CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP015566	Pasteurella multocida strain USDA-ARS-USMARC-60712 chromosome, complete genome	0 crisprs	cas3,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DEDDh,DinG,csa3	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1619508 : 1628866

Sinorhizobium_phage(16.67%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK42996.1\|1619508_1620783_+\|tRNA	multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	A0A0F6YPT7	Sinorhizobium_phage	1.8e-92	49.5
AUK42997.1\|1620823_1621441_+	lipoprotein localization factor LolB	NA	NA	NA	NA
AUK42998.1\|1621440_1622328_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
AUK42999.1\|1622397_1623345_+	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	1.9e-43	38.7
AUK43000.1\|1623420_1624974_-	peptidase M23	A0A2K9VGT1	Pontimonas_phage	8.4e-20	49.6
AUK43001.1\|1625208_1626000_+	zinc ABC transporter ATP-binding protein ZnuC	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-17	29.7
AUK43002.1\|1626008_1626794_+	high-affinity zinc transporter membrane component	NA	NA	NA	NA
AUK43003.1\|1626870_1627851_-	dipeptide ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-15	26.4
AUK43004.1\|1627867_1628866_-	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.3e-15	29.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage