15|1090355|32|CP024155|CRISPRCasFinder,CRT matches to MN103543 (Pseudomonas phage vB_PaeM_PS119XW, complete genome) position: , mismatch: 9, identity: 0.719

tacagtttccataaattcacctcgtttatata	CRISPR spacer
cgcttcttccatacattcacctcggttatgga	Protospacer
..*  .******* ********** ****. *

43. spacer 3.15|1090355|32|CP024155|CRISPRCasFinder,CRT matches to MK599315 (Pseudomonas phage PA1C, complete genome) position: , mismatch: 9, identity: 0.719

tacagtttccataaattcacctcgtttatata	CRISPR spacer
cgcttcttccatacattcacctcggttatgga	Protospacer
..*  .******* ********** ****. *

44. spacer 3.19|1090599|32|CP024155|CRISPRCasFinder,CRT matches to NC_047954 (Pseudomonas phage Njord, complete genome) position: , mismatch: 9, identity: 0.719

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggccgaggc	Protospacer
******** ************** ..*.    

45. spacer 3.21|1090052|31|CP024155|CRT matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

gcgagtccgtcagcggtgcgccgctgcaaca	CRISPR spacer
tggagtccgacatcggtgcgccgcttttcga	Protospacer
  ******* ** ************ .   *

46. spacer 3.2|1089930|32|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027239 (Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcacggaattgttatgctgttcccctgaccg	CRISPR spacer
tcttcggaattgccatgctgttccccttccat	Protospacer
  . ********..*************  *  

47. spacer 3.4|1090057|32|CP024155|PILER-CR matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcgagtccgtcagcggtgcgccgctgcaaca	CRISPR spacer
ttggagtccgacatcggtgcgccgcttttcga	Protospacer
   ******* ** ************ .   *

48. spacer 3.7|1090248|32|CP024155|PILER-CR matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
agctgaatatggggaaaatgcacaatatcccc	Protospacer
   ***************.* ***** * ...

49. spacer 3.10|1090051|32|CP024155|CRISPRCasFinder matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcgagtccgtcagcggtgcgccgctgcaaca	CRISPR spacer
ttggagtccgacatcggtgcgccgcttttcga	Protospacer
   ******* ** ************ .   *

50. spacer 3.12|1090173|31|CP024155|CRISPRCasFinder,CRT matches to MT344105 (Acinetobacter phage fLi-Aba03, complete genome) position: , mismatch: 10, identity: 0.677

tttcatcaaagcattaagggatggaataaag	CRISPR spacer
tttcatcaaagtattaatggatgatggttca	Protospacer
***********.***** *****. .    .

51. spacer 3.12|1090173|31|CP024155|CRISPRCasFinder,CRT matches to MT344104 (Acinetobacter phage fLi-Aba02, complete genome) position: , mismatch: 10, identity: 0.677

tttcatcaaagcattaagggatggaataaag	CRISPR spacer
tttcatcaaagtattaatggatgatggttca	Protospacer
***********.***** *****. .    .

52. spacer 3.12|1090173|31|CP024155|CRISPRCasFinder,CRT matches to MT344103 (Acinetobacter phage fEg-Aba01, complete genome) position: , mismatch: 10, identity: 0.677

tttcatcaaagcattaagggatggaataaag	CRISPR spacer
tttcatcaaagtattaatggatgatggttca	Protospacer
***********.***** *****. .    .

53. spacer 3.13|1090233|32|CP024155|CRISPRCasFinder,CRT matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
agctgaatatggggaaaatgcacaatatcccc	Protospacer
   ***************.* ***** * ...

54. spacer 3.19|1090599|32|CP024155|CRISPRCasFinder,CRT matches to NC_047894 (Pseudomonas phage uligo, complete genome) position: , mismatch: 10, identity: 0.688

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggcagaagc	Protospacer
******** ************** .. .    

55. spacer 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to MN694016 (Marine virus AFVG_250M811, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.   

56. spacer 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to MN694190 (Marine virus AFVG_250M608, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatacct	Protospacer
 .  .*********.***********.**.   

57. spacer 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to MN693920 (Marine virus AFVG_250M810, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.   

58. spacer 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to MN693800 (Marine virus AFVG_250M813, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.   

59. spacer 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to MN694554 (Marine virus AFVG_250M812, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.   

60. spacer 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to MN694404 (Marine virus AFVG_250M623, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatacct	Protospacer
 .  .*********.***********.**.   

61. spacer 2.1|1063929|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to MN694355 (Marine virus AFVG_250M627, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.   

62. spacer 2.2|1063990|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   .. 

63. spacer 2.2|1063990|33|CP024155|PILER-CR,CRISPRCasFinder,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   .. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 260049 : 265828 7 Stx2-converting_phage(50.0%) transposase NA
DBSCAN-SWA_2 1098023 : 1111983 12 Escherichia_phage(40.0%) NA NA
DBSCAN-SWA_3 1455389 : 1568464 130 Enterobacteria_phage(62.5%) coat,terminase,capsid,transposase,head,tail,tRNA,integrase,plate,holin,portal,lysis attL 1526327:1526350|attR 1572280:1572303
DBSCAN-SWA_4 1773784 : 1796919 41 Enterobacteria_phage(28.21%) integrase attL 1776259:1776279|attR 1804801:1804821
DBSCAN-SWA_5 1800483 : 1808510 11 Enterobacteria_phage(60.0%) transposase,holin,lysis NA
DBSCAN-SWA_6 1902745 : 1913091 11 Enterobacteria_phage(33.33%) transposase NA
DBSCAN-SWA_7 1966227 : 2089458 110 Escherichia_phage(26.42%) terminase,capsid,transposase,head,tail,tRNA,integrase,portal,holin,lysis attL 2016127:2016148|attR 2065850:2065871
DBSCAN-SWA_8 2192637 : 2261698 74 Enterobacteria_phage(34.78%) terminase,capsid,transposase,head,tail,integrase,portal,protease,holin,lysis attL 2192452:2192498|attR 2247886:2247932
DBSCAN-SWA_9 2546538 : 2602906 73 Enterobacteria_phage(36.0%) terminase,capsid,head,transposase,tail,integrase,portal,lysis attL 2567020:2567035|attR 2606242:2606257
DBSCAN-SWA_10 2857815 : 2955831 112 Enterobacteria_phage(38.98%) capsid,head,tail,tRNA,integrase,protease,holin,portal attL 2877688:2877703|attR 2951522:2951537
DBSCAN-SWA_11 3036943 : 3088301 56 Stx2-converting_phage(29.27%) terminase,transposase,head,tail,integrase,lysis attL 3070220:3070240|attR 3096791:3096811
DBSCAN-SWA_12 3453934 : 3500468 62 Enterobacteria_phage(58.82%) terminase,capsid,head,tail,integrase,holin,portal,lysis attL 3467376:3467391|attR 3511013:3511028
DBSCAN-SWA_13 4363615 : 4411094 31 Enterobacteria_phage(41.67%) transposase,integrase attL 4377856:4377872|attR 4419535:4419551
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP024157
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 35327 : 63324 28 Salmonella_phage(40.0%) protease,integrase,transposase attL 40092:40106|attR 63374:63388
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage