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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025252 Escherichia coli strain BH100 plasmid pApR, complete sequence 0 crisprs NA 0 0 0 0
CP025251 Escherichia coli strain BH100 chromosome, complete genome 8 crisprs cas14j,DinG,cas3,DEDDh,csa3,RT,PD-DExK,WYL 2 8 9 0
CP025253 Escherichia coli strain BH100 plasmid pBH100-1, complete sequence 0 crisprs csa3 0 0 1 0

Results visualization

1. CP025251
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025251_1 155302-155389 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025251_2 981387-981534 Orphan I-F
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025251_3 2452509-2452622 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025251_4 2530514-2530657 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025251_5 4341807-4342008 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025251_6 4402435-4402561 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025251_7 4623506-4623634 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025251_8 4858995-4859134 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 CP025251.1 2530749-2530786 1 0.974
CP025251_1 1.1|155329|34|CP025251|CRISPRCasFinder 155329-155362 34 CP025251.1 156826-156859 2 0.941

1. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to position: 2530749-2530786, mismatch: 1, identity: 0.974

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccgacctacggctctacccctg	Protospacer
***************************.**********

2. spacer 1.1|155329|34|CP025251|CRISPRCasFinder matches to position: 156826-156859, mismatch: 2, identity: 0.941

gccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
gccgcatccggcatgaacaaatcgcacgttgtca	Protospacer
*************.******* ************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP025251_7 7.1|4623544|53|CP025251|CRISPRCasFinder 4623544-4623596 53 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14191-14243 0 1.0
CP025251_1 1.1|155329|34|CP025251|CRISPRCasFinder 155329-155362 34 NZ_CP053721 Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence 198894-198927 2 0.941
CP025251_1 1.1|155329|34|CP025251|CRISPRCasFinder 155329-155362 34 NZ_CP044299 Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence 91403-91436 2 0.941
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 MT230402 Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence 271-327 5 0.912
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 119-156 6 0.842
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 14032-14069 7 0.816
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 14231-14268 7 0.816
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 MG065691 UNVERIFIED: Campylobacter phage A11a, complete genome 33075-33112 7 0.816
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 MG065686 UNVERIFIED: Campylobacter phage A18a, complete genome 141011-141048 7 0.816
CP025251_7 7.1|4623544|53|CP025251|CRISPRCasFinder 4623544-4623596 53 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31294-31346 7 0.868
CP025251_1 1.1|155329|34|CP025251|CRISPRCasFinder 155329-155362 34 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 215407-215440 8 0.765
CP025251_1 1.1|155329|34|CP025251|CRISPRCasFinder 155329-155362 34 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 225901-225934 8 0.765
CP025251_1 1.1|155329|34|CP025251|CRISPRCasFinder 155329-155362 34 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 216735-216768 8 0.765
CP025251_1 1.1|155329|34|CP025251|CRISPRCasFinder 155329-155362 34 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 197690-197723 8 0.765
CP025251_2 2.2|981475|32|CP025251|CRISPRCasFinder 981475-981506 32 NC_015163 Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence 83332-83363 8 0.75
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 115800-115837 8 0.789
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 170854-170891 8 0.789
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_AP023209 Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence 45-82 8 0.789
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4160-4197 8 0.789
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229099-229136 8 0.789
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4159-4196 8 0.789
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239593-239630 8 0.789
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4159-4196 8 0.789
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230505-230542 8 0.789
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4159-4196 8 0.789
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211475-211512 8 0.789
CP025251_7 7.1|4623544|53|CP025251|CRISPRCasFinder 4623544-4623596 53 NZ_CP053046 Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence 58261-58313 8 0.849
CP025251_1 1.1|155329|34|CP025251|CRISPRCasFinder 155329-155362 34 NZ_CP010730 Phaeobacter inhibens strain P88 plasmid pP88_e, complete sequence 13023-13056 9 0.735
CP025251_1 1.1|155329|34|CP025251|CRISPRCasFinder 155329-155362 34 NZ_CP010640 Phaeobacter gallaeciensis strain P73 plasmid pP73_d, complete sequence 13023-13056 9 0.735
CP025251_1 1.1|155329|34|CP025251|CRISPRCasFinder 155329-155362 34 NC_023141 Phaeobacter gallaeciensis DSM 26640 plasmid pGal_E78, complete sequence 66426-66459 9 0.735
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7437-7474 9 0.763
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84261-84298 9 0.763
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 40397-40434 9 0.763
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 208927-208964 9 0.763
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 219421-219458 9 0.763
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 210255-210292 9 0.763
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 191210-191247 9 0.763
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27298-27335 9 0.763
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 LR134125 Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5 424300-424337 9 0.763
CP025251_5 5.2|4341942|56|CP025251|PILER-CR 4341942-4341997 56 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 13988-14043 9 0.839
CP025251_7 7.1|4623544|53|CP025251|CRISPRCasFinder 4623544-4623596 53 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 137974-138026 9 0.83
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_AP023209 Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence 19384-19421 10 0.737
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229200-229237 10 0.737
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229301-229338 10 0.737
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239694-239731 10 0.737
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239795-239832 10 0.737
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230606-230643 10 0.737
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230707-230744 10 0.737
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211576-211613 10 0.737
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211677-211714 10 0.737
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27397-27434 10 0.737
CP025251_7 7.1|4623544|53|CP025251|CRISPRCasFinder 4623544-4623596 53 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 12154-12206 10 0.811
CP025251_1 1.1|155329|34|CP025251|CRISPRCasFinder 155329-155362 34 AP018698 Arthrobacter sp. MN05-02 plasmid plasmid1 DNA, complete genome 10214-10247 11 0.676
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229402-229439 11 0.711
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239896-239933 11 0.711
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230808-230845 11 0.711
CP025251_4 4.1|2530567|38|CP025251|CRISPRCasFinder 2530567-2530604 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211778-211815 11 0.711
CP025251_5 5.2|4341942|56|CP025251|PILER-CR 4341942-4341997 56 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87116-87171 11 0.804
CP025251_8 8.1|4859039|52|CP025251|CRISPRCasFinder 4859039-4859090 52 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 12113-12164 11 0.788
CP025251_8 8.1|4859039|52|CP025251|CRISPRCasFinder 4859039-4859090 52 MT230402 Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence 272-323 11 0.788
CP025251_8 8.1|4859039|52|CP025251|CRISPRCasFinder 4859039-4859090 52 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31252-31303 11 0.788
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 30155-30211 12 0.789
CP025251_7 7.1|4623544|53|CP025251|CRISPRCasFinder 4623544-4623596 53 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 8883-8935 12 0.774
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 43-99 13 0.772
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 42-98 13 0.772
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 18328-18384 13 0.772
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 42-98 13 0.772
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 42-98 13 0.772
CP025251_7 7.1|4623544|53|CP025251|CRISPRCasFinder 4623544-4623596 53 MT230112 Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence 89-141 13 0.755
CP025251_7 7.1|4623544|53|CP025251|CRISPRCasFinder 4623544-4623596 53 NC_049343 Escherichia phage 500465-2, complete genome 31798-31850 13 0.755
CP025251_8 8.1|4859039|52|CP025251|CRISPRCasFinder 4859039-4859090 52 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 208982-209033 13 0.75
CP025251_8 8.1|4859039|52|CP025251|CRISPRCasFinder 4859039-4859090 52 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 219476-219527 13 0.75
CP025251_8 8.1|4859039|52|CP025251|CRISPRCasFinder 4859039-4859090 52 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 210310-210361 13 0.75
CP025251_8 8.1|4859039|52|CP025251|CRISPRCasFinder 4859039-4859090 52 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 191265-191316 13 0.75
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87115-87171 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229227-229283 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229328-229384 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229429-229485 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4114-4170 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239721-239777 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239822-239878 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239923-239979 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4113-4169 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230633-230689 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230734-230790 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230835-230891 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4113-4169 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211603-211659 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211704-211760 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211805-211861 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4113-4169 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7392-7448 14 0.754
CP025251_6 6.1|4402470|57|CP025251|CRISPRCasFinder 4402470-4402526 57 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84216-84272 14 0.754
CP025251_7 7.1|4623544|53|CP025251|CRISPRCasFinder 4623544-4623596 53 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 397089-397141 14 0.736
CP025251_5 5.1|4341843|63|CP025251|PILER-CR 4341843-4341905 63 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87115-87177 15 0.762

1. spacer 7.1|4623544|53|CP025251|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 0, identity: 1.0

gccgttgccgaatgtaggccggataaggcgttcacgccgcatccggcaaccag	CRISPR spacer
gccgttgccgaatgtaggccggataaggcgttcacgccgcatccggcaaccag	Protospacer
*****************************************************

2. spacer 1.1|155329|34|CP025251|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 2, identity: 0.941

gccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
gccgcatccggcatgaacaacgcgcacgttgtca	Protospacer
*************.****** *************

3. spacer 1.1|155329|34|CP025251|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 2, identity: 0.941

gccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
gccgcatccggcatgaacaacgcgcacgttgtca	Protospacer
*************.****** *************

4. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 5, identity: 0.912

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctac-aactattgccgacct	CRISPR spacer
atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaaaccgttaccgact-	Protospacer
****************************************** ***..**.*****. 

5. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 6, identity: 0.842

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccgtcctacggttctgtgctcg	Protospacer
******************* ***********.. *..*

6. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 7, identity: 0.816

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccgacctacgattcggggccgt	Protospacer
**************************.*** .  **  

7. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 7, identity: 0.816

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
tgcgtgaacgccttatccgtcctaccgttcaagctcag	Protospacer
 ****************** ***** **** * *.* *

8. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 7, identity: 0.816

ggcgtgaacgccttatccgacctacggttctacccctg---	CRISPR spacer
ggcgtgaacgcctgatccggcctacgg---taagcctgatt	Protospacer
************* *****.*******   **  ****   

9. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 7, identity: 0.816

ggcgtgaacgccttatccgacctacggttctacccctg---	CRISPR spacer
ggcgtgaacgcctgatccggcctacgg---taagcctgatt	Protospacer
************* *****.*******   **  ****   

10. spacer 7.1|4623544|53|CP025251|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 7, identity: 0.868

gccgttgccgaatgtaggccggataaggcgttcacgccgcatccggcaaccag	CRISPR spacer
gccgttgccaaatgtaggccggataaggcgtttacgccgcatccggcatttgc	Protospacer
*********.**********************.*************** ... 

11. spacer 1.1|155329|34|CP025251|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.765

gccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
gccgcatccggcatgaacaaagcgcaggaacaag	Protospacer
*************.************ *     .

12. spacer 1.1|155329|34|CP025251|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.765

gccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
gccgcatccggcatgaacaaagcgcaggaacaag	Protospacer
*************.************ *     .

13. spacer 1.1|155329|34|CP025251|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.765

gccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
gccgcatccggcatgaacaaagcgcaggaacaag	Protospacer
*************.************ *     .

14. spacer 1.1|155329|34|CP025251|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.765

gccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
gccgcatccggcatgaacaaagcgcaggaacaag	Protospacer
*************.************ *     .

15. spacer 2.2|981475|32|CP025251|CRISPRCasFinder matches to NC_015163 (Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence) position: , mismatch: 8, identity: 0.75

ttgccgcggatcctgtctgccaataatgacaa	CRISPR spacer
ctggacggcatcctgtctgccaattttgacaa	Protospacer
.**    * ***************  ******

16. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 8, identity: 0.789

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccgtcctaccgttcaggcacaa	Protospacer
******************* ***** **** . * * .

17. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.789

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccgacctacgggtagtgcgttt	Protospacer
*************************** *    * .* 

18. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 8, identity: 0.789

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgcgagcgccttatccgacctacggttcaggtccgt	Protospacer
****.**.********************** . .**  

19. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccgtcctaccgttcaggcacaa	Protospacer
******************* ***** **** . * * .

20. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789

ggcgtgaacgccttatccgacctacggttctacccctg---	CRISPR spacer
ggcgtgaacgccttatccggcctacggat---ggcgtgaga	Protospacer
*******************.******* *     * **   

21. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccgtcctaccgttcaggcacaa	Protospacer
******************* ***** **** . * * .

22. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789

ggcgtgaacgccttatccgacctacggttctacccctg---	CRISPR spacer
ggcgtgaacgccttatccggcctacggat---ggcgtgaga	Protospacer
*******************.******* *     * **   

23. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccgtcctaccgttcaggcacaa	Protospacer
******************* ***** **** . * * .

24. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789

ggcgtgaacgccttatccgacctacggttctacccctg---	CRISPR spacer
ggcgtgaacgccttatccggcctacggat---ggcgtgaga	Protospacer
*******************.******* *     * **   

25. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccgtcctaccgttcaggcacaa	Protospacer
******************* ***** **** . * * .

26. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789

ggcgtgaacgccttatccgacctacggttctacccctg---	CRISPR spacer
ggcgtgaacgccttatccggcctacggat---ggcgtgaga	Protospacer
*******************.******* *     * **   

27. spacer 7.1|4623544|53|CP025251|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 8, identity: 0.849

--gccgttgccgaatgtaggccggataaggcgttcacgccgcatccggcaaccag	CRISPR spacer
caaccg--ggctaatgtatgccggataaggcgtttacgccgcatccggcaacctg	Protospacer
  .***  * * ****** ***************.****************** *

28. spacer 1.1|155329|34|CP025251|CRISPRCasFinder matches to NZ_CP010730 (Phaeobacter inhibens strain P88 plasmid pP88_e, complete sequence) position: , mismatch: 9, identity: 0.735

gccgcatccggcacgaacaaagcgcacgttgtca----	CRISPR spacer
agcgcatccggcaggaacaacgcgca----atcatggc	Protospacer
. *********** ****** *****    .***    

29. spacer 1.1|155329|34|CP025251|CRISPRCasFinder matches to NZ_CP010640 (Phaeobacter gallaeciensis strain P73 plasmid pP73_d, complete sequence) position: , mismatch: 9, identity: 0.735

gccgcatccggcacgaacaaagcgcacgttgtca----	CRISPR spacer
agcgcatccggcaggaacaacgcgca----atcatggc	Protospacer
. *********** ****** *****    .***    

30. spacer 1.1|155329|34|CP025251|CRISPRCasFinder matches to NC_023141 (Phaeobacter gallaeciensis DSM 26640 plasmid pGal_E78, complete sequence) position: , mismatch: 9, identity: 0.735

gccgcatccggcacgaacaaagcgcacgttgtca----	CRISPR spacer
agcgcatccggcaggaacaacgcgca----atcatggc	Protospacer
. *********** ****** *****    .***    

31. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 9, identity: 0.763

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccggcctacggttgagtgcagt	Protospacer
*******************.*********  .. *   

32. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 9, identity: 0.763

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccggcctacggttgagtgcagt	Protospacer
*******************.*********  .. *   

33. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtaaacgccttatccggcctacggtttggtgcgag	Protospacer
*****.*************.*********. .. *  *

34. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.763

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
gacgcgagcgccttatccgacctacggttcaggtccgt	Protospacer
*.**.**.********************** . .**  

35. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.763

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
gacgcgagcgccttatccgacctacggttcaggtccgt	Protospacer
*.**.**.********************** . .**  

36. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.763

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
gacgcgagcgccttatccgacctacggttcaggtccgt	Protospacer
*.**.**.********************** . .**  

37. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.763

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
gacgcgagcgccttatccgacctacggttcaggtccgt	Protospacer
*.**.**.********************** . .**  

38. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 9, identity: 0.763

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccggcctacgggtgagcacggt	Protospacer
*******************.******* *  .* *   

39. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 9, identity: 0.763

ggcgtgaacgccttatccgacctac----ggttctacccctg	CRISPR spacer
ggcgcgaacgccttatccggcctacggtaggtaatact----	Protospacer
****.**************.*****    ***  ***.    

40. spacer 5.2|4341942|56|CP025251|PILER-CR matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.839

tacag-tgcccgatgcgacgctgccgcgtcttatcgggcctacaaa-agttctgaacc	CRISPR spacer
-acggatgcccgatgcgacgctggcgcgtcttatcgggcctacaaacggccccgaat-	Protospacer
 **.* ***************** ********************** .*..*.***. 

41. spacer 7.1|4623544|53|CP025251|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.83

gccgttgc-cgaatgtaggccggataaggcgttcacgccgcatccggcaaccag	CRISPR spacer
-cgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcat	Protospacer
 * *  ** ******************.*****.***************..** 

42. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 10, identity: 0.737

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggtgtgaacgccttatccggcctacggatggcccgaga	Protospacer
**.****************.******* *   **   .

43. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.737

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccggcctacggatggcgcggga	Protospacer
*******************.******* *    *   .

44. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.737

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccggcctacgggtggcgcgaga	Protospacer
*******************.******* *    *   .

45. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.737

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccggcctacggatggcgcggga	Protospacer
*******************.******* *    *   .

46. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.737

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccggcctacgggtggcgcgaga	Protospacer
*******************.******* *    *   .

47. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.737

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccggcctacggatggcgcggga	Protospacer
*******************.******* *    *   .

48. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.737

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccggcctacgggtggcgcgaga	Protospacer
*******************.******* *    *   .

49. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.737

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccggcctacggatggcgcggga	Protospacer
*******************.******* *    *   .

50. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.737

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccggcctacgggtggcgcgaga	Protospacer
*******************.******* *    *   .

51. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.737

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtgaacgccttatccggcctacgggtgagtgcggt	Protospacer
*******************.******* *  .. *   

52. spacer 7.1|4623544|53|CP025251|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 10, identity: 0.811

--gccgttgccgaatgtaggccggataaggcgttcacgccgcatccggcaaccag	CRISPR spacer
gagtcgc--ccgtatgtaggccggataaggcgtccacgccgcatccggcgttcgg	Protospacer
  *.**.  *** ********************.***************. .*.*

53. spacer 1.1|155329|34|CP025251|CRISPRCasFinder matches to AP018698 (Arthrobacter sp. MN05-02 plasmid plasmid1 DNA, complete genome) position: , mismatch: 11, identity: 0.676

gccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
cgttcatccggcgcgagcaaagcgcacggatttc	Protospacer
  . ********.***.***********   *. 

54. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.711

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtaaacgccttatccggcctacggatggcgcggga	Protospacer
*****.*************.******* *    *   .

55. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.711

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtaaacgccttatccggcctacggatggcgcggga	Protospacer
*****.*************.******* *    *   .

56. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.711

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtaaacgccttatccggcctacggatggcgcggga	Protospacer
*****.*************.******* *    *   .

57. spacer 4.1|2530567|38|CP025251|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.711

ggcgtgaacgccttatccgacctacggttctacccctg	CRISPR spacer
ggcgtaaacgccttatccggcctacggatggcgcggga	Protospacer
*****.*************.******* *    *   .

58. spacer 5.2|4341942|56|CP025251|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.804

tacagtgcccgatgcgacgctgccgcgtcttatcgggcctacaaaagttctgaacc----	CRISPR spacer
cacgatgcctgatgcgacgctgccgcgtcttatcaggcctacaaaa----tcaatcgctt	Protospacer
.**..****.************************.***********    * **.*    

59. spacer 8.1|4859039|52|CP025251|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc	CRISPR spacer
tcggtgcctgatgcgacgctggcgcgtcttatcaggcctacgagtcgcccgt	Protospacer
 *  ***************** *******.***************.   .*.

60. spacer 8.1|4859039|52|CP025251|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc-	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaaa-ccgttacc	Protospacer
 *  *************************.***********.*. .*. *.* 

61. spacer 8.1|4859039|52|CP025251|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc--	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacag--ccgttgcca	Protospacer
 *  *************************.***********..  .*. ***  

62. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 12, identity: 0.789

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa-ctattgccgacct	CRISPR spacer
tctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaatctgcacccgaac-	Protospacer
 ...****************** ************ ******** **..  **** * 

63. spacer 7.1|4623544|53|CP025251|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 12, identity: 0.774

gccgttgccgaatgtaggccggataaggcgttcacgccgcatccggcaaccag	CRISPR spacer
gtaaccgcacatcgtaggccggataaggcgtttacgccgcatccggcaaccgc	Protospacer
*. ...**  * .*******************.******************. 

64. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***   

65. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***   

66. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***   

67. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***   

68. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***   

69. spacer 7.1|4623544|53|CP025251|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 13, identity: 0.755

gccgttgccgaatgtaggccggataaggcgttcacgccgcatccggcaaccag	CRISPR spacer
attatttgcttttgtaggccggataaggcgtttacgccgcatccggcaacata	Protospacer
....**  *   ********************.*****************  .

70. spacer 7.1|4623544|53|CP025251|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 13, identity: 0.755

gccgttgccgaatgtaggccggataaggcgttcacgccgcatccggcaaccag	CRISPR spacer
ctacacgtcacacgtaggtcggataaggcgttcacgccgcatccggcaaacac	Protospacer
 .   .*.*. *.*****.****************************** ** 

71. spacer 8.1|4859039|52|CP025251|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******.***********    .** **.    

72. spacer 8.1|4859039|52|CP025251|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******.***********    .** **.    

73. spacer 8.1|4859039|52|CP025251|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******.***********    .** **.    

74. spacer 8.1|4859039|52|CP025251|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******.***********    .** **.    

75. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
cacgatgcctgatgcgacgctgccgcgtcttatcaggcctacaaaatcaatcgcttt	Protospacer
  *.******************.*********************   . ..** ..*

76. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

77. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccac	Protospacer
.. .*****************. ********************* * .*  ** * .

78. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

79. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaacttgtgcctgaa--	Protospacer
.. .****************** ************ ********  .*.*  *.**   

80. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

81. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccac	Protospacer
.. .*****************. ********************* * .*  ** * .

82. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

83. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaacttgtgcctgaa--	Protospacer
.. .****************** ************ ********  .*.*  *.**   

84. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

85. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccac	Protospacer
.. .*****************. ********************* * .*  ** * .

86. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

87. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaacttgtgcctgaa--	Protospacer
.. .****************** ************ ********  .*.*  *.**   

88. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

89. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccac	Protospacer
.. .*****************. ********************* * .*  ** * .

90. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

91. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaacttgtgcctgaa--	Protospacer
.. .****************** ************ ********  .*.*  *.**   

92. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctac--aactattgccgacct	CRISPR spacer
ccggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaaactgcactcaac--	Protospacer
 . .****************** ************ ******  ****..  .*.**  

93. spacer 6.1|4402470|57|CP025251|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctac--aactattgccgacct	CRISPR spacer
ccggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaaactgcactcaac--	Protospacer
 . .****************** ************ ******  ****..  .*.**  

94. spacer 7.1|4623544|53|CP025251|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.736

gccgttgccgaatgtaggccggataaggcgttcacgccgcatccggcaaccag	CRISPR spacer
atgatttatccatgtaggccggataaggcgtttacgccgcatccggcaattgt	Protospacer
.. .**  .  *********************.****************... 

95. spacer 5.1|4341843|63|CP025251|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.762

ttggtgcacgatgcctgatgcgacgctggcgcgtcttatcaggcctacattggtgccgga	CRISPR spacer
tcggtgcacgatgcctgatgcgacgctgccgcgtcttatcaggcctaca--------aaa	Protospacer
*.************************** ********************        ..*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 229459 : 292285 57 Planktothrix_phage(11.11%) plate,transposase,tRNA NA
DBSCAN-SWA_2 317099 : 365724 52 Escherichia_phage(33.33%) protease,transposase,tRNA NA
DBSCAN-SWA_3 965149 : 972872 10 uncultured_Caudovirales_phage(50.0%) integrase attL 959136:959150|attR 971476:971490
DBSCAN-SWA_4 1228337 : 1273440 63 Enterobacteria_phage(55.77%) tRNA,portal,lysis,capsid,tail,terminase,head,integrase attL 1220972:1220987|attR 1280617:1280632
DBSCAN-SWA_5 2445731 : 2456014 7 Pseudomonas_phage(33.33%) NA NA
DBSCAN-SWA_6 2774639 : 2817155 58 Salmonella_phage(54.17%) holin,tail,terminase,head NA
DBSCAN-SWA_7 2963480 : 2970619 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_8 4120302 : 4131864 15 Enterobacteria_phage(88.89%) integrase attL 4120120:4120142|attR 4130754:4130776
DBSCAN-SWA_9 5062244 : 5103166 53 Enterobacteria_phage(51.06%) portal,lysis,holin,tail,integrase attL 5061995:5062014|attR 5107119:5107138
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP025253
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 33 : 42997 58 Escherichia_phage(42.11%) integrase,transposase attL 3416:3430|attR 38149:38163
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage