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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP017923 Bordetella pertussis strain J148 chromosome, complete genome 5 crisprs csa3,DEDDh,cas3,DinG 0 0 29 0

Results visualization

1. CP017923
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP017923_1 664127-664236 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP017923_2 1874160-1874287 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP017923_3 2941805-2941921 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP017923_4 3657633-3657726 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP017923_5 3839085-3839169 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 61595 55 Natrialba_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_2 255277 : 326265 55 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_3 614410 : 672870 49 Pandoravirus(14.29%) tRNA,transposase NA
DBSCAN-SWA_4 714731 : 792040 59 Bacillus_phage(20.0%) tRNA,transposase,integrase,protease attL 761868:761886|attR 781756:781774
DBSCAN-SWA_5 911307 : 975141 57 Pseudomonas_phage(30.0%) tRNA,transposase,protease NA
DBSCAN-SWA_6 1048427 : 1106091 53 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_7 1110621 : 1172752 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_8 1176304 : 1242770 51 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_9 1258965 : 1315672 43 Agrobacterium_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_10 1344087 : 1401249 53 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_11 1673678 : 1737208 50 Klebsiella_phage(11.11%) protease,transposase NA
DBSCAN-SWA_12 1776369 : 1824384 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_13 1885946 : 1957455 59 Klosneuvirus(22.22%) tRNA,transposase NA
DBSCAN-SWA_14 1968707 : 2017118 47 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_15 2029551 : 2093872 54 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_16 2321686 : 2384227 57 Pandoravirus(20.0%) tRNA,transposase NA
DBSCAN-SWA_17 2423552 : 2476570 50 Ectocarpus_siliculosus_virus(12.5%) transposase NA
DBSCAN-SWA_18 2489930 : 2542251 55 Planktothrix_phage(15.38%) protease,transposase,tRNA NA
DBSCAN-SWA_19 2575111 : 2613701 35 Planktothrix_phage(14.29%) protease,transposase NA
DBSCAN-SWA_20 2641920 : 2708372 58 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2930220 : 3065373 109 uncultured_Mediterranean_phage(15.79%) tRNA,transposase NA
DBSCAN-SWA_22 3089177 : 3227921 121 Bacillus_virus(11.76%) transposase,holin NA
DBSCAN-SWA_23 3268453 : 3341567 59 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_24 3352854 : 3452967 108 uncultured_Caudovirales_phage(14.29%) tRNA,transposase,tail,terminase NA
DBSCAN-SWA_25 3613637 : 3668611 46 Lake_Baikal_phage(20.0%) transposase NA
DBSCAN-SWA_26 3758424 : 3812619 53 Paramecium_bursaria_Chlorella_virus(14.29%) protease,transposase NA
DBSCAN-SWA_27 3823235 : 3884076 52 uncultured_Caudovirales_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_28 3953652 : 4012126 57 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_29 4019316 : 4078130 51 Planktothrix_phage(50.0%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage