CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP018039	Bordetella pertussis strain J294 chromosome, complete genome	5 crisprs	csa3,cas3,DinG,DEDDh	0	0	24	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP018039_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018039_1

250584-250668

Orphan

Consensus_repeat	Method
GGTGCCTGTCCCCGCGGGGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP018039_1

>merge|CP018039|1|250584-250668|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAGATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAGGGTGCCTGTCCCCGCGGGGACAG

>CP018039|1|1|250584-250668|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAG	ATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAG
GGTGCCTGTCCCCGCGGGGACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP018039.1\|AUK99203.1\|239541_240285_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
CP018039.1\|AUK99213.1\|254373_255759_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|182376
CP018039.1\|AUK99216.1\|257785_258766_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223751
CP018039.1\|AUK99218.1\|259949_260849_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
CP018039.1\|AUK99205.1\|245055_246012_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270296
CP018039.1\|AUK99212.1\|251616_253506_-\|DNA-mismatch-repair-protein-MutL	unknown	unknown	gnl\|CDD\|234630
CP018039.1\|AUK99204.1\|240328_241372_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270320
CP018039.1\|AUK99214.1\|255689_256226_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|223873
CP018039.1\|AUK99208.1\|247874_248573_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319796
CP018039.1\|AUL02372.1\|242385_243645_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129868
CP018039.1\|AUK99209.1\|248569_249271_-\|DnaA-regulatory-inactivator-Hda	unknown	unknown	gnl\|CDD\|236347
CP018039.1\|AUL02373.1\|253610_254231_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182775
CP018039.1\|AUK99202.1\|238769_239525_+\|gamma-hydroxybutyrate-dehydrogenase	unknown	unknown	gnl\|CDD\|185358
CP018039.1\|AUK99215.1\|256377_257769_+\|fumarate-hydratase,-class-II	unknown	unknown	gnl\|CDD\|234779
CP018039.1\|AUK99217.1\|258901_259885_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270295
CP018039.1\|AUK99206.1\|246030_246522_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|172582
CP018039.1\|AUK99219.1\|260955_262710_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
CP018039.1\|AUK99207.1\|246518_247874_-\|poly(A)-polymerase	unknown	unknown	gnl\|CDD\|130997
CP018039.1\|AUK99210.1\|249523_250573_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
CP018039.1\|AUK99211.1\|250678_251620_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626

Protein	Function_ID	Function_description	E-value
CP018039.1\|AUK99203.1\|239541_240285_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.58304e-45
CP018039.1\|AUK99213.1\|254373_255759_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	1.25625e-84
CP018039.1\|AUK99216.1\|257785_258766_-\|hypothetical-protein	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.13912e-41
CP018039.1\|AUK99218.1\|259949_260849_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.62875e-38
CP018039.1\|AUK99205.1\|245055_246012_+\|hypothetical-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	6.01101e-118
CP018039.1\|AUK99212.1\|251616_253506_-\|DNA-mismatch-repair-protein-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
CP018039.1\|AUK99204.1\|240328_241372_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99378e-85
CP018039.1\|AUK99214.1\|255689_256226_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	2.28113e-54
CP018039.1\|AUK99208.1\|247874_248573_-\|hypothetical-protein	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.91431e-64
CP018039.1\|AUL02372.1\|242385_243645_+\|hypothetical-protein	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.48771e-95
CP018039.1\|AUK99209.1\|248569_249271_-\|DnaA-regulatory-inactivator-Hda	gnl\|CDD\|236347	PRK08903, PRK08903, DnaA regulatory inactivator Hda; Validated.	2.81236e-100
CP018039.1\|AUL02373.1\|253610_254231_+\|hypothetical-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	8.25718e-70
CP018039.1\|AUK99202.1\|238769_239525_+\|gamma-hydroxybutyrate-dehydrogenase	gnl\|CDD\|185358	PRK15461, PRK15461, sulfolactaldehyde 3-reductase.	1.19571e-122
CP018039.1\|AUK99215.1\|256377_257769_+\|fumarate-hydratase,-class-II	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
CP018039.1\|AUK99217.1\|258901_259885_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.35876e-158
CP018039.1\|AUK99206.1\|246030_246522_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|172582	PRK14092, PRK14092, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.	2.78166e-87
CP018039.1\|AUK99219.1\|260955_262710_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
CP018039.1\|AUK99207.1\|246518_247874_-\|poly(A)-polymerase	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	4.58369e-147
CP018039.1\|AUK99210.1\|249523_250573_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
CP018039.1\|AUK99211.1\|250678_251620_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	4.17279e-156

>CP018039.1|AUK99210.1|249523_250573_+|phosphoribosylformylglycinamidine-cyclo-ligase
MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIGGFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDVVMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPKLFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQDGMAQTVVV
>CP018039.1|AUK99209.1|248569_249271_-|DnaA-regulatory-inactivator-Hda
MNRQLLLDVLPAPAPALNNYIAGPNGQALAAAHALTAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMPRLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRLGWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITIPLLRAMLADPHSQAT
>CP018039.1|AUK99208.1|247874_248573_-|hypothetical-protein
MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLFDHLEDAKS
>CP018039.1|AUK99207.1|246518_247874_-|poly(A)-polymerase
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEETAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
>CP018039.1|AUK99206.1|246030_246522_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MNGSPASTLAYVGLGASLGDAAATLRSVLAELAAAPGILACKASRLYRTAPVEAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLLLYGEQAIDHPRLSVPHPRMHERAFVLAPLCELVPALRLAQGDCAALLAALEDQAIEPLR
>CP018039.1|AUK99205.1|245055_246012_+|hypothetical-protein
MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDALARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQVPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQALATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTGSKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQMLERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP
>CP018039.1|AUL02372.1|242385_243645_+|hypothetical-protein
MMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGGLLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDMIERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACFMLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAAIGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVVNLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFLVLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMWLPQQVK
>CP018039.1|AUK99204.1|240328_241372_-|C4-dicarboxylate-ABC-transporter-substrate-binding-protein
MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPGDGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEPRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIHKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLEFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVSNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTLGKSASN
>CP018039.1|AUK99203.1|239541_240285_-|GntR-family-transcriptional-regulator
MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVGRFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIYQVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDGAGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSLHVRNAASVAIAILQDSLADAAATAE
>CP018039.1|AUK99202.1|238769_239525_+|gamma-hydroxybutyrate-dehydrogenase
MLPTATHIQAALEGADGALQGMGPGALFINMSTILPQETDLIAQRLAERGMRMLDSPVGRSAMEAQRGTLLILASGSAQDKARARDALLCMGNQVIDCGEVGGGSRVKVVNNFMGISLNALTAEALTLAEASGLSVELALEVMRGTIAGLGHMNITYPNKVLRGDLSAGFQVDLAHKDLGLALELAARSRACVPMGSAAFQSYTAARAQGRGGQDYSAIYPVMRSLSGLPEALPYQVDTPVEADPFGAAAR
>CP018039.1|AUK99211.1|250678_251620_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMDIGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTMLYYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQRALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAGLVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLTWLRAQPERVIIDCLAGDAVARTVDAMARALPD
>CP018039.1|AUK99212.1|251616_253506_-|DNA-mismatch-repair-protein-MutL
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>CP018039.1|AUL02373.1|253610_254231_+|hypothetical-protein
MVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPFLPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLDRNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVISLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ
>CP018039.1|AUK99213.1|254373_255759_-|N-acetylmuramoyl-L-alanine-amidase
MVERDCPPAHGALSPRAAARRRLISVAATLLVLPVVPRLAHAATILAVRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAALNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDLYPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAPPIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQPYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGASSTQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKINRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRYFTANPPLARVGDVS
>CP018039.1|AUK99214.1|255689_256226_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MSAPPTTLCLHLPDEAATENLARQLAPLVDGRRGGQPGGQIHLQGDLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAGFRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVPPPTARSLPAPPPADA
>CP018039.1|AUK99215.1|256377_257769_+|fumarate-hydratase,-class-II
MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPALKALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLHQLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALKTLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVMGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDMTNARR
>CP018039.1|AUK99216.1|257785_258766_-|hypothetical-protein
MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRHKLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWLAGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAVYGLARHSGNGLLRELARNPLLVSTLLSLACNLAGLSLPGPIDTVMARLGAAALALGIMCVGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTASAAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN
>CP018039.1|AUK99217.1|258901_259885_+|ABC-transporter-substrate-binding-protein
MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGSTDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD
>CP018039.1|AUK99218.1|259949_260849_-|LysR-family-transcriptional-regulator
MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGLLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANNHPGLTRTSLGHTELVHLSRLPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIERLRQACSVLQAQPAPQPE
>CP018039.1|AUK99219.1|260955_262710_+|gamma-glutamyltransferase
MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERAQAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVHYDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHRQHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVGHRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVREPVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFADRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAIEVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVANRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIALPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPRREGLALGD

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Crispr_ID: CP018039_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018039_2

432024-432117

Orphan

Consensus_repeat	Method
GTGCCTGTCCCCGCCGGGACAGGCAC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of CP018039_2

>merge|CP018039|2|432024-432117|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCACCCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGCGTGCCTGTCCCCGCCGGGACAGGCAC

>CP018039|2|2|432024-432117|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCAC	CCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGC
GTGCCTGTCCCCGCCGGGACAGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP018039.1\|AUK99383.1\|440052_441024_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
CP018039.1\|AUK99377.1\|432762_433107_-\|TIGR01244-family-protein	unknown	unknown	gnl\|CDD\|225984
CP018039.1\|AUK99373.1\|427133_427868_-\|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235574
CP018039.1\|AUK99380.1\|437024_437780_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223930
CP018039.1\|AUK99370.1\|422311_423517_+\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|129314
CP018039.1\|AUK99384.1\|441034_442012_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176106
CP018039.1\|AUK99378.1\|433206_434607_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224089
CP018039.1\|AUL02381.1\|425040_426354_-\|short-chain-fatty-acid-transporter	unknown	unknown	gnl\|CDD\|224942
CP018039.1\|AUK99374.1\|430360_431263_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018039.1\|AUK99369.1\|421138_422116_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018039.1\|AUK99381.1\|437975_439208_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
CP018039.1\|AUK99368.1\|420551_421046_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP018039.1\|AUK99379.1\|436395_436914_-\|methyltransferase	unknown	unknown	gnl\|CDD\|224204
CP018039.1\|AUK99385.1\|442137_443310_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
CP018039.1\|AUK99372.1\|426544_426724_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377342
CP018039.1\|AUK99375.1\|431394_431793_-\|elongation-factor-G	unknown	unknown	gnl\|CDD\|234569
CP018039.1\|AUK99367.1\|419363_420422_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133030
CP018039.1\|AUK99376.1\|432203_432674_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
CP018039.1\|AUK99371.1\|423513_425025_+\|TRAP-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270238
CP018039.1\|AUK99382.1\|439200_439986_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181723

Protein	Function_ID	Function_description	E-value
CP018039.1\|AUK99383.1\|440052_441024_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.06741e-117
CP018039.1\|AUK99377.1\|432762_433107_-\|TIGR01244-family-protein	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	3.40043e-35
CP018039.1\|AUK99373.1\|427133_427868_-\|DNA-polymerase-III-subunit-epsilon	gnl\|CDD\|235574	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional.	2.40573e-142
CP018039.1\|AUK99380.1\|437024_437780_+\|hypothetical-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.14565e-78
CP018039.1\|AUK99370.1\|422311_423517_+\|sodium/glutamate-symporter	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	1.2444e-106
CP018039.1\|AUK99384.1\|441034_442012_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176106	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LTTRs involved in degradation of aromatic compounds, such as CbnR, BenM, CatM, ClcR and TfdR, as well as that of other transcriptional regulators clustered together in phylogenetic trees, including XapR, HcaR, MprR, IlvR, BudR, AlsR, LysR, and OccR. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.33368e-60
CP018039.1\|AUK99378.1\|433206_434607_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.43796e-109
CP018039.1\|AUL02381.1\|425040_426354_-\|short-chain-fatty-acid-transporter	gnl\|CDD\|224942	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism].	6.57351e-166
CP018039.1\|AUK99374.1\|430360_431263_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	5.3673e-23
CP018039.1\|AUK99369.1\|421138_422116_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.0826e-23
CP018039.1\|AUK99381.1\|437975_439208_+\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.36236e-118
CP018039.1\|AUK99368.1\|420551_421046_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.34959e-07
CP018039.1\|AUK99379.1\|436395_436914_-\|methyltransferase	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.12064e-44
CP018039.1\|AUK99385.1\|442137_443310_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	4.27565e-82
CP018039.1\|AUK99372.1\|426544_426724_-\|hypothetical-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	0.00323203
CP018039.1\|AUK99375.1\|431394_431793_-\|elongation-factor-G	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	1.37761e-90
CP018039.1\|AUK99367.1\|419363_420422_-\|glycosyltransferase	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	4.18053e-89
CP018039.1\|AUK99376.1\|432203_432674_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.38587e-30
CP018039.1\|AUK99371.1\|423513_425025_+\|TRAP-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270238	cd13520, PBP2_TAXI_TRAP, Substrate binding domain of TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This group includes Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family and closely related proteins. TRAP transporters are ubiquitous in prokaryotes, but absent from eukaryotes. They are comprised of an SBP (substrate-binding protein) of the DctP or TAXI families and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function. The substrate-binding domain of TAXI proteins belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and tworeceptor cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.13066e-82
CP018039.1\|AUK99382.1\|439200_439986_+\|enoyl-CoA-hydratase	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	5.15941e-155

>CP018039.1|AUK99375.1|431394_431793_-|elongation-factor-G
MTRRTSIERYRNIGISAHIDAGKATTTERILFYTGITHKLGEVHEGAATMDWMEQEQGRGITITSAATTAFWRGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQEVATVMVVLPGQ
>CP018039.1|AUK99374.1|430360_431263_+|IS481-family-transposase
MVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDKYNLLTVHS
>CP018039.1|AUK99373.1|427133_427868_-|DNA-polymerase-III-subunit-epsilon
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSDPEALAVHGLTTEFLADKPRFAEVAEQFLAFIADAELIAHNAAFDVKFFNAELQRIGRDPLNTHCENIVDSLLHARSLHPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVDDQGANANGALVLGKFDASVLTVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAESGQPG
>CP018039.1|AUK99372.1|426544_426724_-|hypothetical-protein
MHPDTNTMLIIIAAAVALMIVGFGLRDRNLGLGLLGIGLIAALATIAYKAYITFNSFYY
>CP018039.1|AUL02381.1|425040_426354_-|short-chain-fatty-acid-transporter
MFKLMSRSAVKMVERYLPDPYVFVVLLTLVAAGAAMIIEGQTPMAVVRWWGNGFWGLLTFAMQMLLVLVTGYMLASTPLVKRMLARLASLATSAGGAIILVSVVSLAASWINWGFGLVVGALFAKQIARQVRVDYRLLVASAYSGFIIWHGGLAGSIPLTIATEGHFSADKIGIIPTGDTIFAVFNLVIVVAMFILVPLVNRLMLPDEKESVYVDPARLEEASVPASDDDKRPAARLENSRLLAWLIAAGGLAYMFDYYVVRGAGLNLNVINFSFLILAILLHGTPRRLLASLDEAIKGGAGIVIQFPFYAGIMAIMMDSGLAATLSEWFVSIASAATLPFWTFISAGIVNIFIPSGGGQWAVQSPIVISAAQALGADMPRVAMAVAWGDAWTNMLQPFWALPVLAIAGLKAKDIMGYCIIQLLVTGVIISVGLSFF
>CP018039.1|AUK99371.1|423513_425025_+|TRAP-ABC-transporter-substrate-binding-protein
MTMFIRWLILSACLLLAACSRAPDTEILQRDVGQTLAATYGPDLFDIVALRRMGSATDSTAPPGQTRRVVYYDVVLGLKKDLTLGAWDQPGAAALVSLLGAGPRSISGVKSSGNAAGDQIVAHASAIYQRDAEQWVHVAPASFTATEAPSLDTGAPPPVTRQLLQTLEQITRSVPYSASSTAQHVVQQELERSVARINGRLARLQKGYPLATGPDKGEYLAFGQALAAIGRNEQVRVIPLITGGSADNMAMLRSGAAVAALSQADIAQLAYEGKGPFESQGPFSGLRALGSLYPELVHIVVRQGDGIATVGALRGKKIALGPSGSAVRTTLETVLAAHGLQPGRDYAVIDTPAAAALPQLSEGRVDAVAQVIGTPAAPLRAALTQARLALLPLDRAAIDKLVQADPTLMALDIPANTYPSQAAAIPTVGMAALLVTTADLTRDEAAHMVDVVYRAGQDLLAAGSAQGAQVSAANAGRGLSIPLHDGAVEAFEKLGAPPLPEGR
>CP018039.1|AUK99370.1|422311_423517_+|sodium/glutamate-symporter
MISLTPVQSLLACCLVLVAGRILTTRIGVLSRYSIPDPIVGGLLFAVLATALDTWGGIQISLETNIKPTLLLIFFGCIGLTADLKLLARGGPRLIAFLLALIPFLVLQNAVGLGLAWLLDMHPLMGLIGGTITLVGGHGTGAAYAARFADINNIQDVMALAMTAATIGLVLGGIIGGPVAEWLIRRHKLDPRMAGKDANQVLPEVETTAEAPTATSFITSLTAVFVTVVVGTYLAGLVEDAPISLPNFLWCLATGAIIRNFGGYVGIRLDDRVSEIIGSISLSLFLGLTMMTLDLSSVVRLAGPLALMLVAQALVCALYAGWAVFRMLKRDYEAAVMAAAFCGFAMGATATAIANMQALTRRHGPAPESFIVVPVTGAFLVDILNVIVLTSLIALPFVGGM
>CP018039.1|AUK99369.1|421138_422116_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHSYMVRADLAG
>CP018039.1|AUK99368.1|420551_421046_+|GNAT-family-N-acetyltransferase
MPQSYIVRTMRPADVEAVLRVQAAVYPASLLESAALFQNRIEIAPATCQVALDGQDLIGYLIAYPWDAGLPPALDRSLERLPGAADTWFVHDCAVLPAAQGGGVAAALLAGGRAQARRLGLRRASLVALAQAVGYWLRHGYQPLADSDALRAKLAGYGDGARYM
>CP018039.1|AUK99367.1|419363_420422_-|glycosyltransferase
MFMYTEFRSQLLAGAGTSAAGQSARMAVLAGDGATGVQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGIRYVQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVRRQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGLYAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLSLSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFIARQRRGRAKRAAKARSQ
>CP018039.1|AUK99376.1|432203_432674_-|universal-stress-protein
MFKKILIPTDGSPLSAQAANAGICFARSTGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKASAEQAEKYLKLILDRAETAGVKAESRAVSNFNVADGIVQAAGEAGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAHTAVLVYRVKEDKDKK
>CP018039.1|AUK99377.1|432762_433107_-|TIGR01244-family-protein
MSAAIKPLTENFAVAPQLGPADMADVAAAGYKSVIINRPDFEGGPDQPTAADVSQAAQALGLQVEYQPVVGSAMTAADVARFAELLRTMPGPVLAYCRTGTRCTNLFAAAQQLG
>CP018039.1|AUK99378.1|433206_434607_-|GntR-family-transcriptional-regulator
MRQADATLVTQLADDLARRIDEHGLRPGTRLPSIRRMAEQSGVSRFTVVEAYDRLVARGLVQSRHGAGFFVRARSASLTALASARVPQAAPETPVRVDVSWLLRNMFRETAAGMPGGAGLLPPEWLDPDMVAAAVRAVGRTVRGNLVSYGSPQGYAPLRQQLASMLQADGVPAHPERNLLTTNGVTHGLDIVARHLIKPGDTVLVEDPAWFVIFGRLAAFGARPVGVPRGPDGPDLAMLDRLAAEHKPRLYIINGAVHNPIGHTLSAGAAYDILRLAERHDFMVVEDDTYADLHPGGAMKLAALDRLERVILVGGFSKMLAASLRVGYIAAGAETLQRLTDLKMLAGLTSPELGERVVHRVLVEGQYQRHIERVRARVNEARLRSIQALQQLGLSVPHEPHAGMFVWADCGRDSEPVARNAAERGMLLAPGTLFSPSGAPSTMLRFSVAMVDTPGIWQSIAAVMAQ
>CP018039.1|AUK99379.1|436395_436914_-|methyltransferase
MDTVWMEIWTTVRNEFADIPDVAEATRIVLRLGMAVALGGLLGYERERSGKAAGLRTHMLVALGAALFVLVPLQGGMEVGDLSRVLQGVIAGIGFLGAGVIIKLGNEGEIRGLTTSAGIWLTAAIGVAAGMGREATALASTLIALFVLAALRRLEKRIAARDDKRVVAQPPP
>CP018039.1|AUK99380.1|437024_437780_+|hypothetical-protein
MDYLVSLAQQPAAWAALATLIAMEVVLGIDNLIFISILTNKLPPQHQTKARRIGIGMALILRLALLGTVAFIVQLTQPVFELFGHGFSWRDVILVAGGLFLVWKATKEIHHHVDPNPGDDMFGGKAATLGFAAAVAQILMLDLVFSIDSIITAVGMTEHIPIMFVAVIVAVAVMLLAAEPLARFIERNPTVVMLALAFLMMIGMTLIAEGFGAHVPKGYIYAAMAFSALVEGLNMMARRAREGRGAGAAGG
>CP018039.1|AUK99381.1|437975_439208_+|CoA-transferase
MSGPLEGVRILDVTTVLMGPYATQILGDLGADVIKVEPPAGDNVRGIGPGRHADMGGIFLHANRSKRSIALDLKNPAGREALLKVAATCDVLVYNVRPQAMARLGLSYAEVAQANPSILYVGMYGYDQRGPYAARAAYDDLIQGAVGIPSLSVEAGSDIPRYAPSAMVDRIVGISAANAVTAGLYHRARTGQGQAIDVPMFETMAHLILGDHMMGQTFEPPLGPPGYPRILNADRRPYATRNGHICVLLYADKHWKAFFELIGQPGRDAADPRFRDIGTRTQHIHAIYRLVSDAIASRTTEEWLAAFEAADIPAMPVHTMASLLRDPHLEAIGFFGMVDHPSEGAVRMMAVPSRWSGTPPQPRGHAPRLGEHSVDVLKEAGYDDEAIAALVRNGAAIAAARQLPEGTDHD
>CP018039.1|AUK99382.1|439200_439986_+|enoyl-CoA-hydratase
MTDFLRHERHGGVLLLTMDRERTRNALSDADAVEALVQACARIGADLSVRAVVLTGSHGVFSSGGNLKTLSDTVGAGLGEPVHSLQAYRSGIQRIPLALYNLEVPTIAAVNGPAIGAGCDLACMCDIRLAARQASFAESFVKLGLTPGDGGAWLLPRIVGMSRACELAFTGRSIDAARARELGLVSEVFDADALLPAALALAQEIAQHSGHALRLTKRLLREGQHTRLDTLLELSAGFQALAHHTQEHAGALDAHLSRKRG
>CP018039.1|AUK99383.1|440052_441024_+|ABC-transporter-substrate-binding-protein
MHSRTLALALLSVAALAQGGSARAASDYPAHPVKIIVSLPPGSGADTTARFLSKHLAERFKQPFVVENRPGGNSFIAAQAVATAPPDGYTLFVASNSPMTTNAAVFKNLPYDAVKDFAPVAPIARFPMALVVPANSPYRSVADLVAAARAAPGQLNFASGTATYQVVLELFHEQNGIKATHVPYKGTSAALADVAGGVVQYSVADVSAALPLIRGGKLRPLAVTSTRRIKDLPDVPTMQESGNKGFEAYAWTAAFFPAKVDPAIVARVSDAVQALVRSQEGKAFMEQLGGEPFVGGPDTLAAFQRDELASMRRIAKLANIQQE
>CP018039.1|AUK99384.1|441034_442012_-|LysR-family-transcriptional-regulator
MWTGQYIVHIASPAHHWRRAVELRQLKQLLVLSETLNFHRAAERLHMAQPPLSTAIKKLEQELGVQLFERLPAGLQPTPAAEVVLRYARATLFYADEIQRAAQEGASGKQGMLKVGFVGSSIYSLMPQLLSAFRKDYPRVDLVIEESTTVDLLRRLDAHTLDVALVRFPVLEPSTARITLLQADHLMLAVPAGSRYAQRDDVALDELADEPFIGYSRTHVPGMHALIMYAFQQYGVVPHIAQEAIQVQTILSLVESGLGLAIVPKVACRQAGSGVRLVNVPQLAETIKVGIALAVHPDNATPTTANFVDMACRLMQTEPAAGQAR
>CP018039.1|AUK99385.1|442137_443310_+|acyl-CoA-dehydrogenase
MGAILGTIIEALQLAAIPAHDEALRPAVRAFLDEALREMPADRRARSWMGHDAEFSRALARQGWLGLTLPVEYGGAGRSNFARFVLSEELLAVGAPVSAHWVADRQTAPLILRFGSPAQRAFYLPRIIRGEAFFAIGMSEPDTGSDLASVRTRATPVADGWLLNGRKIWTTNAHRSHYMCALVRTSGAPEDRHRGLSQMIFDLALPGIEIRPIRDIAGDAHFCEVLFDNVLLPHDALVGEEGSGWRQVMAELALERSGPERIYSSMVLLDGWLAHLRCDAAPQRAQVCLAGRLAARLAVLRSMSLAVSQRLEQGADASLAAVLVKDLGTEFEQAVPELIGQALHASPQPAPDDVLMRTLAYLTLINPTFSLRGGTRHILRGIIARELGLR

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Crispr_ID: CP018039_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018039_3

996336-996430

Orphan

Consensus_repeat	Method
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP018039_3

>merge|CP018039|3|996336-996430|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTTATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAGTAAAAGGGCACCCGCAAGGGTGCCTTTTT

>CP018039|3|3|996336-996430|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	ATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAG
TAAAAGGGCACCCGCAAGGGTGCCTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
CP018039.1\|AUL02411.1\|990498_991407_+\|sulfate-adenylyltransferase-small-subunit	unknown	unknown	gnl\|CDD\|235375
CP018039.1\|AUK99859.1\|999542_1000559_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
CP018039.1\|AUK99854.1\|994710_995583_-\|multidrug-DMT-transporter-permease	unknown	unknown	gnl\|CDD\|274527
CP018039.1\|AUK99855.1\|995888_996269_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
CP018039.1\|AUK99847.1\|985765_986800_+\|sulfate-transporter-subunit	unknown	unknown	gnl\|CDD\|224529
CP018039.1\|AUK99849.1\|987040_987715_+\|sulfate-ABC-transporter-permease-subunit-CysT	unknown	unknown	gnl\|CDD\|131194
CP018039.1\|AUK99863.1\|1008383_1009766_+\|multidrug-transporter	unknown	unknown	gnl\|CDD\|273830
CP018039.1\|AUK99861.1\|1002699_1003431_+\|pseudouridylate-synthase	unknown	unknown	gnl\|CDD\|224108
CP018039.1\|AUK99852.1\|992894_994169_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|275263
CP018039.1\|AUK99848.1\|986815_987019_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131194
CP018039.1\|AUK99858.1\|998355_999405_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381320
CP018039.1\|AUK99851.1\|988636_989701_+\|sulfate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213263
CP018039.1\|AUK99864.1\|1009835_1010087_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225170
CP018039.1\|AUK99857.1\|997300_998251_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018039.1\|AUK99862.1\|1005207_1008387_+\|multidrug-efflux-RND-transporter-permease	unknown	unknown	gnl\|CDD\|273335
CP018039.1\|AUK99860.1\|1002067_1002640_-\|chorismate--pyruvate-lyase	unknown	unknown	gnl\|CDD\|225703
CP018039.1\|AUL02412.1\|1003482_1004400_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
CP018039.1\|AUK99853.1\|994322_994703_+\|hypothetical-protein	unknown	unknown	unknown
CP018039.1\|AUK99850.1\|987829_988612_+\|sulfate-ABC-transporter-permease-subunit-CysW	unknown	unknown	gnl\|CDD\|226665
CP018039.1\|AUK99856.1\|996518_997205_+\|coenzyme-A-pyrophosphatase	unknown	unknown	gnl\|CDD\|239518

Protein	Function_ID	Function_description	E-value
CP018039.1\|AUL02411.1\|990498_991407_+\|sulfate-adenylyltransferase-small-subunit	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP018039.1\|AUK99854.1\|994710_995583_-\|multidrug-DMT-transporter-permease	gnl\|CDD\|274527	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.	3.74356e-26
CP018039.1\|AUK99855.1\|995888_996269_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	1.34063e-62
CP018039.1\|AUK99847.1\|985765_986800_+\|sulfate-transporter-subunit	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
CP018039.1\|AUK99849.1\|987040_987715_+\|sulfate-ABC-transporter-permease-subunit-CysT	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	5.60551e-119
CP018039.1\|AUK99863.1\|1008383_1009766_+\|multidrug-transporter	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	9.9815e-102
CP018039.1\|AUK99861.1\|1002699_1003431_+\|pseudouridylate-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	7.73356e-72
CP018039.1\|AUK99852.1\|992894_994169_+\|radical-SAM-protein	gnl\|CDD\|275263	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B. Members of this family are the downstream member (B) of a pair of tandem-encoded radical SAM enzymes. Most of these radical SAM gene pairs have an additional upstream regulatory gene in the MarR family. Examples of high sequence identity (over 96 percent) from cassettes in several Treponema species of the oral cavity to those in multiple Firmicutes in the gut microbiome suggest recent lateral gene transfer, as might be expected for antibiotic resistance genes. The function is unknown.	4.71758e-24
CP018039.1\|AUK99848.1\|986815_987019_+\|hypothetical-protein	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	4.38349e-06
CP018039.1\|AUK99858.1\|998355_999405_+\|aldo/keto-reductase	gnl\|CDD\|381320	cd19094, AKR_Tas-like, Escherichia coli Tas protein and similar proteins. Escherichia coli Tas protein is the prototype of this family. It is an NADP(H)-dependent aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NADP(H) as a hydride donor.	0
CP018039.1\|AUK99851.1\|988636_989701_+\|sulfate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.07125e-165
CP018039.1\|AUK99864.1\|1009835_1010087_-\|hypothetical-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	2.42408e-12
CP018039.1\|AUK99857.1\|997300_998251_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP018039.1\|AUK99862.1\|1005207_1008387_+\|multidrug-efflux-RND-transporter-permease	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
CP018039.1\|AUK99860.1\|1002067_1002640_-\|chorismate--pyruvate-lyase	gnl\|CDD\|225703	COG3161, UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) [Coenzyme metabolism].	1.05194e-17
CP018039.1\|AUL02412.1\|1003482_1004400_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.56316e-67
CP018039.1\|AUK99859.1\|999542_1000559_-\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	2.74666e-23
CP018039.1\|AUK99850.1\|987829_988612_+\|sulfate-ABC-transporter-permease-subunit-CysW	gnl\|CDD\|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	8.42883e-141
CP018039.1\|AUK99856.1\|996518_997205_+\|coenzyme-A-pyrophosphatase	gnl\|CDD\|239518	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.	2.60589e-72

>CP018039.1|AUK99855.1|995888_996269_+|50S-ribosomal-protein-L19
MNLIAILEQEEIARLTGGNAVTEFAPGDTVVVSVNVVEGTRKRVQAFEGVVIAKRNRGLNSSFIVRKISSGEAVERTFQLYSPQIAGIEVKRRGDVRRAKLYYLRSRSGKSARIKEKLVLKKAKSA
>CP018039.1|AUK99854.1|994710_995583_-|multidrug-DMT-transporter-permease
MSYTSLILVVLAAMAHAAWNLLAKRAAMVGPMFVFAYGLAATILYAPWVIWVLAHDGMVWSWPVVLCILASSMLHLGYSLCLQRGYQVADLSVVYPIARGTGPLLSTMGAFTLLSEPATTTGIAGMLCVVGGVLLIATQGRLGMFRQAQAWIGVRWGVVIGLFIAAYTVVDAYGVKILLIMPVLFDWFTCATRTLMMTPHVLRRRAQYWPAMRGYWHLAIAVGVLSPLGYILVLYALRNGAPLSLVAPAREMSMMLGTLAGMFLLREKVGIGRLAGCLAILAGVVLLGSS
>CP018039.1|AUK99853.1|994322_994703_+|hypothetical-protein
MTIATTLDAATSLPTAVPGRTLGALRRLARAWAGAAVPQRKWPFPPTPPGQAQPCTPCTDSQPRSVQAVQPAQARALHAQAELSGAATQAATQVLSTKAKIIDVLLVAVWGAMIPALMWLGAAGGF
>CP018039.1|AUK99852.1|992894_994169_+|radical-SAM-protein
MASTEHSFSAGFGSPAAAPAALRGRGAVTNVPHRFQQADRVRVDDGWANPDYTAGSDAAALPSVAEALGQGGRRAIPIAVEGADASPNTCAQAPAPRTIVQAEEARKMLSRNDSPDIPFDVAANPYRGCEHGCVYCYARPTHAYLGYSPGLDFETRLVAKANAVAALRAELARPGYRASPINIGSATDAYQPIERTWRLTRGMLELLLQTRHPLTVVTKNALVERDLDLLQDLARQKLVTVFVSITTLDAAMARTLEPRASAPYRRLQTVRTLAQAGVPVGVLVAPVIPFINDESLEHILQEASAAGACYASYTVLRLPWEVKEVFETWLQAHFPDRAQRVLHRIEDLRNGRRNDTAFGSRMRGTGIWADLLRQRFALATRKLDLNRHRPELDTHRFVPPLEPGLPPARGRREARAQPGQLALF
>CP018039.1|AUL02411.1|990498_991407_+|sulfate-adenylyltransferase-small-subunit
MSAVMTRSHLDWLESEAIFILREVAAECARPALLFSGGKDSVVLLRLAEKAFRPGRFPFPLLHIDTGHNYDEVISFRDARAAELGETLLVRSVEDSIARGSVALRRETDSRNAAQAVTLLEAIEELGLDACIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWNLFNTRVHRGENMWVFPISNWTELDVWQYIQRERLALPSIYYSHTREVVRRKGLLVPVTRLTPPAEGETVEQLAVRFRTVGDISCTCPVASDAADPAAIIAETAVTDITERGATRMDDQTSEASMERRKREGYF
>CP018039.1|AUK99851.1|988636_989701_+|sulfate-ABC-transporter-ATP-binding-protein
MSIEVRGLSKRFGAFRALDEVSLHIETGELVALLGPSGCGKTTLLRIIAGLESADAGSVLFAGEDATEVDVRQRQVGFVFQHYALFKHMTVFENVAFGLRVRHRSQRPSEARIRAKVLDLLGLVQLDWLADRYPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDELHVASVFVTHDQEEALEVTDRVVLMNAGRIEQVGSPREVWERPATPFVYGFLGDVNQLHGHATRGVWRLGEVALPAPDLPEADNQRAIAYVRPHDIDLARAGTAAPGIPVRLNHVYLAGPSAYLELARQDDQAIIEAQVPEPLFRSLGLKEGEALLAQPRRARVFAVQP
>CP018039.1|AUK99850.1|987829_988612_+|sulfate-ABC-transporter-permease-subunit-CysW
MFTEALRKGWQLYLAAIVEPDAWSAIRLTLLVAAIALPVNLVFGVAAAWAVTKFQFRGKQLLITLIDLPFSVSPVVAGMVFVLLFGSQGWFGPWLQDHDWKIVYAVPGVILATLFVTFPFIARELIPLMQAQGSEEEQAALTLGASGWQIFWRVTLPNIKWGLLYGAILCNARAMGEFGAVSVVSGQVRGLTNTMTLHVEILYNEYQFAAAFAVASLLALLALVTLAAKQVVEWRNQRLSPRQAEAPVHAGALAVRPAAA
>CP018039.1|AUK99849.1|987040_987715_+|sulfate-ABC-transporter-permease-subunit-CysT
MVASYRLTFGASLLAALVNLVFGTIVAWVLVRYRFPGKKIVDVLVDLPFALPTAVAGIALTALYSANGWLGAPLQRWFDLKVAFTPLGIVVALIFIGVPFVVRTVQPVLEDVERELEEAAASLGAGRWQTIRRVLLPALLPALLTGFALAFARAIGEYGSVVFIAGNMPMISEITPLLIISKLEQYDYAGAAAIATVMLALSFALLLVINLLQGWQTRRGGRQP
>CP018039.1|AUK99848.1|986815_987019_+|hypothetical-protein
MSLAIPSGPAPTAARRQRPGVLPGFGISMGYAVLYLSLLVLVLVLVLVLVPLAALPIKSLELGWAGF
>CP018039.1|AUK99847.1|985765_986800_+|sulfate-transporter-subunit
MPRNTAGIRGAIVALATVFSLGLPWAVQAQDKQTLLNVSYDPTRELYRAVDEAFIKEYQARAGVDLTVRQSHGGSGRQARSVIDGLDADVVTLALAYDIDAIADRGLLPQDWQKRLPRNSSPYTSTIVFLVRKGNPRQIHDWDDLVKDGVQVITPNPKTSGGARWNYLAAWAYALARNEGSEAKAREFVGQLLSHVPVLDTGARGSTTTFVERGVGDVLLAWENEAFLAREELGPDKFDIVVPSLSILAEPPVAVVDKVVDRKGTRAAAQAYLEYLYTPAAQEIIARNFYRPTDAGVAAKYASRFPKLKLVTIDDPIFGGWRKAQKDHFSDGGTFDQVYQPQRK
>CP018039.1|AUK99856.1|996518_997205_+|coenzyme-A-pyrophosphatase
MRPLFDPMAQPWETANQGLARVDERLLTPPELRSSLRPADHWRLDPLCAAEPRAPGREGSLVAAAVLIPLVMRADGVRVMLTQRAAHLHDHAGQVSFPGGRIEVSDATPVAAALREAQEETGLPVQQVEVLGSMPQYFTATGFAITPVVSLVQPDFELAPDAFEVAEVFEVPLSFLMDPANHRLYRAALPDGYVRQYYAMPWQRYFIWGATAGMLRNLYQTVREALPG
>CP018039.1|AUK99857.1|997300_998251_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP018039.1|AUK99858.1|998355_999405_+|aldo/keto-reductase
MKYRKLGHTDLDVSLIGLGTMTWGEQNTEAQAHEQLDYALAHGINLVDAAEMYPVPPKPETQGRTESCIGSWLARTGRRHEVVLASKAAGPVRDAKRPSHIRDGKTFLDRKNLTQALDASLKRLQTDYLDLYQLHWPDRTTNTFGKLAYPWVDDAHTVPIEETLEVLQDFVRAGKVRHVGLSNETPWGVARFLQAAEKHGLPKVATIQNPYNLLNRIFEIGLAEFSHREGVGLLAYSPLAMGILSGKYLDGARPEGSRLALFTRFTRYSNPQAEAAARDYVMLARDHGLAPAQMALAWVNQRPFVSSNLMGATTLAQLKENIESVEVTLSDEVLQGIEAIHARQPNPAP
>CP018039.1|AUK99859.1|999542_1000559_-|IS110-family-transposase
MADSSLLSAGGQVHVFIGIDVSKAKLDCTLLTAEADKCKTKVVVNTAAGVQALLAWCAKHGAQPAQLHAILEPTGLYHEQAATALPQVRVSLVNPAQARDFAKALALRSKNDALDSYVLARYGQTLSPALWHPAPLHARQLRALLTRREALSKDLLRELNRKEKSQFSPSAPLVDGSIDKAIAFLREQIKQIERAIDQHIDNHPDLKQDCELLNSIPAIGPQAGNAILAVMHNRHIDSAQSLAAYLGVVPVQRQSGSSLNSCARLSKAGPSQVRATLYMAALVGTRHNPHIRALYQRLLKAGKSKKAALGAAMRKLVHLCFGVLKNRIPYQPNYAMNG
>CP018039.1|AUK99860.1|1002067_1002640_-|chorismate--pyruvate-lyase
MTTPIPLARGWLPAAPSTLDPLRKYWLFRPGALTAGLRQLGHVRLRVLAEYPTGAPRDEADGMRIAAQSPVWVREVLMSIDGVDSVVARSLTPLRASHGVWQGMRRLLTRPLADMLYHDPGIHRSVFVCRRLAAGVPFHATAIARAPAGGPEPALWARRSAFWRAGQPLLVAECFLPAFWSLARAPVAPR
>CP018039.1|AUK99861.1|1002699_1003431_+|pseudouridylate-synthase
MEKVRISKLMSERGLCSRREADSYIERGWVRVDGVVVSELGARALPDQVITLERAAAARQTARVTILLHKPVGYVSGQAEKGYTPAVALIDARSRYAGDRAPQRFERGQLQGLAVAGRLDIDSQGLLVLTQDGRIAKKLIGEDSEVDKEYLVRVQGRLSEAGLALLNHGLSLDGKPLRPAQVRWQNADQLRFVLREGKKRQIRRMCELVGLRVVGLKRVRIGRVSLGDLPAGQWRYLRADERF
>CP018039.1|AUL02412.1|1003482_1004400_-|LysR-family-transcriptional-regulator
MELFVEVARTLSFGRAAENLAIPKSTLSRQVAELERSVGLRLLSRTTRRVELTEAGQLYFERCQRIVAEARIAHEELQNLVETPSGPLRVNMPADFGTDFLSEAFTEFSRRYPEVTFYLDLASPEHAERVFQTCDVSIEIGDLPDSTHIARLLGVLPAHLYASPDYLARHGEPQHPDDLPRHECIQFRAGTGRVTRWPLNSGERHVEITPGNRFSVNSVSMVRNLATLGAGIAILAPMGNVREDIESGRLKRILPDWLAGPFPVYAVTDTRMLPAKTRIFVEFLMERLSNKTLAGQNNPAFLNLR
>CP018039.1|AUK99862.1|1005207_1008387_+|multidrug-efflux-RND-transporter-permease
MAKFFIDRPVFAWVIAIVLMMAGALSILSLPVAQYPNIAPPAISINVTYPGASAQTVQDTVVQVIEQQMNGIDNLQYISSESNSDGSMSITLTFSQGTNPDTAQVQVQNKLAVAQPLLPLEVQQQGIRVTKATKNFLIVAGFVSTDGTMDKSDLADYVASYIQDPISRTPGVGNFQLFGAPYAMRIWISPEKLVNFGLTASDVTTAIREQNVQVSSGQLGGQPAVRGQQLNATVIGPSRLQTPEAFGRILLKVNRDGSQVRLKDVASIELGAQTYAIDSYYNGKPASGLAIKLASGANALDTAQAVRETINGLKPYFPPGMDVVYPYDTTPFVSLSIEGVVKTLFEAVLLVFLVMYLFLQNVRATLIPTLAVPVVLLGTFGVLAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLSPRQATRKSMGQITGALIGIAMVLAAVFVPMAFFGGSTGVIYRQFSITIVSSMVLSVVVAIVFTPALCATMLKPIPKGHHGSKKGFFGWFNRTFERSSQAYANNVARSMGRTKRLLLIYVVILLGMAWMFMRIPTAFLPDEDQGILFAQVQAPAGATSERTQATIDAAVKYLLEDEKESVASVFAVNGFSFGGRGQNAAILFIKLRDWNERKGAEHRAAAVAARANAKFRAELRDAQAAVFAPPAVMELGNATGFDFQLQDRAGVGHEKLLAARNQLLQEAGASPMLVAVRPNGIEDAPQYQLDIDREKARALGVSITEINNTLATAWGSSYVNDFIDRGRVKKVFVQGEASSRMLPQDLDKWYVRNNAGDMVPFSAFSSAQWTFGPQKLNRYNGVPSYNIQGQAAPGYSSGDAMAEMERLADKLPLGIGYDWTGLSFEERLSGAQAPALYAISLIVVFLCLAALYESWSIPTAVMLVVPLGVVGALLATMTRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKEHYEEGASLTEAAVHAARQRLRPILMTSLAFILGVVPLAISTGAGSGSQNAIGTGVIGGMLTGTFLAIFFVPLFFVLTLRLFKVKRASENREDDDPHGGAQPATHGGQPQ
>CP018039.1|AUK99863.1|1008383_1009766_+|multidrug-transporter
MKPVVMRTLLSLAVATALAGCSLAPTYERPQAPVDAAYPSGPAYGAPGQAAAGAPAAADVGWRDFFGDPLLQELLALSLANNRDLRVAALNVEAARLNPSGQAGISRSYQVGASLSTWELDLFGRIRSLSEQALQLYLAQDETRLATQLTLVAETANAYLTLRADQELLALTRQTLAAQQESYKLTRQSYDLGVATELDLSQAEISLRTAERNLSQYTRMAAQDRNALVLLVGQPLPAGIGAQLDQAVALPDGVVLADLPAGLPSDLLARRPDIRAAEHQLQAANASIGAARAAFFPRISLTGSAGTASASLGGLFDAGSGAWSFAPQISVPIFAGGALRASLDLAKIQKDIGIARYEQAIQSGFREVSDALAGRGTLQEQIRSQELLVQANQRAYDLSQQRYQQGIDNYLSVLDSQRSLYTAQQTLVETRLARLSNLIQLYKALGGGWSERTVAAAQAG
>CP018039.1|AUK99864.1|1009835_1010087_-|hypothetical-protein
MNIIIMIIVGFVVGLITRAIMPGDQNMGYIMTTILGIIGSVVAGFLGQQLGWYAPGEPAGWIGSVVGAIIVLFVVGLVAKKRA

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Crispr_ID: CP018039_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018039_4

1819234-1819361

Orphan

Consensus_repeat	Method
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP018039_4

>merge|CP018039|4|1819234-1819361|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCGTGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGCAAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

>CP018039|4|4|1819234-1819361|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	TGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGC
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP018039.1\|AUL00495.1\|1813248_1815234_-\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	unknown	unknown	gnl\|CDD\|274868
CP018039.1\|AUL00494.1\|1811137_1813243_-\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	unknown	unknown	gnl\|CDD\|274867
CP018039.1\|AUL00502.1\|1820163_1821366_-\|aromatic-amino-acid-aminotransferase	unknown	unknown	gnl\|CDD\|181731
CP018039.1\|AUL00498.1\|1816876_1817827_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018039.1\|AUL00500.1\|1818228_1819158_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|273608
CP018039.1\|AUL00508.1\|1826630_1826954_+\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|213674
CP018039.1\|AUL00496.1\|1815442_1815679_+\|hypothetical-protein	unknown	unknown	unknown
CP018039.1\|AUL00501.1\|1819384_1820035_-\|repressor-LexA	unknown	unknown	gnl\|CDD\|234688
CP018039.1\|AUL00510.1\|1827598_1829461_+\|Fe-S-protein-assembly-chaperone-HscA	unknown	unknown	gnl\|CDD\|235360
CP018039.1\|AUL00509.1\|1826956_1827469_+\|Fe-S-protein-assembly-co-chaperone-HscB	unknown	unknown	gnl\|CDD\|235133
CP018039.1\|AUL00493.1\|1809874_1811134_-\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	unknown	unknown	gnl\|CDD\|236882
CP018039.1\|AUL00499.1\|1817823_1818183_-\|hypothetical-protein	unknown	unknown	unknown
CP018039.1\|AUL00507.1\|1826218_1826629_+\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087
CP018039.1\|AUL00503.1\|1821443_1823480_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
CP018039.1\|AUL00504.1\|1823732_1824224_+\|protein-tyrosine-phosphatase	unknown	unknown	gnl\|CDD\|319971
CP018039.1\|AUL00506.1\|1824969_1826181_+\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450
CP018039.1\|AUL00505.1\|1824439_1824952_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|273927
CP018039.1\|AUL00491.1\|1808138_1809251_+\|alkene-reductase	unknown	unknown	gnl\|CDD\|239243
CP018039.1\|AUL00492.1\|1809255_1809894_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372868
CP018039.1\|AUL00497.1\|1816023_1816509_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759

Protein	Function_ID	Function_description	E-value
CP018039.1\|AUL00495.1\|1813248_1815234_-\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	gnl\|CDD\|274868	TIGR03939, PGA_TPR_OMP, poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA. Members of this protein family are the poly-beta-1,6 N-acetyl-D-glucosamine (PGA) export porin PgaA of Gram-negative bacteria. There is no counterpart in the poly-beta-1,6 N-acetyl-D-glucosamine biosynthesis systems of Gram-positive bacteria such as Staphylococcus epidermidis. The PGA polysaccharide adhesin is a critical determinant of biofilm formation. The conserved C-terminal domain of this outer membrane protein is preceded by a variable number of TPR repeats.	1.10027e-119
CP018039.1\|AUL00494.1\|1811137_1813243_-\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	gnl\|CDD\|274867	TIGR03938, hypothetical_protein_Pcar_2791, poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB. Two well-characterized systems produce polysaccharide based on N-acetyl-D-glucosamine in straight chains with beta-1,6 linkages. These are encoded by the icaADBC operon in Staphylococcus species, where the system is designated polysaccharide intercellular adhesin (PIA), and the pgaABCD operon in Gram-negative bacteria such as E. coli. Both systems include a putative polysaccharide deacetylase. The PgaB protein, described here, contains an additional domain lacking from its Gram-positive counterpart IcaB (TIGR03933). Deacetylation by this protein appears necessary to allow export through the porin PgaA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
CP018039.1\|AUL00498.1\|1816876_1817827_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP018039.1\|AUL00500.1\|1818228_1819158_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	gnl\|CDD\|273608	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain. A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	4.98806e-78
CP018039.1\|AUL00508.1\|1826630_1826954_+\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|213674	TIGR02011, Protein_yfhF., iron-sulfur cluster assembly protein IscA. This model represents the IscA component of the ISC system for iron-sulfur cluster assembly. The ISC system consists of IscRASU, HscAB and an Isc-specific ferredoxin. IscA previously was believed to act as a scaffold and now is seen as an iron donor protein. This clade is limited to the proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	4.04388e-54
CP018039.1\|AUL00492.1\|1809255_1809894_-\|hypothetical-protein	gnl\|CDD\|372868	pfam13994, PgaD, PgaD-like protein. This family includes the PgaD protein from E. coli. The homopolymer poly-beta-1,6-N-acetyl-D-glucosamine (beta-1,6-GlcNAc; PGA) serves as an adhesin for the maintenance of biofilm structural stability in eubacteria. The pgaABCD operon is required for its synthesis and export. It has been shown that PgaD is essential for this process.	0.00341018
CP018039.1\|AUL00501.1\|1819384_1820035_-\|repressor-LexA	gnl\|CDD\|234688	PRK00215, PRK00215, transcriptional repressor LexA.	1.25833e-105
CP018039.1\|AUL00510.1\|1827598_1829461_+\|Fe-S-protein-assembly-chaperone-HscA	gnl\|CDD\|235360	PRK05183, hscA, chaperone protein HscA; Provisional.	0
CP018039.1\|AUL00509.1\|1826956_1827469_+\|Fe-S-protein-assembly-co-chaperone-HscB	gnl\|CDD\|235133	PRK03578, hscB, Fe-S protein assembly co-chaperone HscB.	2.55481e-79
CP018039.1\|AUL00493.1\|1809874_1811134_-\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	gnl\|CDD\|236882	PRK11204, PRK11204, N-glycosyltransferase; Provisional.	0
CP018039.1\|AUL00507.1\|1826218_1826629_+\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	5.84746e-99
CP018039.1\|AUL00503.1\|1821443_1823480_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP018039.1\|AUL00504.1\|1823732_1824224_+\|protein-tyrosine-phosphatase	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	1.04407e-74
CP018039.1\|AUL00506.1\|1824969_1826181_+\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
CP018039.1\|AUL00505.1\|1824439_1824952_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|273927	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR. This model describes IscR, an iron-sulfur binding transcription factor of the ISC iron-sulfur cluster assembly system. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Regulatory functions, DNA interactions].	1.00126e-77
CP018039.1\|AUL00491.1\|1808138_1809251_+\|alkene-reductase	gnl\|CDD\|239243	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.	0
CP018039.1\|AUL00502.1\|1820163_1821366_-\|aromatic-amino-acid-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
CP018039.1\|AUL00497.1\|1816023_1816509_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	7.77331e-19

>CP018039.1|AUL00500.1|1818228_1819158_+|autotransporter-outer-membrane-beta-barrel-domain-containing-protein
MPRSGILTAPVLAVLGTASAPQGIWQAEMNALSKRMGELRLTPAAGGVWARSFAQRQRLDNQVVDRFTQTVGGIEIGADTALPAAEGRWHVGAVAGYSRARRKLAHSARGNSDSLHVGAYATYIGDGGFYLDGIVRVNRYEHDFRADGQRGARVTGKYRANGIGLSLETGRRFTWAGDWFVEPQVEVALFRSGGADYTASNGVRVDVASTKSLLGRAGLQVGRKLDLGNGKLVQPYAKLSWLQEFDGVGKVRTNDIGHDVKLRGGRAELDLGVAAALGRHSSLFASYEYSKGSRLTIPWSFHVGYRYAW
>CP018039.1|AUL00499.1|1817823_1818183_-|hypothetical-protein
MRLVLRPGSRLGARLPLRTRFRLRSGFHPRPGFHLSSGLCIGLGIGIGRGQALRPLLGRVGPRLRRLFGRRRQPAVLAIDGSAVQLGTRNIDVGPAIVDGRAIEIYRCPAVFIVDGPAI
>CP018039.1|AUL00498.1|1816876_1817827_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP018039.1|AUL00497.1|1816023_1816509_+|MarR-family-transcriptional-regulator
MPASQDKPDVPPGPYHFSEQVGHLLRRAYQRHVAIFQQTIPDSKLTAAQFVVLCALRDQGACSLVDVVKATAIDQATVRGVIERLKARKLLAVSHDPADRRKVLVTLTPDGRALVEEMVPFAEQITQSTFGGLNPAERVAIVYLLRKMSDADDLVGRQSES
>CP018039.1|AUL00496.1|1815442_1815679_+|hypothetical-protein
MRRAAKWWGPAATWTLAALLVLLVGHGVVPEAARVSDAPLLHAMAGHAYLLNWAAGLMALIGWGDSLVLYRRTRRRAV
>CP018039.1|AUL00495.1|1813248_1815234_-|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA
MNNDQTRRTRPASVRGLRRTRLLVAGLAFVGAAAAAAPSVRDQVQEASRSGAANLALDLATEHRALFTPLEYAQLQHAAIAQRLRWSRAETWNLTGPERFATLDAALADGWQLLDSLPLAPEYASLRTAVISDMIYGLGLRGRYADAIKLYEGLRATNTPVHPYVLVSAGNAYAYEERYDEAIVCYEEALAKAGPGDIDRVPTQESLFFAYMDRGRYEDAEQLLQRIEKTSPQYVENAPVAERPNEDYATAQRLRAQYLMYSGETEAGTLAIDALQHDAPFSSGLRNAAASARLGDARPREAKAAFTTALAERPDDIQAMTGLARASMALREYPEAEAIVTTLSERFPESSSVRNLQRDYEVYQSPLLTMDFGGDIGHGGDNSNNDNSTIANREWSLNTMLYTSPISHNYRLFFHQFTGYADLGDGHKSRVRNGAGLEYRRGSIEASTELHQSTGPSGRFGASANVAWLPSDGWRLAANFDSDSNDLPWKAYRAGIHGWSSGVSARYQPTERTYYDVAYQLQHYSDSNTRQTIGATWFQNLWTVPRHSVSTWTSVAYSNNSKTDTECFSPDHDLTAQVTAMYEWRPWRDGQYAFRQRVYATGGVYNQAEHGNSALWQLRLEQVWDLPRQTSITYGVGYGRHSYDGDPENRTLFYLTLNIPF
>CP018039.1|AUL00494.1|1811137_1813243_-|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB
MTAMHRTLLKWFACCALGLLMLPARAYKVDMLPPPDPDDGLTFRVLCMHDVRDNLRASFADMPDQFAIETRTLTDLFEWIRVKGFNLISMQQIIDSRAGVRPLPPRPILLTFDDGYASTYTKVFPLLKKFNYPAVVAVVTSWTDAPAGTKIRLSPKIEVPHDFFMTWAQLREMAQSGLVELASHSHNLHRGVLANPQGNEQPAASSRQYLPASGRYENDAEYRARVRQDLKTSADLIREHTGVTIRSIVWPYGAHNRDTDQVAAEVGLNIGLTLQPGPNTPDVSLTQIRRSLVDYEVNVATVARAMREPVSYHGQVRPIERIVQVDLDYIYDPDPEQQNRNLGQLIDRMKDLAPSAVYLQAFAYPKGDGDITEVYFPNRHLPMRADLFNRVAWQLKTRAGVMVYAWLPVLTFSVPPGNPAYGKVVQSTTRKPGERGLGSPTRLSPFHPDAHRVISEIYEDLAKAAHFDGLLFHDDAVLDDTEDSSPEALATYQGWGLPPDIAAIRADPKLAQQWSKGKIRYLIDFTMHLRHIVSGYQNDRDMVVARNLYAQPVLDPVSEAWYGQSLPEFLKSYDFVALMAMPNMEGAARPEQWMRQLVAAVARQKGLDRTIFELQARDWRVGKPIDTEILRKQMVQLRSLGAINYGYYPDDFIANHPDAEVLRDVMSLKSTLEKRRLTKAQELSRQTTLYGSASQAEPTQR
>CP018039.1|AUL00493.1|1809874_1811134_-|poly-beta-1,6-N-acetyl-D-glucosamine-synthase
MNDSVKSVLSSFVFYYPFFMSYFWIVGGLLHFFLFEQGRKHRATLLPRVPRVAIVVPCYNEGENVAEVIAHLDRMHYPNYRIIAVNDGSRDNTGALLNELAEQYPRLLVVHQSRNEGKAIGLNTAAQLSDAEFLLCIDGDSLPHPDSITYMLTHFLHAGHVGAVTGNPRIRNRSTVLGRMQVGEFSSIVGLIKRTQQLYGKLMTVSGVMTMFRKQALHQVGYWSPDMQTEDIDISWKLQLAGWTLRYEPRALTWILMPETFRGLFKQRYRWARGGIETALKYAPRMLNPRQILMWPIFLEFSLSVLWAYAMLFLICMAVLGQFVALPPAWQFEIFPRWHGTLLFLTCLAQLFAGCIVDRAYDYRIFRYFADAVWYPIAFWIIGMITTVFALPRVLFRRAQSRARWVSPDRGIKHESVDH
>CP018039.1|AUL00492.1|1809255_1809894_-|hypothetical-protein
MKALIIDISASPLREYVHQHGVADGLLYGCWYRIVRPLLVILTWVAFSLYIHHSLVTVGGTAAQIAELLVYITVVATMAAALTAWMIVCRFHGWIRARDNEEVGVGLDPEYALPPRWPLPEGANRLLVDHDEAGAIVQVSAWYVPAAIEPVVAAAMASAVMPEAAPLSEPAPVAAALPDEADELAAWSGPPMQRQPDGRIEPTLHDGRALTL
>CP018039.1|AUL00491.1|1808138_1809251_+|alkene-reductase
MSTLFQPLNAGKLRLANRIVMAPLTRNRSPNAVPPPLTATYYAQRASAGLIITEATAISHQGQGYADVPGLYAPEQLAGWRRVTDAVHAAGGTIVVQLWHVGRISHTTLQPGQGAPVAPSAIRAQARTYLVDAQGKGQFADTSEPRALALDELPGIVEDYRRAARAAIDHGFDGVELHAANGYLLDQFLRSGSNHRDDAYGGSIENRARLLLRALDAVCAEVGADRVGIRLSPVTPANDAHDDQPQPLFEYVLRELARRGLAYVHVIEGATGGDRAYQQGPAPFDYAALKAAYRAAGGAGAWMVNNGYDISLAEQKLSSGQADLVAFGKPFIANPDLVARLRQGAALNEGDRDTFYGGGERGYTDYPALA
>CP018039.1|AUL00501.1|1819384_1820035_-|repressor-LexA
MATKLTERQQEILDLIRQTVARTGFPPTRAEIAQALGFRSPNAAEDHLKALARKGAIELTAGASRGIRLKVPDSATPSAQLTHPLLAQLVLPLVGRVAAGSPILASEHVEREVGVDPGLFAQTPDYLLKVRGMSMRDAGILEGDLLAVKRAAEARNGQIVVARLGDEVTVKRLQRQNGRIELLPENPDFAPIVVANTDEFALEGIAVGLIRTQPLH
>CP018039.1|AUL00502.1|1820163_1821366_-|aromatic-amino-acid-aminotransferase
MSTLFASVELAPRDPILGLNEQYNADTRPGKVNLGVGVYYDDEGRIPLLQAVRKAEVARIEAAAARGYLPIEGIAGYNKGAQALLLGADSPLAAEGRVLTAQALGGTGALKIGADFLRQLLPQSKVLISDPSWENHRALFERAGFPVETYAYYDAATHGLNFEAMLAALQAAPEQTIVVLHACCHNPTGVDPTPQQWEQIAAVVKARNLVPFLDIAYQGFGEGLEQDAAVVRMFAELDLTMFISSSFSKSFSLYGERVGALTVVAGSKDEAARVLSQLKRVIRTNYSNPPTHGGTVVSTVLNTPELFALWENELAGMRDRIRLMRKELVEKIKTQGVAQDFSFVLAQRGMFSYSGLTAAQVDRLREEHGIYAVSSGRICVAALNSRNIDAVAAGIAAVLK
>CP018039.1|AUL00503.1|1821443_1823480_+|excinuclease-ABC-subunit-B
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVTGSGKTYTMANMIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRTGDRISRREVLARLVAMQYTRNDADFTRGVFRVRCETIDIFPAESPELALRLTLFDDEIESLELFDPLTGRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMYRGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHADNVVEQVVRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVLVTTLTKRMAEDLTDFLSEHGVRVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKAVRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNLEFEQAAAARDALNALKSRLLLDGVGWSG
>CP018039.1|AUL00504.1|1823732_1824224_+|protein-tyrosine-phosphatase
MMTKVLFVCMGNICRSPSAEGVFRYLVNDAGMGDVVRVDSAGTHAFHIGEAPDARAQAAARKRGYDLTHCAARQVTADDFREFDLILAMDWDNLAALQQQCPKAYQHKLMLLMRFANEFEEATVPDPYYGGPEGFGKVLDYLEDACQGVLELVRKRATQYQAA
>CP018039.1|AUL00505.1|1824439_1824952_+|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MRLTTKGRFAVTAMIDLAMRQHSGPVTLAAISQRQNISLSYLEQLFGKLRRHELVDSVRGPGGGYSLARLARNVTVADIIFAVDEPLDATSCGGKRDCTSGNDGKPGKCMTHELWTTLNRKMVDYLDSVSLQDLVDQQRVRQLQEAANQAQGCSAVRVNRSTPVAANATA
>CP018039.1|AUL00506.1|1824969_1826181_+|IscS-subfamily-cysteine-desulfurase
MSNRPIYLDYSATTPVDPSVVEKMIPWLYESFGNPASRSHAFGWEAEDAVEKAREEVAKLVNADPREIVWTSGATESDNLAIKGAANFYAERGKHIITVKTEHKAVLDTCRELERQGFEVTYLDVQDDGLLSLDAFKAALRPDTILVSVMMVNNEIGVIQDIAALGEICREKGIIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRVRIEAQMHGGGHERGFRSGTLATHQIVGMGEAFRLAREEMGTENERVRMLRDRLLAGLTQIEEVYVNGSMEHRVPHNLNISFNYVEGESLIMAIKELAVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTLGRFTTEQEIDFTIELIKSRVGKLRDMSPLWEMAQEGIDLNSVQWAAH
>CP018039.1|AUL00507.1|1826218_1826629_+|Fe-S-cluster-assembly-scaffold-IscU
MAYSSKVLDHYENPRNVGSFDKGDDSVGTGMVGAPACGDVMKLQIKVNEAGVIEDARFKTYGCGSAIASSSLVTEWVKGKTLDEAMNIRNTQIAEELALPPVKIHCSILAEDAIKAAVQDYKTKHGAETPEAVAAN
>CP018039.1|AUL00508.1|1826630_1826954_+|iron-sulfur-cluster-assembly-protein-IscA
MAVTLTQSAANHVGRYLQKRGKGIGLRLGVRTTGCSGMAYKLEYVDEQAADDVVFDSFGVKVFIDPKSLAYLDGTELDYAREGLNEGFRFSNPNEKATCGCGESFTV
>CP018039.1|AUL00509.1|1826956_1827469_+|Fe-S-protein-assembly-co-chaperone-HscB
MAADDHFSLFGLPTRFALDPVQLEQAWRAVAARVHPDRYATASAAERRVAMQWAARANEAYRQLRDPMLRARYLCEQAGVDLQTESNTAMDPAFLMQQMEWREMLDDARRDPAAFAALRAELEQARLRMQQTLSELIDERGDYQQAGTKVREWMFVEKLAQELSAAQPMQ
>CP018039.1|AUL00510.1|1827598_1829461_+|Fe-S-protein-assembly-chaperone-HscA
MALLQISEPGDSPAPHQRKLAVGIDLGTTNSLVAAVRSSVPEVLADAQGQVLLPSAVRYLDGGAVRIGREALLEQARDPLNTIVSVKRFMGRSAADAAASGAPYEFVDAPGMVRLRTVQGDLSPVEVSAQILAVLRQRAEDVLGDDLVGAVITVPAYFDDAQRQATRDAARLAGLNVLRLLNEPTAAAIAYGLDQAAEGIYAVYDLGGGTFDISILRLTQGVFEVIATGGDTALGGDDFDSAIVAHACAGEDVAALPVADRRALLVAARAAREALTDQAQAPFEVTLRDGRAIQATLTRAQFEQLAEPLVGRTLDSARRALRDAGLAVGDVRGVVMVGGATRMPVVRQQVGALFGTEPLTNLDPDQVVALGAALQANLLAGNRALGEDWLLLDVIPLSLGLETMGGLVERIIPRNSTIPVARAQEFTTFKDGQTAMSVHVVQGERDLVSDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLSVTAREQSTGVEAAVAVKPSYGLSDDEIARMLADSVTQADSDARARMLREQQVEARQLVESVGAALAADGDLLDPAERATVDQRLQAAAQAQSLDDVEAVRAAVQALSDATEEFAARRMDRSIRSALAGRKLDELA

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Crispr_ID: CP018039_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018039_5

3433971-3434080

Orphan

Consensus_repeat	Method
TTGACTGCCAAGACGGTATCTGTCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP018039_5

>merge|CP018039|5|3433971-3434080|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCCGCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGCTTGACGGCCAAGACGGTATCTGTCCCC

>CP018039|5|5|3433971-3434080|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCC	GCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGC
TTGACGGCCAAGACGGTATCTGTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP018039.1\|AUL02571.1\|3435296_3436268_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP018039.1\|AUL01778.1\|3427369_3428320_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018039.1\|AUL01780.1\|3428826_3429597_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
CP018039.1\|AUL01781.1\|3429617_3430418_+\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
CP018039.1\|AUL01793.1\|3445343_3446222_+\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|178806
CP018039.1\|AUL01788.1\|3438818_3439520_+\|two-component-system-response-regulator-OmpR	unknown	unknown	gnl\|CDD\|181883
CP018039.1\|AUL01779.1\|3428316_3428784_-\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
CP018039.1\|AUL01776.1\|3425456_3425789_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235866
CP018039.1\|AUL01792.1\|3443468_3445232_+\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP018039.1\|AUL01791.1\|3442012_3443353_-\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
CP018039.1\|AUL01786.1\|3434611_3435292_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377342
CP018039.1\|AUL01782.1\|3430428_3431838_+\|lytic-transglycosylase	unknown	unknown	gnl\|CDD\|182727
CP018039.1\|AUL01790.1\|3440960_3442016_-\|cytochrome-oxidase	unknown	unknown	gnl\|CDD\|376764
CP018039.1\|AUL01774.1\|3420637_3423616_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375438
CP018039.1\|AUL01789.1\|3439519_3440944_+\|ATPase	unknown	unknown	gnl\|CDD\|236531
CP018039.1\|AUL01783.1\|3431932_3432718_+\|enoyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|180789
CP018039.1\|AUL01775.1\|3424542_3425421_+\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126
CP018039.1\|AUL01777.1\|3425767_3427288_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235866
CP018039.1\|AUL01787.1\|3436363_3437266_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018039.1\|AUL01785.1\|3434081_3434474_-\|osmotically-inducible-protein-OsmC	unknown	unknown	gnl\|CDD\|224679

Protein	Function_ID	Function_description	E-value
CP018039.1\|AUL02571.1\|3435296_3436268_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	2.71001e-129
CP018039.1\|AUL01778.1\|3427369_3428320_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23
CP018039.1\|AUL01780.1\|3428826_3429597_-\|SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.0439e-10
CP018039.1\|AUL01781.1\|3429617_3430418_+\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	2.85848e-146
CP018039.1\|AUL01793.1\|3445343_3446222_+\|septum-site-determining-protein-MinC	gnl\|CDD\|178806	PRK00030, minC, septum site-determining protein MinC.	3.47756e-166
CP018039.1\|AUL01788.1\|3438818_3439520_+\|two-component-system-response-regulator-OmpR	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.05363e-90
CP018039.1\|AUL01779.1\|3428316_3428784_-\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.07937e-102
CP018039.1\|AUL01776.1\|3425456_3425789_+\|hypothetical-protein	gnl\|CDD\|235866	PRK06816, PRK06816, StlD/DarB family beta-ketosynthase.	8.20524e-38
CP018039.1\|AUL01792.1\|3443468_3445232_+\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP018039.1\|AUL01791.1\|3442012_3443353_-\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.21087e-123
CP018039.1\|AUL01786.1\|3434611_3435292_+\|hypothetical-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	5.6465e-62
CP018039.1\|AUL01782.1\|3430428_3431838_+\|lytic-transglycosylase	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	5.28635e-76
CP018039.1\|AUL01790.1\|3440960_3442016_-\|cytochrome-oxidase	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	1.57809e-49
CP018039.1\|AUL01774.1\|3420637_3423616_+\|hypothetical-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.32844e-07
CP018039.1\|AUL01789.1\|3439519_3440944_+\|ATPase	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.78414e-42
CP018039.1\|AUL01783.1\|3431932_3432718_+\|enoyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|180789	PRK06997, PRK06997, enoyl-[acyl-carrier-protein] reductase FabI.	1.22848e-177
CP018039.1\|AUL01775.1\|3424542_3425421_+\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	2.20669e-12
CP018039.1\|AUL01777.1\|3425767_3427288_+\|hypothetical-protein	gnl\|CDD\|235866	PRK06816, PRK06816, StlD/DarB family beta-ketosynthase.	1.80369e-130
CP018039.1\|AUL01787.1\|3436363_3437266_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	4.1334e-23
CP018039.1\|AUL01785.1\|3434081_3434474_-\|osmotically-inducible-protein-OsmC	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	4.86152e-16

>CP018039.1|AUL01783.1|3431932_3432718_+|enoyl-[acyl-carrier-protein]-reductase
MGFLAGKRILMTGVLSNRSIAYGIARACRDQGADLAFTYVGDRFKERITEFAASFGSDIVLPCDVAEDSQIDAAFAELGKRWDGLDGLVHAIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPAMAKAALPLMEGRKGSVLTLSYLGSERVVANYNTMGLAKASLEASVRYLATALGPRGIRANAISAGPIKTLAASGIKDFSSILKFVEANAPLRRNVTIEDVGNVAAFMLSDLAAGITGEITHVDAGFSTVVPGMEN
>CP018039.1|AUL01782.1|3430428_3431838_+|lytic-transglycosylase
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRGFAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVESAYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKFAVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLLPADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVAADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
>CP018039.1|AUL01781.1|3429617_3430418_+|hydroxyacylglutathione-hydrolase
MQTAPPLSAVVPLPAFSDNYIWALAHEGQAAVVDPGDAAPVLRWLRATGATLRAILLTHHHPDHVGGVLELVQATGATVYGPAGETLPHCDVRLAEGDRVTLPELALALEVLDVPGHTAGHIAYTGRAAGVERVLFCGDTLFAGGCGRLFEGTPAQMLDSLEKLSALPADTQVCCAHEYTLANLRWALAVEPANRTLQQWYQRAQELRNEGTPTLPSTIGQERETNPFLRTPHAAVAHAAAVWSGRSLATPVEVFAALRQWKNNFK
>CP018039.1|AUL01780.1|3428826_3429597_-|SAM-dependent-methyltransferase
MAEETPPIVELAEWFQTPPGQYVLAWEQAQFDEAVADIFGYYAWQVGLAEPNLLRANRMPFKAWVGAGVPPPELAQGWQACVAAAPEALPFESQSVDLLVLPHAFECAEAPHLVLREVERVLVPEGRVVISGFNPWSLWGARNLMPGMEAWLPLPLSAQVALPRLKDWFKLLSFEVERGRFGCYAPACRTDKWLRRWRFMERYGQRWWGLGGAVYVVTATKKVAAMRLIGPAWKTRRKRAQAASVVVNRQADDPGR
>CP018039.1|AUL01779.1|3428316_3428784_-|ribonuclease-HI
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR
>CP018039.1|AUL01778.1|3427369_3428320_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP018039.1|AUL01777.1|3425767_3427288_+|hypothetical-protein
MPGFANMIQGELSAAPLETLSVHGICAAGVGAIQAAAQGIELGAHRRALAVASELPSRLFKRSRFAAPGYDAHFLRWMLSDGAGAMLLGDASQPLAGAANGVRLRLKWIHQRSFSGDYPVCMQLGQSAGGQAHLDYGSWSEAEAAGALLLRQDILLLPHLFDIGIHEYAKLVHDGWVDPRQVSHFLCHYSSEKFIPVVEDLMDKAGLAIARERWFSNLAWRGNTGAASILIMLAEFLQTRTVQPGEQIFCYIPESGRFMAAYMLLQAEGPDETAQPARARAVPAAAPAGEADFIAPPHDPAHAPQGLEPLLGELAAIITKGSIFFRAWTLSVRLPAREALRIAWTRGAGAGWTHGPRHLAGSWELRRGALGKGAMPDHNTAQRRTPNAASRRQIHVRHRRRYRHGVRLHHRGRRLGRLRAGQSPVGRSIRACAVAGSRRRRFLALDPHPGRLPVLHRQPAHRLVLSHPGRSGSERAQPGLSARPRAGRQLPHQRHNLHARLAVKIQ
>CP018039.1|AUL01776.1|3425456_3425789_+|hypothetical-protein
MPVAFDRVYLHSAGYFMPGEPVDNDAMDQYIAPLNRISGRIKNRILAENGIRQRYYAIDPEGRTRWSNAQLAAQAIQACLARGATSTCHRSRCWPAARRAAIRSCPGSPT
>CP018039.1|AUL01775.1|3424542_3425421_+|fatty-acid-desaturase
MVRPAEWLRHRRDWQSVLYLAALPALAAWQWVHGWHWALYAPMLFLTLGVGVIHHNHAHRRMWRPRWLNRLTDFWLTLLQGHPTFVFHAAHNANHHRYKHGPRDVARTYRFGGDTNHLAGYLLHPLQAVVVLYPLFLASLRRLRSRRPGVWRYCLRQYAAWLGLWGGLLALDPGKAFWLVIVPQLHGLHWLLATNYLQHAHADGGPGRHAALSYARNFEGWVNPLLFNIGLHTAHHENPRAHWSELRALHWQHYRDRVPSRLNERGLAPYMARVFVLGLFSRRCRTHTLMRP
>CP018039.1|AUL01774.1|3420637_3423616_+|hypothetical-protein
MQLWLPDGTATSVRANAAGGFEASSAGDMTSGLIRARATDRYGDTSQEVTYAYTDTVDKTAPVLSIAGVATDEATGRVTVTGRSEPDAQVTIRFPGGGRKTVRADANGAYRVRSDGDLPAGVIVVQAADAAGNSTQAQQAYQDTVDRTAPEPVQIALDTDAATGRLTVSGQAEPGGSVTVTWPDGTTQTVRVDADGGFRVTSAGDAAQGDVVVVVADQAGNRAAPVRAHYADPVDRTAPMTPTVRHATDAQTGRVTVMGRTEAGALVTVQFPDGSSKTVRAQNDGGYAATSDTDMVSGPIVVSAGDADGNRTPAQQVMYTDTLDKTAPASPSLTVREDAASGRATVTGQAEPGAAVRVVFPNGEAQTVTAGSDGAYSVTSTADMVAGEITVVAADASGNQSAPARTVFADAVDKTAPAAPTLALSEAADSGRLTVSGRTEPGASVRVTFPDGETVTVTAKADGTYTATSRADMIGGNVTVVATDTAGNAAAPVRAAYADTVDRTPPVLDTPVLNVASDSGRVTVTGVTEPGARVQVAIPGESLQTVTADSAGRYRAVSPGDVLQSGTVRVIATDAHGNASAPRDVPYQDAVDRTAPPLTIEAAVEQARTGVVNVSGKTEPNLMVSATFPDGQTAQARADGQGRYQLASPADVARSGRIAVSASDAAGNRAAARAEFTDQVDKTAPAVTIRAVTEQAGTGVATVSGATEPGATVSVTFPDGQVARATADRSGAYTVHSARDVTARGNISVIATDAAGNASPSVSRQFSNTVADTVPPSLTIAMVTTDPGNGRITVSGVTEAGARVHVVFPGGASDTVTADSKGGYRATSAGDVGSGAVTAQATDASANRSPLKTYAYTDAWQPRQLSAKDFSQSRYFVPLTTRGGTDNEPLLRITTNQQIPTAELRVALKPYKTEDRAGRLVREAITLKWGNAPGVGGDARALHFYVPDSAKAKLRKELTEVERSNDYKFWIEFTDTRFGGVARLYIKVISTL
>CP018039.1|AUL01785.1|3434081_3434474_-|osmotically-inducible-protein-OsmC
MTIQVRANTPGGLQYTATAEGHELPLAMPQPQGEGPDPHDYFDTALGGCKALTLMVYAQRKGLPLQAVDVDVVRDASEERKGIYRLTAKLKLHGDLDDAQIDELLKVADKCPLHKLMTATDIQVSTIVVE
>CP018039.1|AUL01786.1|3434611_3435292_+|hypothetical-protein
MSARQLLDQLLQSGQSLMQGAGAQAQQATQGGKGTFLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMAALGALAYRAYDQYQRNQAGGAAAPAPQTLDRLPPAPAEQHSNAVLVAMIGAAKADGHIGPDERQLLETELAKLSGDAGDRAWLEAELARPLDPAVIAQQARTPEMGAEMYLASLLVADEQSFMERAYLDELARQLKLPAELKQQLEAQVPAAA
>CP018039.1|AUL02571.1|3435296_3436268_-|ABC-transporter-substrate-binding-protein
MKSQVSILLAGCLLGAGAAAAQAPATYPDHAITIVVTFPPGGGTDLLARKLGAAMQQRLGQPVVVENRPGASGNIGARAVAEARPDGYTLLMVNSSFAVNPGVFRNLDFSPTRDFTAVINVAYVPSVIVTAEPAGDAGLPERLRQADTQSRTLAFASCGNGTPQHLAGEMLRQASGAWLQHVPYRGCGPALTDVLSRQVPLGIVTASSAAPFIHAGKLRALAVTSAQRSPLLPDVPTVAEQGAPGYELDQWHGLLAPAGTPPAVIQRLYEALSAIVAEPAMRRELESLGFNPVSEGPERFEALVQADIARFAALTARMGLRAD
>CP018039.1|AUL01787.1|3436363_3437266_-|IS481-family-transposase
MVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWQRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP018039.1|AUL01788.1|3438818_3439520_+|two-component-system-response-regulator-OmpR
MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARITRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGEINLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQTVWGIGYRFSP
>CP018039.1|AUL01789.1|3439519_3440944_+|ATPase
MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMEDVAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQEDEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAPSPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLADAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMAVLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSGGLLVRITLPLAKA
>CP018039.1|AUL01790.1|3440960_3442016_-|cytochrome-oxidase
MIATLAASLGLSPDDPSFWMPLVFVGLLLLLMAAGIVLDGFDIGVGLLLQLAPSEERGRMMGLLSPWRDANEFWPLLGLGLFVSAFPFAWGGVLGKLFGPLTVMALGMVLRSVSFEFRIRARTEIKPRWIFGFWVGSLLTALGQGMVLGRIATDYQADSGYGWFAFFVGLCVMAAYALLGACWLVMRVDGELQRRAAGWARHSIRWTAAGMVAIAVTLGLANAGIFYKWSNTAHLGVAAMVWALMLLGFVAAEMLLARLPGKADGFSWLPFVLCVMLFVLMLCGLAYSFFPYLILDDMTIWDGSGALDSMRLVLAGTVIGVPVVLVFNILAYRSVFGKERRPVPLLPPPGA
>CP018039.1|AUL01791.1|3442012_3443353_-|cytochrome-ubiquinol-oxidase-subunit-I
MNIPPLLLARAQFTASLGFLALFLAISLALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMDKIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVLALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAEPELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLRLALGLGLLMLAASCATLALTCRRGFDPVALPRWWLRVLSLLMFAGALGVVATWCYDLAGMQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRKTGGSS
>CP018039.1|AUL01792.1|3443468_3445232_+|glutamine--tRNA-ligase
MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQGQPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVDAIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRGTLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPDGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNRIVTLRDSWQAA
>CP018039.1|AUL01793.1|3445343_3446222_+|septum-site-determining-protein-MinC
MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFFENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEGANLQGARDAGLVPVELSTSVARAPQVIDTAPPNDVATPVPSVPEATAEATAKAGPQDDEADGEQADEAPAHNPESVPTRAARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNVHVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLDGDTLRIEALKG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 64055

Natrialba_phage(12.5%)

transposase,tRNA,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK99005.1\|0_1920_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
AUK99006.1\|1916_2609_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
AUK99007.1\|2605_3403_+	chromosome partitioning protein	Q8JL10	Natrialba_phage	5.6e-20	34.9
AUK99008.1\|3409_4171_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUK99009.1\|4214_5132_+	chromosome partitioning protein ParB	I3NLC2	Bifidobacterium_phage	1.9e-16	38.1
AUK99010.1\|5124_5910_+	L-asparaginase	NA	NA	NA	NA
AUK99011.1\|5943_6126_+	hypothetical protein	NA	NA	NA	NA
AUK99012.1\|6721_7912_+	translation elongation factor Tu	A0A1V0SLW6	Klosneuvirus	3.1e-14	29.2
AUK99013.1\|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA
AUK99014.1\|8540_9074_+	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	1.4e-11	30.5
AUK99015.1\|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA
AUK99016.1\|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA
AUK99017.1\|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA
AUK99018.1\|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
AUK99019.1\|11661_15774_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	2.4e-21	28.8
AUK99020.1\|15773_20018_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	3.5e-68	24.7
AUL02357.1\|20126_20531_-	hypothetical protein	NA	NA	NA	NA
AUK99021.1\|20771_21947_+	hypothetical protein	NA	NA	NA	NA
AUK99022.1\|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA
AUL02358.1\|26575_27286_+	hypothetical protein	NA	NA	NA	NA
AUK99023.1\|27282_28185_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99024.1\|28314_28614_-	hypothetical protein	NA	NA	NA	NA
AUK99025.1\|28674_29109_-	hypothetical protein	NA	NA	NA	NA
AUK99026.1\|29141_30359_-	thiolase	NA	NA	NA	NA
AUK99027.1\|30364_30862_-	dehydratase	NA	NA	NA	NA
AUK99028.1\|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL02359.1\|32214_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUK99029.1\|33048_34470_+	2-methylcitrate dehydratase	NA	NA	NA	NA
AUK99030.1\|34673_35576_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99031.1\|35572_36763_-	MFS transporter	NA	NA	NA	NA
AUK99032.1\|37012_37924_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
AUK99033.1\|37925_40064_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
AUK99034.1\|40060_40600_+	D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AUK99035.1\|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AUK99036.1\|41318_42212_+	hypothetical protein	NA	NA	NA	NA
AUK99037.1\|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA
AUK99038.1\|42687_43218_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.7e-12	35.4
AUK99039.1\|43346_43526_-	hypothetical protein	NA	NA	NA	NA
AUK99040.1\|43663_44614_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL02360.1\|45224_45749_+	hypothetical protein	NA	NA	NA	NA
AUK99041.1\|45720_45957_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AUK99042.1\|46084_46978_+	hypothetical protein	NA	NA	NA	NA
AUK99043.1\|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA
AUK99044.1\|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
AUK99045.1\|50189_51092_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99046.1\|51134_52391_+	muropeptide transporter AmpG	NA	NA	NA	NA
AUK99047.1\|53622_54357_-	glutamate racemase	NA	NA	NA	NA
AUK99048.1\|54362_54953_-	arginine transporter ATP-binding subunit	G9BWD6	Planktothrix_phage	3.2e-20	33.6
AUK99049.1\|54977_55667_-	amino acid ABC transporter permease	NA	NA	NA	NA
AUK99050.1\|55663_56425_-	glutamate ABC transporter permease	NA	NA	NA	NA
AUK99051.1\|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK99052.1\|57497_58448_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99053.1\|59248_60475_-	serine kinase HipA	NA	NA	NA	NA
AUK99054.1\|60474_60894_-	transcriptional regulator	NA	NA	NA	NA
AUL02361.1\|61077_62019_-	hypothetical protein	NA	NA	NA	NA
AUK99055.1\|62442_63417_-	hypothetical protein	NA	NA	NA	NA
AUK99056.1\|63473_64055_-\|protease	protease	NA	NA	NA	NA

DBSCAN-SWA_2

69085 : 122072

Planktothrix_phage(20.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK99062.1\|69085_70036_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99063.1\|70129_70444_+\|transposase	transposase	NA	NA	NA	NA
AUK99064.1\|71636_73544_+	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.1e-117	37.2
AUK99065.1\|73705_74326_-	glutathione S-transferase	NA	NA	NA	NA
AUK99066.1\|74357_74939_-	N-acetylmuramoyl-L-alanine amidase	A0A1W6DX33	Sphingobium_phage	1.7e-05	54.3
AUK99067.1\|75027_75279_-	hypothetical protein	NA	NA	NA	NA
AUK99068.1\|75280_76123_-	hypothetical protein	NA	NA	NA	NA
AUK99069.1\|76228_77638_+	signal recognition particle protein	NA	NA	NA	NA
AUK99070.1\|77634_78348_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL02362.1\|78658_79603_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99071.1\|79599_81474_-	polysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	2.0e-23	26.9
AUK99072.1\|82821_83526_-	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA
AUK99073.1\|83522_84629_-	glycosyl transferase	NA	NA	NA	NA
AUK99074.1\|84890_85484_-	sugar transferase	NA	NA	NA	NA
AUK99075.1\|85480_86668_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA
AUK99076.1\|86730_87990_-	glycosyltransferase WbuB	NA	NA	NA	NA
AUK99077.1\|88013_89102_-	UDP-N-acetylglucosamine 2-epimerase	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.8e-46	36.3
AUK99078.1\|89109_90210_-	aminotransferase DegT	A0A2K9L0G1	Tupanvirus	3.3e-31	29.7
AUK99079.1\|90213_90789_-	N-acetyltransferase	NA	NA	NA	NA
AUK99080.1\|90792_91845_-	oxidoreductase	NA	NA	NA	NA
AUK99081.1\|91975_92983_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
AUK99082.1\|92984_94271_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
AUK99083.1\|94287_94443_-	hypothetical protein	NA	NA	NA	NA
AUK99084.1\|94467_95271_-	pantothenate kinase	NA	NA	NA	NA
AUK99085.1\|95267_96134_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
AUK99086.1\|96208_97339_+	ABC transporter permease	NA	NA	NA	NA
AUK99087.1\|97338_98178_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.1e-21	32.4
AUK99088.1\|98331_98799_-	hypothetical protein	NA	NA	NA	NA
AUK99089.1\|98888_99110_+	hypothetical protein	NA	NA	NA	NA
AUK99090.1\|99110_99713_+	hypothetical protein	NA	NA	NA	NA
AUK99091.1\|99742_100396_+	alpha/beta hydrolase	NA	NA	NA	NA
AUL02363.1\|100606_101785_+	peptidase	B6DZZ7	Stx2-converting_phage	5.8e-66	40.5
AUK99092.1\|101865_102732_+	D-amino acid aminotransferase	NA	NA	NA	NA
AUK99093.1\|102807_103083_+	DUF493 domain-containing protein	NA	NA	NA	NA
AUK99094.1\|103090_103753_+	octanoyltransferase	NA	NA	NA	NA
AUK99095.1\|103814_104816_+	lipoyl synthase	NA	NA	NA	NA
AUK99096.1\|104830_105379_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.7e-47	53.4
AUK99097.1\|105436_106333_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
AUK99098.1\|106329_107391_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.6e-78	44.8
AUK99099.1\|107426_108329_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99100.1\|109276_110470_+	cystathionine beta-lyase	NA	NA	NA	NA
AUK99101.1\|110551_111181_-	thiol:disulfide interchange protein	NA	NA	NA	NA
AUK99102.1\|111242_111926_-	cell division protein	NA	NA	NA	NA
AUK99103.1\|111935_113618_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
AUL02364.1\|113905_114253_+	hypothetical protein	NA	NA	NA	NA
AUK99104.1\|114343_114661_+	hypothetical protein	NA	NA	NA	NA
AUK99105.1\|114943_115960_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUK99106.1\|116035_116836_-	ABC transporter permease	NA	NA	NA	NA
AUK99107.1\|116832_117708_-	ABC transporter permease	NA	NA	NA	NA
AUK99108.1\|117718_119011_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK99109.1\|119053_120094_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-22	33.7
AUK99110.1\|120199_121021_-	phosphodiesterase	NA	NA	NA	NA
AUK99111.1\|121121_122072_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

164889 : 236264

Diachasmimorpha_longicaudata_entomopoxvirus(12.5%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK99146.1\|164889_165840_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99147.1\|167283_168186_-	hypothetical protein	NA	NA	NA	NA
AUK99148.1\|168163_168793_-	hypothetical protein	NA	NA	NA	NA
AUK99149.1\|169075_170506_+	RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.8e-44	29.8
AUK99150.1\|170539_171169_+	threonine transporter RhtB	NA	NA	NA	NA
AUK99151.1\|171217_172825_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	9.3e-14	37.8
AUK99152.1\|172861_173533_+	hypothetical protein	NA	NA	NA	NA
AUL02368.1\|173614_174091_-	bacterioferritin	NA	NA	NA	NA
AUK99153.1\|174345_175248_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99154.1\|176363_176891_+	hypothetical protein	NA	NA	NA	NA
AUK99155.1\|176982_177798_+	hypothetical protein	NA	NA	NA	NA
AUK99156.1\|177858_178593_+	sulfurtransferase	NA	NA	NA	NA
AUK99157.1\|178630_180709_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-27	23.6
AUK99158.1\|180958_181231_-	hypothetical protein	NA	NA	NA	NA
AUK99159.1\|181332_182418_+	ATP-binding protein	NA	NA	NA	NA
AUK99160.1\|182421_184326_+	hypothetical protein	NA	NA	NA	NA
AUK99161.1\|184322_187997_+	hypothetical protein	NA	NA	NA	NA
AUK99162.1\|188057_188621_+	dCTP deaminase	S5VM63	Pseudomonas_phage	2.6e-72	75.3
AUK99163.1\|188628_189051_-	glyoxalase	NA	NA	NA	NA
AUK99164.1\|189078_189498_-	glyoxalase	NA	NA	NA	NA
AUK99165.1\|189526_189874_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUL02369.1\|190147_190597_+	hypothetical protein	NA	NA	NA	NA
AUK99166.1\|190751_193022_+	lysine decarboxylase	NA	NA	NA	NA
AUK99167.1\|193097_194303_+	hypothetical protein	NA	NA	NA	NA
AUK99168.1\|195452_196088_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.8e-83	73.8
AUK99169.1\|196084_196978_+	ZIP family metal transporter	NA	NA	NA	NA
AUK99170.1\|197372_198473_+	glycine cleavage system protein T	NA	NA	NA	NA
AUK99171.1\|198554_198929_+	glycine cleavage system protein H	NA	NA	NA	NA
AUK99172.1\|198988_201853_+	glycine dehydrogenase (aminomethyl-transferring)	E3SN07	Prochlorococcus_phage	1.2e-261	51.4
AUK99173.1\|201997_202738_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUK99174.1\|202807_204019_+	formyl-CoA transferase	NA	NA	NA	NA
AUK99175.1\|204047_205016_+	hypothetical protein	NA	NA	NA	NA
AUK99176.1\|206735_207059_+	PsiF repeat family protein	NA	NA	NA	NA
AUL02370.1\|207163_208204_-	cyclase	NA	NA	NA	NA
AUK99177.1\|208209_208989_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
AUK99178.1\|209034_209331_-	hypothetical protein	NA	NA	NA	NA
AUK99179.1\|209356_209632_-	muconolactone delta-isomerase	NA	NA	NA	NA
AUK99180.1\|209688_210333_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AUK99181.1\|210332_211019_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AUL02371.1\|211217_212000_+	IclR family transcriptional regulator	NA	NA	NA	NA
AUK99182.1\|212050_212776_-	short-chain dehydrogenase	NA	NA	NA	NA
AUK99183.1\|212807_214157_-	short-chain fatty acid transporter	NA	NA	NA	NA
AUK99184.1\|214268_215201_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
AUK99185.1\|215658_218454_-	peptidase S8	NA	NA	NA	NA
AUK99186.1\|219047_221891_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AUK99187.1\|222061_222781_+	7-cyano-7-deazaguanine synthase QueC	A0A0A0RPC6	Escherichia_phage	8.0e-50	43.9
AUK99188.1\|222819_223368_-	GNAT family N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	1.2e-21	41.7
AUK99189.1\|223522_224422_+	virginiamycin B lyase	NA	NA	NA	NA
AUK99190.1\|224446_225397_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99191.1\|225615_226311_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUK99192.1\|226327_227740_+	hydroxyacid dehydrogenase	NA	NA	NA	NA
AUK99193.1\|227852_229283_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
AUK99194.1\|229324_231238_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
AUK99195.1\|231556_232123_+	preprotein translocase subunit SecD	NA	NA	NA	NA
AUK99196.1\|232213_233215_+	restriction endonuclease	NA	NA	NA	NA
AUK99197.1\|233329_234280_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99198.1\|234366_235317_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99199.1\|235313_236264_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

250678 : 303012

Bacillus_phage(25.0%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK99211.1\|250678_251620_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
AUK99212.1\|251616_253506_-	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	3.3e-79	32.8
AUL02373.1\|253610_254231_+	hypothetical protein	NA	NA	NA	NA
AUK99213.1\|254373_255759_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	4.5e-17	30.3
AUK99214.1\|255689_256226_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
AUK99215.1\|256377_257769_+	fumarate hydratase, class II	NA	NA	NA	NA
AUK99216.1\|257785_258766_-	hypothetical protein	NA	NA	NA	NA
AUK99217.1\|258901_259885_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK99218.1\|259949_260849_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK99219.1\|260955_262710_+	gamma-glutamyltransferase	NA	NA	NA	NA
AUK99220.1\|262717_263842_-	carnitine dehydratase	NA	NA	NA	NA
AUK99221.1\|263855_264836_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK99222.1\|265566_266517_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99223.1\|266531_266903_+	hypothetical protein	NA	NA	NA	NA
AUK99224.1\|267076_267622_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AUK99225.1\|267747_269325_+	cytochrome d terminal oxidase subunit 1	NA	NA	NA	NA
AUK99226.1\|269340_270495_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AUK99227.1\|270508_270634_+	cyd operon protein YbgT	NA	NA	NA	NA
AUK99228.1\|270630_272382_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.4e-09	23.8
AUK99229.1\|272378_274058_+	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	3.6e-16	27.6
AUK99230.1\|274120_274669_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.3e-28	43.1
AUK99231.1\|275811_276090_+	hypothetical protein	NA	NA	NA	NA
AUK99232.1\|277133_278084_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99233.1\|278360_278522_+	DUF4224 domain-containing protein	NA	NA	NA	NA
AUK99234.1\|278529_278670_+	hypothetical protein	NA	NA	NA	NA
AUK99235.1\|279188_279638_-\|protease	ClpXP protease specificity-enhancing factor	NA	NA	NA	NA
AUK99236.1\|279647_280259_-	glutathione S-transferase	NA	NA	NA	NA
AUK99237.1\|280417_281266_-	cytochrome c1	NA	NA	NA	NA
AUK99238.1\|281291_282674_-	cytochrome b	NA	NA	NA	NA
AUK99239.1\|282738_283380_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
AUK99240.1\|283519_283978_+	large-conductance mechanosensitive channel protein	NA	NA	NA	NA
AUK99241.1\|284002_284779_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
AUL02374.1\|284832_285969_+	2-alkenal reductase	W5SAB9	Pithovirus	1.2e-07	31.2
AUK99242.1\|285965_286916_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99243.1\|287013_287640_-	hypothetical protein	NA	NA	NA	NA
AUK99244.1\|287662_288589_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA
AUK99245.1\|288597_290184_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK99246.1\|290180_291185_-	acetylesterase	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	7.5e-30	31.5
AUK99247.1\|291384_292245_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUK99248.1\|292276_293278_-	hypothetical protein	NA	NA	NA	NA
AUK99249.1\|293348_294158_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUK99250.1\|294235_296095_+	dihydroxy-acid dehydratase	NA	NA	NA	NA
AUK99251.1\|296223_297426_-	MFS transporter	NA	NA	NA	NA
AUK99252.1\|297539_298421_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK99253.1\|299923_300484_-	5'-3'-deoxyribonucleotidase	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	3.2e-14	30.8
AUK99254.1\|300543_301494_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99255.1\|301685_301946_-	hypothetical protein	NA	NA	NA	NA
AUK99256.1\|302109_303012_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

390847 : 448356

Orpheovirus(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK99341.1\|390847_391798_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99342.1\|391940_392852_+	reductase	NA	NA	NA	NA
AUK99343.1\|392848_393097_+	NrdH-redoxin	NA	NA	NA	NA
AUK99344.1\|393093_394299_+	CoA transferase	NA	NA	NA	NA
AUK99345.1\|394371_395367_-	hypothetical protein	NA	NA	NA	NA
AUK99346.1\|395389_396610_-	acyl-CoA transferase	NA	NA	NA	NA
AUK99347.1\|396606_397251_-	hypothetical protein	NA	NA	NA	NA
AUK99348.1\|397247_397640_-	hypothetical protein	NA	NA	NA	NA
AUK99349.1\|397528_398881_-	hypothetical protein	NA	NA	NA	NA
AUK99350.1\|398981_399791_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUL02380.1\|400095_401049_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	5.6e-59	42.5
AUK99351.1\|401147_402131_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99352.1\|402807_403578_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUK99353.1\|403574_404753_-	carnitine dehydratase	NA	NA	NA	NA
AUK99354.1\|404920_406627_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
AUK99355.1\|406623_407520_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK99356.1\|407560_409150_-	sulfurtransferase	NA	NA	NA	NA
AUK99357.1\|409199_410192_-	hypothetical protein	NA	NA	NA	NA
AUK99358.1\|410260_410860_-	hypothetical protein	NA	NA	NA	NA
AUK99359.1\|411320_412301_-	hypothetical protein	NA	NA	NA	NA
AUK99360.1\|412376_413279_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99361.1\|413415_414330_+	EamA family transporter	NA	NA	NA	NA
AUK99362.1\|414326_414986_+	hypothetical protein	NA	NA	NA	NA
AUK99363.1\|415075_415999_+	alpha/beta hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	4.8e-07	27.2
AUK99364.1\|416004_416460_-	hypothetical protein	NA	NA	NA	NA
AUK99365.1\|416456_417560_-	hypothetical protein	NA	NA	NA	NA
AUK99366.1\|417747_419367_-	dolichyl-phosphate-mannose--protein mannosyltransferase	NA	NA	NA	NA
AUK99367.1\|419363_420422_-	glycosyltransferase	I1TED8	Salmonella_phage	2.8e-59	40.5
AUK99368.1\|420551_421046_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUK99369.1\|421138_422116_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99370.1\|422311_423517_+	sodium/glutamate symporter	NA	NA	NA	NA
AUK99371.1\|423513_425025_+	TRAP ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL02381.1\|425040_426354_-	short-chain fatty acid transporter	NA	NA	NA	NA
AUK99372.1\|426544_426724_-	hypothetical protein	NA	NA	NA	NA
AUK99373.1\|427133_427868_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	1.4e-41	43.8
AUK99374.1\|430360_431263_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99375.1\|431394_431793_-	elongation factor G	E4ZFJ7	Streptococcus_phage	9.0e-19	44.3
AUK99376.1\|432203_432674_-	universal stress protein	NA	NA	NA	NA
AUK99377.1\|432762_433107_-	TIGR01244 family protein	NA	NA	NA	NA
AUK99378.1\|433206_434607_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUK99379.1\|436395_436914_-	methyltransferase	G3MA03	Bacillus_virus	2.1e-12	38.9
AUK99380.1\|437024_437780_+	hypothetical protein	A0A0R6PEZ3	Moraxella_phage	2.9e-42	40.8
AUK99381.1\|437975_439208_+	CoA transferase	NA	NA	NA	NA
AUK99382.1\|439200_439986_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUK99383.1\|440052_441024_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK99384.1\|441034_442012_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK99385.1\|442137_443310_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUK99386.1\|443336_444365_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUK99387.1\|444430_445624_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AUK99388.1\|447405_448356_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

636780 : 736892

107

uncultured_Caudovirales_phage(13.79%)

transposase,tRNA,terminase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK99552.1\|636780_637731_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99553.1\|637829_638630_-	hypothetical protein	NA	NA	NA	NA
AUK99554.1\|638691_639075_+	thiol reductase thioredoxin	NA	NA	NA	NA
AUK99555.1\|639086_640520_-	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.5e-52	34.4
AUK99556.1\|640726_641056_-	hypothetical protein	NA	NA	NA	NA
AUK99557.1\|641058_641808_-	hypothetical protein	NA	NA	NA	NA
AUK99558.1\|641990_642911_+	branched chain amino acid aminotransferase	NA	NA	NA	NA
AUK99559.1\|642957_643170_+	hypothetical protein	NA	NA	NA	NA
AUK99560.1\|643192_643615_+	DUF4440 domain-containing protein	NA	NA	NA	NA
AUK99561.1\|643631_644732_+	alpha/beta hydrolase	NA	NA	NA	NA
AUK99562.1\|644828_646346_-	peptidase	NA	NA	NA	NA
AUK99563.1\|646421_647261_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.1e-66	48.9
AUL02390.1\|647282_648155_-	hypothetical protein	NA	NA	NA	NA
AUK99564.1\|648245_649340_-	porin	NA	NA	NA	NA
AUK99565.1\|649633_650536_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL02391.1\|650658_651600_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99566.1\|651683_652043_-	hypothetical protein	NA	NA	NA	NA
AUK99567.1\|652424_653462_-	hypothetical protein	NA	NA	NA	NA
AUK99568.1\|653778_655119_+	Xaa-Pro aminopeptidase	NA	NA	NA	NA
AUK99569.1\|655128_655581_-	hypothetical protein	NA	NA	NA	NA
AUK99570.1\|655686_656859_+	monooxygenase	NA	NA	NA	NA
AUK99571.1\|656924_657950_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AUK99572.1\|657990_658230_+	Fis family transcriptional regulator	NA	NA	NA	NA
AUK99573.1\|658299_659889_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	8.7e-65	47.2
AUK99574.1\|659888_660437_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
AUK99575.1\|660517_661090_+	Holliday junction DNA helicase RuvA	NA	NA	NA	NA
AUK99576.1\|661108_662020_-	NAD-dependent dehydratase	NA	NA	NA	NA
AUK99577.1\|662093_663062_-	serine dehydratase	NA	NA	NA	NA
AUK99578.1\|663184_664258_+	Holliday junction DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.3e-08	25.7
AUK99579.1\|664262_666083_-	ATP-dependent DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	3.1e-74	35.3
AUK99580.1\|667197_667533_+	hypothetical protein	NA	NA	NA	NA
AUK99581.1\|667666_668317_+	carbonate dehydratase	NA	NA	NA	NA
AUK99582.1\|668338_669757_-	amidase	NA	NA	NA	NA
AUK99583.1\|669826_670582_-	hypothetical protein	NA	NA	NA	NA
AUL02392.1\|670550_671309_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUK99584.1\|671319_672201_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUK99585.1\|672217_672925_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.2e-07	25.4
AUK99586.1\|672927_673686_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-14	24.4
AUK99587.1\|673895_675638_+	sulfite reductase	NA	NA	NA	NA
AUK99588.1\|675630_676155_+	hypothetical protein	NA	NA	NA	NA
AUK99589.1\|676194_676989_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK99590.1\|677156_678230_+	hypothetical protein	NA	NA	NA	NA
AUK99591.1\|678328_679279_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99592.1\|679530_679737_-	hypothetical protein	NA	NA	NA	NA
AUL02393.1\|679808_680420_-	LexA family transcriptional repressor	NA	NA	NA	NA
AUK99593.1\|680899_681220_-	hypothetical protein	NA	NA	NA	NA
AUK99594.1\|681212_681911_-	hypothetical protein	NA	NA	NA	NA
AUK99595.1\|681925_682147_-	hypothetical protein	NA	NA	NA	NA
AUK99596.1\|682164_683115_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99597.1\|683754_684240_+\|terminase	terminase	C7U0W1	Enterobacteria_phage	7.3e-39	61.5
AUK99598.1\|684226_685504_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.4e-150	64.7
AUK99599.1\|685506_686925_+	hypothetical protein	R9TF43	Synechococcus_phage	2.2e-99	42.1
AUK99600.1\|686896_688009_+	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	2.1e-102	49.7
AUK99601.1\|688014_688257_+	hypothetical protein	A0A0H5AUE5	Pseudomonas_phage	5.6e-16	53.2
AUK99602.1\|688379_688982_+	hypothetical protein	R9TF81	Synechococcus_phage	7.9e-27	43.6
AUK99603.1\|689410_690361_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99604.1\|691035_691287_+	hypothetical protein	NA	NA	NA	NA
AUK99605.1\|691349_691832_+	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	1.8e-13	37.1
AUK99606.1\|691833_692034_+	hypothetical protein	NA	NA	NA	NA
AUK99607.1\|692033_692429_+	hypothetical protein	A0A2D2W284	Stenotrophomonas_phage	7.8e-07	35.0
AUK99608.1\|692425_692824_+	hypothetical protein	I6PCW1	Cronobacter_phage	4.2e-16	38.0
AUK99609.1\|692820_693243_+	hypothetical protein	NA	NA	NA	NA
AUK99610.1\|693250_693751_+	HNH endonuclease	A0A1I9SEX5	Klebsiella_phage	4.4e-31	45.1
AUK99611.1\|694005_694524_+\|tail	phage tail protein	A0A1S5R1H0	Pseudomonas_phage	5.4e-24	38.3
AUK99612.1\|694533_694863_+	hypothetical protein	A0A2H4J121	uncultured_Caudovirales_phage	2.9e-15	44.0
AUK99613.1\|694880_695171_+	hypothetical protein	A0A2H4JBP7	uncultured_Caudovirales_phage	3.7e-14	45.2
AUK99614.1\|695196_697809_+\|tail	phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-105	38.6
AUK99615.1\|697818_698178_+	hypothetical protein	NA	NA	NA	NA
AUK99616.1\|698245_698779_+	hypothetical protein	A5A3Q9	Burkholderia_phage	1.1e-40	46.9
AUK99617.1\|698775_699165_+	hypothetical protein	A0A0G3EYJ9	Achromobacter_phage	3.0e-35	50.0
AUK99618.1\|699157_703114_+	hypothetical protein	A0A0B5A1N2	Achromobacter_phage	3.9e-215	40.8
AUK99619.1\|703118_703535_+	hypothetical protein	NA	NA	NA	NA
AUK99620.1\|703753_704017_+	hypothetical protein	A0A1B0V3F2	Roseobacter_phage	7.2e-09	41.8
AUK99621.1\|704016_704829_+	hypothetical protein	NA	NA	NA	NA
AUK99622.1\|704833_705076_+	hypothetical protein	NA	NA	NA	NA
AUK99623.1\|705054_705606_+	lysozyme	NA	NA	NA	NA
AUK99624.1\|705605_706121_+	hypothetical protein	NA	NA	NA	NA
AUK99625.1\|706117_706399_-	hypothetical protein	NA	NA	NA	NA
AUK99626.1\|706398_706620_-	hypothetical protein	NA	NA	NA	NA
AUK99627.1\|706948_707620_-	hypothetical protein	Q5QF62	Pseudomonas_virus	4.7e-36	39.9
AUK99628.1\|707547_707916_-	hypothetical protein	NA	NA	NA	NA
AUK99629.1\|707975_708662_-	DNA-binding response regulator	NA	NA	NA	NA
AUK99630.1\|708642_709215_-	RNA pyrophosphohydrolase	NA	NA	NA	NA
AUK99631.1\|709280_711011_+\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	4.6e-11	29.4
AUK99632.1\|711063_711492_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
AUK99633.1\|711494_712175_+	protein TolQ	NA	NA	NA	NA
AUK99634.1\|712174_712633_+	protein TolR	NA	NA	NA	NA
AUK99635.1\|712669_713644_+	protein TolA	NA	NA	NA	NA
AUK99636.1\|713660_714977_+	Tol-Pal system beta propeller repeat protein TolB	NA	NA	NA	NA
AUK99637.1\|715008_715506_+	peptidoglycan-associated lipoprotein	NA	NA	NA	NA
AUK99638.1\|715592_716282_+	tol-pal system protein YbgF	NA	NA	NA	NA
AUK99639.1\|716281_717331_+	iron-siderophore ABC transporter permease	NA	NA	NA	NA
AUK99640.1\|717327_718122_+	iron ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-15	30.6
AUK99641.1\|718290_718641_+	hypothetical protein	NA	NA	NA	NA
AUK99642.1\|718616_719174_+	hypothetical protein	NA	NA	NA	NA
AUK99643.1\|720303_721254_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99644.1\|723391_724621_+	hypothetical protein	NA	NA	NA	NA
AUK99645.1\|724623_726066_-	pyruvate kinase	NA	NA	NA	NA
AUK99646.1\|726170_727316_+	glycerate kinase	W6LM47	Streptococcus_phage	1.7e-41	42.2
AUK99647.1\|727347_728145_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase	NA	NA	NA	NA
AUK99648.1\|728169_729729_-	molecular chaperone SurA	NA	NA	NA	NA
AUK99649.1\|729725_732092_-	LPS biosynthesis protein	NA	NA	NA	NA
AUL02394.1\|732270_733311_+	aminoglycoside phosphotransferase	NA	NA	NA	NA
AUK99650.1\|733310_734003_+	mannose-1-phosphate guanylyltransferase	NA	NA	NA	NA
AUK99651.1\|734146_734848_+	hypothetical protein	NA	NA	NA	NA
AUK99652.1\|734832_735210_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
AUK99653.1\|735941_736892_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

859780 : 913911

Vibrio_phage(25.0%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK99747.1\|859780_861739_-\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	8.0e-28	30.3
AUK99748.1\|861821_862772_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99749.1\|862992_863661_+	transcriptional regulator	NA	NA	NA	NA
AUK99750.1\|863784_864891_+	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AUK99751.1\|864903_868017_+	multidrug efflux protein	S5VTK5	Leptospira_phage	4.5e-57	21.5
AUK99752.1\|868013_869507_+	RND transporter	NA	NA	NA	NA
AUK99753.1\|869521_870193_+	MarR family transcriptional regulator	NA	NA	NA	NA
AUL02403.1\|870236_870689_-	azurin	NA	NA	NA	NA
AUK99754.1\|870871_871519_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUL02404.1\|871622_873671_+	hydantoinase	NA	NA	NA	NA
AUK99755.1\|873667_875680_+	hydantoin utilization protein B	NA	NA	NA	NA
AUK99756.1\|875705_877040_+	hypothetical protein	NA	NA	NA	NA
AUK99757.1\|877148_878141_+	hypothetical protein	NA	NA	NA	NA
AUK99758.1\|878207_880292_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
AUK99759.1\|880316_881288_-	hypothetical protein	NA	NA	NA	NA
AUK99760.1\|881416_882418_-	peptidase M14	NA	NA	NA	NA
AUK99761.1\|882451_883603_-	cystathionine beta-lyase	NA	NA	NA	NA
AUK99762.1\|883806_884697_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK99763.1\|884774_885599_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUK99764.1\|885795_886812_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUK99765.1\|887008_887992_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK99766.1\|888050_889178_-	argininosuccinate lyase	NA	NA	NA	NA
AUK99767.1\|889168_889543_-	hypothetical protein	NA	NA	NA	NA
AUK99768.1\|889590_890979_-	hypothetical protein	NA	NA	NA	NA
AUK99769.1\|891009_891999_-	hypothetical protein	NA	NA	NA	NA
AUK99770.1\|892109_893342_-	methylaspartate ammonia-lyase	NA	NA	NA	NA
AUK99771.1\|893623_894424_+	IclR family transcriptional regulator	NA	NA	NA	NA
AUK99772.1\|894446_896678_-\|holin	high-affinity choline transporter BetT	NA	NA	NA	NA
AUK99773.1\|897465_897912_-	preprotein translocase subunit SecG	NA	NA	NA	NA
AUK99774.1\|897933_898680_-	triose-phosphate isomerase	NA	NA	NA	NA
AUK99775.1\|898823_899801_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
AUK99776.1\|900434_901046_+	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	3.3e-12	32.5
AUK99777.1\|901039_902257_-	threonine ammonia-lyase	NA	NA	NA	NA
AUK99778.1\|902397_903348_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99779.1\|903344_904064_-	hypothetical protein	NA	NA	NA	NA
AUK99780.1\|904184_906344_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
AUK99781.1\|906434_906704_-	30S ribosomal protein S15	NA	NA	NA	NA
AUL02405.1\|906997_907525_+	hypothetical protein	NA	NA	NA	NA
AUK99782.1\|907543_908323_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AUK99783.1\|908490_909507_-	ketol-acid reductoisomerase	NA	NA	NA	NA
AUK99784.1\|909579_910071_-	acetolactate synthase small subunit	NA	NA	NA	NA
AUK99785.1\|910081_911797_-	acetolactate synthase, large subunit, biosynthetic type	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	3.1e-60	30.3
AUK99786.1\|912267_912879_+	hypothetical protein	NA	NA	NA	NA
AUK99787.1\|912960_913911_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

938410 : 1000559

Bacillus_virus(15.38%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK99808.1\|938410_939313_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99809.1\|939309_939693_-	Rieske (2Fe-2S) protein	NA	NA	NA	NA
AUK99810.1\|939747_941562_-	metal ABC transporter permease	W8CYL7	Bacillus_phage	5.7e-44	27.9
AUL02407.1\|941711_942539_+	oxidoreductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-67	47.4
AUK99811.1\|942584_943565_+	alcohol dehydrogenase	NA	NA	NA	NA
AUK99812.1\|943561_943774_-	hypothetical protein	NA	NA	NA	NA
AUK99813.1\|943770_944952_-	hypothetical protein	NA	NA	NA	NA
AUK99814.1\|945115_945850_+	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.9e-62	49.2
AUK99815.1\|945851_948464_-	penicillin-binding protein	NA	NA	NA	NA
AUK99816.1\|948599_950513_-	S9 family peptidase	NA	NA	NA	NA
AUK99817.1\|951128_951539_-	phenylacetic acid degradation protein	NA	NA	NA	NA
AUK99818.1\|951636_952722_+	DNA polymerase IV	NA	NA	NA	NA
AUK99819.1\|952820_953771_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99820.1\|953767_954742_-	hypothetical protein	NA	NA	NA	NA
AUK99821.1\|954887_955778_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	4.3e-05	27.6
AUL02408.1\|956054_956447_-	hypothetical protein	A0A0R6PJ17	Moraxella_phage	4.8e-25	45.0
AUK99822.1\|956576_957527_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99823.1\|957556_957739_-	addiction module toxin, HicA family	A0A1L2JY37	Aeribacillus_phage	3.7e-12	56.1
AUK99824.1\|958511_959693_-	MFS transporter	NA	NA	NA	NA
AUK99825.1\|959908_960586_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AUK99826.1\|960582_961308_-	bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase	NA	NA	NA	NA
AUK99827.1\|961433_962015_-	hypothetical protein	NA	NA	NA	NA
AUK99828.1\|962385_965067_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.2e-104	33.5
AUL02409.1\|965069_966200_+	phosphoserine transaminase	M1Q1P2	Streptococcus_phage	4.9e-78	44.0
AUK99829.1\|966192_967278_+	chorismate mutase	NA	NA	NA	NA
AUK99830.1\|967364_968264_+	prephenate dehydrogenase	NA	NA	NA	NA
AUK99831.1\|968260_969589_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AUK99832.1\|969603_970275_+	cytidylate kinase	NA	NA	NA	NA
AUK99833.1\|970462_972178_+	30S ribosomal protein S1	NA	NA	NA	NA
AUK99834.1\|972179_972539_+	integration host factor subunit beta	NA	NA	NA	NA
AUK99835.1\|972730_973045_+	hypothetical protein	NA	NA	NA	NA
AUK99836.1\|973087_974308_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
AUK99837.1\|974304_975246_+	hypothetical protein	A0A2H4N7X4	Lake_Baikal_phage	1.5e-16	28.1
AUK99838.1\|975242_976232_+	ADP-glyceromanno-heptose 6-epimerase	E3SJ87	Synechococcus_phage	2.2e-26	34.4
AUL02410.1\|976521_976851_+	hypothetical protein	NA	NA	NA	NA
AUK99839.1\|976949_977900_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99840.1\|977980_978892_+	cysteine synthase B	A0A1X9I5K7	Streptococcus_phage	8.0e-47	38.8
AUK99841.1\|978952_980098_-	lytic murein transglycosylase B	NA	NA	NA	NA
AUK99842.1\|980117_981032_+	deacetylase	A0A2K9KZC4	Tupanvirus	9.8e-45	34.7
AUK99843.1\|981103_981853_+	electron transporter RnfB	NA	NA	NA	NA
AUK99844.1\|981852_982782_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA
AUK99845.1\|983025_984852_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUK99846.1\|984934_985576_+	peroxidase	NA	NA	NA	NA
AUK99847.1\|985765_986800_+	sulfate transporter subunit	NA	NA	NA	NA
AUK99848.1\|986815_987019_+	hypothetical protein	NA	NA	NA	NA
AUK99849.1\|987040_987715_+	sulfate ABC transporter permease subunit CysT	NA	NA	NA	NA
AUK99850.1\|987829_988612_+	sulfate ABC transporter permease subunit CysW	NA	NA	NA	NA
AUK99851.1\|988636_989701_+	sulfate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.8e-24	30.3
AUL02411.1\|990498_991407_+	sulfate adenylyltransferase small subunit	NA	NA	NA	NA
AUK99852.1\|992894_994169_+	radical SAM protein	NA	NA	NA	NA
AUK99853.1\|994322_994703_+	hypothetical protein	NA	NA	NA	NA
AUK99854.1\|994710_995583_-	multidrug DMT transporter permease	NA	NA	NA	NA
AUK99855.1\|995888_996269_+	50S ribosomal protein L19	NA	NA	NA	NA
AUK99856.1\|996518_997205_+	coenzyme A pyrophosphatase	NA	NA	NA	NA
AUK99857.1\|997300_998251_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99858.1\|998355_999405_+	aldo/keto reductase	NA	NA	NA	NA
AUK99859.1\|999542_1000559_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1046265 : 1117627

uncultured_Mediterranean_phage(30.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK99891.1\|1046265_1047216_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99892.1\|1047514_1048252_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA
AUK99893.1\|1048687_1049011_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA
AUK99894.1\|1049045_1049606_+	transcriptional regulator FlhC	NA	NA	NA	NA
AUK99895.1\|1049726_1050602_+	flagellar motor stator protein MotA	NA	NA	NA	NA
AUK99896.1\|1050614_1051562_+	flagellar motor protein MotB	NA	NA	NA	NA
AUK99897.1\|1051663_1051957_+	two-component system response regulator	NA	NA	NA	NA
AUK99898.1\|1051983_1054041_+	chemotaxis protein CheA	NA	NA	NA	NA
AUK99899.1\|1054055_1054556_+	chemotaxis protein CheW	NA	NA	NA	NA
AUK99900.1\|1054629_1056336_+	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-12	41.7
AUK99901.1\|1057199_1058252_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
AUK99902.1\|1058304_1058694_+	two-component system response regulator	Q56AR1	Bacillus_thuringiensis_phage	5.7e-10	33.3
AUK99903.1\|1058702_1059335_+	protein phosphatase CheZ	NA	NA	NA	NA
AUK99904.1\|1059434_1060451_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL02416.1\|1061281_1062289_+	aldo/keto reductase	NA	NA	NA	NA
AUK99905.1\|1062285_1063929_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA
AUK99906.1\|1063925_1064813_-	magnesium/cobalt efflux protein	NA	NA	NA	NA
AUK99907.1\|1064953_1065427_-	rRNA maturation RNase YbeY	NA	NA	NA	NA
AUK99908.1\|1065416_1066439_-	phosphate starvation-inducible protein PhoH	A0A0S0MVD6	Pseudomonas_phage	8.7e-50	45.4
AUK99909.1\|1066435_1067863_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
AUK99910.1\|1068800_1069817_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUK99911.1\|1070149_1071085_-	protein-export membrane protein SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.0e-41	35.5
AUK99912.1\|1071134_1073015_-	protein-export membrane protein SecD	NA	NA	NA	NA
AUK99913.1\|1073081_1073426_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.0e-10	40.4
AUK99914.1\|1073570_1074707_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.9e-85	44.4
AUK99915.1\|1074703_1075777_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
AUK99916.1\|1075934_1077371_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
AUL02417.1\|1077461_1078103_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
AUL02418.1\|1081496_1082447_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL02419.1\|1083649_1085071_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
AUL02420.1\|1085337_1086051_+	hypothetical protein	NA	NA	NA	NA
AUK99917.1\|1086135_1086453_+	hypothetical protein	NA	NA	NA	NA
AUK99918.1\|1086493_1086907_+	hypothetical protein	NA	NA	NA	NA
AUK99919.1\|1086908_1087268_+	hypothetical protein	NA	NA	NA	NA
AUK99920.1\|1087310_1088855_-	3-octaprenyl-4-hydroxybenzoate decarboxylase	NA	NA	NA	NA
AUK99921.1\|1088938_1089769_+	lytic transglycosylase	NA	NA	NA	NA
AUK99922.1\|1089803_1090958_-	aminotransferase	NA	NA	NA	NA
AUK99923.1\|1091000_1091873_+	hypothetical protein	NA	NA	NA	NA
AUK99924.1\|1091989_1094278_+	NADP-dependent malic enzyme	NA	NA	NA	NA
AUK99925.1\|1095484_1095949_+	barstar family protein 2	NA	NA	NA	NA
AUK99926.1\|1095975_1096926_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL02421.1\|1097293_1098070_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-17	28.7
AUK99927.1\|1098114_1098951_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA
AUK99928.1\|1098993_1100010_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
AUK99929.1\|1100144_1101185_-	phosphate ABC transporter substrate-binding protein PstS	M4QHS4	Cyanophage	2.1e-51	40.2
AUK99930.1\|1101379_1103461_-	RNA degradosome polyphosphate kinase	NA	NA	NA	NA
AUK99931.1\|1103696_1105190_+	exopolyphosphatase	NA	NA	NA	NA
AUK99932.1\|1105420_1106215_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUK99933.1\|1106435_1107794_-	phosphoglucosamine mutase	NA	NA	NA	NA
AUK99934.1\|1107790_1108633_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-26	32.5
AUK99935.1\|1108651_1110538_-	cell division protein FtsH	M4QMW8	Micromonas_pusilla_virus	1.4e-109	41.5
AUK99936.1\|1110775_1111408_-	rRNA methyltransferase	NA	NA	NA	NA
AUK99937.1\|1111426_1112029_+	hypothetical protein	NA	NA	NA	NA
AUK99938.1\|1112474_1112894_-	hypothetical protein	NA	NA	NA	NA
AUK99939.1\|1113933_1114734_-	hypothetical protein	NA	NA	NA	NA
AUK99940.1\|1114777_1115764_-	homoserine kinase	NA	NA	NA	NA
AUK99941.1\|1115939_1116917_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AUK99942.1\|1116913_1117627_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

1157562 : 1236182

Erysipelothrix_phage(20.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK99970.1\|1157562_1158465_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99971.1\|1158611_1159235_-	fimbrial protein	NA	NA	NA	NA
AUK99972.1\|1159408_1161691_-	NADP-dependent malic enzyme	NA	NA	NA	NA
AUK99973.1\|1161845_1164542_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
AUK99974.1\|1164667_1165156_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AUK99975.1\|1165191_1167054_+	oligopeptide transporter, OPT family	NA	NA	NA	NA
AUK99976.1\|1167032_1167242_+	hypothetical protein	NA	NA	NA	NA
AUK99977.1\|1167566_1170437_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
AUK99978.1\|1170482_1171697_+	dihydrolipoamide succinyltransferase	NA	NA	NA	NA
AUK99979.1\|1171926_1173354_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-41	28.1
AUK99980.1\|1173451_1174543_+	cell division protein ZapE	NA	NA	NA	NA
AUK99981.1\|1174555_1175314_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUK99982.1\|1175401_1176304_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK99983.1\|1176300_1177251_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK99984.1\|1177380_1178364_-	LacI family transcriptional regulator	NA	NA	NA	NA
AUK99985.1\|1178418_1179141_-	short-chain dehydrogenase	NA	NA	NA	NA
AUK99986.1\|1179655_1180354_+	hypothetical protein	NA	NA	NA	NA
AUK99987.1\|1180617_1181973_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AUK99988.1\|1182053_1184429_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
AUK99989.1\|1184593_1186669_+	helicase	A0A127AW80	Bacillus_phage	2.4e-75	30.0
AUL02424.1\|1186730_1187525_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AUK99990.1\|1187632_1188595_+	RNA pseudouridine synthase	NA	NA	NA	NA
AUK99991.1\|1188582_1189338_+	hypothetical protein	NA	NA	NA	NA
AUK99992.1\|1189445_1191083_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA
AUK99993.1\|1191150_1191888_+	beta-ketoacyl-ACP reductase	NA	NA	NA	NA
AUK99994.1\|1191990_1192566_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA
AUK99995.1\|1192738_1193275_+	hypothetical protein	NA	NA	NA	NA
AUL02425.1\|1193307_1193622_+	periplasmic lipoprotein involved in iron transport	NA	NA	NA	NA
AUK99996.1\|1193637_1194483_+	FTR1 family iron permease	NA	NA	NA	NA
AUK99997.1\|1194521_1195901_+	hypothetical protein	NA	NA	NA	NA
AUK99998.1\|1195978_1196860_+	phenazine biosynthesis protein PhzC/PhzF	NA	NA	NA	NA
AUK99999.1\|1197005_1197908_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00001.1\|1197904_1198315_-	lactoylglutathione lyase	NA	NA	NA	NA
AUL00002.1\|1198422_1199277_-	2-pyrone-4,6-dicarboxylate hydrolase	NA	NA	NA	NA
AUL00003.1\|1199269_1200232_-	hypothetical protein	NA	NA	NA	NA
AUL00004.1\|1200277_1201402_-	racemase	Q6A202	Oenococcus_phage	1.5e-31	28.3
AUL00005.1\|1201507_1202386_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL00006.1\|1202510_1203290_+	short-chain dehydrogenase	NA	NA	NA	NA
AUL00007.1\|1203443_1204865_+	MFS transporter	NA	NA	NA	NA
AUL00008.1\|1205299_1206997_+	sodium:proline symporter	NA	NA	NA	NA
AUL00009.1\|1207025_1207148_+	hypothetical protein	NA	NA	NA	NA
AUL02426.1\|1207223_1208165_-	LD-carboxypeptidase	NA	NA	NA	NA
AUL00010.1\|1208491_1209238_+	hypothetical protein	NA	NA	NA	NA
AUL00011.1\|1209245_1210172_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL00012.1\|1210293_1211211_+	oxidoreductase	NA	NA	NA	NA
AUL00013.1\|1211250_1212204_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL00014.1\|1212228_1212807_+	hypothetical protein	NA	NA	NA	NA
AUL00015.1\|1214480_1215089_+	hypothetical protein	NA	NA	NA	NA
AUL00016.1\|1215166_1215520_-	hypothetical protein	NA	NA	NA	NA
AUL02427.1\|1215603_1216536_-	succinylglutamate desuccinylase	NA	NA	NA	NA
AUL00017.1\|1216843_1217746_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00018.1\|1217832_1218783_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00019.1\|1219989_1221018_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUL00020.1\|1221097_1222396_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUL00021.1\|1222392_1222929_-	TRAP transporter small permease protein	NA	NA	NA	NA
AUL00022.1\|1223286_1227333_+	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	6.3e-160	67.4
AUL00023.1\|1227573_1235235_+	adhesin	A0A0R6PJK4	Moraxella_phage	7.3e-24	30.9
AUL00024.1\|1235231_1236182_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_11

1270705 : 1328911

Klosneuvirus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL00053.1\|1270705_1271608_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00054.1\|1271793_1272063_-	hypothetical protein	NA	NA	NA	NA
AUL00055.1\|1272301_1272940_+	transcriptional regulator	NA	NA	NA	NA
AUL00056.1\|1273189_1273726_+	hypothetical protein	NA	NA	NA	NA
AUL00057.1\|1273744_1275358_+	autotransporter	NA	NA	NA	NA
AUL00058.1\|1275354_1275966_-	hypothetical protein	NA	NA	NA	NA
AUL00059.1\|1276188_1277649_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.6e-97	41.3
AUL00060.1\|1277745_1279338_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.0e-17	33.3
AUL00061.1\|1279691_1279949_+	transcriptional regulator	NA	NA	NA	NA
AUL00062.1\|1279950_1281291_+	toxin HipA	NA	NA	NA	NA
AUL00063.1\|1281386_1282076_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUL00064.1\|1282088_1283519_+	MFS transporter	NA	NA	NA	NA
AUL00065.1\|1285243_1286065_+	transcriptional regulator	NA	NA	NA	NA
AUL00066.1\|1286075_1287647_+	hypothetical protein	NA	NA	NA	NA
AUL00067.1\|1287675_1288653_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL00068.1\|1288679_1289483_+	nitrate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-30	38.2
AUL00069.1\|1289479_1290274_+	ABC transporter permease	NA	NA	NA	NA
AUL00070.1\|1290281_1291517_+	hypothetical protein	NA	NA	NA	NA
AUL02432.1\|1291509_1291944_+	aconitase subunit 2	NA	NA	NA	NA
AUL00071.1\|1292693_1293644_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00072.1\|1293623_1294205_-	hypothetical protein	NA	NA	NA	NA
AUL00073.1\|1294265_1295993_-	sodium-independent anion transporter	NA	NA	NA	NA
AUL00074.1\|1296104_1297463_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AUL00075.1\|1297991_1298705_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00076.1\|1298745_1299816_+	hypothetical protein	NA	NA	NA	NA
AUL00077.1\|1299838_1300717_-	hypothetical protein	NA	NA	NA	NA
AUL00078.1\|1300888_1301860_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUL00079.1\|1302022_1302865_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL00080.1\|1303026_1303707_+	anti-sigma factor	NA	NA	NA	NA
AUL00081.1\|1303700_1304870_+	amine oxidase	NA	NA	NA	NA
AUL00082.1\|1304866_1305898_+	alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.8e-26	27.8
AUL00083.1\|1305965_1307183_+	MFS transporter	NA	NA	NA	NA
AUL00084.1\|1307217_1308750_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUL00085.1\|1308830_1309454_+	transcriptional regulator	NA	NA	NA	NA
AUL00086.1\|1309484_1310096_+	RhtB family transporter	NA	NA	NA	NA
AUL00087.1\|1310131_1310602_+	histidine kinase	NA	NA	NA	NA
AUL00088.1\|1310776_1311025_+	hypothetical protein	NA	NA	NA	NA
AUL00089.1\|1311032_1312037_+	peptidase M20	NA	NA	NA	NA
AUL00090.1\|1312073_1313588_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL00091.1\|1313591_1314551_+	ABC transporter	NA	NA	NA	NA
AUL00092.1\|1314579_1315383_+	peptide ABC transporter permease	NA	NA	NA	NA
AUL00093.1\|1315384_1317019_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-15	31.1
AUL00094.1\|1317102_1318164_+	LacI family transcriptional regulator	NA	NA	NA	NA
AUL00095.1\|1318635_1319160_+	DNA-binding protein	J9Q7G7	Salmonella_phage	6.5e-09	32.9
AUL00096.1\|1319623_1320526_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00097.1\|1320522_1321557_-	hydrolase	NA	NA	NA	NA
AUL00098.1\|1321665_1322304_+	hypothetical protein	NA	NA	NA	NA
AUL00099.1\|1322598_1322826_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUL00100.1\|1322948_1323662_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AUL00101.1\|1323906_1324857_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00102.1\|1324996_1325242_+	hypothetical protein	NA	NA	NA	NA
AUL00103.1\|1325356_1326805_-	2-aminoadipate aminotransferase	NA	NA	NA	NA
AUL00104.1\|1328008_1328911_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

1417552 : 1469705

Salmonella_phage(25.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL00184.1\|1417552_1418503_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00185.1\|1418669_1419023_+	cytochrome C	NA	NA	NA	NA
AUL00186.1\|1419035_1419398_+	cytochrome	NA	NA	NA	NA
AUL00187.1\|1419439_1419865_-	hypothetical protein	NA	NA	NA	NA
AUL00188.1\|1420067_1421324_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.2e-11	64.8
AUL00189.1\|1421522_1422503_+	hypothetical protein	NA	NA	NA	NA
AUL00190.1\|1422652_1423894_+	hypothetical protein	NA	NA	NA	NA
AUL00191.1\|1423992_1424943_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00192.1\|1424951_1425647_-	two-component system response regulator KdpE	NA	NA	NA	NA
AUL00193.1\|1425688_1428403_-	two-component sensor histidine kinase	NA	NA	NA	NA
AUL00194.1\|1428468_1429068_-	potassium-transporting ATPase subunit C	NA	NA	NA	NA
AUL00195.1\|1429078_1431244_-	potassium-transporting ATPase subunit B	M1HBF8	Paramecium_bursaria_Chlorella_virus	1.2e-24	27.1
AUL00196.1\|1431267_1433052_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
AUL00197.1\|1433051_1433141_-	potassium-transporting ATPase subunit F	NA	NA	NA	NA
AUL00198.1\|1433835_1434108_+	hypothetical protein	NA	NA	NA	NA
AUL00199.1\|1434107_1436174_+	cation acetate symporter	NA	NA	NA	NA
AUL00200.1\|1436170_1437073_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00201.1\|1437219_1438170_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00202.1\|1438285_1438618_-	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA
AUL00203.1\|1438614_1439301_-	DNA mismatch repair protein MutS	NA	NA	NA	NA
AUL00204.1\|1439287_1440247_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.1e-57	40.2
AUL00205.1\|1440279_1442649_+	cell division protein FtsK	S5VNE3	Mycobacterium_phage	7.6e-81	48.0
AUL00206.1\|1442648_1443281_+	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AUL00207.1\|1443382_1444723_+	recombination factor protein RarA	G3MBE0	Bacillus_virus	1.6e-75	38.9
AUL00208.1\|1444769_1446125_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-83	47.5
AUL00209.1\|1446415_1446652_+	hypothetical protein	NA	NA	NA	NA
AUL00210.1\|1446839_1447157_-	virulence factor	NA	NA	NA	NA
AUL00211.1\|1447429_1447945_-	hypothetical protein	T1SAR8	Salmonella_phage	5.1e-06	44.6
AUL00212.1\|1448038_1448200_+	hypothetical protein	NA	NA	NA	NA
AUL00213.1\|1448215_1448971_-	GGDEF domain-containing protein	NA	NA	NA	NA
AUL00214.1\|1449309_1449516_+	hypothetical protein	NA	NA	NA	NA
AUL00215.1\|1449523_1450183_-	antibiotic resistance protein	NA	NA	NA	NA
AUL00216.1\|1450477_1452682_-	porin	NA	NA	NA	NA
AUL00217.1\|1452792_1454016_-	multidrug transporter	S4TR35	Salmonella_phage	9.8e-24	29.4
AUL00218.1\|1454138_1455113_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUL00219.1\|1455180_1456374_-	Rieske (2Fe-2S) protein	NA	NA	NA	NA
AUL00220.1\|1456388_1457189_-	siderophore ferric iron reductase	NA	NA	NA	NA
AUL00221.1\|1457185_1459042_-	IucA/IucC family protein	NA	NA	NA	NA
AUL00222.1\|1459038_1459644_-	siderophore biosynthesis protein	NA	NA	NA	NA
AUL00223.1\|1459662_1461048_-	alcaligin biosynthesis protein	NA	NA	NA	NA
AUL00224.1\|1461773_1463000_+	transporter	NA	NA	NA	NA
AUL00225.1\|1463088_1463871_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
AUL00226.1\|1464017_1464920_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00227.1\|1464946_1465720_+	peroxide stress protein YaaA	NA	NA	NA	NA
AUL00228.1\|1465731_1466973_+	hypothetical protein	NA	NA	NA	NA
AUL00229.1\|1468802_1469705_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

1571540 : 1642646

Ectocarpus_siliculosus_virus(11.11%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL00322.1\|1571540_1572491_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00323.1\|1572512_1573733_+	YggW family oxidoreductase	NA	NA	NA	NA
AUL00324.1\|1573918_1575331_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
AUL00325.1\|1575394_1576462_+	PAS domain-containing sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	1.1e-05	23.5
AUL00326.1\|1576461_1577949_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA
AUL02445.1\|1577958_1578903_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL00327.1\|1579062_1579761_+	quercetin 2,3-dioxygenase	NA	NA	NA	NA
AUL00328.1\|1579838_1580744_+	hypothetical protein	NA	NA	NA	NA
AUL00329.1\|1580763_1581666_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00330.1\|1581812_1582607_-	ABC transporter	G9BWD6	Planktothrix_phage	8.3e-16	29.4
AUL00331.1\|1582611_1584282_-	iron ABC transporter permease	NA	NA	NA	NA
AUL00332.1\|1584405_1585455_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL00333.1\|1585776_1586553_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
AUL00334.1\|1586617_1587520_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL00335.1\|1588813_1589617_+	2,5-didehydrogluconate reductase B	A0A2H4PQR8	Staphylococcus_phage	2.0e-33	32.4
AUL00336.1\|1592310_1592697_+	reactive intermediate/imine deaminase	NA	NA	NA	NA
AUL00337.1\|1592712_1594803_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
AUL00338.1\|1594854_1595808_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	7.2e-14	26.5
AUL02446.1\|1595822_1596710_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL00339.1\|1596847_1598374_+	methylmalonate-semialdehyde dehydrogenase (acylating)	NA	NA	NA	NA
AUL02447.1\|1598472_1598973_+	DNA starvation/stationary phase protection protein	W5S6G8	Pithovirus	6.4e-14	35.5
AUL00340.1\|1599296_1601252_-	capsular biosynthesis protein	NA	NA	NA	NA
AUL00341.1\|1601419_1603504_-	hypothetical protein	NA	NA	NA	NA
AUL02448.1\|1603530_1603956_-	hypothetical protein	NA	NA	NA	NA
AUL00342.1\|1605171_1605942_+	polyhydroxyalkanoate biosynthesis repressor PhaR	NA	NA	NA	NA
AUL00343.1\|1605941_1606682_+	sugar ABC transporter ATP-binding protein	NA	NA	NA	NA
AUL00344.1\|1606723_1607893_+	capsule biosynthesis protein	NA	NA	NA	NA
AUL00345.1\|1607924_1610009_+	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA
AUL00346.1\|1610005_1610896_+	capsular biosynthesis protein	NA	NA	NA	NA
AUL00347.1\|1610892_1611990_+	capsule biosynthesis protein CapA	NA	NA	NA	NA
AUL00348.1\|1612012_1613302_+	Vi polysaccharide biosynthesis protein VipA/TviB	NA	NA	NA	NA
AUL00349.1\|1613313_1614339_+	LPS biosynthesis protein WbpP	A0A2K9L4U8	Tupanvirus	4.7e-72	44.2
AUL00350.1\|1614335_1616393_+	beta-3-deoxy-D-manno-oct-2-ulosonic acid transferase	NA	NA	NA	NA
AUL00351.1\|1616406_1617582_+	capsule biosynthesis protein CapA	NA	NA	NA	NA
AUL00352.1\|1617663_1618614_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00353.1\|1618672_1619446_+	short-chain dehydrogenase	NA	NA	NA	NA
AUL00354.1\|1619438_1620995_+	capsular biosynthesis protein	NA	NA	NA	NA
AUL00355.1\|1620991_1621942_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00356.1\|1623268_1623871_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUL00357.1\|1624110_1624812_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AUL00358.1\|1624805_1625588_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	A0A2R8FG22	Brazilian_cedratvirus	2.0e-09	25.8
AUL00359.1\|1625772_1626723_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00360.1\|1626821_1627559_-	hypothetical protein	A0A0S4KZH7	Pseudomonas_phage	4.1e-41	46.6
AUL00361.1\|1627748_1628507_-	short-chain dehydrogenase	NA	NA	NA	NA
AUL00362.1\|1628553_1629555_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL00363.1\|1629720_1630689_-	phenol degradation protein meta	NA	NA	NA	NA
AUL00364.1\|1632228_1633197_+	AAA family ATPase	NA	NA	NA	NA
AUL00365.1\|1633205_1634147_+	MoxR protein	NA	NA	NA	NA
AUL02449.1\|1634620_1635631_+	hypothetical protein	NA	NA	NA	NA
AUL02451.1\|1635621_1637136_+	hypothetical protein	NA	NA	NA	NA
AUL00366.1\|1637132_1638479_+	hypothetical protein	NA	NA	NA	NA
AUL02450.1\|1638481_1639516_+	haloacid dehalogenase	NA	NA	NA	NA
AUL00367.1\|1639565_1641191_+	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	2.0e-149	52.2
AUL00368.1\|1641284_1641764_+	hypothetical protein	NA	NA	NA	NA
AUL00369.1\|1641743_1642646_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_14

1663485 : 1724833

uncultured_Caudovirales_phage(12.5%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL00386.1\|1663485_1664436_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00387.1\|1664544_1664733_+	hypothetical protein	NA	NA	NA	NA
AUL02454.1\|1664729_1665452_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-87	68.2
AUL00388.1\|1665890_1667078_-	hypothetical protein	NA	NA	NA	NA
AUL02455.1\|1667081_1667432_-	transcriptional regulator	NA	NA	NA	NA
AUL00389.1\|1667665_1669078_-	hypothetical protein	NA	NA	NA	NA
AUL00390.1\|1669181_1670153_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL00391.1\|1670166_1670880_+	3-oxoacyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA
AUL00392.1\|1670884_1671802_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL00393.1\|1671908_1672205_+	hypothetical protein	NA	NA	NA	NA
AUL00394.1\|1672351_1673254_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00395.1\|1674412_1677346_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA
AUL00396.1\|1677345_1677690_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA
AUL00397.1\|1677686_1679315_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA
AUL00398.1\|1679314_1679791_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA
AUL00399.1\|1679790_1680072_+	K+/H+ antiporter subunit F	NA	NA	NA	NA
AUL00400.1\|1680068_1680395_+	cation:proton antiporter	NA	NA	NA	NA
AUL00401.1\|1680550_1681501_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00402.1\|1681544_1682087_+	hypothetical protein	NA	NA	NA	NA
AUL00403.1\|1682184_1683033_+	hydrolase	NA	NA	NA	NA
AUL02456.1\|1683082_1683532_+\|tRNA	tRNA-specific adenosine deaminase	S4VYT2	Pandoravirus	2.0e-06	38.2
AUL00404.1\|1683528_1684530_+	LD-carboxypeptidase	NA	NA	NA	NA
AUL00405.1\|1684542_1685337_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUL00406.1\|1685385_1687287_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUL00407.1\|1687283_1687907_-	hypothetical protein	NA	NA	NA	NA
AUL00408.1\|1688033_1689158_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUL00409.1\|1689538_1691143_+	ABC-F family ATPase	A0A1V0SKJ1	Klosneuvirus	1.2e-53	28.9
AUL00410.1\|1691298_1692075_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-30	34.2
AUL00411.1\|1692159_1693158_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL00412.1\|1693154_1693928_+	ABC transporter permease	NA	NA	NA	NA
AUL00413.1\|1694912_1695863_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00414.1\|1695886_1696351_-\|tRNA	glutamyl-tRNA amidotransferase	A0A0K2FLI9	Brevibacillus_phage	3.9e-05	32.4
AUL00415.1\|1696497_1697706_+	nitric oxide dioxygenase	NA	NA	NA	NA
AUL00416.1\|1697749_1698187_+	BadM/Rrf2 family transcriptional regulator	NA	NA	NA	NA
AUL00417.1\|1698305_1699595_+	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA
AUL00418.1\|1702335_1703238_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00419.1\|1703384_1704401_-	folate-binding protein YgfZ	NA	NA	NA	NA
AUL00420.1\|1704579_1705614_+	aminodeoxychorismate lyase	NA	NA	NA	NA
AUL00421.1\|1705610_1706237_+	dTMP kinase	A0A1L2BX49	Bacteriophage	1.6e-22	35.1
AUL00422.1\|1706233_1707286_+	DNA polymerase III subunit delta'	NA	NA	NA	NA
AUL00423.1\|1707335_1708106_+	DNAase	NA	NA	NA	NA
AUL00424.1\|1708156_1708993_+	hypothetical protein	NA	NA	NA	NA
AUL00425.1\|1709188_1709929_+	IclR family transcriptional regulator	NA	NA	NA	NA
AUL00426.1\|1710003_1710747_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL00427.1\|1711408_1712182_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-31	37.7
AUL02457.1\|1713319_1714609_+	glutamate dehydrogenase	NA	NA	NA	NA
AUL00428.1\|1716219_1717467_-	Zn-dependent hydrolase	NA	NA	NA	NA
AUL00429.1\|1717476_1719186_-	thiamine pyrophosphate-binding protein	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.9e-35	27.3
AUL00430.1\|1719182_1720121_-	CoA ester lyase	NA	NA	NA	NA
AUL00431.1\|1720117_1721401_-	C4-dicarboxylate ABC transporter permease	NA	NA	NA	NA
AUL00432.1\|1721404_1721887_-	TRAP transporter small permease protein	NA	NA	NA	NA
AUL00433.1\|1721887_1722874_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL00434.1\|1723046_1723766_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUL00435.1\|1723882_1724833_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

1831020 : 1902530

Klosneuvirus(22.22%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL00514.1\|1831020_1831971_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00515.1\|1832095_1832905_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUL00516.1\|1833153_1834056_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00517.1\|1835329_1836547_+	hypothetical protein	NA	NA	NA	NA
AUL00518.1\|1836543_1837599_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
AUL00519.1\|1837603_1838506_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUL00520.1\|1838582_1839455_+	MOSC domain-containing protein	NA	NA	NA	NA
AUL00521.1\|1839585_1839954_+	aspartate 1-decarboxylase	NA	NA	NA	NA
AUL00522.1\|1840011_1841058_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
AUL00523.1\|1841253_1842510_+	amino acid dehydrogenase	NA	NA	NA	NA
AUL00524.1\|1842514_1843852_+	glycerol-3-phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL00525.1\|1844001_1844958_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL00526.1\|1846415_1846781_+	hypothetical protein	NA	NA	NA	NA
AUL00527.1\|1846828_1848403_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL00528.1\|1848455_1849400_+	peptide ABC transporter	NA	NA	NA	NA
AUL02464.1\|1849327_1850248_+	peptide ABC transporter permease	NA	NA	NA	NA
AUL00529.1\|1850240_1851875_+	microcin ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.2e-18	32.7
AUL00530.1\|1851871_1853227_+	amidase	NA	NA	NA	NA
AUL00531.1\|1854133_1855711_+	hypothetical protein	NA	NA	NA	NA
AUL00532.1\|1855714_1856989_+	hypothetical protein	NA	NA	NA	NA
AUL02465.1\|1857086_1857461_+	hypothetical protein	NA	NA	NA	NA
AUL00533.1\|1859176_1860310_+	general secretion pathway protein	NA	NA	NA	NA
AUL00534.1\|1860347_1860953_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
AUL00535.1\|1860949_1861768_+	hypothetical protein	NA	NA	NA	NA
AUL00536.1\|1861839_1864464_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-81	39.4
AUL00537.1\|1864450_1864705_+	hypothetical protein	NA	NA	NA	NA
AUL00538.1\|1864771_1865353_-	hypothetical protein	NA	NA	NA	NA
AUL00539.1\|1865656_1865917_+	30S ribosomal protein S16	NA	NA	NA	NA
AUL00540.1\|1866082_1866706_+	ribosome maturation factor RimM	NA	NA	NA	NA
AUL00541.1\|1866705_1867479_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AUL00542.1\|1867475_1868684_-	class V aminotransferase	NA	NA	NA	NA
AUL00543.1\|1868709_1869183_-	hypothetical protein	NA	NA	NA	NA
AUL00544.1\|1869256_1870207_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00545.1\|1870305_1871208_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00546.1\|1871354_1872704_-	two-component sensor histidine kinase	NA	NA	NA	NA
AUL00547.1\|1873469_1874225_+	hypothetical protein	NA	NA	NA	NA
AUL00548.1\|1874317_1877200_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.7e-138	37.1
AUL00549.1\|1877522_1877948_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.1e-21	43.2
AUL00550.1\|1877975_1879124_+	23S rRNA (adenine(2503)-C(2))-methyltransferase	NA	NA	NA	NA
AUL00551.1\|1879120_1879627_+	transcriptional regulator	NA	NA	NA	NA
AUL00552.1\|1879642_1880929_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	NA	NA	NA	NA
AUL02466.1\|1880978_1882274_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
AUL00553.1\|1882275_1882914_+	hypothetical protein	NA	NA	NA	NA
AUL02467.1\|1882919_1884077_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA
AUL00554.1\|1884103_1885459_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
AUL00555.1\|1885462_1886533_+	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	2.5e-15	25.7
AUL00556.1\|1886671_1886908_+	RNA chaperone Hfq	NA	NA	NA	NA
AUL00557.1\|1886995_1888102_+	GTPase HflX	NA	NA	NA	NA
AUL00558.1\|1888067_1889372_+	HflK protein	NA	NA	NA	NA
AUL00559.1\|1889390_1890290_+	HflC protein	NA	NA	NA	NA
AUL00560.1\|1890473_1891631_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA
AUL00561.1\|1891707_1893003_+	adenylosuccinate synthase	A0A160ER07	Powai_lake_megavirus	3.0e-63	33.5
AUL00562.1\|1893116_1893656_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
AUL00563.1\|1893933_1894146_+	30S ribosomal protein S21	NA	NA	NA	NA
AUL00564.1\|1894165_1896196_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.0e-65	41.9
AUL00565.1\|1896881_1899164_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	3.2e-36	30.1
AUL00566.1\|1899573_1899873_-	hypothetical protein	NA	NA	NA	NA
AUL00567.1\|1900157_1900571_+	transcriptional regulator	A0A222YXG1	Escherichia_phage	3.8e-36	59.0
AUL00568.1\|1900530_1901481_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00569.1\|1901579_1902530_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

1913782 : 1963129

Klosneuvirus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL00580.1\|1913782_1914685_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00581.1\|1914681_1915956_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	9.6e-14	28.9
AUL00582.1\|1916059_1917253_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
AUL00583.1\|1917249_1917903_+	alpha/beta hydrolase	NA	NA	NA	NA
AUL00584.1\|1917899_1919336_+	dethiobiotin synthase	NA	NA	NA	NA
AUL00585.1\|1919323_1919683_+	CidA/LrgA family protein	NA	NA	NA	NA
AUL00586.1\|1919768_1920419_+	hypothetical protein	NA	NA	NA	NA
AUL00587.1\|1920703_1921606_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00588.1\|1922650_1924516_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AUL02471.1\|1924773_1926294_+	aldehyde dehydrogenase	NA	NA	NA	NA
AUL00589.1\|1926381_1927032_-	NAD(P)H dehydrogenase	NA	NA	NA	NA
AUL00590.1\|1927980_1929276_+	hypothetical protein	NA	NA	NA	NA
AUL00591.1\|1929297_1930182_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL02472.1\|1930280_1931156_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AUL00592.1\|1931145_1931502_-	RNA signal recognition particle	NA	NA	NA	NA
AUL00593.1\|1931632_1932607_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUL00594.1\|1932736_1932916_-	DUF3008 domain-containing protein	NA	NA	NA	NA
AUL00595.1\|1933058_1933538_+	hypothetical protein	NA	NA	NA	NA
AUL00596.1\|1933548_1934385_-	alpha/beta hydrolase	NA	NA	NA	NA
AUL00597.1\|1934497_1934869_+	transcriptional regulator	NA	NA	NA	NA
AUL00598.1\|1934865_1935417_+	ATPase	NA	NA	NA	NA
AUL00599.1\|1935432_1937124_-	sodium-independent anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	5.0e-42	27.3
AUL00600.1\|1937172_1937853_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUL00601.1\|1938100_1938565_-	hypothetical protein	NA	NA	NA	NA
AUL00602.1\|1938734_1939664_+	hypothetical protein	NA	NA	NA	NA
AUL02473.1\|1939676_1940270_-	hypothetical protein	NA	NA	NA	NA
AUL00603.1\|1940397_1942215_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-37	27.4
AUL00604.1\|1942298_1943249_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL02474.1\|1943347_1943827_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUL00605.1\|1943949_1944852_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00606.1\|1944870_1945218_-	aldehyde-activating protein	NA	NA	NA	NA
AUL00607.1\|1945246_1946686_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	7.4e-55	37.4
AUL00608.1\|1946704_1947100_-	hypothetical protein	NA	NA	NA	NA
AUL00609.1\|1947274_1947883_+	peptidase S16	NA	NA	NA	NA
AUL00610.1\|1947895_1948714_+	hypothetical protein	A0A1B1INV8	uncultured_Mediterranean_phage	2.3e-16	28.8
AUL00611.1\|1948665_1949640_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUL00612.1\|1949668_1950730_-	hypothetical protein	NA	NA	NA	NA
AUL00613.1\|1950726_1952943_-	aldehyde oxidase	NA	NA	NA	NA
AUL00614.1\|1952956_1953415_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
AUL00615.1\|1953572_1953917_-	hypothetical protein	NA	NA	NA	NA
AUL00616.1\|1954073_1954979_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL02475.1\|1955065_1956079_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AUL00617.1\|1958058_1959075_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL00618.1\|1959217_1960570_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	2.9e-45	27.6
AUL00619.1\|1960744_1961041_+	hypothetical protein	NA	NA	NA	NA
AUL00620.1\|1961187_1962192_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00621.1\|1962226_1963129_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_17

2170524 : 2220176

uncultured_Mediterranean_phage(16.67%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL00780.1\|2170524_2171475_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL02488.1\|2171573_2172971_-	rRNA methyltransferase	NA	NA	NA	NA
AUL00781.1\|2173627_2174593_+	riboflavin biosynthesis protein RibF	NA	NA	NA	NA
AUL00782.1\|2174582_2177444_+\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	1.0e-71	25.5
AUL00783.1\|2177446_2177953_+	signal peptidase II	NA	NA	NA	NA
AUL00784.1\|2178057_2179266_+	phosphopantothenate synthase	Q9HH70	Methanothermobacter_phage	3.8e-36	30.0
AUL00785.1\|2179267_2180206_-	hypothetical protein	NA	NA	NA	NA
AUL00786.1\|2180367_2180841_+	AsnC family transcriptional regulator	NA	NA	NA	NA
AUL00787.1\|2180837_2181788_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00788.1\|2181898_2182339_-	hypothetical protein	NA	NA	NA	NA
AUL00789.1\|2182467_2183697_-	lytic transglycosylase	NA	NA	NA	NA
AUL00790.1\|2183735_2184557_-	hypothetical protein	NA	NA	NA	NA
AUL00791.1\|2184610_2185762_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUL00792.1\|2185853_2186324_-	hypothetical protein	NA	NA	NA	NA
AUL00793.1\|2188892_2191442_+	cyanophycin synthetase	NA	NA	NA	NA
AUL00794.1\|2191512_2194086_+	cyanophycin synthetase	NA	NA	NA	NA
AUL00795.1\|2194351_2194552_+	general stress protein CsbD	NA	NA	NA	NA
AUL00796.1\|2194583_2194745_+	DUF1328 domain-containing protein	NA	NA	NA	NA
AUL00797.1\|2194802_2195141_+	phospholipid-binding protein	NA	NA	NA	NA
AUL00798.1\|2195289_2196192_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00799.1\|2197013_2197682_+	arylesterase	NA	NA	NA	NA
AUL02489.1\|2197663_2199619_-	peptidylprolyl isomerase	NA	NA	NA	NA
AUL00800.1\|2199861_2200611_+	glycerophosphodiester phosphodiesterase	A0A2H4PGQ5	Escherichia_phage	1.5e-14	27.8
AUL00801.1\|2200623_2201487_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
AUL00802.1\|2201490_2202906_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
AUL00803.1\|2203039_2203768_-	glutathione peroxidase	A0A1D8KSL1	Synechococcus_phage	9.6e-43	56.8
AUL00804.1\|2203906_2204107_-	heavy metal transporter	NA	NA	NA	NA
AUL00805.1\|2204282_2204681_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
AUL00806.1\|2204704_2206105_-	23S rRNA (uracil(1939)-C(5))-methyltransferase	A0A2K5B251	Erysipelothrix_phage	7.3e-31	26.5
AUL00807.1\|2206223_2206976_-	hypothetical protein	NA	NA	NA	NA
AUL00808.1\|2207264_2207864_-	hypothetical protein	NA	NA	NA	NA
AUL00809.1\|2207968_2208748_-	3'-5' exonuclease	NA	NA	NA	NA
AUL00810.1\|2208744_2209629_-	peptidase	A0A292GJG6	Xanthomonas_phage	4.6e-15	49.5
AUL00811.1\|2209646_2210426_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.8e-32	46.9
AUL00812.1\|2210410_2211169_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-68	51.2
AUL02490.1\|2211306_2211942_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AUL00813.1\|2212209_2213226_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL00814.1\|2213323_2214364_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.1e-91	51.3
AUL00815.1\|2214498_2215791_+	guanine permease	A0A0R6PHV4	Moraxella_phage	1.7e-66	36.0
AUL00816.1\|2217150_2217534_+	thiol reductase thioredoxin	V9SJ74	Achromobacter_phage	8.1e-09	25.8
AUL00817.1\|2217551_2218139_-	thymidylate synthase	A0A1X9I5T8	Streptococcus_phage	4.7e-16	35.8
AUL00818.1\|2218176_2219079_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL00819.1\|2219225_2220176_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

2839355 : 2905185

Pelagibacter_phage(16.67%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL01320.1\|2839355_2840306_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01321.1\|2840440_2841547_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL01322.1\|2841557_2842655_+	cyclic pyranopterin phosphate synthase	NA	NA	NA	NA
AUL01323.1\|2842799_2844005_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA
AUL01324.1\|2844011_2844533_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA
AUL02539.1\|2844529_2845012_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA
AUL01325.1\|2845017_2845269_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA
AUL01326.1\|2845249_2845735_-	molybdenum cofactor biosynthesis protein C	NA	NA	NA	NA
AUL01327.1\|2845870_2849332_+	hypothetical protein	NA	NA	NA	NA
AUL01328.1\|2849349_2850234_+	carboxymethylenebutenolidase	NA	NA	NA	NA
AUL01329.1\|2850243_2850675_-	hypothetical protein	NA	NA	NA	NA
AUL02540.1\|2850921_2851425_+	peroxiredoxin	M1I839	Pelagibacter_phage	1.8e-24	44.1
AUL01330.1\|2851502_2852903_+	MFS transporter	NA	NA	NA	NA
AUL01331.1\|2852977_2853853_-	hypothetical protein	NA	NA	NA	NA
AUL02541.1\|2853849_2854857_-	biotin synthase BioB	NA	NA	NA	NA
AUL01332.1\|2855324_2855630_+	hypothetical protein	NA	NA	NA	NA
AUL01333.1\|2855720_2856311_+	TetR family transcriptional regulator	NA	NA	NA	NA
AUL01334.1\|2856501_2857518_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL01335.1\|2857709_2860046_-	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.2e-124	42.8
AUL01336.1\|2860128_2860563_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
AUL01337.1\|2860897_2861611_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01338.1\|2862654_2863449_-	N-formylglutamate deformylase	NA	NA	NA	NA
AUL01339.1\|2863480_2864185_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUL01340.1\|2864259_2865060_-	hypothetical protein	NA	NA	NA	NA
AUL01341.1\|2865056_2865464_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
AUL01342.1\|2865460_2866102_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
AUL02542.1\|2866094_2868095_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
AUL01343.1\|2869355_2870687_+	arabinose ABC transporter permease	NA	NA	NA	NA
AUL01344.1\|2870683_2871586_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01345.1\|2873339_2873606_-	hypothetical protein	NA	NA	NA	NA
AUL01346.1\|2874313_2874652_+	transcriptional regulator	NA	NA	NA	NA
AUL01347.1\|2875980_2878260_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AUL01348.1\|2878237_2878942_-	hypothetical protein	NA	NA	NA	NA
AUL01349.1\|2879204_2879807_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUL01350.1\|2879903_2881193_+	MFS transporter	NA	NA	NA	NA
AUL01351.1\|2881250_2881982_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-12	31.0
AUL01352.1\|2881978_2882782_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.9e-14	23.5
AUL01353.1\|2882778_2883867_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AUL01354.1\|2883863_2884793_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUL01355.1\|2884941_2886087_-	branched chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL01356.1\|2887388_2891210_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
AUL01357.1\|2891366_2892035_-	hypothetical protein	NA	NA	NA	NA
AUL01358.1\|2892039_2893713_-	paraquat-inducible protein B	NA	NA	NA	NA
AUL01359.1\|2893731_2895051_-	paraquat-inducible membrane protein A	NA	NA	NA	NA
AUL01360.1\|2895055_2897371_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.1e-164	41.9
AUL02543.1\|2897426_2899595_-	penicillin-binding protein 1C	NA	NA	NA	NA
AUL02544.1\|2899591_2904157_-	alpha-2-macroglobulin	NA	NA	NA	NA
AUL01361.1\|2904870_2905185_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-10	43.8

DBSCAN-SWA_19

2911415 : 2970748

Vibrio_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL01368.1\|2911415_2912366_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01369.1\|2912646_2913267_+	flagellar motor protein MotA	NA	NA	NA	NA
AUL01370.1\|2913263_2913677_+	biopolymer transporter ExbD	NA	NA	NA	NA
AUL01371.1\|2913673_2914717_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AUL01372.1\|2914772_2914961_+	hypothetical protein	NA	NA	NA	NA
AUL01373.1\|2914970_2915735_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AUL01374.1\|2915825_2916482_+	adenylate kinase	NA	NA	NA	NA
AUL01375.1\|2916573_2917332_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AUL01376.1\|2917357_2918959_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
AUL01377.1\|2919159_2920164_+	iron dicitrate transport regulator FecR	NA	NA	NA	NA
AUL01378.1\|2920264_2920528_+	30S ribosomal protein S20	NA	NA	NA	NA
AUL01379.1\|2920645_2921422_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
AUL01380.1\|2922012_2922963_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01381.1\|2925346_2926459_-	malate dehydrogenase	NA	NA	NA	NA
AUL01382.1\|2926515_2927466_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01383.1\|2927673_2927895_-	hypothetical protein	NA	NA	NA	NA
AUL01384.1\|2928108_2929515_-	threonine synthase	NA	NA	NA	NA
AUL01385.1\|2929511_2930816_-	homoserine dehydrogenase	NA	NA	NA	NA
AUL01386.1\|2930812_2932000_-	alanine transaminase	NA	NA	NA	NA
AUL01387.1\|2932216_2932669_+	hypothetical protein	NA	NA	NA	NA
AUL01388.1\|2932671_2933136_+	peroxiredoxin	NA	NA	NA	NA
AUL01389.1\|2933215_2934895_+	phosphate starvation-inducible protein PhoH	A0A2I7SAD7	Vibrio_phage	7.3e-70	36.7
AUL01390.1\|2934999_2935977_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
AUL01391.1\|2936056_2937025_+	bile acid:sodium symporter	NA	NA	NA	NA
AUL01392.1\|2937045_2938419_-	replicative DNA helicase	C7BGG1	Burkholderia_phage	4.0e-135	58.2
AUL01393.1\|2938415_2939252_-	hypothetical protein	NA	NA	NA	NA
AUL01394.1\|2939368_2939824_-	50S ribosomal protein L9	NA	NA	NA	NA
AUL01395.1\|2939839_2940112_-	30S ribosomal protein S18	NA	NA	NA	NA
AUL01396.1\|2940204_2940528_-	primosomal replication protein N	NA	NA	NA	NA
AUL01397.1\|2940575_2940956_-	30S ribosomal protein S6	NA	NA	NA	NA
AUL01398.1\|2941175_2941973_-	GTP cyclohydrolase	NA	NA	NA	NA
AUL01399.1\|2942129_2943992_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
AUL01400.1\|2944041_2944953_-	geranyl transferase	NA	NA	NA	NA
AUL01401.1\|2944957_2945224_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
AUL02545.1\|2945310_2946141_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUL01402.1\|2946315_2947281_+	MFS transporter	NA	NA	NA	NA
AUL01403.1\|2947451_2948462_+	hypothetical protein	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	3.6e-16	24.6
AUL01404.1\|2948609_2949761_+	Rieske (2Fe-2S) protein	NA	NA	NA	NA
AUL01405.1\|2949844_2950708_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01406.1\|2950903_2952376_-	magnesium transporter	NA	NA	NA	NA
AUL01407.1\|2952386_2952797_-	acyl-CoA thioesterase	NA	NA	NA	NA
AUL01408.1\|2952860_2953907_-	hypothetical protein	NA	NA	NA	NA
AUL01409.1\|2954013_2954892_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL01410.1\|2954905_2956102_-	amidohydrolase	NA	NA	NA	NA
AUL01411.1\|2956163_2957855_+	long-chain fatty acid--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	9.4e-33	28.1
AUL01412.1\|2957851_2958754_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01413.1\|2958922_2959819_-	inositol monophosphatase	NA	NA	NA	NA
AUL01414.1\|2962096_2964322_+	glycosyl hydrolase	NA	NA	NA	NA
AUL01415.1\|2964486_2965575_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.7e-32	36.4
AUL01416.1\|2965531_2966185_+	DL-methionine transporter permease subunit	NA	NA	NA	NA
AUL01417.1\|2966232_2967030_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL01418.1\|2967609_2968512_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01419.1\|2968592_2969741_+	alcohol dehydrogenase	NA	NA	NA	NA
AUL01420.1\|2969797_2970748_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_20

2987742 : 3033129

Ostreococcus_lucimarinus_virus(16.67%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL01436.1\|2987742_2988645_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01437.1\|2988796_2989417_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUL02548.1\|2989520_2990261_+	oxidoreductase	NA	NA	NA	NA
AUL01438.1\|2991395_2992520_-	hypothetical protein	NA	NA	NA	NA
AUL01439.1\|2992565_2992934_-	hypothetical protein	NA	NA	NA	NA
AUL01440.1\|2993175_2994078_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01441.1\|2995161_2995704_-	hypothetical protein	NA	NA	NA	NA
AUL01442.1\|2996089_2997040_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01443.1\|2997036_2997945_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL01444.1\|2998071_2998908_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	1.6e-33	33.3
AUL01445.1\|2999420_3000530_+	porin	NA	NA	NA	NA
AUL01446.1\|3000591_3001494_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01447.1\|3001734_3002517_-	short-chain dehydrogenase	NA	NA	NA	NA
AUL01448.1\|3002530_3003295_-	short-chain dehydrogenase	A0A0M4JSW6	Mollivirus	3.1e-12	26.5
AUL02549.1\|3003307_3004654_-	MFS transporter	NA	NA	NA	NA
AUL01449.1\|3004679_3005609_-	acetylxylan esterase	NA	NA	NA	NA
AUL01450.1\|3005724_3006630_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL01451.1\|3006647_3007847_-	aromatic amino acid aminotransferase	NA	NA	NA	NA
AUL01452.1\|3007919_3008612_-	hydrolase	A0A1D6Y7U0	Golden_Marseillevirus	4.7e-07	29.9
AUL01453.1\|3008660_3011087_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.2e-86	33.8
AUL01454.1\|3011131_3012082_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01455.1\|3012298_3012667_-	hypothetical protein	NA	NA	NA	NA
AUL01456.1\|3012953_3013880_+	hypothetical protein	NA	NA	NA	NA
AUL01457.1\|3013923_3014934_+	zinc-binding dehydrogenase	NA	NA	NA	NA
AUL01458.1\|3014930_3015365_+	thioesterase	NA	NA	NA	NA
AUL01459.1\|3016490_3017279_+	ABC transporter	G3M9Y6	Bacillus_virus	1.1e-33	40.0
AUL01460.1\|3017288_3018071_+	ABC transporter permease	NA	NA	NA	NA
AUL01461.1\|3018074_3019166_-	hypothetical protein	NA	NA	NA	NA
AUL01462.1\|3019271_3020747_+	acid--CoA ligase	Q75ZG1	Hepacivirus	3.0e-35	25.6
AUL01463.1\|3020888_3021437_+	cysteine dioxygenase	NA	NA	NA	NA
AUL01464.1\|3021452_3021914_-	transcriptional regulator	NA	NA	NA	NA
AUL01465.1\|3022014_3023004_-	MFS transporter	NA	NA	NA	NA
AUL01466.1\|3023302_3024004_+	riboflavin synthase subunit alpha	NA	NA	NA	NA
AUL01467.1\|3024042_3025416_-	amidase	NA	NA	NA	NA
AUL01468.1\|3027627_3028530_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL01469.1\|3028477_3029698_-	MFS transporter	NA	NA	NA	NA
AUL01470.1\|3029694_3030204_-\|tRNA	tRNA-specific adenosine deaminase	NA	NA	NA	NA
AUL01471.1\|3030193_3030889_-	hypothetical protein	NA	NA	NA	NA
AUL01472.1\|3030959_3031829_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL01473.1\|3031839_3032115_-	hypothetical protein	NA	NA	NA	NA
AUL01474.1\|3032178_3033129_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_21

3187053 : 3247984

Xanthomonas_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL01597.1\|3187053_3187956_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01598.1\|3188054_3189005_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01599.1\|3189013_3189562_+	phospholipid:lipid A palmitoyltransferase	NA	NA	NA	NA
AUL01600.1\|3189558_3190167_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
AUL02558.1\|3190349_3190808_-	transcriptional regulator	NA	NA	NA	NA
AUL01601.1\|3190826_3192083_-	amino acid dehydrogenase	NA	NA	NA	NA
AUL01602.1\|3192138_3192951_-	oxidoreductase	NA	NA	NA	NA
AUL01603.1\|3193065_3193620_+	cysteine dioxygenase	NA	NA	NA	NA
AUL01604.1\|3193629_3194619_-	hypothetical protein	NA	NA	NA	NA
AUL01605.1\|3194798_3195518_-	hypothetical protein	NA	NA	NA	NA
AUL01606.1\|3195534_3198270_-	preprotein translocase subunit SecA	NA	NA	NA	NA
AUL02559.1\|3198449_3199436_-	peptidase M23	A0A292GJG6	Xanthomonas_phage	3.4e-27	51.8
AUL01607.1\|3199564_3199972_+	flagellar hook-length control protein FliK	NA	NA	NA	NA
AUL01608.1\|3200083_3201007_-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	NA	NA	NA	NA
AUL01609.1\|3201235_3202420_-	cell division protein FtsZ	NA	NA	NA	NA
AUL01610.1\|3202608_3203835_-	cell division protein FtsA	NA	NA	NA	NA
AUL01611.1\|3203839_3204661_-	cell division protein FtsQ	NA	NA	NA	NA
AUL01612.1\|3204673_3205624_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
AUL01613.1\|3205620_3207027_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
AUL01614.1\|3207023_3208097_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA
AUL01615.1\|3208093_3209287_-	putative lipid II flippase FtsW	NA	NA	NA	NA
AUL01616.1\|3209283_3210816_-	UDP-N-acetylmuramoylalanine--D-glutamate ligase	NA	NA	NA	NA
AUL01617.1\|3210812_3211982_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA
AUL01618.1\|3211971_3214809_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
AUL01619.1\|3214805_3216536_-	cell division protein	NA	NA	NA	NA
AUL01620.1\|3216532_3216811_-	cell division protein FtsL	NA	NA	NA	NA
AUL01621.1\|3216810_3217905_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase	NA	NA	NA	NA
AUL02560.1\|3217913_3218342_-	cell division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA
AUL01622.1\|3219144_3220953_+	ABC transporter ATP-binding protein	A0A1B0RXA0	Streptococcus_phage	1.6e-43	28.6
AUL01623.1\|3220992_3222072_-	dihydroorotase	NA	NA	NA	NA
AUL01624.1\|3222068_3223262_-	peptidase M20	NA	NA	NA	NA
AUL01625.1\|3223411_3223690_+	DNA topoisomerase III	NA	NA	NA	NA
AUL01626.1\|3224018_3224384_-	hypothetical protein	NA	NA	NA	NA
AUL02561.1\|3231134_3231611_-	AsnC family transcriptional regulator	NA	NA	NA	NA
AUL01627.1\|3231763_3232876_+	4-hydroxyphenylpyruvate dioxygenase	NA	NA	NA	NA
AUL01628.1\|3232943_3233504_-	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA
AUL01629.1\|3233527_3233860_-	cytochrome C	NA	NA	NA	NA
AUL01630.1\|3233843_3235532_-	dihydroxy-acid dehydratase	NA	NA	NA	NA
AUL01631.1\|3235651_3236440_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
AUL01632.1\|3237146_3238097_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01633.1\|3238541_3238853_-	cell division protein ZapA	NA	NA	NA	NA
AUL01634.1\|3238852_3239383_-	hypothetical protein	NA	NA	NA	NA
AUL01635.1\|3239545_3240496_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01636.1\|3240785_3241250_+	tricarboxylate transporter	NA	NA	NA	NA
AUL01637.1\|3241264_3242770_+	hypothetical protein	NA	NA	NA	NA
AUL01638.1\|3243026_3244631_+	gamma-glutamyltransferase	NA	NA	NA	NA
AUL01639.1\|3244686_3245592_+	oxidoreductase	NA	NA	NA	NA
AUL01640.1\|3246032_3246935_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01641.1\|3247081_3247984_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_22

3271081 : 3334044

Tupanvirus(11.11%)

transposase,tRNA,protease,integrase

attL 3263151:3263169|attR 3335905:3335923

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3263151:3263169	attL	NA	NA	NA	NA
AUL01666.1\|3271081_3271984_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01667.1\|3272048_3273020_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL01668.1\|3273083_3274103_-	acetylpolyamine amidohydrolase	A0A2K9L473	Tupanvirus	3.4e-22	31.7
AUL01669.1\|3274104_3275445_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL02563.1\|3275755_3276436_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
AUL02564.1\|3276511_3278575_+	lytic transglycosylase	A0A0S2SXL7	Bacillus_phage	5.3e-14	36.6
AUL01670.1\|3278571_3279666_+\|tRNA	CCA tRNA nucleotidyltransferase	A0A0F6YPT7	Sinorhizobium_phage	2.4e-50	50.5
AUL01671.1\|3279680_3280871_-	hypothetical protein	NA	NA	NA	NA
AUL01672.1\|3280959_3282648_-	RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.6e-48	32.9
AUL01673.1\|3282922_3283675_-	uracil-DNA glycosylase	A0A1Y0B680	Bovine_alphaherpesvirus	2.5e-46	47.5
AUL01674.1\|3284049_3284763_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL02565.1\|3285075_3286554_+	hypothetical protein	NA	NA	NA	NA
AUL01675.1\|3286560_3287670_-	molybdenum ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.5e-23	34.5
AUL01676.1\|3287681_3288362_-	molybdenum ABC transporter permease subunit	NA	NA	NA	NA
AUL01677.1\|3288383_3289139_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL01678.1\|3289274_3290177_-	hydrolase	NA	NA	NA	NA
AUL01679.1\|3290246_3290828_+	hypothetical protein	NA	NA	NA	NA
AUL01680.1\|3290920_3291043_-	hypothetical protein	NA	NA	NA	NA
AUL01681.1\|3291088_3291388_-	hypothetical protein	NA	NA	NA	NA
AUL01682.1\|3291539_3292019_-	hypothetical protein	NA	NA	NA	NA
AUL02566.1\|3292034_3292400_-	hypothetical protein	NA	NA	NA	NA
AUL01683.1\|3294171_3294600_-	AsnC family transcriptional regulator	NA	NA	NA	NA
AUL01684.1\|3294690_3295641_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01685.1\|3296168_3296942_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL01686.1\|3297074_3298085_-	LacI family transcriptional regulator	NA	NA	NA	NA
AUL01687.1\|3298236_3299892_-	gamma-glutamyltransferase	NA	NA	NA	NA
AUL01688.1\|3299946_3300288_-	cupin	NA	NA	NA	NA
AUL01689.1\|3300301_3301741_-	amine oxidase	NA	NA	NA	NA
AUL01690.1\|3301873_3302689_-	MerR family transcriptional regulator	NA	NA	NA	NA
AUL01691.1\|3305225_3306167_+	hypothetical protein	NA	NA	NA	NA
AUL01692.1\|3306393_3307134_+	TetR family transcriptional regulator	NA	NA	NA	NA
AUL01693.1\|3307219_3308122_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01694.1\|3309611_3311183_-	transcriptional regulator	NA	NA	NA	NA
AUL01695.1\|3313412_3315977_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AUL01696.1\|3318129_3318414_-	hypothetical protein	A0A1V0SIN4	Klosneuvirus	6.8e-05	34.1
AUL01697.1\|3318495_3319407_-	hypothetical protein	NA	NA	NA	NA
AUL01698.1\|3319476_3319722_+	hypothetical protein	NA	NA	NA	NA
AUL01699.1\|3319950_3320208_-	hypothetical protein	NA	NA	NA	NA
AUL01700.1\|3321855_3323067_-	chromosome segregation protein SMC	NA	NA	NA	NA
AUL01701.1\|3323082_3326034_-	site-specific DNA-methyltransferase	G8I4P9	Mycobacterium_phage	2.9e-21	25.1
AUL02567.1\|3326035_3328792_-	restriction endonuclease	NA	NA	NA	NA
AUL01702.1\|3329302_3330349_-	cell filamentation protein Fic	NA	NA	NA	NA
AUL01703.1\|3330690_3331818_-\|integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	1.4e-48	33.6
AUL01704.1\|3332097_3333189_-	redox-regulated ATPase YchF	NA	NA	NA	NA
AUL01705.1\|3333261_3334044_-\|protease	CAAX protease	NA	NA	NA	NA
3335905:3335923	attR	NA	NA	NA	NA

DBSCAN-SWA_23

3403436 : 3467267

Staphylococcus_phage(12.5%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL01759.1\|3403436_3404339_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01760.1\|3405153_3406248_-	CoA transferase	NA	NA	NA	NA
AUL01761.1\|3406240_3407575_-	CoA ligase	NA	NA	NA	NA
AUL01762.1\|3407528_3408212_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUL01763.1\|3408237_3409401_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUL01764.1\|3409397_3410399_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUL01765.1\|3410398_3411271_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUL01766.1\|3411267_3412017_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-09	27.8
AUL01767.1\|3412013_3412805_-	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	1.7e-08	29.4
AUL01768.1\|3412801_3413941_-	ABC transporter	NA	NA	NA	NA
AUL01769.1\|3414216_3415002_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AUL01770.1\|3415035_3415818_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUL01771.1\|3415821_3416211_+	DNA-binding protein	NA	NA	NA	NA
AUL01772.1\|3417350_3418214_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA
AUL01773.1\|3418249_3419338_+	hypothetical protein	NA	NA	NA	NA
AUL01774.1\|3420637_3423616_+	hypothetical protein	NA	NA	NA	NA
AUL01775.1\|3424542_3425421_+	fatty acid desaturase	NA	NA	NA	NA
AUL01776.1\|3425456_3425789_+	hypothetical protein	NA	NA	NA	NA
AUL01777.1\|3425767_3427288_+	hypothetical protein	NA	NA	NA	NA
AUL01778.1\|3427369_3428320_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01779.1\|3428316_3428784_-	ribonuclease HI	J9Q745	Salmonella_phage	5.6e-36	50.7
AUL01780.1\|3428826_3429597_-	SAM-dependent methyltransferase	NA	NA	NA	NA
AUL01781.1\|3429617_3430418_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AUL01782.1\|3430428_3431838_+	lytic transglycosylase	NA	NA	NA	NA
AUL01783.1\|3431932_3432718_+	enoyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA
AUL01784.1\|3432957_3433974_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL01785.1\|3434081_3434474_-	osmotically inducible protein OsmC	NA	NA	NA	NA
AUL01786.1\|3434611_3435292_+	hypothetical protein	NA	NA	NA	NA
AUL02571.1\|3435296_3436268_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL01787.1\|3436363_3437266_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01788.1\|3438818_3439520_+	two-component system response regulator OmpR	W8CYM9	Bacillus_phage	5.6e-32	36.6
AUL01789.1\|3439519_3440944_+	ATPase	NA	NA	NA	NA
AUL01790.1\|3440960_3442016_-	cytochrome oxidase	NA	NA	NA	NA
AUL01791.1\|3442012_3443353_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AUL01792.1\|3443468_3445232_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	5.0e-162	50.0
AUL01793.1\|3445343_3446222_+	septum site-determining protein MinC	NA	NA	NA	NA
AUL01794.1\|3446334_3447150_+	septum site-determining protein MinD	NA	NA	NA	NA
AUL01795.1\|3447153_3447405_+	cell division topological specificity factor MinE	NA	NA	NA	NA
AUL01796.1\|3447489_3448506_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL01797.1\|3448836_3449058_-	hypothetical protein	NA	NA	NA	NA
AUL02572.1\|3451418_3452285_-	EamA family transporter	NA	NA	NA	NA
AUL01798.1\|3452833_3454042_-	ABC transporter permease	NA	NA	NA	NA
AUL01799.1\|3454121_3455693_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL01800.1\|3455810_3456746_-	glycosyl transferase	NA	NA	NA	NA
AUL01801.1\|3456934_3457879_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	8.4e-07	23.2
AUL01802.1\|3457947_3458118_-	hypothetical protein	NA	NA	NA	NA
AUL01803.1\|3458446_3464164_+	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	1.0e-195	39.5
AUL01804.1\|3464169_3465297_+	aminodeoxychorismate synthase, component I	S4VT78	Pandoravirus	3.8e-38	37.8
AUL01805.1\|3465352_3465979_+	aminotransferase	NA	NA	NA	NA
AUL01806.1\|3466250_3467267_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_24

3471681 : 3590575

106

Acinetobacter_phage(23.53%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL01810.1\|3471681_3472554_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
AUL01811.1\|3472903_3474043_+	MFS transporter	NA	NA	NA	NA
AUL01812.1\|3474039_3474699_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
AUL01813.1\|3474770_3475403_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AUL01814.1\|3475432_3475951_+	flavin reductase	NA	NA	NA	NA
AUL01815.1\|3475961_3477071_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AUL01816.1\|3477117_3477972_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AUL01817.1\|3477973_3478876_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL01818.1\|3480098_3481049_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01819.1\|3481145_3482279_-	hypothetical protein	NA	NA	NA	NA
AUL01820.1\|3482315_3482564_-	hypothetical protein	NA	NA	NA	NA
AUL01821.1\|3482803_3483793_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01822.1\|3483968_3484757_-	indole-3-glycerol-phosphate synthase	A0A0P0IR83	Acinetobacter_phage	5.1e-66	53.0
AUL01823.1\|3484753_3485785_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	7.4e-73	42.7
AUL01824.1\|3485803_3486367_-	anthranilate/aminodeoxychorismate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.1e-65	62.1
AUL01825.1\|3486422_3487943_-	anthranilate synthase component I	S4VT78	Pandoravirus	9.0e-43	32.1
AUL01826.1\|3488206_3488911_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AUL01827.1\|3488918_3489647_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
AUL01828.1\|3489761_3490136_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
AUL01829.1\|3490178_3491468_+	hypothetical protein	NA	NA	NA	NA
AUL01830.1\|3491464_3492634_+	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA
AUL01831.1\|3492660_3493470_+	disulfide bond formation protein DsbC	NA	NA	NA	NA
AUL01832.1\|3493529_3494465_+	hydroxyacid dehydrogenase	A0A1J0F959	Only_Syngen_Nebraska_virus	6.4e-15	27.7
AUL01833.1\|3494477_3495428_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01834.1\|3495526_3496489_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	4.6e-93	64.5
AUL01835.1\|3496520_3496880_-	dihydroneopterin aldolase	NA	NA	NA	NA
AUL01836.1\|3497004_3497907_+	oxidoreductase	G3MA85	Bacillus_virus	1.9e-08	24.0
AUL02574.1\|3497908_3499675_-	peptidase M61	NA	NA	NA	NA
AUL01837.1\|3499715_3500492_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUL01838.1\|3501815_3502718_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01839.1\|3502932_3503346_+	hypothetical protein	NA	NA	NA	NA
AUL02575.1\|3503617_3503938_+	ABC transporter permease	NA	NA	NA	NA
AUL01840.1\|3504010_3504892_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
AUL01841.1\|3505008_3505251_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
AUL01842.1\|3505388_3505859_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
AUL01843.1\|3505871_3506411_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
AUL01844.1\|3506445_3507987_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
AUL01845.1\|3508085_3508991_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
AUL01846.1\|3509033_3510434_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
AUL01847.1\|3510443_3510866_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
AUL02576.1\|3511048_3511933_+	hypothetical protein	NA	NA	NA	NA
AUL01848.1\|3512008_3513085_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA
AUL01849.1\|3513391_3515494_+	primosomal protein N'	NA	NA	NA	NA
AUL01850.1\|3515536_3517606_+	ATP-dependent DNA helicase Rep	A7KV33	Bacillus_phage	2.6e-101	37.3
AUL01851.1\|3517704_3518655_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01852.1\|3518783_3519917_-	peptidase	NA	NA	NA	NA
AUL01853.1\|3519960_3520866_-	alpha/beta hydrolase	NA	NA	NA	NA
AUL01854.1\|3522565_3523486_-	peptide ABC transporter permease	NA	NA	NA	NA
AUL01855.1\|3523493_3524471_-	ABC transporter permease	NA	NA	NA	NA
AUL01856.1\|3524529_3525489_-	succinylglutamate desuccinylase	NA	NA	NA	NA
AUL01857.1\|3527538_3527775_-	hypothetical protein	NA	NA	NA	NA
AUL01858.1\|3527901_3528765_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
AUL01859.1\|3528853_3529675_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUL01860.1\|3529754_3530492_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUL01861.1\|3530488_3531481_-	2-nitropropane dioxygenase	NA	NA	NA	NA
AUL02577.1\|3531633_3532257_+	TetR family transcriptional regulator	NA	NA	NA	NA
AUL01862.1\|3532301_3533450_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUL01863.1\|3535821_3536724_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01864.1\|3537493_3537913_-	hypothetical protein	NA	NA	NA	NA
AUL02578.1\|3538122_3539064_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01865.1\|3539210_3540113_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01866.1\|3540409_3540907_+	hypothetical protein	NA	NA	NA	NA
AUL01867.1\|3540949_3542725_+	hypothetical protein	NA	NA	NA	NA
AUL01868.1\|3542732_3543599_+	copper resistance protein	NA	NA	NA	NA
AUL01869.1\|3543605_3544331_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUL01870.1\|3544500_3544731_+	hypothetical protein	NA	NA	NA	NA
AUL01871.1\|3544795_3544990_+	hypothetical protein	NA	NA	NA	NA
AUL01872.1\|3545509_3546280_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUL01873.1\|3546593_3547184_+	cysteine dioxygenase	NA	NA	NA	NA
AUL01874.1\|3547217_3548546_-	amidase	NA	NA	NA	NA
AUL01875.1\|3548620_3549766_-	transporter	NA	NA	NA	NA
AUL01876.1\|3549877_3550876_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01877.1\|3550838_3551273_+	carbon monoxide dehydrogenase	NA	NA	NA	NA
AUL01878.1\|3552789_3553674_+	EamA family transporter	NA	NA	NA	NA
AUL01879.1\|3553670_3554876_-	cardiolipin synthase B	NA	NA	NA	NA
AUL01880.1\|3554872_3555733_-	endonuclease	NA	NA	NA	NA
AUL01881.1\|3555845_3557636_-\|tRNA	aspartate--tRNA ligase	A0A1V0SAC0	Catovirus	6.5e-08	25.5
AUL02579.1\|3557676_3558321_-	hypothetical protein	A0A2I7S9X1	Vibrio_phage	8.5e-11	28.4
AUL01882.1\|3558342_3558651_-	FmdB family transcriptional regulator	NA	NA	NA	NA
AUL02580.1\|3558816_3560103_-	hypothetical protein	NA	NA	NA	NA
AUL01883.1\|3564438_3565653_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
AUL01884.1\|3565758_3566748_+	D-arabinose 5-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	4.3e-38	37.7
AUL01885.1\|3566744_3567353_+	phenylphosphate carboxylase subunit delta	E3T535	Cafeteria_roenbergensis_virus	5.2e-10	26.1
AUL01886.1\|3567365_3567995_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
AUL01887.1\|3567991_3568612_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
AUL01888.1\|3568643_3569435_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.5e-20	27.4
AUL01889.1\|3569788_3570010_+	ribosomal subunit interface protein	NA	NA	NA	NA
AUL01890.1\|3570286_3570742_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
AUL01891.1\|3570760_3571687_+	HPr kinase/phosphorylase	NA	NA	NA	NA
AUL01892.1\|3571740_3573027_-	alcohol dehydrogenase	NA	NA	NA	NA
AUL01893.1\|3573957_3574830_+	RNase adaptor protein RapZ	A0A1P8D5W0	Corynebacterium_phage	2.4e-08	34.5
AUL01894.1\|3574826_3575777_+	hypothetical protein	F5B3X9	Synechococcus_phage	6.9e-17	47.2
AUL01895.1\|3575923_3576826_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01896.1\|3576930_3577161_-	hypothetical protein	NA	NA	NA	NA
AUL01897.1\|3577287_3577677_-	hypothetical protein	NA	NA	NA	NA
AUL01898.1\|3577693_3580075_-	dehydrogenase	NA	NA	NA	NA
AUL01899.1\|3580067_3580577_-	4-hydroxybenzoyl-CoA reductase subunit gamma	A0A0P0IVM8	Acinetobacter_phage	8.8e-19	37.3
AUL01900.1\|3581459_3582455_-	4,5-dihydroxyphthalate decarboxylase	NA	NA	NA	NA
AUL01901.1\|3582473_3583466_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL01902.1\|3583706_3584267_-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA	NA	NA	NA
AUL01903.1\|3584271_3584598_-	monothiol glutaredoxin, Grx4 family	NA	NA	NA	NA
AUL01904.1\|3584634_3585447_-	protein-(glutamine-N5) methyltransferase, release factor-specific	NA	NA	NA	NA
AUL01905.1\|3585457_3586540_-	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	3.3e-07	40.7
AUL01906.1\|3586626_3587901_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
AUL01907.1\|3588623_3589574_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL01908.1\|3589672_3590575_-\|transposase	IS481 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP018039

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection