CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP018038	Bordetella pertussis strain J207 chromosome, complete genome	4 crisprs	DEDDh,csa3,cas3,DinG	0	0	24	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP018038_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018038_1

681092-681201

Orphan

Consensus_repeat	Method
GGGGACAGATACCGTCTTGGCCGTCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP018038_1

>merge|CP018038|1|681092-681201|CRISPRCasFinder
GGGGACAGATACCGTCTTGGCCGTCAAGCGTCGATGGCGTACAGCAGTGTGCCTGTCCCGGCGGGGACAGGCACCCTCCCTGCGGGGACAGATACCGTCTTGGCAGTCAA

>CP018038|1|1|681092-681201|CRISPRCasFinder
GGGGACAGATACCGTCTTGGCCGTCAA	GCGTCGATGGCGTACAGCAGTGTGCCTGTCCCGGCGGGGACAGGCACCCTCCCTGC
GGGGACAGATACCGTCTTGGCAGTCAA

Protein	Signature genes	Signature genes Name	Protein_function
CP018038.1\|AUK95988.1\|668950_669829_-\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|178806
CP018038.1\|AUK95999.1\|685574_686345_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
CP018038.1\|AUK98775.1\|678903_679875_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP018038.1\|AUK95987.1\|668022_668838_-\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|225447
CP018038.1\|AUK96000.1\|686387_686855_+\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
CP018038.1\|AUK95997.1\|683333_684743_-\|lytic-transglycosylase	unknown	unknown	gnl\|CDD\|182727
CP018038.1\|AUK96001.1\|686851_687802_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018038.1\|AUK95995.1\|680697_681090_+\|osmotically-inducible-protein-OsmC	unknown	unknown	gnl\|CDD\|224679
CP018038.1\|AUK95996.1\|682453_683239_-\|enoyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|180789
CP018038.1\|AUK96005.1\|691554_694533_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375438
CP018038.1\|AUK96002.1\|687882_689403_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235866
CP018038.1\|AUK95990.1\|671819_673160_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
CP018038.1\|AUK96003.1\|689381_689714_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235866
CP018038.1\|AUK95994.1\|679879_680560_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377342
CP018038.1\|AUK95991.1\|673156_674212_+\|cytochrome-oxidase	unknown	unknown	gnl\|CDD\|376764
CP018038.1\|AUK95993.1\|675652_676354_-\|two-component-system-response-regulator-OmpR	unknown	unknown	gnl\|CDD\|181883
CP018038.1\|AUK95998.1\|684753_685554_-\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
CP018038.1\|AUK95992.1\|674228_675653_-\|ATPase	unknown	unknown	gnl\|CDD\|236531
CP018038.1\|AUK95989.1\|669940_671704_-\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP018038.1\|AUK96004.1\|689749_690628_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126

Protein	Function_ID	Function_description	E-value
CP018038.1\|AUK95988.1\|668950_669829_-\|septum-site-determining-protein-MinC	gnl\|CDD\|178806	PRK00030, minC, septum site-determining protein MinC.	3.47756e-166
CP018038.1\|AUK95999.1\|685574_686345_+\|SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.0439e-10
CP018038.1\|AUK98775.1\|678903_679875_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	2.71001e-129
CP018038.1\|AUK95987.1\|668022_668838_-\|septum-site-determining-protein-MinD	gnl\|CDD\|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	7.6448e-163
CP018038.1\|AUK96000.1\|686387_686855_+\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.07937e-102
CP018038.1\|AUK95997.1\|683333_684743_-\|lytic-transglycosylase	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	5.28635e-76
CP018038.1\|AUK96001.1\|686851_687802_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23
CP018038.1\|AUK95995.1\|680697_681090_+\|osmotically-inducible-protein-OsmC	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	4.86152e-16
CP018038.1\|AUK95996.1\|682453_683239_-\|enoyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|180789	PRK06997, PRK06997, enoyl-[acyl-carrier-protein] reductase FabI.	1.22848e-177
CP018038.1\|AUK96005.1\|691554_694533_-\|hypothetical-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.32844e-07
CP018038.1\|AUK96002.1\|687882_689403_-\|hypothetical-protein	gnl\|CDD\|235866	PRK06816, PRK06816, StlD/DarB family beta-ketosynthase.	1.80369e-130
CP018038.1\|AUK95990.1\|671819_673160_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.21087e-123
CP018038.1\|AUK96003.1\|689381_689714_-\|hypothetical-protein	gnl\|CDD\|235866	PRK06816, PRK06816, StlD/DarB family beta-ketosynthase.	8.20524e-38
CP018038.1\|AUK95994.1\|679879_680560_-\|hypothetical-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	5.6465e-62
CP018038.1\|AUK95991.1\|673156_674212_+\|cytochrome-oxidase	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	1.57809e-49
CP018038.1\|AUK95993.1\|675652_676354_-\|two-component-system-response-regulator-OmpR	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.05363e-90
CP018038.1\|AUK95998.1\|684753_685554_-\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	2.85848e-146
CP018038.1\|AUK95992.1\|674228_675653_-\|ATPase	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.78414e-42
CP018038.1\|AUK95989.1\|669940_671704_-\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP018038.1\|AUK96004.1\|689749_690628_-\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	2.20669e-12

>CP018038.1|AUK95995.1|680697_681090_+|osmotically-inducible-protein-OsmC
MTIQVRANTPGGLQYTATAEGHELPLAMPQPQGEGPDPHDYFDTALGGCKALTLMVYAQRKGLPLQAVDVDVVRDASEERKGIYRLTAKLKLHGDLDDAQIDELLKVADKCPLHKLMTATDIQVSTIVVE
>CP018038.1|AUK95994.1|679879_680560_-|hypothetical-protein
MSARQLLDQLLQSGQSLMQGAGAQAQQATQGGKGTFLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMAALGALAYRAYDQYQRNQAGGAAAPAPQTLDRLPPAPAEQHSNAVLVAMIGAAKADGHIGPDERQLLETELAKLSGDAGDRAWLEAELARPLDPAVIAQQARTPEMGAEMYLASLLVADEQSFMERAYLDELARQLKLPAELKQQLEAQVPAAA
>CP018038.1|AUK98775.1|678903_679875_+|ABC-transporter-substrate-binding-protein
MKSQVSILLAGCLLGAGAAAAQAPATYPDHAITIVVTFPPGGGTDLLARKLGAAMQQRLGQPVVVENRPGASGNIGARAVAEARPDGYTLLMVNSSFAVNPGVFRNLDFSPTRDFTAVINVAYVPSVIVTAEPAGDAGLPERLRQADTQSRTLAFASCGNGTPQHLAGEMLRQASGAWLQHVPYRGCGPALTDVLSRQVPLGIVTASSAAPFIHAGKLRALAVTSAQRSPLLPDVPTVAEQGAPGYELDQWHGLLAPAGTPPAVIQRLYEALSAIVAEPAMRRELESLGFNPVSEGPERFEALVQADIARFAALTARMGLRAD
>CP018038.1|AUK95993.1|675652_676354_-|two-component-system-response-regulator-OmpR
MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARITRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGEINLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQTVWGIGYRFSP
>CP018038.1|AUK95992.1|674228_675653_-|ATPase
MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMEDVAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQEDEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAPSPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLADAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMAVLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSGGLLVRITLPLAKA
>CP018038.1|AUK95991.1|673156_674212_+|cytochrome-oxidase
MIATLAASLGLSPDDPSFWMPLVFVGLLLLLMAAGIVLDGFDIGVGLLLQLAPSEERGRMMGLLSPWRDANEFWPLLGLGLFVSAFPFAWGGVLGKLFGPLTVMALGMVLRSVSFEFRIRARTEIKPRWIFGFWVGSLLTALGQGMVLGRIATDYQADSGYGWFAFFVGLCVMAAYALLGACWLVMRVDGELQRRAAGWARHSIRWTAAGMVAIAVTLGLANAGIFYKWSNTAHLGVAAMVWALMLLGFVAAEMLLARLPGKADGFSWLPFVLCVMLFVLMLCGLAYSFFPYLILDDMTIWDGSGALDSMRLVLAGTVIGVPVVLVFNILAYRSVFGKERRPVPLLPPPGA
>CP018038.1|AUK95990.1|671819_673160_+|cytochrome-ubiquinol-oxidase-subunit-I
MNIPPLLLARAQFTASLGFLALFLAISLALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMDKIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVLALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAEPELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLRLALGLGLLMLAASCATLALTCRRGFDPVALPRWWLRVLSLLMFAGALGVVATWCYDLAGMQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRKTGGSS
>CP018038.1|AUK95989.1|669940_671704_-|glutamine--tRNA-ligase
MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQGQPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVDAIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRGTLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPDGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNRIVTLRDSWQAA
>CP018038.1|AUK95988.1|668950_669829_-|septum-site-determining-protein-MinC
MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFFENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEGANLQGARDAGLVPVELSTSVARAPQVIDTAPPNDVATPVPSVPEATAEATAKAGPQDDEADGEQADEAPAHNPESVPTRAARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNVHVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLDGDTLRIEALKG
>CP018038.1|AUK95987.1|668022_668838_-|septum-site-determining-protein-MinD
MTRIVVVTSGKGGVGKTTTSASFSAGLAMRGHKTAVIDFDVGLRNLDLIMGCERRVVYDFVNVIQGEASLKQALIKDKQLENLFILPASQTRDKDALTQEGVEKVIDELKEMGFDYIVCDSPAGIEAGALMAAYFADDALVVTNPEVSSVRDSDRILGILAAKSRRAVQGDEPVKEYLLLTRYNPKRVNDGEMLSLSDIEDILRIKLIGVIPESEAVLQASNQGLPAIHLKDTDVSEAYKDVVARFLGEERSLRFTDYEKPGLLKRLFGGK
>CP018038.1|AUK95996.1|682453_683239_-|enoyl-[acyl-carrier-protein]-reductase
MGFLAGKRILMTGVLSNRSIAYGIARACRDQGADLAFTYVGDRFKERITEFAASFGSDIVLPCDVAEDSQIDAAFAELGKRWDGLDGLVHAIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPAMAKAALPLMEGRKGSVLTLSYLGSERVVANYNTMGLAKASLEASVRYLATALGPRGIRANAISAGPIKTLAASGIKDFSSILKFVEANAPLRRNVTIEDVGNVAAFMLSDLAAGITGEITHVDAGFSTVVPGMEN
>CP018038.1|AUK95997.1|683333_684743_-|lytic-transglycosylase
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRGFAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVESAYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKFAVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLLPADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVAADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
>CP018038.1|AUK95998.1|684753_685554_-|hydroxyacylglutathione-hydrolase
MQTAPPLSAVVPLPAFSDNYIWALAHEGQAAVVDPGDAAPVLRWLRATGATLRAILLTHHHPDHVGGVLELVQATGATVYGPAGETLPHCDVRLAEGDRVTLPELALALEVLDVPGHTAGHIAYTGRAAGVERVLFCGDTLFAGGCGRLFEGTPAQMLDSLEKLSALPADTQVCCAHEYTLANLRWALAVEPANRTLQQWYQRAQELRNEGTPTLPSTIGQERETNPFLRTPHAAVAHAAAVWSGRSLATPVEVFAALRQWKNNFK
>CP018038.1|AUK95999.1|685574_686345_+|SAM-dependent-methyltransferase
MAEETPPIVELAEWFQTPPGQYVLAWEQAQFDEAVADIFGYYAWQVGLAEPNLLRANRMPFKAWVGAGVPPPELAQGWQACVAAAPEALPFESQSVDLLVLPHAFECAEAPHLVLREVERVLVPEGRVVISGFNPWSLWGARNLMPGMEAWLPLPLSAQVALPRLKDWFKLLSFEVERGRFGCYAPACRTDKWLRRWRFMERYGQRWWGLGGAVYVVTATKKVAAMRLIGPAWKTRRKRAQAASVVVNRQADDPGR
>CP018038.1|AUK96000.1|686387_686855_+|ribonuclease-HI
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR
>CP018038.1|AUK96001.1|686851_687802_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP018038.1|AUK96002.1|687882_689403_-|hypothetical-protein
MPGFANMIQGELSAAPLETLSVHGICAAGVGAIQAAAQGIELGAHRRALAVASELPSRLFKRSRFAAPGYDAHFLRWMLSDGAGAMLLGDASQPLAGAANGVRLRLKWIHQRSFSGDYPVCMQLGQSAGGQAHLDYGSWSEAEAAGALLLRQDILLLPHLFDIGIHEYAKLVHDGWVDPRQVSHFLCHYSSEKFIPVVEDLMDKAGLAIARERWFSNLAWRGNTGAASILIMLAEFLQTRTVQPGEQIFCYIPESGRFMAAYMLLQAEGPDETAQPARARAVPAAAPAGEADFIAPPHDPAHAPQGLEPLLGELAAIITKGSIFFRAWTLSVRLPAREALRIAWTRGAGAGWTHGPRHLAGSWELRRGALGKGAMPDHNTAQRRTPNAASRRQIHVRHRRRYRHGVRLHHRGRRLGRLRAGQSPVGRSIRACAVAGSRRRRFLALDPHPGRLPVLHRQPAHRLVLSHPGRSGSERAQPGLSARPRAGRQLPHQRHNLHARLAVKIQ
>CP018038.1|AUK96003.1|689381_689714_-|hypothetical-protein
MPVAFDRVYLHSAGYFMPGEPVDNDAMDQYIAPLNRISGRIKNRILAENGIRQRYYAIDPEGRTRWSNAQLAAQAIQACLARGATSTCHRSRCWPAARRAAIRSCPGSPT
>CP018038.1|AUK96004.1|689749_690628_-|fatty-acid-desaturase
MVRPAEWLRHRRDWQSVLYLAALPALAAWQWVHGWHWALYAPMLFLTLGVGVIHHNHAHRRMWRPRWLNRLTDFWLTLLQGHPTFVFHAAHNANHHRYKHGPRDVARTYRFGGDTNHLAGYLLHPLQAVVVLYPLFLASLRRLRSRRPGVWRYCLRQYAAWLGLWGGLLALDPGKAFWLVIVPQLHGLHWLLATNYLQHAHADGGPGRHAALSYARNFEGWVNPLLFNIGLHTAHHENPRAHWSELRALHWQHYRDRVPSRLNERGLAPYMARVFVLGLFSRRCRTHTLMRP
>CP018038.1|AUK96005.1|691554_694533_-|hypothetical-protein
MQLWLPDGTATSVRANAAGGFEASSAGDMTSGLIRARATDRYGDTSQEVTYAYTDTVDKTAPVLSIAGVATDEATGRVTVTGRSEPDAQVTIRFPGGGRKTVRADANGAYRVRSDGDLPAGVIVVQAADAAGNSTQAQQAYQDTVDRTAPEPVQIALDTDAATGRLTVSGQAEPGGSVTVTWPDGTTQTVRVDADGGFRVTSAGDAAQGDVVVVVADQAGNRAAPVRAHYADPVDRTAPMTPTVRHATDAQTGRVTVMGRTEAGALVTVQFPDGSSKTVRAQNDGGYAATSDTDMVSGPIVVSAGDADGNRTPAQQVMYTDTLDKTAPASPSLTVREDAASGRATVTGQAEPGAAVRVVFPNGEAQTVTAGSDGAYSVTSTADMVAGEITVVAADASGNQSAPARTVFADAVDKTAPAAPTLALSEAADSGRLTVSGRTEPGASVRVTFPDGETVTVTAKADGTYTATSRADMIGGNVTVVATDTAGNAAAPVRAAYADTVDRTPPVLDTPVLNVASDSGRVTVTGVTEPGARVQVAIPGESLQTVTADSAGRYRAVSPGDVLQSGTVRVIATDAHGNASAPRDVPYQDAVDRTAPPLTIEAAVEQARTGVVNVSGKTEPNLMVSATFPDGQTAQARADGQGRYQLASPADVARSGRIAVSASDAAGNRAAARAEFTDQVDKTAPAVTIRAVTEQAGTGVATVSGATEPGATVSVTFPDGQVARATADRSGAYTVHSARDVTARGNISVIATDAAGNASPSVSRQFSNTVADTVPPSLTIAMVTTDPGNGRITVSGVTEAGARVHVVFPGGASDTVTADSKGGYRATSAGDVGSGAVTAQATDASANRSPLKTYAYTDAWQPRQLSAKDFSQSRYFVPLTTRGGTDNEPLLRITTNQQIPTAELRVALKPYKTEDRAGRLVREAITLKWGNAPGVGGDARALHFYVPDSAKAKLRKELTEVERSNDYKFWIEFTDTRFGGVARLYIKVISTL

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Crispr_ID: CP018038_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018038_2

2967729-2967845

Orphan

Consensus_repeat	Method
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP018038_2

>merge|CP018038|2|2967729-2967845|CRISPRCasFinder
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAAGGCCCCCACGCTGCGCCCGCTGTGCGGGCTTGCTGCCCCCCAAGGGGGTTTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA

>CP018038|2|2|2967729-2967845|CRISPRCasFinder
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA	GGCCCCCACGCTGCGCCCGCTGTGCGGGCTTGCTGCCCCCCAAGGGGGT
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP018038.1\|AUK97801.1\|2980528_2980831_+\|hypothetical-protein	unknown	unknown	unknown
CP018038.1\|AUK97799.1\|2978203_2978959_+\|short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|180796
CP018038.1\|AUK97796.1\|2972329_2973025_-\|lipoprotein-releasing-system,-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
CP018038.1\|AUK98930.1\|2973017_2974250_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|274034
CP018038.1\|AUK97793.1\|2967511_2967688_-\|hypothetical-protein	unknown	unknown	unknown
CP018038.1\|AUK98931.1\|2975266_2976967_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|182944
CP018038.1\|AUK97794.1\|2967956_2971187_-\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|377133
CP018038.1\|AUK97785.1\|2950068_2952765_+\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|237267
CP018038.1\|AUK97792.1\|2963294_2967188_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378762
CP018038.1\|AUK97798.1\|2977241_2978174_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
CP018038.1\|AUK97800.1\|2978965_2980486_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
CP018038.1\|AUK97797.1\|2974343_2975285_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226706
CP018038.1\|AUK97784.1\|2949454_2949943_-\|ArsR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
CP018038.1\|AUK97791.1\|2958630_2959599_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP018038.1\|AUK97786.1\|2952919_2955202_+\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|235976
CP018038.1\|AUK97787.1\|2955374_2955998_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|339870
CP018038.1\|AUK97789.1\|2957093_2957648_-\|transcription-elongation-factor-GreB	unknown	unknown	gnl\|CDD\|179345
CP018038.1\|AUK97788.1\|2956144_2957047_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018038.1\|AUK97790.1\|2957715_2958561_-\|phosphatase	unknown	unknown	gnl\|CDD\|223686
CP018038.1\|AUK97795.1\|2971468_2972296_-\|DNAase	unknown	unknown	gnl\|CDD\|238635

Protein	Function_ID	Function_description	E-value
CP018038.1\|AUK97799.1\|2978203_2978959_+\|short-chain-dehydrogenase	gnl\|CDD\|180796	PRK07023, PRK07023, SDR family oxidoreductase.	5.47641e-103
CP018038.1\|AUK97796.1\|2972329_2973025_-\|lipoprotein-releasing-system,-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.7791e-114
CP018038.1\|AUK98930.1\|2973017_2974250_-\|ABC-transporter-permease	gnl\|CDD\|274034	TIGR02212, releasing_system_transmembrane_protein_lolC., lipoprotein releasing system, transmembrane protein, LolC/E family. This model describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC. [Protein fate, Protein and peptide secretion and trafficking].	2.30712e-155
CP018038.1\|AUK97797.1\|2974343_2975285_+\|hypothetical-protein	gnl\|CDD\|226706	COG4255, COG4255, Uncharacterized protein conserved in bacteria [Function unknown].	1.55834e-20
CP018038.1\|AUK98931.1\|2975266_2976967_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|182944	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ.	0
CP018038.1\|AUK97794.1\|2967956_2971187_-\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	gnl\|CDD\|377133	pfam03797, Autotransporter, Autotransporter beta-domain. Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.	3.21051e-45
CP018038.1\|AUK97785.1\|2950068_2952765_+\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|237267	PRK13012, PRK13012, 2-oxoacid dehydrogenase subunit E1; Provisional.	0
CP018038.1\|AUK97792.1\|2963294_2967188_-\|hypothetical-protein	gnl\|CDD\|378762	pfam11924, IAT_beta, Inverse autotransporter, beta-domain. This is a family of beta-barrel porin-like outer membrane proteins from enteropathogenic Gram-negative bacteria. Intimins and invasins are virulence factors produced by pathogenic Gram-negative bacteria. They carry C-terminal extracellular passenger domains that are involved in adhesion to host cells and N-terminal beta domains that are embedded in the outer membrane. This family represents the beta-barrel porin-like domain in the outer membrane that can be found in intimins, invasins and some inverse autotransporters.	7.28067e-85
CP018038.1\|AUK97798.1\|2977241_2978174_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
CP018038.1\|AUK97800.1\|2978965_2980486_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
CP018038.1\|AUK97784.1\|2949454_2949943_-\|ArsR-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.95114e-53
CP018038.1\|AUK97791.1\|2958630_2959599_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.0858e-13
CP018038.1\|AUK97786.1\|2952919_2955202_+\|NADP-dependent-malic-enzyme	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
CP018038.1\|AUK97787.1\|2955374_2955998_+\|fimbrial-protein	gnl\|CDD\|339870	pfam16970, FimA, Type-1 fimbrial protein, A. FimA is a family of Gram-negative fimbrial component A proteins that form part of the pili. There are usually up to 1000 copies of this subunit in one pilus that form a helically wound rod onto which the tip fibrillum (FimF.FimG, FimH) is attached. Pilus subunits are translocated from the cytoplasm to the periplasm via the general secretory pathway SecYEG.	7.5249e-22
CP018038.1\|AUK97789.1\|2957093_2957648_-\|transcription-elongation-factor-GreB	gnl\|CDD\|179345	PRK01885, greB, transcription elongation factor GreB; Reviewed.	4.04513e-99
CP018038.1\|AUK97788.1\|2956144_2957047_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	4.61646e-23
CP018038.1\|AUK97790.1\|2957715_2958561_-\|phosphatase	gnl\|CDD\|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	1.79612e-72
CP018038.1\|AUK97795.1\|2971468_2972296_-\|DNAase	gnl\|CDD\|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	1.42767e-89

>CP018038.1|AUK97793.1|2967511_2967688_-|hypothetical-protein
MGAFCLFEECVAGIASRHPQWADVALPGDIQAEVLPRAPLPVHGAPAARYPGLFDVPD
>CP018038.1|AUK97792.1|2963294_2967188_-|hypothetical-protein
MVRGAWVVAGEWARAGRKSSSPRRQNRQRARRGVAAMVGGSILAQALLPLSALAQGAPTLRPARVAQEEAGQDAAWTRKLAAQAESLARRQAERQPGARVDGDYLKREAQAQVNDVLRDGVNLARESGLPFLRNLQGGLSHDFESGRTSLQLNTIDEVYRAGRNTGLLQLGAHNQNDRPTANAGAVYRREVNDALMVGANGFLDYEFGKQHLRGSVGLEVIAPEFSLYGNVYAPLSDWKGAKRNNRREEKPASGMDVGVGYRPAFAPGLSLSATHFRWNGAEVDYFDNGRTQAGAKGFKVGVEYRPVSLVSVGLEQTKVIGGGRETRMQLGLNINLSEPLSKQLRRDASGTPAFSPDARRHALVERENRIVLNTRRKEIILPLVVSKVSTLQADGRVTVIGATQPFATVTVRMPDGMTGTATADASGRFAYTSAGDQPSGVLALRARNAEGDSSREVTYRYVDEVVLGDLQVAVMALVPLPADRALEVRGKTEPKVDVKVSFSNGESVLAKADAKGLFTVRSTRKVTQGKVLVQATHPQTRKEARAVADYLPPATLAPTIDAVTAQADTGRVTVTGQAEPGAQVDVHFPDGTAKTVDAGADGAYAATSDGDMVSGDIHAQATDKAGNQSPEATRHYGDTTDITPPAAPTIANVATDATSGRVTAAGMAEPGANVTVNFPDGTRKTVVAGGDGAYTATSDRDMVSGDIRVQATDKAGNQSPEATRAYADAVDRTAPEVPTVTHVATDAKSGRITVTGMAEPGANVTVNFPDGTRKTAVAGGDGAYTATSDGDMVSGDIRVQATDKAGNRSPEATRAYADTVDTTPPAVPTITDVTTDATNGRITVTGVAEPGANVTVDFPDGTRKTVVAGGDGAYTATSDRDMASGDVRVQAIDKGGNRSPEATRAYADTVDKTAPAAPTITNVTTDAASGRITVTGMAEPGANVAVNFPDGTRKTVVADGAGAYAADSDGDMVAGDIHVQATDKAGNRSPEGTRAYVDTVDKTPSAAPTIVRVTTDRSSGVVTVAGTADPDNDVTVQFPDGGRKTVKAGKDGSYSVTSDNDIFSGIIQVSARNPAGNASPEVRQDYRDEFVPANAITNIETNSRNGIVTVSGKTSPDATVVVSFPGGDEARTRAKGDGTFSVSSPMDIPRGVVSLSTEVNGVQTVVATRTYEDKFTKGGLDFTAFLPYTPKFNGVSTSDTSAVLLSIPRYFYSGGAPVAKIMPPEADGSEFAKRAAAAMRAQVTPGRDSSEYDVRVSWPAGTFTPADVGQRADLAVKVFDKGTGKYMLLLAPVNFPY
>CP018038.1|AUK97791.1|2958630_2959599_-|alpha/beta-hydrolase
MGHRRPSGPRRGDIMQEPRLDFVTCASPTGFHRMAYWEWGDPLNDRVLVCVHGLTRTGRDFDHLARRLAGQWRVVCPDVAGRGKSDWLSNPALYAVPQYVSDMATLIARVWPATLAWVGTSMGGLIGLGLAGAATMMRLARAMRPRPDGLPAQADDLRLHRLVLNDVGPRLNVEVLQRIAGNVAAQDSYSTFEAAVAAMRQISTTFGPHTDAQWDELARHIYVRQGGGWVRHFDPALAVPLGAQVAQAFEAGERILWQAYDSLDCPVLIVRGQDSDLLSAATAGEMLARNPRARLHEVPGVGHAPTLMTPEQIEPIARFLQE
>CP018038.1|AUK97790.1|2957715_2958561_-|phosphatase
MNIAAPNVDLHCHSTVSDGSMPPAAVARRAHANGVDVWALTDHDEIGGVAEAAQAAAALGMRFVAGVEISVTWAGLTVHIVGLRVDPANEALVQGLRDTRAGRAARAVQIGERLAGLGMPGAYEGALPFAGNPELISRTHFARFLVEAGYCPDVQTVFNKYLGDDCPGHVPMQWASLAEAVGWIRGAGGCAVIAHPGRYKYSPMQFDALYDEFLQLGGTGIEVVTGSHTSEEARRYAEVARRHGFLASRGSDFHSPTESRVDLGRLPPLPPDLKPVWHDWF
>CP018038.1|AUK97789.1|2957093_2957648_-|transcription-elongation-factor-GreB
MNKAFVKESDRDDEDDLPEAQALPAGTRNYMTPQGYARLRDELSHLMNVERPSVVQVVSWAASNGDRSENGDYLYGKKRLREIDRRMRFLTKRLDIAEVVDPAAQPNRDQVFFGATVLYMDRAGEERTVTIVGVDEAEPLAGKISWISPVARALTKAHEGDTVTLRTPGGVEELEILEVRYPDA
>CP018038.1|AUK97788.1|2956144_2957047_+|IS481-family-transposase
MVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLAGLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP018038.1|AUK97787.1|2955374_2955998_+|fimbrial-protein
MQIPFQRALRLCLRAALAAIASAAHADDGTIVITGTITDTTCVIEDPSGPNHTKVVQLPKISKNALKANGDQAGRTPFIIKLKDCPSSLGNGVKAYFEPGPTTDYSTGDLRAYKMVYATNPQTQLSNITAATEAQGVQVRISNLNDSKITMGANEATQQAAGFDPEVQTGGTSRTVTMRYLASYVKKNGDVEASAITTYVGFSVVYP
>CP018038.1|AUK97786.1|2952919_2955202_+|NADP-dependent-malic-enzyme
MDENLTKLALDYHAYPTPGKISVTPTKTLANQDDLSLAYSPGVAAACMAIFDQGNDAASKYTSRSNLVGVITNGTAVLGLGNIGSLAAKPVMEGKGCLFKKFAGIDVFDIELAENDPDKLVDIIAALEPTLGGVNLEDIKAPECFYIEKKLRERMNIPVFHDDQHGTAIISSAAILNGLKVVGKDIGQVKLACSGAGAAAIACLDLLVHLGIKREHIYVVDSRGVIWEGRDENMEPNKRRYAQKTEARTLADVVNGADVFLGCSTAGVLTPEMVKTMAAQPLILALANPEPEIRPELAKAARPDCIVATGRSDYPNQVNNVLCFPFIFRGALDAGATRITEEMKLACVKAIAELAQAEQNDEVARAYAGQELSFGPDYIIPKPFDPRLIVQIAPAVAQAAADSGVATRPIEDIEAYRQKLMGFVYHSGQLMRPLFQQAKQAPKRVVYADGEDERVLRAVQTVIDEKLAEPILVGRPSVIEMRIKKFGLRMVPGQNVEIVDPEDDSRFNDTWNGYYQLRGREGVTPAIAKAMIRKHNTLIGAMLLRRGDADALLCGVASKYDNQLKYVEEVIGRKPGQTYGALNVLMLPNQTLFVTDTHVNENPSADEIANITIQAAEEMLRFGVMPKIALLSHSNFGSRPTDSSRKMAHARKLVAERAPHLEVDGEMHADAALSESIRLQAYPDSTLKGRANLLVMPNLDTGNITYNMLKMTGSNGIAMGPILLGSARPVHILTTSATVRRIVNMTALAVVDAQQEAAEG
>CP018038.1|AUK97785.1|2950068_2952765_+|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MCNAQAGATPPQIPDPDPVETAEWCEALDSLTQAGGPERAAYVLQQLLARATALGVRAPGITRTAYLNTIAADQEPPFPGNLSLEERIASINRWNALAMVVRANQAHGELGGHIASYASAADLFEVGFNHFFRAPAPGFGGDLVYMQPHSAPGIYARAYLEGFLNDVDLAHFRQEITAGAQGLRGLSSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLAMPSDRKVWGIFGDGEMDEPESIAALTLAARERLDNLVFVINCNLQRLDGPVRGNGRIIDELETLYAGAGWNVIKLVWGGDWDALLRRDPDGVLAGTFSHTVDGQFQTFAANDGAYNRQHFFGQDPRLSALVADWSDEAIDRLRRGGHDMVKIHAAYHRATHHRGQPTVILAQTKKGFGMGTAGQGKMTTHQQKKLDDEALLAFRDRFALPISDADCLALKFYKPAEDSAELRYLESRRAALGGYLPRRRTEAPRLAPPPVADWARFALQAAGKEMSSTMAIVRMLTALLKDPQLGPRIVPIVADEARTFGMANLFRQVGIYSAQGQLYEPEDIGSVLAYREARDGQILEEGITEAGAISSWTAAGTSYSVNGLPMLPFYIYYSMFGFQRIGDLIWAAADQRTRGFLIGATSGRTTLGGEGLQHQDGYSHLAAAAVPNCRAYDPAYAYEVAVLVEHGMQRMLDEQCDEFYYLTVTNENLAQPDMPEGEETRTGILRGMHRVRAADATPQVRLLGAGPMLDEAMRAAQLLRDEHGLDAEVWSVTSFSELARGGRGAERAQALGLPCPDGNWLAQCLGDQATPVVAVSDYVRAVPEQIRAWVPGPYRVLGTDGFGHSDTRARLRDFFEVGAPWIVLHALDLLAREDSAWQPALQARREQLQAATRNVPSWQS
>CP018038.1|AUK97784.1|2949454_2949943_-|ArsR-family-transcriptional-regulator
MPPHALDAIDRRILDLLQTDASLTNVELARRVHLSPSPCLARVKALEAAGIIRGYVALADPAQLGLNLNVFIQVSLEKQVESELERFQGAMADCPEVMECYLMTGDADYLLRVVVADMPGLERFIVNRLSRIPGVKNIRSGFALKQVKYQTALPLRQGSGPQ
>CP018038.1|AUK97794.1|2967956_2971187_-|autotransporter-outer-membrane-beta-barrel-domain-containing-protein
MAQASARGMGLRITSLAAALLGVYGAAGAAENRLECIGACPPGQPVAGAHYSGTNLSANREWVVYGEGSNAVFTLQGGSVTASGGLMGAVNAADGARVYLNQVSVRTDAGNGWEAPGVRAEYGALVNVRGGSIATVGGGSYGVQSLDSGTMIELNGTDIRTTDAYSDGLRAEFGGSIRAVGLTINTTGEHAVGAMGADDGTIALRDSRITTSGVDAYGLGTESQVLSPGGVLQVSNTAIQTSGKNAHGVYLQGGSSLNMSGGSIRTTGSGAAGLRVSNGSSVALNGVEVVASGPSLLSTLSATRQQSIVVGAGSNLTRNDGRLLLVRRVAGGELGQVTLTLKSGSYAAGNIENLAADGSRESSALTIVDVQSGAQWAGLVIDDTTAIVNGSQSGQHSGFSTAGDMVLEGGSAPVTFTGVSNIGGSSSLGAGSQTTFGGATTIGQSLAVLPGGSVAFNGPLTIGESVTEGQGTALSFNAPAIIGANVQGAGGAAFTFSGPAQVGGSVQGLDGASFRFSTSAPTAIAGGLSLAGGSSLGGGSPTTPIVVIGGADAVSGAILGGNLDIGGALRMTGASLAPGNSIGTVTVGSVGALSGSTYLAEVNAKGQSDLLVVRSGNVDLAGVSLVVGQENGTGGYVLNHDYTIIKTEAGKIVGEFAAASLDESLASTLVKLDPVKYGAQATQVSLSPDADKLAAARAGLIRNQSAVLDGALSVAGRNASADAVMLMSDTGQRADALDQLSGEVHGSAVSALYSNTQLLNRTVARRMSANLGAGLLAGAPTAQAAGPAAASAMPGTAAYPLWADVVDNWSSFDAKDNAAKAKSNTAGLFIGGDAAVGAGWRVGGALGFTDGRIKADAVDSRSDVTSYTAALYGGNSWAAGKGKLNFLAGVGYTHHDIDSRRSVDVGGAQTLKADYKANTTQLFAELGYQVPVGASSSVEPYAGLAWFNNHSDSFDEDGGPAALHGSGQTDQITTFTLGLRGNTALQLGATETRLSAGLGWRHANGDVDATRKLAFIQGGGTAFTVAGSPVAREAAVLDLAAEVDVGRNAALGLAYGGQFGNGNKENTGSLYLKVRF
>CP018038.1|AUK97795.1|2971468_2972296_-|DNAase
MLIDTHCHLDAAEFDADRMAVARAAREAGVQAIVIPAVERANFATVRQLAHAVDSGAYALGIHPLYVARARDEDLDSLRRAIESALPDPRFVAIGEIGLDFFVAEIASGAPRERQERFYAAQLDLAAEYGLPVLLHVRRSQDILLKHLRRRPGVPGGIAHAFNGSAQQAGAFVEQGFALGLGGAMTYPRALQIRRHAADIGLDHLVLETDAPDIPPAWLYEPERRNTPGQLPRIAAELAALRGQAVADVARATTTTALRVLPRLGALLQDRAATP
>CP018038.1|AUK97796.1|2972329_2973025_-|lipoprotein-releasing-system,-ATP-binding-protein
MTEPNDTGPALQAEHLGKVYDEGPARIEVLSDVSLSVARGEMVAIVGASGSGKSTLLHILGLLDVPSSGTVSVDGVPAAGLSEKRKSALRNRSLGFVYQFHHLLPEFSALDNVAMPLIVRRENRDRARAQAREVLELVGLAAREEHFPGQLSGGERQRVALARALVTRPACVLADEPTGNLDRHTAHNMFELLTRVNRESGTAFVIVTHDPELAARADRQLHMENGRLQPD
>CP018038.1|AUK98930.1|2973017_2974250_-|ABC-transporter-permease
MARIRQRRGCRDRFISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGAAPERVLQQWRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSDIPRQMVSGKLSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGSISPAGFAPRMRQFTVVGIFSSGHYEYDSTLVFIDDEDAAKVFRESGTAGVRLRVADMQRAPEVAAELTKVLPPYVMAADWSRNNRTWFAAVQTEKRMMFLILALIVAVAAFNLLSSLVMAVKDKQSDIAILRTLGAGPGEVARIFLVQGALIGVVGTLLGVAGGIAIAYNVDVIVPFIERLLGVQFLPREVYFISALPSDPQADDIITIGLTSLVLSLLATLYPSWRASRLQPAQVLRHD
>CP018038.1|AUK97797.1|2974343_2975285_+|hypothetical-protein
MLIVIPGALPAAAVAPELARLLPQHAPTLHGWLQAASARVQAFDAARQGCTPFEGWQLEQAGYQPQPGLPLGAGLGPLRAAGGTPGQPVWLADLAHLMLGADQAALLDPALLDLRADESAQLFEAAAPLFADSGFGATPIDAARWRLTLPAGMAPQTASPAAVAGQRLRAWWTQDVAMRPWRRLLNEIQMVWYEHPVNEARAARGAAPINALWLYGGATPWPAGAPAPARVCDELAATQRAGDWAAWLDALAMLDAAQLAPLAGPHDRPVQPLQLLLLGDDRRAALTLKPRAGLARWLPAPKHNWNAWWSRPV
>CP018038.1|AUK98931.1|2975266_2976967_+|single-stranded-DNA-specific-exonuclease-RecJ
MVSPRLIIRTADLQACQHLEAAGIHPLLSRLWAARGVIHPEQTRMAWPALLPPDRLTHSAHAAAVLADAIEQGKRLLIVADYDCDGATACAVGLRALSAMGADVDFLVPNRFETGYGLSPAVVELACRHRRGKPDIIITVDNGIASVDGVAAANAAGIGVVITDHHLPGDTLPEALAIVNPNQPGCGFGSKHLAGVGVIFYMMLALRAELRRRGVYAPDGGPRLDALSDLVALGTVADVVKLDANNRLLVTQGLQRMRAGRMQPGVRALFAVAGREPRTASGFDLGFALGPRINAAGRLADMSLGIACLTTDDEAQTLEMARELDNINRERRTIEAEMRDQALAAMEAPDAAAGATVCVFDPGWHQGVVGLVASRLKEKFWRPTLAFAPAGEDELRGSGRSIPDVHLRDALDLVSKRHPGLIRKFGGHAMAAGLTLGSGDFAAFAPAFDAAVRELTGRDRFEPLLETDGSLESGYANAEVAGLLQQQVWGAGFAAPLFLDEFTVRSQRLVGGKHLKLALERGHQRFDAIWFGHDQSLPERIQAAYRLEQNIWNGMVSVQLVIEHAA
>CP018038.1|AUK97798.1|2977241_2978174_+|peptide-chain-release-factor-2
MGREKKSLEDVVETLTELGSGLADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTDVGWGHQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQGV
>CP018038.1|AUK97799.1|2978203_2978959_+|short-chain-dehydrogenase
MTDTVAILTGASRGLGAALARGLLAPGTRLITLARRADPDLEAAARTRGASLEQVQVDLSDPAAAGAAAKRLCAALPRDARRYLLINNAGTVSPVAQAAGLTDGAAIAGALNLNVTAVVLLTARFVAALQGLPADRRVLNISSGAGRNPNAGWGVYCAAKAALDMYSRVLKQEQGQDGVRVVALAPGIVDTDMQGAIRASDPADFPALERFREFHATGKLSAPADVAARILAYLDRDDFGTTEIDDIRNYQ
>CP018038.1|AUK97800.1|2978965_2980486_+|lysine--tRNA-ligase
MTDQSPAPTAQDENRLIAERRAKLARLRETGVAFPNNFVPDAHAADLHARYDGLDQEALTAAAVTVKVAGRMMLKRVMGKASFATLQDGSGRIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFKTNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKAVGGIRQAMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAVLSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANVEGPPLARAGLGALQLALFEETAEAKLWRPTYIIDYPVEVSPLARASDTRDGITERFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFPHLRRED
>CP018038.1|AUK97801.1|2980528_2980831_+|hypothetical-protein
MAALAYLLLSRRARPAAAPRPLRALPAGRRRMPLYLGVAAVLALAGALLSAFLLVTAMAGGSGGGYRGQADFLQQVAIVLLAIGVVCAIAALVSFFRQRG

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Crispr_ID: CP018038_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018038_3

3682479-3682572

Orphan

Consensus_repeat	Method
GTGCCTGTCCCGGCGGGGACAGGCAC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of CP018038_3

>merge|CP018038|3|3682479-3682572|CRISPRCasFinder
GTGCCTGTCCCGGCGGGGACAGGCACGCCCGCACAGCGGGCGCAGCGTGGGGGTTTTCCTGGGCCCGGGTGCCTGTCCCGGCGGGGACAGGCAC

>CP018038|3|3|3682479-3682572|CRISPRCasFinder
GTGCCTGTCCCGGCGGGGACAGGCAC	GCCCGCACAGCGGGCGCAGCGTGGGGGTTTTCCTGGGCCCGG
GTGCCTGTCCCGGCGGGGACAGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP018038.1\|AUK98367.1\|3675387_3676620_-\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
CP018038.1\|AUK98377.1\|3691078_3692284_-\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|129314
CP018038.1\|AUK98979.1\|3679988_3681389_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224089
CP018038.1\|AUK98371.1\|3681921_3682392_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
CP018038.1\|AUK98366.1\|3674609_3675395_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181723
CP018038.1\|AUK98379.1\|3693549_3694044_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP018038.1\|AUK98380.1\|3694173_3695232_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133030
CP018038.1\|AUK98373.1\|3683332_3684235_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018038.1\|AUK98376.1\|3689570_3691082_-\|TRAP-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270238
CP018038.1\|AUK98980.1\|3688241_3689555_+\|short-chain-fatty-acid-transporter	unknown	unknown	gnl\|CDD\|224942
CP018038.1\|AUK98368.1\|3676815_3677571_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223930
CP018038.1\|AUK98370.1\|3681488_3681833_+\|TIGR01244-family-protein	unknown	unknown	gnl\|CDD\|225984
CP018038.1\|AUK98378.1\|3692479_3693457_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018038.1\|AUK98369.1\|3677681_3678200_+\|methyltransferase	unknown	unknown	gnl\|CDD\|224204
CP018038.1\|AUK98375.1\|3687871_3688051_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377342
CP018038.1\|AUK98364.1\|3672583_3673561_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176106
CP018038.1\|AUK98372.1\|3682802_3683201_+\|elongation-factor-G	unknown	unknown	gnl\|CDD\|234569
CP018038.1\|AUK98374.1\|3686727_3687462_+\|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235574
CP018038.1\|AUK98365.1\|3673571_3674543_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
CP018038.1\|AUK98363.1\|3671285_3672458_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841

Protein	Function_ID	Function_description	E-value
CP018038.1\|AUK98367.1\|3675387_3676620_-\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.36236e-118
CP018038.1\|AUK98377.1\|3691078_3692284_-\|sodium/glutamate-symporter	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	1.2444e-106
CP018038.1\|AUK98979.1\|3679988_3681389_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.43796e-109
CP018038.1\|AUK98371.1\|3681921_3682392_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.38587e-30
CP018038.1\|AUK98366.1\|3674609_3675395_-\|enoyl-CoA-hydratase	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	5.15941e-155
CP018038.1\|AUK98379.1\|3693549_3694044_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.34959e-07
CP018038.1\|AUK98380.1\|3694173_3695232_+\|glycosyltransferase	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	4.18053e-89
CP018038.1\|AUK98373.1\|3683332_3684235_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	5.3673e-23
CP018038.1\|AUK98376.1\|3689570_3691082_-\|TRAP-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270238	cd13520, PBP2_TAXI_TRAP, Substrate binding domain of TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This group includes Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family and closely related proteins. TRAP transporters are ubiquitous in prokaryotes, but absent from eukaryotes. They are comprised of an SBP (substrate-binding protein) of the DctP or TAXI families and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function. The substrate-binding domain of TAXI proteins belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and tworeceptor cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.13066e-82
CP018038.1\|AUK98980.1\|3688241_3689555_+\|short-chain-fatty-acid-transporter	gnl\|CDD\|224942	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism].	6.57351e-166
CP018038.1\|AUK98368.1\|3676815_3677571_-\|hypothetical-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.14565e-78
CP018038.1\|AUK98370.1\|3681488_3681833_+\|TIGR01244-family-protein	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	3.40043e-35
CP018038.1\|AUK98378.1\|3692479_3693457_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.0826e-23
CP018038.1\|AUK98369.1\|3677681_3678200_+\|methyltransferase	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.12064e-44
CP018038.1\|AUK98375.1\|3687871_3688051_+\|hypothetical-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	0.00323203
CP018038.1\|AUK98364.1\|3672583_3673561_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176106	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LTTRs involved in degradation of aromatic compounds, such as CbnR, BenM, CatM, ClcR and TfdR, as well as that of other transcriptional regulators clustered together in phylogenetic trees, including XapR, HcaR, MprR, IlvR, BudR, AlsR, LysR, and OccR. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.33368e-60
CP018038.1\|AUK98372.1\|3682802_3683201_+\|elongation-factor-G	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	1.37761e-90
CP018038.1\|AUK98374.1\|3686727_3687462_+\|DNA-polymerase-III-subunit-epsilon	gnl\|CDD\|235574	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional.	2.40573e-142
CP018038.1\|AUK98365.1\|3673571_3674543_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.06741e-117
CP018038.1\|AUK98363.1\|3671285_3672458_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	4.27565e-82

>CP018038.1|AUK98371.1|3681921_3682392_+|universal-stress-protein
MFKKILIPTDGSPLSAQAANAGICFARSTGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKASAEQAEKYLKLILDRAETAGVKAESRAVSNFNVADGIVQAAGEAGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAHTAVLVYRVKEDKDKK
>CP018038.1|AUK98370.1|3681488_3681833_+|TIGR01244-family-protein
MSAAIKPLTENFAVAPQLGPADMADVAAAGYKSVIINRPDFEGGPDQPTAADVSQAAQALGLQVEYQPVVGSAMTAADVARFAELLRTMPGPVLAYCRTGTRCTNLFAAAQQLG
>CP018038.1|AUK98979.1|3679988_3681389_+|GntR-family-transcriptional-regulator
MRQADATLVTQLADDLARRIDEHGLRPGTRLPSIRRMAEQSGVSRFTVVEAYDRLVARGLVQSRHGAGFFVRARSASLTALASARVPQAAPETPVRVDVSWLLRNMFRETAAGMPGGAGLLPPEWLDPDMVAAAVRAVGRTVRGNLVSYGSPQGYAPLRQQLASMLQADGVPAHPERNLLTTNGVTHGLDIVARHLIKPGDTVLVEDPAWFVIFGRLAAFGARPVGVPRGPDGPDLAMLDRLAAEHKPRLYIINGAVHNPIGHTLSAGAAYDILRLAERHDFMVVEDDTYADLHPGGAMKLAALDRLERVILVGGFSKMLAASLRVGYIAAGAETLQRLTDLKMLAGLTSPELGERVVHRVLVEGQYQRHIERVRARVNEARLRSIQALQQLGLSVPHEPHAGMFVWADCGRDSEPVARNAAERGMLLAPGTLFSPSGAPSTMLRFSVAMVDTPGIWQSIAAVMAQ
>CP018038.1|AUK98369.1|3677681_3678200_+|methyltransferase
MDTVWMEIWTTVRNEFADIPDVAEATRIVLRLGMAVALGGLLGYERERSGKAAGLRTHMLVALGAALFVLVPLQGGMEVGDLSRVLQGVIAGIGFLGAGVIIKLGNEGEIRGLTTSAGIWLTAAIGVAAGMGREATALASTLIALFVLAALRRLEKRIAARDDKRVVAQPPP
>CP018038.1|AUK98368.1|3676815_3677571_-|hypothetical-protein
MDYLVSLAQQPAAWAALATLIAMEVVLGIDNLIFISILTNKLPPQHQTKARRIGIGMALILRLALLGTVAFIVQLTQPVFELFGHGFSWRDVILVAGGLFLVWKATKEIHHHVDPNPGDDMFGGKAATLGFAAAVAQILMLDLVFSIDSIITAVGMTEHIPIMFVAVIVAVAVMLLAAEPLARFIERNPTVVMLALAFLMMIGMTLIAEGFGAHVPKGYIYAAMAFSALVEGLNMMARRAREGRGAGAAGG
>CP018038.1|AUK98367.1|3675387_3676620_-|CoA-transferase
MSGPLEGVRILDVTTVLMGPYATQILGDLGADVIKVEPPAGDNVRGIGPGRHADMGGIFLHANRSKRSIALDLKNPAGREALLKVAATCDVLVYNVRPQAMARLGLSYAEVAQANPSILYVGMYGYDQRGPYAARAAYDDLIQGAVGIPSLSVEAGSDIPRYAPSAMVDRIVGISAANAVTAGLYHRARTGQGQAIDVPMFETMAHLILGDHMMGQTFEPPLGPPGYPRILNADRRPYATRNGHICVLLYADKHWKAFFELIGQPGRDAADPRFRDIGTRTQHIHAIYRLVSDAIASRTTEEWLAAFEAADIPAMPVHTMASLLRDPHLEAIGFFGMVDHPSEGAVRMMAVPSRWSGTPPQPRGHAPRLGEHSVDVLKEAGYDDEAIAALVRNGAAIAAARQLPEGTDHD
>CP018038.1|AUK98366.1|3674609_3675395_-|enoyl-CoA-hydratase
MTDFLRHERHGGVLLLTMDRERTRNALSDADAVEALVQACARIGADLSVRAVVLTGSHGVFSSGGNLKTLSDTVGAGLGEPVHSLQAYRSGIQRIPLALYNLEVPTIAAVNGPAIGAGCDLACMCDIRLAARQASFAESFVKLGLTPGDGGAWLLPRIVGMSRACELAFTGRSIDAARARELGLVSEVFDADALLPAALALAQEIAQHSGHALRLTKRLLREGQHTRLDTLLELSAGFQALAHHTQEHAGALDAHLSRKRG
>CP018038.1|AUK98365.1|3673571_3674543_-|ABC-transporter-substrate-binding-protein
MHSRTLALALLSVAALAQGGSARAASDYPAHPVKIIVSLPPGSGADTTARFLSKHLAERFKQPFVVENRPGGNSFIAAQAVATAPPDGYTLFVASNSPMTTNAAVFKNLPYDAVKDFAPVAPIARFPMALVVPANSPYRSVADLVAAARAAPGQLNFASGTATYQVVLELFHEQNGIKATHVPYKGTSAALADVAGGVVQYSVADVSAALPLIRGGKLRPLAVTSTRRIKDLPDVPTMQESGNKGFEAYAWTAAFFPAKVDPAIVARVSDAVQALVRSQEGKAFMEQLGGEPFVGGPDTLAAFQRDELASMRRIAKLANIQQE
>CP018038.1|AUK98364.1|3672583_3673561_+|LysR-family-transcriptional-regulator
MWTGQYIVHIASPAHHWRRAVELRQLKQLLVLSETLNFHRAAERLHMAQPPLSTAIKKLEQELGVQLFERLPAGLQPTPAAEVVLRYARATLFYADEIQRAAQEGASGKQGMLKVGFVGSSIYSLMPQLLSAFRKDYPRVDLVIEESTTVDLLRRLDAHTLDVALVRFPVLEPSTARITLLQADHLMLAVPAGSRYAQRDDVALDELADEPFIGYSRTHVPGMHALIMYAFQQYGVVPHIAQEAIQVQTILSLVESGLGLAIVPKVACRQAGSGVRLVNVPQLAETIKVGIALAVHPDNATPTTANFVDMACRLMQTEPAAGQAR
>CP018038.1|AUK98363.1|3671285_3672458_-|acyl-CoA-dehydrogenase
MGAILGTIIEALQLAAIPAHDEALRPAVRAFLDEALREMPADRRARSWMGHDAEFSRALARQGWLGLTLPVEYGGAGRSNFARFVLSEELLAVGAPVSAHWVADRQTAPLILRFGSPAQRAFYLPRIIRGEAFFAIGMSEPDTGSDLASVRTRATPVADGWLLNGRKIWTTNAHRSHYMCALVRTSGAPEDRHRGLSQMIFDLALPGIEIRPIRDIAGDAHFCEVLFDNVLLPHDALVGEEGSGWRQVMAELALERSGPERIYSSMVLLDGWLAHLRCDAAPQRAQVCLAGRLAARLAVLRSMSLAVSQRLEQGADASLAAVLVKDLGTEFEQAVPELIGQALHASPQPAPDDVLMRTLAYLTLINPTFSLRGGTRHILRGIIARELGLR
>CP018038.1|AUK98372.1|3682802_3683201_+|elongation-factor-G
MTRRTSIERYRNIGISAHIDAGKATTTERILFYTGITHKLGEVHEGAATMDWMEQEQGRGITITSAATTAFWRGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQEVATVMVVLPGQ
>CP018038.1|AUK98373.1|3683332_3684235_-|IS481-family-transposase
MVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDKYNLLTVHS
>CP018038.1|AUK98374.1|3686727_3687462_+|DNA-polymerase-III-subunit-epsilon
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSDPEALAVHGLTTEFLADKPRFAEVAEQFLAFIADAELIAHNAAFDVKFFNAELQRIGRDPLNTHCENIVDSLLHARSLHPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVDDQGANANGALVLGKFDASVLTVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAESGQPG
>CP018038.1|AUK98375.1|3687871_3688051_+|hypothetical-protein
MHPDTNTMLIIIAAAVALMIVGFGLRDRNLGLGLLGIGLIAALATIAYKAYITFNSFYY
>CP018038.1|AUK98980.1|3688241_3689555_+|short-chain-fatty-acid-transporter
MFKLMSRSAVKMVERYLPDPYVFVVLLTLVAAGAAMIIEGQTPMAVVRWWGNGFWGLLTFAMQMLLVLVTGYMLASTPLVKRMLARLASLATSAGGAIILVSVVSLAASWINWGFGLVVGALFAKQIARQVRVDYRLLVASAYSGFIIWHGGLAGSIPLTIATEGHFSADKIGIIPTGDTIFAVFNLVIVVAMFILVPLVNRLMLPDEKESVYVDPARLEEASVPASDDDKRPAARLENSRLLAWLIAAGGLAYMFDYYVVRGAGLNLNVINFSFLILAILLHGTPRRLLASLDEAIKGGAGIVIQFPFYAGIMAIMMDSGLAATLSEWFVSIASAATLPFWTFISAGIVNIFIPSGGGQWAVQSPIVISAAQALGADMPRVAMAVAWGDAWTNMLQPFWALPVLAIAGLKAKDIMGYCIIQLLVTGVIISVGLSFF
>CP018038.1|AUK98376.1|3689570_3691082_-|TRAP-ABC-transporter-substrate-binding-protein
MTMFIRWLILSACLLLAACSRAPDTEILQRDVGQTLAATYGPDLFDIVALRRMGSATDSTAPPGQTRRVVYYDVVLGLKKDLTLGAWDQPGAAALVSLLGAGPRSISGVKSSGNAAGDQIVAHASAIYQRDAEQWVHVAPASFTATEAPSLDTGAPPPVTRQLLQTLEQITRSVPYSASSTAQHVVQQELERSVARINGRLARLQKGYPLATGPDKGEYLAFGQALAAIGRNEQVRVIPLITGGSADNMAMLRSGAAVAALSQADIAQLAYEGKGPFESQGPFSGLRALGSLYPELVHIVVRQGDGIATVGALRGKKIALGPSGSAVRTTLETVLAAHGLQPGRDYAVIDTPAAAALPQLSEGRVDAVAQVIGTPAAPLRAALTQARLALLPLDRAAIDKLVQADPTLMALDIPANTYPSQAAAIPTVGMAALLVTTADLTRDEAAHMVDVVYRAGQDLLAAGSAQGAQVSAANAGRGLSIPLHDGAVEAFEKLGAPPLPEGR
>CP018038.1|AUK98377.1|3691078_3692284_-|sodium/glutamate-symporter
MISLTPVQSLLACCLVLVAGRILTTRIGVLSRYSIPDPIVGGLLFAVLATALDTWGGIQISLETNIKPTLLLIFFGCIGLTADLKLLARGGPRLIAFLLALIPFLVLQNAVGLGLAWLLDMHPLMGLIGGTITLVGGHGTGAAYAARFADINNIQDVMALAMTAATIGLVLGGIIGGPVAEWLIRRHKLDPRMAGKDANQVLPEVETTAEAPTATSFITSLTAVFVTVVVGTYLAGLVEDAPISLPNFLWCLATGAIIRNFGGYVGIRLDDRVSEIIGSISLSLFLGLTMMTLDLSSVVRLAGPLALMLVAQALVCALYAGWAVFRMLKRDYEAAVMAAAFCGFAMGATATAIANMQALTRRHGPAPESFIVVPVTGAFLVDILNVIVLTSLIALPFVGGM
>CP018038.1|AUK98378.1|3692479_3693457_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHSYMVRADLAG
>CP018038.1|AUK98379.1|3693549_3694044_-|GNAT-family-N-acetyltransferase
MPQSYIVRTMRPADVEAVLRVQAAVYPASLLESAALFQNRIEIAPATCQVALDGQDLIGYLIAYPWDAGLPPALDRSLERLPGAADTWFVHDCAVLPAAQGGGVAAALLAGGRAQARRLGLRRASLVALAQAVGYWLRHGYQPLADSDALRAKLAGYGDGARYM
>CP018038.1|AUK98380.1|3694173_3695232_+|glycosyltransferase
MFMYTEFRSQLLAGAGTSAAGQSARMAVLAGDGATGVQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGIRYVQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVRRQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGLYAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLSLSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFIARQRRGRAKRAAKARSQ

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Crispr_ID: CP018038_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018038_4

3863931-3864015

Orphan

Consensus_repeat	Method
CTGTCCCCGCGGGGACAGGCACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP018038_4

>merge|CP018038|4|3863931-3864015|CRISPRCasFinder
CTGTCCCCGCGGGGACAGGCACCCTGTCATACGCCATGAACGCTTGACGGCCAAGACGGTATCTGTCCCCGCGGGGACAGGCACC

>CP018038|4|4|3863931-3864015|CRISPRCasFinder
CTGTCCCCGCGGGGACAGGCACC	CTGTCATACGCCATGAACGCTTGACGGCCAAGACGGTAT
CTGTCCCCGCGGGGACAGGCACC

Protein	Signature genes	Signature genes Name	Protein_function
CP018038.1\|AUK98541.1\|3868586_3869543_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270296
CP018038.1\|AUK98542.1\|3873226_3874270_+\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270320
CP018038.1\|AUK98537.1\|3865327_3866029_+\|DnaA-regulatory-inactivator-Hda	unknown	unknown	gnl\|CDD\|236347
CP018038.1\|AUK98538.1\|3866025_3866724_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319796
CP018038.1\|AUK98536.1\|3864025_3865075_-\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
CP018038.1\|AUK98990.1\|3860367_3860988_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182775
CP018038.1\|AUK98539.1\|3866724_3868080_+\|poly(A)-polymerase	unknown	unknown	gnl\|CDD\|130997
CP018038.1\|AUK98991.1\|3870953_3872213_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129868
CP018038.1\|AUK98532.1\|3858372_3858909_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|223873
CP018038.1\|AUK98533.1\|3858839_3860225_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|182376
CP018038.1\|AUK98544.1\|3875073_3875829_-\|gamma-hydroxybutyrate-dehydrogenase	unknown	unknown	gnl\|CDD\|185358
CP018038.1\|AUK98529.1\|3854713_3855697_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270295
CP018038.1\|AUK98527.1\|3851888_3853643_-\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
CP018038.1\|AUK98531.1\|3856829_3858221_-\|fumarate-hydratase,-class-II	unknown	unknown	gnl\|CDD\|234779
CP018038.1\|AUK98535.1\|3862978_3863920_+\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
CP018038.1\|AUK98534.1\|3861092_3862982_+\|DNA-mismatch-repair-protein-MutL	unknown	unknown	gnl\|CDD\|234630
CP018038.1\|AUK98540.1\|3868076_3868568_+\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|172582
CP018038.1\|AUK98543.1\|3874313_3875057_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
CP018038.1\|AUK98530.1\|3855832_3856813_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223751
CP018038.1\|AUK98528.1\|3853749_3854649_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107

Protein	Function_ID	Function_description	E-value
CP018038.1\|AUK98541.1\|3868586_3869543_-\|hypothetical-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	6.01101e-118
CP018038.1\|AUK98542.1\|3873226_3874270_+\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99378e-85
CP018038.1\|AUK98537.1\|3865327_3866029_+\|DnaA-regulatory-inactivator-Hda	gnl\|CDD\|236347	PRK08903, PRK08903, DnaA regulatory inactivator Hda; Validated.	2.81236e-100
CP018038.1\|AUK98538.1\|3866025_3866724_+\|hypothetical-protein	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.91431e-64
CP018038.1\|AUK98536.1\|3864025_3865075_-\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
CP018038.1\|AUK98990.1\|3860367_3860988_-\|hypothetical-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	8.25718e-70
CP018038.1\|AUK98539.1\|3866724_3868080_+\|poly(A)-polymerase	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	4.58369e-147
CP018038.1\|AUK98991.1\|3870953_3872213_-\|hypothetical-protein	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.48771e-95
CP018038.1\|AUK98532.1\|3858372_3858909_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	2.28113e-54
CP018038.1\|AUK98533.1\|3858839_3860225_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	1.25625e-84
CP018038.1\|AUK98544.1\|3875073_3875829_-\|gamma-hydroxybutyrate-dehydrogenase	gnl\|CDD\|185358	PRK15461, PRK15461, sulfolactaldehyde 3-reductase.	1.19571e-122
CP018038.1\|AUK98529.1\|3854713_3855697_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.35876e-158
CP018038.1\|AUK98527.1\|3851888_3853643_-\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
CP018038.1\|AUK98531.1\|3856829_3858221_-\|fumarate-hydratase,-class-II	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
CP018038.1\|AUK98535.1\|3862978_3863920_+\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	4.17279e-156
CP018038.1\|AUK98534.1\|3861092_3862982_+\|DNA-mismatch-repair-protein-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
CP018038.1\|AUK98540.1\|3868076_3868568_+\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|172582	PRK14092, PRK14092, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.	2.78166e-87
CP018038.1\|AUK98543.1\|3874313_3875057_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.58304e-45
CP018038.1\|AUK98530.1\|3855832_3856813_+\|hypothetical-protein	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.13912e-41
CP018038.1\|AUK98528.1\|3853749_3854649_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.62875e-38

>CP018038.1|AUK98535.1|3862978_3863920_+|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMDIGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTMLYYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQRALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAGLVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLTWLRAQPERVIIDCLAGDAVARTVDAMARALPD
>CP018038.1|AUK98534.1|3861092_3862982_+|DNA-mismatch-repair-protein-MutL
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>CP018038.1|AUK98990.1|3860367_3860988_-|hypothetical-protein
MVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPFLPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLDRNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVISLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ
>CP018038.1|AUK98533.1|3858839_3860225_+|N-acetylmuramoyl-L-alanine-amidase
MVERDCPPAHGALSPRAAARRRLISVAATLLVLPVVPRLAHAATILAVRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAALNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDLYPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAPPIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQPYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGASSTQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKINRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRYFTANPPLARVGDVS
>CP018038.1|AUK98532.1|3858372_3858909_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MSAPPTTLCLHLPDEAATENLARQLAPLVDGRRGGQPGGQIHLQGDLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAGFRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVPPPTARSLPAPPPADA
>CP018038.1|AUK98531.1|3856829_3858221_-|fumarate-hydratase,-class-II
MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPALKALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLHQLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALKTLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVMGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDMTNARR
>CP018038.1|AUK98530.1|3855832_3856813_+|hypothetical-protein
MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRHKLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWLAGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAVYGLARHSGNGLLRELARNPLLVSTLLSLACNLAGLSLPGPIDTVMARLGAAALALGIMCVGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTASAAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN
>CP018038.1|AUK98529.1|3854713_3855697_-|ABC-transporter-substrate-binding-protein
MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGSTDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD
>CP018038.1|AUK98528.1|3853749_3854649_+|LysR-family-transcriptional-regulator
MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGLLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANNHPGLTRTSLGHTELVHLSRLPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIERLRQACSVLQAQPAPQPE
>CP018038.1|AUK98527.1|3851888_3853643_-|gamma-glutamyltransferase
MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERAQAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVHYDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHRQHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVGHRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVREPVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFADRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAIEVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVANRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIALPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPRREGLALGD
>CP018038.1|AUK98536.1|3864025_3865075_-|phosphoribosylformylglycinamidine-cyclo-ligase
MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIGGFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDVVMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPKLFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQDGMAQTVVV
>CP018038.1|AUK98537.1|3865327_3866029_+|DnaA-regulatory-inactivator-Hda
MNRQLLLDVLPAPAPALNNYIAGPNGQALAAAHALTAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMPRLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRLGWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITIPLLRAMLADPHSQAT
>CP018038.1|AUK98538.1|3866025_3866724_+|hypothetical-protein
MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLFDHLEDAKS
>CP018038.1|AUK98539.1|3866724_3868080_+|poly(A)-polymerase
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEETAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
>CP018038.1|AUK98540.1|3868076_3868568_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MNGSPASTLAYVGLGASLGDAAATLRSVLAELAAAPGILACKASRLYRTAPVEAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLLLYGEQAIDHPRLSVPHPRMHERAFVLAPLCELVPALRLAQGDCAALLAALEDQAIEPLR
>CP018038.1|AUK98541.1|3868586_3869543_-|hypothetical-protein
MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDALARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQVPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQALATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTGSKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQMLERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP
>CP018038.1|AUK98991.1|3870953_3872213_-|hypothetical-protein
MMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGGLLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDMIERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACFMLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAAIGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVVNLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFLVLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMWLPQQVK
>CP018038.1|AUK98542.1|3873226_3874270_+|C4-dicarboxylate-ABC-transporter-substrate-binding-protein
MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPGDGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEPRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIHKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLEFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVSNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTLGKSASN
>CP018038.1|AUK98543.1|3874313_3875057_+|GntR-family-transcriptional-regulator
MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVGRFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIYQVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDGAGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSLHVRNAASVAIAILQDSLADAAATAE
>CP018038.1|AUK98544.1|3875073_3875829_-|gamma-hydroxybutyrate-dehydrogenase
MLPTATHIQAALEGADGALQGMGPGALFINMSTILPQETDLIAQRLAERGMRMLDSPVGRSAMEAQRGTLLILASGSAQDKARARDALLCMGNQVIDCGEVGGGSRVKVVNNFMGISLNALTAEALTLAEASGLSVELALEVMRGTIAGLGHMNITYPNKVLRGDLSAGFQVDLAHKDLGLALELAARSRACVPMGSAAFQSYTAARAQGRGGQDYSAIYPVMRSLSGLPEALPYQVDTPVEADPFGAAAR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

27282 : 78580

Synechococcus_phage(25.0%)

tRNA,protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK95439.1\|27282_28185_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK95440.1\|28314_28614_-	hypothetical protein	NA	NA	NA	NA
AUK95441.1\|28674_29109_-	hypothetical protein	NA	NA	NA	NA
AUK95442.1\|29141_30359_-	thiolase	NA	NA	NA	NA
AUK95443.1\|30364_30862_-	dehydratase	NA	NA	NA	NA
AUK95444.1\|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK98734.1\|32214_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUK95445.1\|33048_34470_+	2-methylcitrate dehydratase	NA	NA	NA	NA
AUK95446.1\|34625_35576_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK95447.1\|35572_36763_-	MFS transporter	NA	NA	NA	NA
AUK95448.1\|37012_37924_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
AUK95449.1\|37925_40064_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
AUK95450.1\|40060_40600_+	D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AUK95451.1\|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AUK95452.1\|41318_42212_+	hypothetical protein	NA	NA	NA	NA
AUK95453.1\|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA
AUK95454.1\|42687_43218_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.7e-12	35.4
AUK95455.1\|43346_43526_-	hypothetical protein	NA	NA	NA	NA
AUK98735.1\|45223_45748_+	hypothetical protein	NA	NA	NA	NA
AUK95456.1\|45719_45956_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AUK95457.1\|46083_46977_+	hypothetical protein	NA	NA	NA	NA
AUK95458.1\|48146_49394_+	homoserine O-acetyltransferase	NA	NA	NA	NA
AUK95459.1\|49390_50005_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
AUK95460.1\|50375_50765_+	hypothetical protein	NA	NA	NA	NA
AUK95461.1\|50737_51088_+	hypothetical protein	NA	NA	NA	NA
AUK95462.1\|51130_52387_+	muropeptide transporter AmpG	NA	NA	NA	NA
AUK95463.1\|53618_54353_-	glutamate racemase	NA	NA	NA	NA
AUK95464.1\|54358_54949_-	arginine transporter ATP-binding subunit	G9BWD6	Planktothrix_phage	3.2e-20	33.6
AUK95465.1\|54973_55663_-	amino acid ABC transporter permease	NA	NA	NA	NA
AUK95466.1\|55659_56421_-	glutamate ABC transporter permease	NA	NA	NA	NA
AUK95467.1\|56500_57400_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK95468.1\|57493_58444_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK95469.1\|59244_60471_-	serine kinase HipA	NA	NA	NA	NA
AUK95470.1\|60470_60890_-	transcriptional regulator	NA	NA	NA	NA
AUK98736.1\|61073_62015_-	hypothetical protein	NA	NA	NA	NA
AUK95471.1\|62438_63413_-	hypothetical protein	NA	NA	NA	NA
AUK95472.1\|63469_64051_-\|protease	protease	NA	NA	NA	NA
AUK95473.1\|64063_64366_-	ferredoxin	NA	NA	NA	NA
AUK95474.1\|64484_65543_-	oxidoreductase	NA	NA	NA	NA
AUK95475.1\|65577_66849_-	hypothetical protein	NA	NA	NA	NA
AUK95476.1\|66879_67134_-	hypothetical protein	NA	NA	NA	NA
AUK95477.1\|67478_68660_-	hypothetical protein	NA	NA	NA	NA
AUK95478.1\|70124_70439_+\|transposase	transposase	NA	NA	NA	NA
AUK95479.1\|71631_73539_+	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.1e-117	37.2
AUK95480.1\|73700_74321_-	glutathione S-transferase	NA	NA	NA	NA
AUK95481.1\|74352_74934_-	N-acetylmuramoyl-L-alanine amidase	A0A1W6DX33	Sphingobium_phage	1.7e-05	54.3
AUK95482.1\|75022_75274_-	hypothetical protein	NA	NA	NA	NA
AUK95483.1\|75275_76118_-	hypothetical protein	NA	NA	NA	NA
AUK95484.1\|76223_77633_+	signal recognition particle protein	NA	NA	NA	NA
AUK95485.1\|77629_78580_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

322452 : 358175

Bacillus_virus(11.11%)

integrase,transposase

attL 316932:316949|attR 361572:361589

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
316932:316949	attL	NA	NA	NA	NA
AUK95704.1\|322452_323403_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK95705.1\|323426_324485_-	Zn-dependent hydrolase	NA	NA	NA	NA
AUK95706.1\|324559_324934_+	MerR family transcriptional regulator	NA	NA	NA	NA
AUK95707.1\|325147_325492_+	hypothetical protein	NA	NA	NA	NA
AUK95708.1\|325488_326439_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK95709.1\|327995_328841_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUK95710.1\|328928_330092_-	alpha-hydroxy-acid oxidizing enzyme	NA	NA	NA	NA
AUK95711.1\|330222_330426_-	hypothetical protein	NA	NA	NA	NA
AUK98752.1\|330510_331482_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK95712.1\|331520_332948_-	amidase	NA	NA	NA	NA
AUK95713.1\|333067_333859_+	IclR family transcriptional regulator	NA	NA	NA	NA
AUK95714.1\|333977_336431_-	DNA gyrase subunit B	G3M9Z3	Bacillus_virus	2.3e-112	34.8
AUK95715.1\|336525_337635_-	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	1.2e-41	32.6
AUK95716.1\|337637_339047_-	chromosomal replication initiation protein DnaA	NA	NA	NA	NA
AUK95717.1\|339452_339587_+	50S ribosomal protein L34	NA	NA	NA	NA
AUK95718.1\|339682_340054_+	ribonuclease P protein component	NA	NA	NA	NA
AUK95719.1\|340050_340323_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.0e-15	52.2
AUK95720.1\|340371_342063_+	membrane protein insertase YidC	NA	NA	NA	NA
AUK95721.1\|342293_343244_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK95722.1\|343701_344625_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK95723.1\|344633_345032_-	hypothetical protein	NA	NA	NA	NA
AUK95724.1\|345273_347244_+	hypothetical protein	NA	NA	NA	NA
AUK95725.1\|348730_349720_+\|integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	4.4e-75	44.4
AUK95726.1\|349716_349917_-	hypothetical protein	NA	NA	NA	NA
AUK95727.1\|349917_350037_-	hypothetical protein	NA	NA	NA	NA
AUK95728.1\|350029_350371_-	hypothetical protein	A0A0H5ARN8	Pseudomonas_phage	1.0e-10	45.3
AUK95729.1\|350381_351566_-	hypothetical protein	A0A291L9X3	Bordetella_phage	1.5e-24	37.8
AUK95730.1\|351602_352130_-	hypothetical protein	NA	NA	NA	NA
AUK95731.1\|352187_352835_-	exonuclease	A0A0U2BXF3	Paracoccus_phage	2.0e-31	41.4
AUK95732.1\|352831_353818_-	DNA recombinase	H9C0R8	Aeromonas_phage	2.0e-67	57.3
AUK95733.1\|353821_354004_-	hypothetical protein	NA	NA	NA	NA
AUK95734.1\|354000_354378_-	hypothetical protein	NA	NA	NA	NA
AUK95735.1\|354611_355079_-	hypothetical protein	Q3HQX1	Burkholderia_phage	2.1e-43	71.3
AUK95736.1\|355114_356017_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK95737.1\|356163_356406_-	hypothetical protein	NA	NA	NA	NA
AUK95738.1\|356572_357214_-	hypothetical protein	NA	NA	NA	NA
AUK95739.1\|357224_358175_-\|transposase	IS481 family transposase	NA	NA	NA	NA
361572:361589	attR	NA	NA	NA	NA

DBSCAN-SWA_3

364062 : 407233

Tupanvirus(11.11%)

integrase,tRNA,transposase

attL 363422:363440|attR 369206:369224

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
363422:363440	attL	NA	NA	NA	NA
AUK95746.1\|364062_364269_+\|integrase	integrase	NA	NA	NA	NA
AUK98753.1\|364377_364503_+	hypothetical protein	NA	NA	NA	NA
AUK95747.1\|364534_364666_+	entericidin	NA	NA	NA	NA
AUK95748.1\|364881_372015_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
369206:369224	attR	NA	NA	NA	NA
AUK95749.1\|372066_372648_+	ureidoglycolate hydrolase	NA	NA	NA	NA
AUK95750.1\|372920_373898_+	hypothetical protein	NA	NA	NA	NA
AUK95751.1\|373932_375486_+	long-chain fatty acid--CoA ligase	A0A2K9L3I8	Tupanvirus	1.5e-13	22.6
AUK95752.1\|375493_376234_+	transcriptional regulator	NA	NA	NA	NA
AUK95753.1\|376257_377022_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUK95754.1\|377066_377402_+	alkylhydroperoxidase	NA	NA	NA	NA
AUK95755.1\|377455_378385_+	hypothetical protein	NA	NA	NA	NA
AUK95756.1\|378344_379295_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK95757.1\|379413_380358_-	arginase	A0A0N9R043	Chrysochromulina_ericina_virus	9.5e-27	33.3
AUK95758.1\|380354_381596_-	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	4.0e-25	25.2
AUK95759.1\|381757_382708_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK95760.1\|382704_383379_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUK95761.1\|383463_384459_-	hypothetical protein	NA	NA	NA	NA
AUK95762.1\|384613_385903_-	glycine/D-amino acid oxidase	NA	NA	NA	NA
AUK95763.1\|386154_386346_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AUK95764.1\|386452_387772_+	ribosomal protein S12 methylthiotransferase	NA	NA	NA	NA
AUK95765.1\|387842_388412_-	bacterioferritin	NA	NA	NA	NA
AUK95766.1\|388592_389180_+	Rossman fold protein, TIGR00730 family	A0A2I2L3F0	Orpheovirus	1.1e-07	23.3
AUK95767.1\|389186_389789_+	hypothetical protein	NA	NA	NA	NA
AUK95768.1\|389785_390442_+	HAD family hydrolase	NA	NA	NA	NA
AUK95769.1\|390438_391065_+	flavin-nucleotide-binding protein	NA	NA	NA	NA
AUK95770.1\|391087_392026_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.4e-09	35.7
AUK95771.1\|392091_393042_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK95772.1\|393140_393653_-	peptide deformylase	E3SLL2	Synechococcus_phage	8.5e-22	43.3
AUK95773.1\|393754_395005_-	kynureninase	NA	NA	NA	NA
AUK98754.1\|395141_395627_+	AsnC family transcriptional regulator	NA	NA	NA	NA
AUK95774.1\|395727_396840_+	DNA protecting protein DprA	S6BFL3	Thermus_phage	1.9e-21	35.0
AUK95775.1\|396953_397862_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA
AUK95776.1\|398004_398481_+	hypothetical protein	NA	NA	NA	NA
AUK95777.1\|398515_399532_-	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	3.5e-75	43.8
AUK95778.1\|399645_400887_-	2-aminoadipate aminotransferase	A0A1X9I5H2	Streptococcus_phage	1.9e-14	24.9
AUK95779.1\|402020_402986_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK95780.1\|403032_403524_-	hypothetical protein	NA	NA	NA	NA
AUK95781.1\|403619_404519_-	transcriptional regulator ArgP	NA	NA	NA	NA
AUK95782.1\|404648_405284_+	lysine transporter LysE	NA	NA	NA	NA
AUK95783.1\|405280_406231_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK95784.1\|406330_407233_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

631380 : 695837

Pandoravirus(16.67%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK95963.1\|631380_632370_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK95964.1\|632609_632858_+	hypothetical protein	NA	NA	NA	NA
AUK95965.1\|632894_634028_+	hypothetical protein	NA	NA	NA	NA
AUK95966.1\|634124_635075_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK95967.1\|636297_637200_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK95968.1\|637201_638056_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AUK95969.1\|638102_639212_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
AUK95970.1\|639222_639741_-	flavin reductase	NA	NA	NA	NA
AUK95971.1\|639770_640403_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AUK95972.1\|640474_641134_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
AUK95973.1\|641130_642270_-	MFS transporter	NA	NA	NA	NA
AUK95974.1\|643646_644384_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUK95975.1\|644386_646018_-	acyl-CoA synthetase	NA	NA	NA	NA
AUK98771.1\|646113_647103_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK95976.1\|647099_647810_+	short-chain dehydrogenase	NA	NA	NA	NA
AUK98772.1\|647905_648922_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUK95977.1\|649193_649820_-	aminotransferase	NA	NA	NA	NA
AUK95978.1\|649875_651003_-	aminodeoxychorismate synthase, component I	S4VT78	Pandoravirus	3.8e-38	37.8
AUK95979.1\|651008_656726_-	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	1.0e-195	39.5
AUK95980.1\|657054_657225_+	hypothetical protein	NA	NA	NA	NA
AUK95981.1\|657293_658238_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	8.4e-07	23.2
AUK95982.1\|658426_659362_+	glycosyl transferase	NA	NA	NA	NA
AUK95983.1\|659479_661051_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK95984.1\|661130_662339_+	ABC transporter permease	NA	NA	NA	NA
AUK98773.1\|662887_663754_+	EamA family transporter	NA	NA	NA	NA
AUK95985.1\|666114_666336_+	hypothetical protein	NA	NA	NA	NA
AUK98774.1\|666666_667683_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUK95986.1\|667767_668019_-	cell division topological specificity factor MinE	NA	NA	NA	NA
AUK95987.1\|668022_668838_-	septum site-determining protein MinD	NA	NA	NA	NA
AUK95988.1\|668950_669829_-	septum site-determining protein MinC	NA	NA	NA	NA
AUK95989.1\|669940_671704_-\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	5.0e-162	50.0
AUK95990.1\|671819_673160_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AUK95991.1\|673156_674212_+	cytochrome oxidase	NA	NA	NA	NA
AUK95992.1\|674228_675653_-	ATPase	NA	NA	NA	NA
AUK95993.1\|675652_676354_-	two-component system response regulator OmpR	W8CYM9	Bacillus_phage	5.6e-32	36.6
AUK98775.1\|678903_679875_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK95994.1\|679879_680560_-	hypothetical protein	NA	NA	NA	NA
AUK95995.1\|680697_681090_+	osmotically inducible protein OsmC	NA	NA	NA	NA
AUK98776.1\|681197_682214_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUK95996.1\|682453_683239_-	enoyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA
AUK95997.1\|683333_684743_-	lytic transglycosylase	NA	NA	NA	NA
AUK95998.1\|684753_685554_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AUK95999.1\|685574_686345_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AUK96000.1\|686387_686855_+	ribonuclease HI	J9Q745	Salmonella_phage	5.6e-36	50.7
AUK96001.1\|686851_687802_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96002.1\|687882_689403_-	hypothetical protein	NA	NA	NA	NA
AUK96003.1\|689381_689714_-	hypothetical protein	NA	NA	NA	NA
AUK96004.1\|689749_690628_-	fatty acid desaturase	NA	NA	NA	NA
AUK96005.1\|691554_694533_-	hypothetical protein	NA	NA	NA	NA
AUK96006.1\|694886_695837_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

1063285 : 1126378

Bacillus_virus(28.57%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK96290.1\|1063285_1064236_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96291.1\|1064338_1065001_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUK96292.1\|1065103_1065514_-	hypothetical protein	NA	NA	NA	NA
AUK96293.1\|1065618_1066620_+	amidase	NA	NA	NA	NA
AUK96294.1\|1066622_1067819_+	formyl-CoA transferase	NA	NA	NA	NA
AUK96295.1\|1067839_1068643_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUK96296.1\|1068723_1069020_+	histidine kinase	NA	NA	NA	NA
AUK96297.1\|1069050_1069614_+	hypothetical protein	NA	NA	NA	NA
AUK98797.1\|1069654_1070512_+	ABC transporter permease	NA	NA	NA	NA
AUK96298.1\|1070519_1071269_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.2e-29	33.5
AUK96299.1\|1071290_1072163_+	hypothetical protein	NA	NA	NA	NA
AUK96300.1\|1072191_1072971_+	short-chain dehydrogenase	NA	NA	NA	NA
AUK96301.1\|1073004_1073802_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUK96302.1\|1076456_1076849_+	RidA family protein	NA	NA	NA	NA
AUK96303.1\|1076842_1077703_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUK96304.1\|1077706_1078669_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUK96305.1\|1080994_1081945_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96306.1\|1082008_1082284_+	hypothetical protein	NA	NA	NA	NA
AUK96307.1\|1082294_1083164_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK96308.1\|1083234_1083930_+	hypothetical protein	NA	NA	NA	NA
AUK96309.1\|1083919_1084429_+\|tRNA	tRNA-specific adenosine deaminase	NA	NA	NA	NA
AUK96310.1\|1084425_1085646_+	MFS transporter	NA	NA	NA	NA
AUK96311.1\|1085593_1086496_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK96312.1\|1088706_1090080_+	amidase	NA	NA	NA	NA
AUK96313.1\|1090118_1090820_-	riboflavin synthase subunit alpha	NA	NA	NA	NA
AUK96314.1\|1091118_1092108_+	MFS transporter	NA	NA	NA	NA
AUK96315.1\|1092208_1092670_+	transcriptional regulator	NA	NA	NA	NA
AUK96316.1\|1092685_1093234_-	cysteine dioxygenase	NA	NA	NA	NA
AUK96317.1\|1093375_1094851_-	acid--CoA ligase	Q75ZG1	Hepacivirus	3.0e-35	25.6
AUK96318.1\|1094956_1096048_+	hypothetical protein	NA	NA	NA	NA
AUK96319.1\|1096051_1096834_-	ABC transporter permease	NA	NA	NA	NA
AUK96320.1\|1096843_1097632_-	ABC transporter	G3M9Y6	Bacillus_virus	1.1e-33	40.0
AUK96321.1\|1098757_1099192_-	thioesterase	NA	NA	NA	NA
AUK96322.1\|1099188_1100199_-	zinc-binding dehydrogenase	NA	NA	NA	NA
AUK96323.1\|1100242_1101169_-	hypothetical protein	NA	NA	NA	NA
AUK96324.1\|1101455_1101824_+	hypothetical protein	NA	NA	NA	NA
AUK96325.1\|1103034_1105461_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.2e-86	33.8
AUK96326.1\|1105509_1106202_+	hydrolase	A0A1D6Y7U0	Golden_Marseillevirus	4.7e-07	29.9
AUK96327.1\|1106274_1107474_+	aromatic amino acid aminotransferase	NA	NA	NA	NA
AUK96328.1\|1107491_1108397_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK96329.1\|1108512_1109442_+	acetylxylan esterase	NA	NA	NA	NA
AUK98798.1\|1109467_1110814_+	MFS transporter	NA	NA	NA	NA
AUK96330.1\|1110826_1111591_+	short-chain dehydrogenase	A0A0M4JSW6	Mollivirus	3.1e-12	26.5
AUK96331.1\|1111604_1112387_+	short-chain dehydrogenase	NA	NA	NA	NA
AUK96332.1\|1112579_1113530_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96333.1\|1113591_1114701_-	porin	NA	NA	NA	NA
AUK96334.1\|1115213_1116050_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	1.6e-33	33.3
AUK96335.1\|1116176_1117085_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK96336.1\|1117081_1118032_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96337.1\|1118417_1118960_+	hypothetical protein	NA	NA	NA	NA
AUK96338.1\|1119995_1120946_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96339.1\|1121187_1121556_+	hypothetical protein	NA	NA	NA	NA
AUK96340.1\|1121601_1122726_+	hypothetical protein	NA	NA	NA	NA
AUK98799.1\|1123860_1124601_-	oxidoreductase	NA	NA	NA	NA
AUK96341.1\|1124704_1125325_+	TetR family transcriptional regulator	NA	NA	NA	NA
AUK96342.1\|1125475_1126378_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

1143372 : 1192106

Planktothrix_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK96359.1\|1143372_1144323_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96360.1\|1144379_1145528_-	alcohol dehydrogenase	NA	NA	NA	NA
AUK96361.1\|1145608_1146511_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96362.1\|1147090_1147888_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK96363.1\|1147935_1148589_-	DL-methionine transporter permease subunit	NA	NA	NA	NA
AUK96364.1\|1148545_1149634_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.7e-32	36.4
AUK96365.1\|1149798_1152024_-	glycosyl hydrolase	NA	NA	NA	NA
AUK96366.1\|1154301_1155198_+	inositol monophosphatase	NA	NA	NA	NA
AUK96367.1\|1155318_1156269_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96368.1\|1156265_1157957_-	long-chain fatty acid--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	9.4e-33	28.1
AUK96369.1\|1158018_1159215_+	amidohydrolase	NA	NA	NA	NA
AUK96370.1\|1159228_1160107_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK96371.1\|1160213_1161260_+	hypothetical protein	NA	NA	NA	NA
AUK96372.1\|1161323_1161734_+	acyl-CoA thioesterase	NA	NA	NA	NA
AUK96373.1\|1161744_1163217_+	magnesium transporter	NA	NA	NA	NA
AUK96374.1\|1163411_1164275_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96375.1\|1164358_1165510_-	Rieske (2Fe-2S) protein	NA	NA	NA	NA
AUK96376.1\|1165657_1166668_-	hypothetical protein	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	3.6e-16	24.6
AUK96377.1\|1166838_1167804_-	MFS transporter	NA	NA	NA	NA
AUK98801.1\|1167978_1168809_+	IclR family transcriptional regulator	NA	NA	NA	NA
AUK96378.1\|1168895_1169162_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
AUK96379.1\|1169166_1170078_+	geranyl transferase	NA	NA	NA	NA
AUK96380.1\|1170127_1171990_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
AUK96381.1\|1172146_1172944_+	GTP cyclohydrolase	NA	NA	NA	NA
AUK96382.1\|1173163_1173544_+	30S ribosomal protein S6	NA	NA	NA	NA
AUK96383.1\|1173591_1173915_+	primosomal replication protein N	NA	NA	NA	NA
AUK96384.1\|1174007_1174280_+	30S ribosomal protein S18	NA	NA	NA	NA
AUK96385.1\|1174295_1174751_+	50S ribosomal protein L9	NA	NA	NA	NA
AUK96386.1\|1174867_1175704_+	hypothetical protein	NA	NA	NA	NA
AUK96387.1\|1175700_1177074_+	replicative DNA helicase	C7BGG1	Burkholderia_phage	4.0e-135	58.2
AUK96388.1\|1177094_1178063_-	bile acid:sodium symporter	NA	NA	NA	NA
AUK96389.1\|1178142_1179120_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
AUK96390.1\|1180982_1181447_-	peroxiredoxin	NA	NA	NA	NA
AUK96391.1\|1181449_1181902_-	hypothetical protein	NA	NA	NA	NA
AUK96392.1\|1182118_1183306_+	alanine transaminase	NA	NA	NA	NA
AUK96393.1\|1183302_1184607_+	homoserine dehydrogenase	NA	NA	NA	NA
AUK96394.1\|1184603_1186010_+	threonine synthase	NA	NA	NA	NA
AUK96395.1\|1186223_1186445_+	hypothetical protein	NA	NA	NA	NA
AUK96396.1\|1186652_1187603_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96397.1\|1187659_1188772_+	malate dehydrogenase	NA	NA	NA	NA
AUK96398.1\|1191155_1192106_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

1201752 : 1256568

uncultured_Mediterranean_phage(25.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK96410.1\|1201752_1202703_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96411.1\|1202870_1204262_+	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.4e-29	32.0
AUK96412.1\|1204334_1204913_+	superoxide dismutase	NA	NA	NA	NA
AUK96413.1\|1205029_1206427_+	chloride channel protein EriC	NA	NA	NA	NA
AUK96414.1\|1206542_1207748_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
AUK96415.1\|1207847_1208339_-	hypothetical protein	A0A1B1IUW8	uncultured_Mediterranean_phage	4.8e-14	42.2
AUK96416.1\|1208460_1208706_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-20	76.6
AUK96417.1\|1208933_1209248_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-10	43.8
AUK96418.1\|1216744_1219060_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.1e-164	41.9
AUK96419.1\|1219064_1220384_+	paraquat-inducible membrane protein A	NA	NA	NA	NA
AUK96420.1\|1220402_1222076_+	paraquat-inducible protein B	NA	NA	NA	NA
AUK96421.1\|1222080_1222749_+	hypothetical protein	NA	NA	NA	NA
AUK96422.1\|1222905_1226727_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
AUK96423.1\|1228028_1229174_+	branched chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK96424.1\|1229322_1230252_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUK96425.1\|1230248_1231337_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
AUK96426.1\|1231333_1232137_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.9e-14	23.5
AUK96427.1\|1232133_1232865_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-12	31.0
AUK96428.1\|1232922_1234212_-	MFS transporter	NA	NA	NA	NA
AUK96429.1\|1234308_1234911_+	TetR family transcriptional regulator	NA	NA	NA	NA
AUK98802.1\|1235854_1238134_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AUK96430.1\|1239462_1239801_-	transcriptional regulator	NA	NA	NA	NA
AUK96431.1\|1240508_1240775_+	hypothetical protein	NA	NA	NA	NA
AUK96432.1\|1242529_1243432_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96433.1\|1243428_1244760_-	arabinose ABC transporter permease	NA	NA	NA	NA
AUK98803.1\|1246020_1248021_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
AUK96434.1\|1248013_1248655_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
AUK96435.1\|1248651_1249059_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
AUK96436.1\|1249055_1249856_+	hypothetical protein	NA	NA	NA	NA
AUK96437.1\|1249930_1250635_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUK96438.1\|1250666_1251461_+	N-formylglutamate deformylase	NA	NA	NA	NA
AUK96439.1\|1251457_1252408_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96440.1\|1252506_1252941_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
AUK96441.1\|1253023_1255360_+	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.2e-124	42.8
AUK98804.1\|1255551_1256568_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

1405093 : 1471563

Planktothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK96561.1\|1405093_1406044_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96562.1\|1406142_1407093_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96563.1\|1407861_1408500_-	glutathione S-transferase	NA	NA	NA	NA
AUK98819.1\|1409389_1409836_+	glutamate racemase	NA	NA	NA	NA
AUK96564.1\|1409917_1410619_-	branched-chain amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-17	30.4
AUK96565.1\|1410619_1411387_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	A0A2H4PQG7	Staphylococcus_phage	1.2e-14	26.4
AUK96566.1\|1411383_1412622_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA
AUK96567.1\|1412621_1413548_-	branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA
AUK96568.1\|1413650_1414766_-	leucine ABC transporter subunit substrate-binding protein LivK	NA	NA	NA	NA
AUK96569.1\|1414781_1415732_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96570.1\|1416085_1416667_-	hypothetical protein	A0A2I7SAW6	Vibrio_phage	9.4e-17	37.3
AUK96571.1\|1416663_1417497_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
AUK98820.1\|1417707_1419021_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK96572.1\|1419197_1420079_+	glycerol-3-phosphate transporter permease	NA	NA	NA	NA
AUK96573.1\|1420098_1420950_+	glycerol-3-phosphate transporter	NA	NA	NA	NA
AUK96574.1\|1421002_1422091_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	2.2e-19	31.2
AUK96575.1\|1422201_1423329_-	leucine ABC transporter subunit substrate-binding protein LivK	NA	NA	NA	NA
AUK98821.1\|1423563_1424175_+	alpha/beta hydrolase	NA	NA	NA	NA
AUK96576.1\|1424320_1425223_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96577.1\|1425202_1425487_-	hypothetical protein	NA	NA	NA	NA
AUK96578.1\|1425444_1425822_-	hypothetical protein	NA	NA	NA	NA
AUK98822.1\|1425969_1426467_+	hypothetical protein	NA	NA	NA	NA
AUK96579.1\|1426463_1426991_+	hypothetical protein	NA	NA	NA	NA
AUK96580.1\|1427124_1427940_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK96581.1\|1427952_1429134_-	alpha-hydroxy-acid oxidizing enzyme	NA	NA	NA	NA
AUK96582.1\|1429181_1430075_-	phosphatidylserine decarboxylase	NA	NA	NA	NA
AUK98823.1\|1430201_1430672_-	hypothetical protein	NA	NA	NA	NA
AUK96583.1\|1430797_1431625_-	hypothetical protein	NA	NA	NA	NA
AUK96584.1\|1431653_1432430_-	lipoate--protein ligase	NA	NA	NA	NA
AUK98824.1\|1432426_1432702_-	biotin--protein ligase	NA	NA	NA	NA
AUK96585.1\|1432716_1433181_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUK96586.1\|1433192_1433894_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA
AUK96587.1\|1434003_1434504_-	glutathione peroxidase	Q6VZR0	Canarypox_virus	4.7e-25	38.4
AUK96588.1\|1434586_1435765_-	hypothetical protein	NA	NA	NA	NA
AUK98825.1\|1437399_1437726_+	hypothetical protein	NA	NA	NA	NA
AUK96589.1\|1437913_1439362_+	carnitine dehydratase	NA	NA	NA	NA
AUK96590.1\|1439419_1439764_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	3.0e-31	58.4
AUK96591.1\|1439870_1440410_-	peroxiredoxin	NA	NA	NA	NA
AUK96592.1\|1440502_1440943_-	hypothetical protein	NA	NA	NA	NA
AUK96593.1\|1441548_1442451_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96594.1\|1442596_1443004_-	hypothetical protein	NA	NA	NA	NA
AUK96595.1\|1443236_1443668_-	hypothetical protein	NA	NA	NA	NA
AUK96596.1\|1443849_1444254_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUK96597.1\|1445490_1445814_+	hypothetical protein	NA	NA	NA	NA
AUK96598.1\|1445816_1446704_-	aldo/keto reductase	NA	NA	NA	NA
AUK96599.1\|1446736_1447162_-	universal stress protein	NA	NA	NA	NA
AUK96600.1\|1447233_1447587_-	hypothetical protein	NA	NA	NA	NA
AUK96601.1\|1447826_1448333_-	hypothetical protein	NA	NA	NA	NA
AUK96602.1\|1448371_1449703_-	transcriptional regulator PtsJ	NA	NA	NA	NA
AUK96603.1\|1449762_1450578_+	YggS family pyridoxal phosphate enzyme	NA	NA	NA	NA
AUK96604.1\|1450574_1451429_+	bifunctional pyridoxal kinase/hydroxymethylpyrimidine kinase	NA	NA	NA	NA
AUK96605.1\|1457030_1457972_-	hypothetical protein	NA	NA	NA	NA
AUK96606.1\|1457956_1458340_-	hypothetical protein	NA	NA	NA	NA
AUK96607.1\|1458400_1460155_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA
AUK96608.1\|1460151_1462272_-	glycogen debranching enzyme GlgX	NA	NA	NA	NA
AUK96609.1\|1462276_1464472_-	1,4-alpha-glucan branching enzyme	NA	NA	NA	NA
AUK98826.1\|1464468_1467810_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA
AUK96610.1\|1467821_1469354_-	alpha-amylase	NA	NA	NA	NA
AUK96611.1\|1469347_1470490_-	hypothetical protein	NA	NA	NA	NA
AUK96612.1\|1470612_1471563_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1883151 : 1932212

Moraxella_phage(18.18%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK96942.1\|1883151_1884054_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96943.1\|1885248_1887849_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUK96944.1\|1887955_1888960_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK96945.1\|1889068_1890409_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	8.8e-18	22.8
AUK96946.1\|1890449_1891478_-	silent information regulator protein Sir2	NA	NA	NA	NA
AUK96947.1\|1891673_1892219_+	MarR family transcriptional regulator	NA	NA	NA	NA
AUK96948.1\|1892215_1892776_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA
AUK96949.1\|1892874_1893825_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96950.1\|1893971_1894874_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96951.1\|1894911_1895499_+	thymidylate synthase	A0A1X9I5T8	Streptococcus_phage	4.7e-16	35.8
AUK96952.1\|1895516_1895900_-	thiol reductase thioredoxin	V9SJ74	Achromobacter_phage	8.1e-09	25.8
AUK96953.1\|1897259_1898552_-	guanine permease	A0A0R6PHV4	Moraxella_phage	1.7e-66	36.0
AUK96954.1\|1898686_1899727_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.1e-91	51.3
AUK98860.1\|1899824_1900841_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUK96955.1\|1901108_1901744_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AUK96956.1\|1901881_1902640_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-68	51.2
AUK96957.1\|1902624_1903404_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.8e-32	46.9
AUK96958.1\|1903421_1904306_+	peptidase	A0A292GJG6	Xanthomonas_phage	4.6e-15	49.5
AUK96959.1\|1904302_1905082_+	3'-5' exonuclease	NA	NA	NA	NA
AUK96960.1\|1905186_1905786_+	hypothetical protein	NA	NA	NA	NA
AUK96961.1\|1906074_1906827_+	hypothetical protein	NA	NA	NA	NA
AUK96962.1\|1906945_1908346_+	23S rRNA (uracil(1939)-C(5))-methyltransferase	A0A2K5B251	Erysipelothrix_phage	7.3e-31	26.5
AUK96963.1\|1908369_1908768_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
AUK96964.1\|1908943_1909144_+	heavy metal transporter	NA	NA	NA	NA
AUK96965.1\|1909282_1910011_+	glutathione peroxidase	A0A1D8KSL1	Synechococcus_phage	9.6e-43	56.8
AUK96966.1\|1910144_1911560_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
AUK96967.1\|1911563_1912427_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
AUK96968.1\|1912439_1913189_-	glycerophosphodiester phosphodiesterase	A0A2H4PGQ5	Escherichia_phage	1.5e-14	27.8
AUK98861.1\|1913431_1915387_+	peptidylprolyl isomerase	NA	NA	NA	NA
AUK96969.1\|1915368_1916037_-	arylesterase	NA	NA	NA	NA
AUK96970.1\|1916858_1917761_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK96971.1\|1917909_1918248_-	phospholipid-binding protein	NA	NA	NA	NA
AUK96972.1\|1918305_1918467_-	DUF1328 domain-containing protein	NA	NA	NA	NA
AUK96973.1\|1918498_1918699_-	general stress protein CsbD	NA	NA	NA	NA
AUK96974.1\|1918964_1921538_-	cyanophycin synthetase	NA	NA	NA	NA
AUK96975.1\|1921608_1924158_-	cyanophycin synthetase	NA	NA	NA	NA
AUK96976.1\|1926726_1927197_+	hypothetical protein	NA	NA	NA	NA
AUK96977.1\|1927288_1928440_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUK96978.1\|1928493_1929315_+	hypothetical protein	NA	NA	NA	NA
AUK96979.1\|1929353_1930583_+	lytic transglycosylase	NA	NA	NA	NA
AUK96980.1\|1930711_1931152_+	hypothetical protein	NA	NA	NA	NA
AUK96981.1\|1931498_1932212_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

2117505 : 2154985

Erysipelothrix_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK97118.1\|2117505_2118408_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97119.1\|2119326_2120199_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUK97120.1\|2120276_2121416_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK97121.1\|2121774_2123031_+	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA
AUK97122.1\|2123036_2123564_+	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA
AUK97123.1\|2123568_2124387_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUK97124.1\|2124386_2125109_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUK97125.1\|2125130_2125445_+	2Fe-2S ferredoxin	NA	NA	NA	NA
AUK97126.1\|2125462_2126611_+	carnitine dehydratase	NA	NA	NA	NA
AUK97127.1\|2126641_2127517_-	esterase	NA	NA	NA	NA
AUK97128.1\|2127513_2128833_-	acyl--CoA ligase	NA	NA	NA	NA
AUK97129.1\|2128905_2130102_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AUK97130.1\|2130112_2131483_-	hypothetical protein	NA	NA	NA	NA
AUK97131.1\|2131840_2133667_-	DUF3604 domain-containing protein	NA	NA	NA	NA
AUK97132.1\|2134194_2135094_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK97133.1\|2135231_2136197_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK97134.1\|2136295_2137246_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97135.1\|2137467_2138418_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97136.1\|2138414_2138717_-	SelT/selW/selH domain protein	NA	NA	NA	NA
AUK97137.1\|2138876_2139281_+	preprotein translocase subunit TatC	NA	NA	NA	NA
AUK97138.1\|2139273_2140500_+	NnrS family protein	NA	NA	NA	NA
AUK97139.1\|2140496_2140943_+	hypothetical protein	NA	NA	NA	NA
AUK97140.1\|2141012_2141795_+	exodeoxyribonuclease III	NA	NA	NA	NA
AUK97141.1\|2141836_2143342_+	microcystin degradation protein MlrC	NA	NA	NA	NA
AUK98874.1\|2143627_2144422_-	oxidoreductase	NA	NA	NA	NA
AUK97142.1\|2144418_2144994_-	hypothetical protein	NA	NA	NA	NA
AUK97143.1\|2145072_2145867_-	hypothetical protein	NA	NA	NA	NA
AUK97144.1\|2145898_2146720_-	alpha/beta hydrolase	NA	NA	NA	NA
AUK97145.1\|2146738_2147593_-	polysaccharide deacetylase	NA	NA	NA	NA
AUK97146.1\|2147596_2148568_-	hypothetical protein	NA	NA	NA	NA
AUK97147.1\|2148642_2149281_-	hypothetical protein	NA	NA	NA	NA
AUK97148.1\|2149914_2150865_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97149.1\|2150851_2151856_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97150.1\|2152002_2152299_-	hypothetical protein	NA	NA	NA	NA
AUK97151.1\|2152473_2153826_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	2.9e-45	27.6
AUK98875.1\|2153968_2154985_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_11

2168191 : 2212511

Bacillus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK97163.1\|2168191_2169094_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98877.1\|2169216_2169696_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUK97164.1\|2169794_2170745_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97165.1\|2170828_2172646_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-37	27.4
AUK98878.1\|2172773_2173367_+	hypothetical protein	NA	NA	NA	NA
AUK97166.1\|2173379_2174309_-	hypothetical protein	NA	NA	NA	NA
AUK97167.1\|2174478_2174943_+	hypothetical protein	NA	NA	NA	NA
AUK97168.1\|2175190_2175871_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUK97169.1\|2175919_2177611_+	sodium-independent anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	5.0e-42	27.3
AUK97170.1\|2177626_2178178_-	ATPase	NA	NA	NA	NA
AUK97171.1\|2178174_2178546_-	transcriptional regulator	NA	NA	NA	NA
AUK97172.1\|2178658_2179495_+	alpha/beta hydrolase	NA	NA	NA	NA
AUK97173.1\|2179505_2179985_-	hypothetical protein	NA	NA	NA	NA
AUK97174.1\|2180127_2180307_+	DUF3008 domain-containing protein	NA	NA	NA	NA
AUK97175.1\|2180436_2181411_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUK97176.1\|2181541_2181898_+	RNA signal recognition particle	NA	NA	NA	NA
AUK98879.1\|2181887_2182763_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AUK97177.1\|2182861_2183746_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK97178.1\|2183767_2185063_-	hypothetical protein	NA	NA	NA	NA
AUK97179.1\|2186011_2186662_+	NAD(P)H dehydrogenase	NA	NA	NA	NA
AUK98880.1\|2186749_2188270_-	aldehyde dehydrogenase	NA	NA	NA	NA
AUK97180.1\|2188527_2190393_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AUK97181.1\|2190476_2191340_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97182.1\|2191438_2192341_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97183.1\|2192625_2193276_-	hypothetical protein	NA	NA	NA	NA
AUK97184.1\|2193361_2193721_-	CidA/LrgA family protein	NA	NA	NA	NA
AUK97185.1\|2193708_2195145_-	dethiobiotin synthase	NA	NA	NA	NA
AUK97186.1\|2195141_2195795_-	alpha/beta hydrolase	NA	NA	NA	NA
AUK97187.1\|2197087_2198362_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	9.6e-14	28.9
AUK97188.1\|2199473_2200448_+	hypothetical protein	NA	NA	NA	NA
AUK98881.1\|2200444_2200588_+	cytochrome oxidase maturation protein, cbb3-type	NA	NA	NA	NA
AUK97189.1\|2202209_2202872_+	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA
AUK97190.1\|2202874_2203051_+	cytochrome oxidase	NA	NA	NA	NA
AUK97191.1\|2203047_2203986_+	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA
AUK97192.1\|2204077_2205568_+	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA
AUK97193.1\|2205653_2205806_+	lipoprotein	NA	NA	NA	NA
AUK97194.1\|2205819_2206059_+	hypothetical protein	NA	NA	NA	NA
AUK97195.1\|2206154_2206898_+	permease	NA	NA	NA	NA
AUK98882.1\|2206930_2207431_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUK97196.1\|2207529_2208453_+	multidrug ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-23	33.6
AUK97197.1\|2208449_2209211_+	sugar ABC transporter permease	NA	NA	NA	NA
AUK98883.1\|2209226_2210309_-	AI-2E family transporter	NA	NA	NA	NA
AUK97198.1\|2210511_2211462_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97199.1\|2211560_2212511_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

2230767 : 2297161

Klosneuvirus(25.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK98885.1\|2230767_2232063_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
AUK97215.1\|2232112_2233399_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	NA	NA	NA	NA
AUK97216.1\|2233414_2233921_-	transcriptional regulator	NA	NA	NA	NA
AUK97217.1\|2233917_2235066_-	23S rRNA (adenine(2503)-C(2))-methyltransferase	NA	NA	NA	NA
AUK97218.1\|2235093_2235519_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.1e-21	43.2
AUK97219.1\|2235841_2238724_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.7e-138	37.1
AUK97220.1\|2238816_2239572_-	hypothetical protein	NA	NA	NA	NA
AUK97221.1\|2240337_2241687_+	two-component sensor histidine kinase	NA	NA	NA	NA
AUK97222.1\|2241833_2242736_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97223.1\|2242834_2243785_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97224.1\|2243858_2244332_+	hypothetical protein	NA	NA	NA	NA
AUK97225.1\|2244357_2245566_+	class V aminotransferase	NA	NA	NA	NA
AUK97226.1\|2245562_2246336_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AUK97227.1\|2246335_2246959_-	ribosome maturation factor RimM	NA	NA	NA	NA
AUK97228.1\|2247124_2247385_-	30S ribosomal protein S16	NA	NA	NA	NA
AUK97229.1\|2247688_2248270_+	hypothetical protein	NA	NA	NA	NA
AUK97230.1\|2248336_2248591_-	hypothetical protein	NA	NA	NA	NA
AUK97231.1\|2248577_2251202_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-81	39.4
AUK97232.1\|2251273_2252092_-	hypothetical protein	NA	NA	NA	NA
AUK97233.1\|2252088_2252694_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
AUK97234.1\|2252731_2253865_-	general secretion pathway protein	NA	NA	NA	NA
AUK98886.1\|2255580_2255955_-	hypothetical protein	NA	NA	NA	NA
AUK97235.1\|2256052_2257327_-	hypothetical protein	NA	NA	NA	NA
AUK97236.1\|2257330_2258908_-	hypothetical protein	NA	NA	NA	NA
AUK97237.1\|2259814_2261170_-	amidase	NA	NA	NA	NA
AUK97238.1\|2261166_2262801_-	microcin ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.2e-18	32.7
AUK98887.1\|2262793_2263714_-	peptide ABC transporter permease	NA	NA	NA	NA
AUK97239.1\|2263641_2264586_-	peptide ABC transporter	NA	NA	NA	NA
AUK97240.1\|2264638_2266213_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK97241.1\|2266260_2266626_-	hypothetical protein	NA	NA	NA	NA
AUK97242.1\|2268082_2269039_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK97243.1\|2269188_2270526_-	glycerol-3-phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK97244.1\|2270530_2271787_-	amino acid dehydrogenase	NA	NA	NA	NA
AUK97245.1\|2271982_2273029_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
AUK97246.1\|2273086_2273455_-	aspartate 1-decarboxylase	NA	NA	NA	NA
AUK97247.1\|2273585_2274458_-	MOSC domain-containing protein	NA	NA	NA	NA
AUK97248.1\|2274534_2275437_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUK97249.1\|2275441_2276497_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
AUK97250.1\|2276493_2277711_-	hypothetical protein	NA	NA	NA	NA
AUK97251.1\|2278984_2279887_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97252.1\|2280032_2280746_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97253.1\|2281182_2281992_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUK97254.1\|2282351_2283065_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97255.1\|2283061_2283955_-	methylglyoxal synthase	NA	NA	NA	NA
AUK97256.1\|2284079_2284274_-	Fe-S assembly protein IscX	NA	NA	NA	NA
AUK97257.1\|2284273_2284615_-	ferredoxin, 2Fe-2S type, ISC system	NA	NA	NA	NA
AUK97258.1\|2284624_2286487_-	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	3.0e-101	42.4
AUK97259.1\|2286616_2287129_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA
AUK97260.1\|2287131_2287455_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	6.8e-25	52.8
AUK97261.1\|2287456_2287867_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	7.5e-53	79.0
AUK97262.1\|2287904_2289116_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA
AUK97263.1\|2289133_2289646_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA
AUK97264.1\|2289861_2290353_-	protein tyrosine phosphatase	NA	NA	NA	NA
AUK97265.1\|2290605_2292642_-	excinuclease ABC subunit B	NA	NA	NA	NA
AUK97266.1\|2292719_2293922_+	aromatic amino acid aminotransferase	NA	NA	NA	NA
AUK97267.1\|2294050_2294701_+	repressor LexA	A0A2H4JG58	uncultured_Caudovirales_phage	3.3e-10	50.7
AUK97268.1\|2294927_2295857_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AUK97269.1\|2295902_2296262_+	hypothetical protein	NA	NA	NA	NA
AUK97270.1\|2296258_2297161_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

2430550 : 2496414

Pandoravirus(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK98895.1\|2430550_2431000_-\|tRNA	tRNA-specific adenosine deaminase	S4VYT2	Pandoravirus	2.0e-06	38.2
AUK97364.1\|2431049_2431898_-	hydrolase	NA	NA	NA	NA
AUK97365.1\|2431995_2432538_-	hypothetical protein	NA	NA	NA	NA
AUK97366.1\|2432581_2433532_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97367.1\|2433687_2434014_-	cation:proton antiporter	NA	NA	NA	NA
AUK97368.1\|2434010_2434292_-	K+/H+ antiporter subunit F	NA	NA	NA	NA
AUK97369.1\|2434291_2434768_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA
AUK97370.1\|2434767_2436396_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA
AUK97371.1\|2436392_2436737_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA
AUK97372.1\|2436736_2439670_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA
AUK97373.1\|2441876_2442173_-	hypothetical protein	NA	NA	NA	NA
AUK97374.1\|2442279_2443197_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK97375.1\|2443201_2443915_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA
AUK97376.1\|2443928_2444900_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK97377.1\|2445003_2446416_+	hypothetical protein	NA	NA	NA	NA
AUK97378.1\|2446649_2447000_+	transcriptional regulator	NA	NA	NA	NA
AUK97379.1\|2447003_2448191_+	hypothetical protein	NA	NA	NA	NA
AUK98896.1\|2448629_2449352_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-87	68.2
AUK97380.1\|2449348_2449537_-	hypothetical protein	NA	NA	NA	NA
AUK97381.1\|2449645_2450596_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97382.1\|2450592_2451021_-	hypothetical protein	NA	NA	NA	NA
AUK98897.1\|2452422_2453385_-	hypothetical protein	NA	NA	NA	NA
AUK97383.1\|2453500_2454454_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK97384.1\|2454463_2455456_-	MFS transporter	NA	NA	NA	NA
AUK97385.1\|2455507_2456263_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUK97386.1\|2456327_2457017_-	short-chain dehydrogenase	NA	NA	NA	NA
AUK97387.1\|2457238_2458189_+	hydrolase	NA	NA	NA	NA
AUK97388.1\|2458219_2459416_+	alpha-hydroxy-acid oxidizing enzyme	NA	NA	NA	NA
AUK97389.1\|2459406_2460186_+	short-chain dehydrogenase	NA	NA	NA	NA
AUK97390.1\|2460298_2461225_+	hypothetical protein	NA	NA	NA	NA
AUK97391.1\|2461442_2462255_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK97392.1\|2462232_2463102_-	2,4-dichlorophenoxyacetate dioxygenase	NA	NA	NA	NA
AUK98898.1\|2463345_2463969_+	glutathione S-transferase	NA	NA	NA	NA
AUK97393.1\|2464283_2464583_+	transcriptional regulator	NA	NA	NA	NA
AUK97394.1\|2467796_2468471_+	DNA-binding response regulator	NA	NA	NA	NA
AUK97395.1\|2468463_2470278_+	histidine kinase	NA	NA	NA	NA
AUK97396.1\|2470331_2471279_-	hypothetical protein	NA	NA	NA	NA
AUK97397.1\|2471431_2472334_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97398.1\|2472313_2472793_-	hypothetical protein	NA	NA	NA	NA
AUK97399.1\|2472886_2474512_-	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	2.0e-149	52.2
AUK98900.1\|2474561_2475596_-	haloacid dehalogenase	NA	NA	NA	NA
AUK97400.1\|2475598_2476945_-	hypothetical protein	NA	NA	NA	NA
AUK98901.1\|2476941_2478456_-	hypothetical protein	NA	NA	NA	NA
AUK98899.1\|2478446_2479457_-	hypothetical protein	NA	NA	NA	NA
AUK97401.1\|2479930_2480872_-	MoxR protein	NA	NA	NA	NA
AUK97402.1\|2480880_2481849_-	AAA family ATPase	NA	NA	NA	NA
AUK97403.1\|2483388_2484357_+	phenol degradation protein meta	NA	NA	NA	NA
AUK97404.1\|2484522_2485524_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK97405.1\|2485570_2486329_+	short-chain dehydrogenase	NA	NA	NA	NA
AUK97406.1\|2486518_2487256_+	hypothetical protein	A0A0S4KZH7	Pseudomonas_phage	4.1e-41	46.6
AUK97407.1\|2487354_2488305_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97408.1\|2488489_2489272_+	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	A0A2R8FG22	Brazilian_cedratvirus	2.0e-09	25.8
AUK97409.1\|2489265_2489967_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
AUK97410.1\|2490206_2490809_+	TetR family transcriptional regulator	NA	NA	NA	NA
AUK97411.1\|2492135_2493086_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97412.1\|2493082_2494639_-	capsular biosynthesis protein	NA	NA	NA	NA
AUK97413.1\|2494631_2495405_-	short-chain dehydrogenase	NA	NA	NA	NA
AUK97414.1\|2495463_2496414_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_14

2532410 : 2599838

Ectocarpus_siliculosus_virus(11.11%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK97436.1\|2532410_2533313_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97437.1\|2533332_2534238_-	hypothetical protein	NA	NA	NA	NA
AUK97438.1\|2534315_2535014_-	quercetin 2,3-dioxygenase	NA	NA	NA	NA
AUK97439.1\|2535173_2536118_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK97440.1\|2536127_2537615_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA
AUK97441.1\|2537614_2538682_-	PAS domain-containing sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	1.1e-05	23.5
AUK97442.1\|2538745_2540158_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
AUK97443.1\|2540343_2541564_-	YggW family oxidoreductase	NA	NA	NA	NA
AUK98905.1\|2542633_2543275_-	non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family	NA	NA	NA	NA
AUK97444.1\|2543401_2545204_+	GGDEF domain-containing protein	NA	NA	NA	NA
AUK97445.1\|2545304_2546258_+	hypothetical protein	NA	NA	NA	NA
AUK97446.1\|2546453_2546789_+	hypothetical protein	NA	NA	NA	NA
AUK97447.1\|2546855_2547761_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK97448.1\|2547942_2549319_+	2-methylcitrate dehydratase	NA	NA	NA	NA
AUK97449.1\|2549485_2550226_-	ribonuclease PH	NA	NA	NA	NA
AUK97450.1\|2550362_2551289_+	YicC family protein	NA	NA	NA	NA
AUK97451.1\|2551561_2551717_+	hypothetical protein	NA	NA	NA	NA
AUK97452.1\|2551729_2551858_+	hypothetical protein	NA	NA	NA	NA
AUK97453.1\|2551854_2552139_+	transcriptional regulator	NA	NA	NA	NA
AUK97454.1\|2552197_2553688_-	AMP nucleosidase	NA	NA	NA	NA
AUK97455.1\|2553932_2554532_+	NlpC/P60 family protein 2	A0A0A8WF62	Clostridium_phage	1.4e-20	41.6
AUK97456.1\|2554536_2555307_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUK97457.1\|2555544_2556258_+	cytochrome C	NA	NA	NA	NA
AUK97458.1\|2556254_2557172_+	cytochrome C	NA	NA	NA	NA
AUK98906.1\|2557334_2557940_+	guanylate kinase	U5J9X2	Bacillus_phage	2.0e-09	29.6
AUK97459.1\|2557981_2558185_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
AUK97460.1\|2558209_2560489_+	guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	5.9e-06	32.1
AUK97461.1\|2560501_2561230_-	glutamine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-35	39.3
AUK97462.1\|2561226_2561886_-	glutamine ABC transporter permease GlnP	NA	NA	NA	NA
AUK97463.1\|2561954_2562707_-	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA
AUK97464.1\|2562888_2563791_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97465.1\|2564731_2565637_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
AUK97466.1\|2565654_2566776_+	hypothetical protein	NA	NA	NA	NA
AUK97467.1\|2566864_2567479_-	fimbrial protein	NA	NA	NA	NA
AUK97468.1\|2568136_2569324_-	cupin	NA	NA	NA	NA
AUK98907.1\|2569320_2571918_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	1.5e-21	22.6
AUK97469.1\|2572172_2572388_+	hypothetical protein	NA	NA	NA	NA
AUK97470.1\|2572843_2573398_-	NADPH-dependent FMN reductase	A0A2P0ZL82	Lactobacillus_phage	1.7e-15	32.0
AUK98908.1\|2573668_2574226_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AUK97471.1\|2574337_2575642_+	peptidase	NA	NA	NA	NA
AUK97472.1\|2575638_2577150_+	thiol oxidoreductase	NA	NA	NA	NA
AUK97473.1\|2577255_2578257_+	aminopeptidase	NA	NA	NA	NA
AUK97474.1\|2578246_2579359_+	Tat pathway signal protein	NA	NA	NA	NA
AUK97475.1\|2579504_2580407_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97476.1\|2580403_2581030_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
AUK97477.1\|2581089_2581941_+	hypothetical protein	A0A1I9SA48	Rhodococcus_phage	7.0e-37	35.3
AUK98909.1\|2582107_2582644_+	hypothetical protein	NA	NA	NA	NA
AUK97478.1\|2582640_2583405_+	DUF1828 domain-containing protein	NA	NA	NA	NA
AUK97479.1\|2583474_2584425_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97480.1\|2584523_2585132_-	recombination protein RecR	NA	NA	NA	NA
AUK97481.1\|2585182_2585509_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
AUK98910.1\|2585555_2587646_-	DNA polymerase III, subunit gamma and tau	A0A1U9WR94	Streptococcus_virus	1.1e-43	38.5
AUK97482.1\|2588448_2591853_-	nuclease	NA	NA	NA	NA
AUK97483.1\|2591865_2594526_-	hypothetical protein	NA	NA	NA	NA
AUK97484.1\|2594729_2595932_-	MFS transporter	NA	NA	NA	NA
AUK97485.1\|2596618_2597731_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
AUK97486.1\|2597737_2598640_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97487.1\|2598785_2599154_-	aryl-sulfate sulfotransferase	NA	NA	NA	NA
AUK97488.1\|2599259_2599838_-\|protease	protease	NA	NA	NA	NA

DBSCAN-SWA_15

2626732 : 2677900

Salmonella_phage(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK97517.1\|2626732_2627683_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97518.1\|2627780_2628551_-	ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA	G9BWD6	Planktothrix_phage	8.3e-29	39.5
AUK97519.1\|2628547_2629219_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA
AUK97520.1\|2629215_2629857_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA
AUK97521.1\|2629869_2630790_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA
AUK97522.1\|2630950_2632111_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK97523.1\|2632152_2633103_-	ornithine cyclodeaminase	NA	NA	NA	NA
AUK97524.1\|2633701_2633926_+	hypothetical protein	NA	NA	NA	NA
AUK97525.1\|2634090_2635785_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
AUK97526.1\|2635906_2636176_-	phosphocarrier protein HPr	NA	NA	NA	NA
AUK97527.1\|2636291_2636690_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA
AUK97528.1\|2636700_2637657_-	glutathione synthase	NA	NA	NA	NA
AUK97529.1\|2637793_2638339_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	9.1e-14	29.9
AUK97530.1\|2638359_2640309_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	4.1e-125	36.0
AUK97531.1\|2640696_2641473_+	DNA-binding response regulator	NA	NA	NA	NA
AUK97532.1\|2641478_2641871_+	hypothetical protein	NA	NA	NA	NA
AUK97533.1\|2641867_2642275_-	hypothetical protein	NA	NA	NA	NA
AUK97534.1\|2642340_2643243_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97535.1\|2643239_2644337_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	3.5e-20	37.3
AUK97536.1\|2644368_2645271_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97537.1\|2647099_2648341_-	hypothetical protein	NA	NA	NA	NA
AUK97538.1\|2648352_2649126_-	peroxide stress protein YaaA	NA	NA	NA	NA
AUK97539.1\|2649152_2650055_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97540.1\|2650201_2650984_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
AUK97541.1\|2651072_2652299_-	transporter	NA	NA	NA	NA
AUK97542.1\|2653024_2654410_+	alcaligin biosynthesis protein	NA	NA	NA	NA
AUK97543.1\|2654428_2655034_+	siderophore biosynthesis protein	NA	NA	NA	NA
AUK97544.1\|2655030_2656887_+	IucA/IucC family protein	NA	NA	NA	NA
AUK97545.1\|2656883_2657684_+	siderophore ferric iron reductase	NA	NA	NA	NA
AUK97546.1\|2657698_2658892_+	Rieske (2Fe-2S) protein	NA	NA	NA	NA
AUK97547.1\|2658959_2659934_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUK97548.1\|2660056_2661280_+	multidrug transporter	S4TR35	Salmonella_phage	9.8e-24	29.4
AUK97549.1\|2661390_2663595_+	porin	NA	NA	NA	NA
AUK97550.1\|2663889_2664549_+	antibiotic resistance protein	NA	NA	NA	NA
AUK97551.1\|2664556_2664763_-	hypothetical protein	NA	NA	NA	NA
AUK97552.1\|2665101_2665857_+	GGDEF domain-containing protein	NA	NA	NA	NA
AUK97553.1\|2665872_2666034_-	hypothetical protein	NA	NA	NA	NA
AUK97554.1\|2666127_2666643_+	hypothetical protein	T1SAR8	Salmonella_phage	5.1e-06	44.6
AUK97555.1\|2666915_2667233_+	virulence factor	NA	NA	NA	NA
AUK97556.1\|2667420_2667657_-	hypothetical protein	NA	NA	NA	NA
AUK97557.1\|2667947_2669303_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-83	47.5
AUK97558.1\|2669349_2670690_-	recombination factor protein RarA	G3MBE0	Bacillus_virus	1.6e-75	38.9
AUK97559.1\|2670791_2671424_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AUK97560.1\|2671423_2673793_-	cell division protein FtsK	S5VNE3	Mycobacterium_phage	7.6e-81	48.0
AUK97561.1\|2673825_2674785_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.1e-57	40.2
AUK97562.1\|2674771_2675458_+	DNA mismatch repair protein MutS	NA	NA	NA	NA
AUK97563.1\|2675454_2675787_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA
AUK97564.1\|2675950_2676853_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97565.1\|2677186_2677900_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

2878475 : 2957047

Moraxella_phage(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK97736.1\|2878475_2879378_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97737.1\|2879374_2887036_-	adhesin	A0A0R6PJK4	Moraxella_phage	7.3e-24	30.9
AUK97738.1\|2887276_2891323_-	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	6.3e-160	67.4
AUK97739.1\|2891680_2892217_+	TRAP transporter small permease protein	NA	NA	NA	NA
AUK97740.1\|2892213_2893512_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUK97741.1\|2893591_2894620_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUK97742.1\|2895826_2896777_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97743.1\|2896863_2897766_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98925.1\|2898072_2899005_+	succinylglutamate desuccinylase	NA	NA	NA	NA
AUK98926.1\|2899088_2899442_+	hypothetical protein	NA	NA	NA	NA
AUK97744.1\|2899519_2900128_-	hypothetical protein	NA	NA	NA	NA
AUK97745.1\|2901801_2902380_-	hypothetical protein	NA	NA	NA	NA
AUK97746.1\|2902404_2903358_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK97747.1\|2903397_2904315_-	oxidoreductase	NA	NA	NA	NA
AUK97748.1\|2904436_2905363_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK97749.1\|2905370_2906117_-	hypothetical protein	NA	NA	NA	NA
AUK98927.1\|2906443_2907385_+	LD-carboxypeptidase	NA	NA	NA	NA
AUK97750.1\|2907460_2907583_-	hypothetical protein	NA	NA	NA	NA
AUK97751.1\|2907611_2909309_-	sodium:proline symporter	NA	NA	NA	NA
AUK97752.1\|2909743_2911165_-	MFS transporter	NA	NA	NA	NA
AUK97753.1\|2911318_2912098_-	short-chain dehydrogenase	NA	NA	NA	NA
AUK97754.1\|2912222_2913101_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK97755.1\|2913206_2914331_+	racemase	Q6A202	Oenococcus_phage	1.5e-31	28.3
AUK97756.1\|2914376_2915339_+	hypothetical protein	NA	NA	NA	NA
AUK97757.1\|2915331_2916186_+	2-pyrone-4,6-dicarboxylate hydrolase	NA	NA	NA	NA
AUK97758.1\|2916293_2916704_+	lactoylglutathione lyase	NA	NA	NA	NA
AUK97759.1\|2916700_2917603_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97760.1\|2917748_2918630_-	phenazine biosynthesis protein PhzC/PhzF	NA	NA	NA	NA
AUK97761.1\|2918707_2920087_-	hypothetical protein	NA	NA	NA	NA
AUK97762.1\|2920125_2920971_-	FTR1 family iron permease	NA	NA	NA	NA
AUK98928.1\|2920986_2921301_-	periplasmic lipoprotein involved in iron transport	NA	NA	NA	NA
AUK97763.1\|2921333_2921870_-	hypothetical protein	NA	NA	NA	NA
AUK97764.1\|2922042_2922618_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA
AUK97765.1\|2922720_2923458_-	beta-ketoacyl-ACP reductase	NA	NA	NA	NA
AUK97766.1\|2923525_2925163_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA
AUK97767.1\|2925270_2926026_-	hypothetical protein	NA	NA	NA	NA
AUK97768.1\|2926013_2926976_-	RNA pseudouridine synthase	NA	NA	NA	NA
AUK98929.1\|2927083_2927878_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AUK97769.1\|2927939_2930015_-	helicase	A0A127AW80	Bacillus_phage	2.4e-75	30.0
AUK97770.1\|2930179_2932555_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
AUK97771.1\|2932635_2933991_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AUK97772.1\|2934135_2934954_-	hypothetical protein	NA	NA	NA	NA
AUK97773.1\|2935469_2936192_+	short-chain dehydrogenase	NA	NA	NA	NA
AUK97774.1\|2936246_2937230_+	LacI family transcriptional regulator	NA	NA	NA	NA
AUK97775.1\|2937359_2938310_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97776.1\|2938306_2939209_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK97777.1\|2939296_2940055_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUK97778.1\|2940067_2941159_-	cell division protein ZapE	NA	NA	NA	NA
AUK97779.1\|2941256_2942684_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-41	28.1
AUK97780.1\|2942913_2944128_-	dihydrolipoamide succinyltransferase	NA	NA	NA	NA
AUK97781.1\|2944173_2947044_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
AUK97782.1\|2947368_2947578_-	hypothetical protein	NA	NA	NA	NA
AUK97783.1\|2947556_2949419_-	oligopeptide transporter, OPT family	NA	NA	NA	NA
AUK97784.1\|2949454_2949943_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AUK97785.1\|2950068_2952765_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
AUK97786.1\|2952919_2955202_+	NADP-dependent malic enzyme	NA	NA	NA	NA
AUK97787.1\|2955374_2955998_+	fimbrial protein	NA	NA	NA	NA
AUK97788.1\|2956144_2957047_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_17

2978965 : 3045807

uncultured_Mediterranean_phage(25.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK97800.1\|2978965_2980486_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	1.2e-82	36.0
AUK97801.1\|2980528_2980831_+	hypothetical protein	NA	NA	NA	NA
AUK97802.1\|2980827_2981460_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUK97803.1\|2981538_2983404_-	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	9.3e-50	23.3
AUK97804.1\|2983400_2984216_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.5e-12	23.7
AUK97805.1\|2984223_2985339_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK97806.1\|2985749_2985992_+	hypothetical protein	NA	NA	NA	NA
AUK97807.1\|2986243_2987122_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUK97808.1\|2987121_2987946_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.0e-08	22.7
AUK97809.1\|2989275_2992125_+	diguanylate phosphodiesterase	NA	NA	NA	NA
AUK97810.1\|2992106_2992835_-	hypothetical protein	NA	NA	NA	NA
AUK97811.1\|2992975_2994439_-	hypothetical protein	A0A075BSJ0	Microcystis_phage	1.7e-43	32.5
AUK97812.1\|2994435_2994807_-	hypothetical protein	NA	NA	NA	NA
AUK97813.1\|2994824_2996138_+	hypothetical protein	NA	NA	NA	NA
AUK97814.1\|2996174_2996633_+	hypothetical protein	NA	NA	NA	NA
AUK97815.1\|2996744_2997695_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97816.1\|2997691_2998669_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AUK97817.1\|2999873_3000674_+	hypothetical protein	NA	NA	NA	NA
AUK97818.1\|3001476_3002379_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97819.1\|3002577_3003180_-	hypothetical protein	NA	NA	NA	NA
AUK97820.1\|3003198_3003831_+	rRNA methyltransferase	NA	NA	NA	NA
AUK97821.1\|3004068_3005955_+	cell division protein FtsH	M4QMW8	Micromonas_pusilla_virus	1.4e-109	41.5
AUK97822.1\|3005973_3006816_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-26	32.5
AUK97823.1\|3006812_3008171_+	phosphoglucosamine mutase	NA	NA	NA	NA
AUK97824.1\|3008391_3009186_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUK97825.1\|3009416_3010910_-	exopolyphosphatase	NA	NA	NA	NA
AUK97826.1\|3011145_3013227_+	RNA degradosome polyphosphate kinase	NA	NA	NA	NA
AUK97827.1\|3013421_3014462_+	phosphate ABC transporter substrate-binding protein PstS	M4QHS4	Cyanophage	2.1e-51	40.2
AUK97828.1\|3014596_3015613_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
AUK97829.1\|3015655_3016492_+	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA
AUK98932.1\|3016536_3017313_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-17	28.7
AUK97830.1\|3017680_3018631_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97831.1\|3018657_3019122_-	barstar family protein 2	NA	NA	NA	NA
AUK97832.1\|3020328_3022617_-	NADP-dependent malic enzyme	NA	NA	NA	NA
AUK97833.1\|3022733_3023606_-	hypothetical protein	NA	NA	NA	NA
AUK97834.1\|3023648_3024803_+	aminotransferase	NA	NA	NA	NA
AUK97835.1\|3024837_3025668_-	lytic transglycosylase	NA	NA	NA	NA
AUK97836.1\|3025751_3027296_+	3-octaprenyl-4-hydroxybenzoate decarboxylase	NA	NA	NA	NA
AUK97837.1\|3027338_3027698_-	hypothetical protein	NA	NA	NA	NA
AUK97838.1\|3027699_3028113_-	hypothetical protein	NA	NA	NA	NA
AUK97839.1\|3028153_3028471_-	hypothetical protein	NA	NA	NA	NA
AUK98933.1\|3028555_3029269_-	hypothetical protein	NA	NA	NA	NA
AUK98934.1\|3029535_3030957_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
AUK97840.1\|3032159_3033110_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98935.1\|3035152_3036169_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUK98936.1\|3036504_3037146_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
AUK97841.1\|3037236_3038673_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
AUK97842.1\|3038830_3039904_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
AUK97843.1\|3039900_3041037_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.9e-85	44.4
AUK97844.1\|3041181_3041526_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.0e-10	40.4
AUK97845.1\|3041592_3043473_+	protein-export membrane protein SecD	NA	NA	NA	NA
AUK97846.1\|3043522_3044458_+	protein-export membrane protein SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.0e-41	35.5
AUK98937.1\|3044790_3045807_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

3114046 : 3252782

120

Bacillus_virus(11.76%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK98944.1\|3114046_3115063_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUK97894.1\|3115200_3116250_-	aldo/keto reductase	NA	NA	NA	NA
AUK97895.1\|3116402_3117305_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97896.1\|3117400_3118087_-	coenzyme A pyrophosphatase	NA	NA	NA	NA
AUK97897.1\|3118336_3118717_-	50S ribosomal protein L19	NA	NA	NA	NA
AUK97898.1\|3119022_3119895_+	multidrug DMT transporter permease	NA	NA	NA	NA
AUK97899.1\|3119902_3120283_-	hypothetical protein	NA	NA	NA	NA
AUK97900.1\|3120436_3121711_-	radical SAM protein	NA	NA	NA	NA
AUK98945.1\|3123198_3124107_-	sulfate adenylyltransferase small subunit	NA	NA	NA	NA
AUK97901.1\|3124904_3125969_-	sulfate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.8e-24	30.3
AUK97902.1\|3125993_3126776_-	sulfate ABC transporter permease subunit CysW	NA	NA	NA	NA
AUK97903.1\|3126890_3127565_-	sulfate ABC transporter permease subunit CysT	NA	NA	NA	NA
AUK97904.1\|3127586_3127790_-	hypothetical protein	NA	NA	NA	NA
AUK97905.1\|3127805_3128840_-	sulfate transporter subunit	NA	NA	NA	NA
AUK97906.1\|3129029_3129671_-	peroxidase	NA	NA	NA	NA
AUK97907.1\|3129753_3131580_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUK97908.1\|3131823_3132753_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA
AUK97909.1\|3132752_3133502_-	electron transporter RnfB	NA	NA	NA	NA
AUK97910.1\|3133573_3134488_-	deacetylase	A0A2K9KZC4	Tupanvirus	9.8e-45	34.7
AUK97911.1\|3134507_3135653_+	lytic murein transglycosylase B	NA	NA	NA	NA
AUK97912.1\|3135713_3136625_-	cysteine synthase B	A0A1X9I5K7	Streptococcus_phage	8.0e-47	38.8
AUK97913.1\|3136705_3137656_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97914.1\|3138372_3139362_-	ADP-glyceromanno-heptose 6-epimerase	E3SJ87	Synechococcus_phage	2.2e-26	34.4
AUK97915.1\|3139358_3140300_-	hypothetical protein	A0A2H4N7X4	Lake_Baikal_phage	1.5e-16	28.1
AUK97916.1\|3140296_3141517_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
AUK97917.1\|3141559_3141874_-	hypothetical protein	NA	NA	NA	NA
AUK97918.1\|3142065_3142425_-	integration host factor subunit beta	NA	NA	NA	NA
AUK97919.1\|3142426_3144142_-	30S ribosomal protein S1	NA	NA	NA	NA
AUK97920.1\|3144329_3145001_-	cytidylate kinase	NA	NA	NA	NA
AUK97921.1\|3145015_3146344_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AUK97922.1\|3146340_3147240_-	prephenate dehydrogenase	NA	NA	NA	NA
AUK97923.1\|3147326_3148412_-	chorismate mutase	NA	NA	NA	NA
AUK98946.1\|3148404_3149535_-	phosphoserine transaminase	M1Q1P2	Streptococcus_phage	4.9e-78	44.0
AUK97924.1\|3149537_3152219_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.2e-104	33.5
AUK97925.1\|3152589_3153171_+	hypothetical protein	NA	NA	NA	NA
AUK97926.1\|3153296_3154022_+	bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase	NA	NA	NA	NA
AUK97927.1\|3154018_3154696_+	phosphoglycolate phosphatase	NA	NA	NA	NA
AUK97928.1\|3154911_3156093_+	MFS transporter	NA	NA	NA	NA
AUK97929.1\|3156865_3157048_+	addiction module toxin, HicA family	A0A1L2JY37	Aeribacillus_phage	3.7e-12	56.1
AUK97930.1\|3157077_3158028_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98947.1\|3158157_3158550_+	hypothetical protein	A0A0R6PJ17	Moraxella_phage	4.8e-25	45.0
AUK97931.1\|3158826_3159717_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	4.3e-05	27.6
AUK97932.1\|3159862_3160837_+	hypothetical protein	NA	NA	NA	NA
AUK97933.1\|3160833_3161736_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97934.1\|3161882_3162968_-	DNA polymerase IV	NA	NA	NA	NA
AUK97935.1\|3163065_3163476_+	phenylacetic acid degradation protein	NA	NA	NA	NA
AUK97936.1\|3164091_3166005_+	S9 family peptidase	NA	NA	NA	NA
AUK97937.1\|3166140_3168753_+	penicillin-binding protein	NA	NA	NA	NA
AUK97938.1\|3168754_3169489_-	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.9e-62	49.2
AUK97939.1\|3169652_3170834_+	hypothetical protein	NA	NA	NA	NA
AUK97940.1\|3170830_3171043_+	hypothetical protein	NA	NA	NA	NA
AUK97941.1\|3171039_3172020_-	alcohol dehydrogenase	NA	NA	NA	NA
AUK98948.1\|3172065_3172893_-	oxidoreductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-67	47.4
AUK98949.1\|3173042_3174857_+	metal ABC transporter permease	W8CYL7	Bacillus_phage	5.7e-44	27.9
AUK97942.1\|3174911_3175295_+	Rieske (2Fe-2S) protein	NA	NA	NA	NA
AUK97943.1\|3175291_3176194_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97944.1\|3176354_3176606_-	hypothetical protein	NA	NA	NA	NA
AUK97945.1\|3176799_3177015_-	hypothetical protein	NA	NA	NA	NA
AUK97946.1\|3177111_3178230_-	N-acylglucosamine 2-epimerase	NA	NA	NA	NA
AUK97947.1\|3178349_3178562_-	hypothetical protein	NA	NA	NA	NA
AUK97948.1\|3178721_3178931_-	hypothetical protein	NA	NA	NA	NA
AUK97949.1\|3178995_3179946_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97950.1\|3181122_3182493_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AUK97951.1\|3182525_3183317_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUK97952.1\|3183329_3184385_-	hypothetical protein	NA	NA	NA	NA
AUK97953.1\|3184410_3185286_-	hypothetical protein	NA	NA	NA	NA
AUK97954.1\|3185391_3185640_-	hypothetical protein	NA	NA	NA	NA
AUK97955.1\|3185674_3187129_-	carboxylase	NA	NA	NA	NA
AUK97956.1\|3187125_3187647_-	acetyl-CoA carboxylase, biotin carboxyl carrier protein	NA	NA	NA	NA
AUK97957.1\|3187675_3189028_-	hypothetical protein	NA	NA	NA	NA
AUK97958.1\|3189251_3192140_-	metal-dependent phosphohydrolase	NA	NA	NA	NA
AUK97959.1\|3194284_3195586_+	phospholipase	NA	NA	NA	NA
AUK97960.1\|3195600_3196317_-	flagellar brake protein	NA	NA	NA	NA
AUK97961.1\|3196598_3197279_+	hypothetical protein	NA	NA	NA	NA
AUK97962.1\|3197290_3197458_-	hypothetical protein	NA	NA	NA	NA
AUK97963.1\|3197806_3198466_-	thiopurine S-methyltransferase	NA	NA	NA	NA
AUK98950.1\|3198864_3200697_+	multidrug ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-27	26.4
AUK97964.1\|3200693_3201644_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97965.1\|3201724_3202336_-	hypothetical protein	NA	NA	NA	NA
AUK97966.1\|3202806_3204522_+	acetolactate synthase, large subunit, biosynthetic type	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	3.1e-60	30.3
AUK97967.1\|3204532_3205024_+	acetolactate synthase small subunit	NA	NA	NA	NA
AUK97968.1\|3205096_3206113_+	ketol-acid reductoisomerase	NA	NA	NA	NA
AUK97969.1\|3206280_3207060_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AUK98951.1\|3207078_3207606_-	hypothetical protein	NA	NA	NA	NA
AUK97970.1\|3207899_3208169_+	30S ribosomal protein S15	NA	NA	NA	NA
AUK97971.1\|3208259_3210419_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
AUK97972.1\|3210539_3211259_+	hypothetical protein	NA	NA	NA	NA
AUK97973.1\|3211255_3212206_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK97974.1\|3212346_3213564_+	threonine ammonia-lyase	NA	NA	NA	NA
AUK97975.1\|3213557_3214169_-	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	3.3e-12	32.5
AUK97976.1\|3214802_3215780_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
AUK97977.1\|3215923_3216670_+	triose-phosphate isomerase	NA	NA	NA	NA
AUK97978.1\|3216691_3217138_+	preprotein translocase subunit SecG	NA	NA	NA	NA
AUK97979.1\|3217925_3220157_+\|holin	high-affinity choline transporter BetT	NA	NA	NA	NA
AUK97980.1\|3220179_3220980_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUK97981.1\|3221261_3222494_+	methylaspartate ammonia-lyase	NA	NA	NA	NA
AUK97982.1\|3222604_3223594_+	hypothetical protein	NA	NA	NA	NA
AUK97983.1\|3223624_3225013_+	hypothetical protein	NA	NA	NA	NA
AUK97984.1\|3225060_3225435_+	hypothetical protein	NA	NA	NA	NA
AUK97985.1\|3225425_3226553_+	argininosuccinate lyase	NA	NA	NA	NA
AUK97986.1\|3226611_3227595_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK98952.1\|3227791_3228808_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUK97987.1\|3229004_3229829_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUK97988.1\|3229906_3230797_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK97989.1\|3231000_3232152_+	cystathionine beta-lyase	NA	NA	NA	NA
AUK97990.1\|3232185_3233187_+	peptidase M14	NA	NA	NA	NA
AUK97991.1\|3233315_3234287_+	hypothetical protein	NA	NA	NA	NA
AUK97992.1\|3234311_3236396_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
AUK98953.1\|3236462_3237455_-	hypothetical protein	NA	NA	NA	NA
AUK97993.1\|3237563_3238898_-	hypothetical protein	NA	NA	NA	NA
AUK97994.1\|3238923_3240936_-	hydantoin utilization protein B	NA	NA	NA	NA
AUK98954.1\|3240932_3242981_-	hydantoinase	NA	NA	NA	NA
AUK97995.1\|3243084_3243732_+	IclR family transcriptional regulator	NA	NA	NA	NA
AUK98955.1\|3243914_3244367_+	azurin	NA	NA	NA	NA
AUK97996.1\|3244410_3245082_-	MarR family transcriptional regulator	NA	NA	NA	NA
AUK97997.1\|3245096_3246590_-	RND transporter	NA	NA	NA	NA
AUK97998.1\|3246586_3249700_-	multidrug efflux protein	S5VTK5	Leptospira_phage	4.5e-57	21.5
AUK97999.1\|3249712_3250819_-	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AUK98000.1\|3250942_3251611_-	transcriptional regulator	NA	NA	NA	NA
AUK98001.1\|3251831_3252782_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_19

3351395 : 3394299

Planktothrix_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK98076.1\|3351395_3352346_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98963.1\|3352527_3352875_+	transcriptional regulator	NA	NA	NA	NA
AUK98077.1\|3355410_3356313_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98078.1\|3356425_3356851_+	hypothetical protein	NA	NA	NA	NA
AUK98079.1\|3356928_3357900_+	hypothetical protein	NA	NA	NA	NA
AUK98964.1\|3358019_3360464_+	ligand-gated channel	NA	NA	NA	NA
AUK98080.1\|3360479_3361070_-	polyisoprenoid-binding protein	NA	NA	NA	NA
AUK98081.1\|3361116_3361272_-	hypothetical protein	NA	NA	NA	NA
AUK98082.1\|3361313_3362216_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98083.1\|3362421_3363687_-	saccharopine dehydrogenase	NA	NA	NA	NA
AUK98084.1\|3363720_3364818_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA
AUK98085.1\|3365472_3366423_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98086.1\|3366423_3366993_+	transcriptional regulator	NA	NA	NA	NA
AUK98087.1\|3367060_3367876_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUK98088.1\|3368042_3369662_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK98089.1\|3369740_3370682_+	peptide ABC transporter	NA	NA	NA	NA
AUK98090.1\|3370681_3371566_+	peptide ABC transporter permease	NA	NA	NA	NA
AUK98091.1\|3371569_3373222_+	microcin ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-16	30.8
AUK98092.1\|3373261_3374659_+	amidase	NA	NA	NA	NA
AUK98093.1\|3374700_3376080_+	aspartate aminotransferase family protein	NA	NA	NA	NA
AUK98094.1\|3376119_3376338_-	hypothetical protein	NA	NA	NA	NA
AUK98095.1\|3376678_3377551_+	carboxyvinyl-carboxyphosphonate phosphorylmutase	NA	NA	NA	NA
AUK98096.1\|3377710_3378661_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98097.1\|3379392_3379770_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
AUK98098.1\|3379754_3380456_-	hypothetical protein	NA	NA	NA	NA
AUK98099.1\|3380599_3381292_-	mannose-1-phosphate guanylyltransferase	NA	NA	NA	NA
AUK98965.1\|3381291_3382332_-	aminoglycoside phosphotransferase	NA	NA	NA	NA
AUK98100.1\|3382510_3384877_+	LPS biosynthesis protein	NA	NA	NA	NA
AUK98101.1\|3384873_3386433_+	molecular chaperone SurA	NA	NA	NA	NA
AUK98102.1\|3386457_3387255_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase	NA	NA	NA	NA
AUK98103.1\|3387286_3388432_-	glycerate kinase	W6LM47	Streptococcus_phage	1.7e-41	42.2
AUK98104.1\|3388536_3389979_+	pyruvate kinase	NA	NA	NA	NA
AUK98105.1\|3389981_3391211_-	hypothetical protein	NA	NA	NA	NA
AUK98106.1\|3393348_3394299_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_20

3403591 : 3436225

uncultured_Caudovirales_phage(21.05%)

tail,tRNA,terminase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK98118.1\|3403591_3405322_-\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	4.6e-11	29.4
AUK98119.1\|3405387_3405960_+	RNA pyrophosphohydrolase	NA	NA	NA	NA
AUK98120.1\|3405940_3406627_+	DNA-binding response regulator	NA	NA	NA	NA
AUK98121.1\|3406686_3407055_+	hypothetical protein	NA	NA	NA	NA
AUK98122.1\|3406982_3407654_+	hypothetical protein	Q5QF62	Pseudomonas_virus	4.7e-36	39.9
AUK98123.1\|3407982_3408204_+	hypothetical protein	NA	NA	NA	NA
AUK98124.1\|3408203_3408485_+	hypothetical protein	NA	NA	NA	NA
AUK98125.1\|3408481_3408997_-	hypothetical protein	NA	NA	NA	NA
AUK98126.1\|3408996_3409548_-	lysozyme	NA	NA	NA	NA
AUK98127.1\|3409526_3409769_-	hypothetical protein	NA	NA	NA	NA
AUK98128.1\|3409773_3410586_-	hypothetical protein	NA	NA	NA	NA
AUK98129.1\|3410585_3410849_-	hypothetical protein	NA	NA	NA	NA
AUK98130.1\|3411067_3411484_-	hypothetical protein	NA	NA	NA	NA
AUK98131.1\|3411488_3415445_-	hypothetical protein	A0A0B5A1N2	Achromobacter_phage	3.9e-215	40.8
AUK98132.1\|3415437_3415827_-	hypothetical protein	A0A0G3EYJ9	Achromobacter_phage	3.0e-35	50.0
AUK98133.1\|3415823_3416357_-	hypothetical protein	A5A3Q9	Burkholderia_phage	1.1e-40	46.9
AUK98134.1\|3416424_3416784_-	hypothetical protein	NA	NA	NA	NA
AUK98135.1\|3416793_3419406_-\|tail	phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-105	38.6
AUK98136.1\|3419431_3419722_-	hypothetical protein	A0A2H4JBP7	uncultured_Caudovirales_phage	3.7e-14	45.2
AUK98137.1\|3419739_3420069_-	hypothetical protein	A0A2H4J121	uncultured_Caudovirales_phage	2.9e-15	44.0
AUK98138.1\|3420078_3420597_-\|tail	phage tail protein	A0A1S5R1H0	Pseudomonas_phage	5.4e-24	38.3
AUK98139.1\|3420851_3421352_-	HNH endonuclease	A0A1I9SEX5	Klebsiella_phage	4.4e-31	45.1
AUK98140.1\|3421359_3421782_-	hypothetical protein	NA	NA	NA	NA
AUK98141.1\|3421778_3422177_-	hypothetical protein	I6PCW1	Cronobacter_phage	4.2e-16	38.0
AUK98142.1\|3422173_3422569_-	hypothetical protein	A0A2D2W284	Stenotrophomonas_phage	7.8e-07	35.0
AUK98143.1\|3422568_3422769_-	hypothetical protein	NA	NA	NA	NA
AUK98144.1\|3422770_3423253_-	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	1.8e-13	37.1
AUK98145.1\|3423315_3423567_-	hypothetical protein	NA	NA	NA	NA
AUK98146.1\|3424241_3425192_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98147.1\|3425620_3426223_-	hypothetical protein	R9TF81	Synechococcus_phage	7.9e-27	43.6
AUK98148.1\|3426345_3426588_-	hypothetical protein	A0A0H5AUE5	Pseudomonas_phage	5.6e-16	53.2
AUK98149.1\|3426593_3427706_-	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	2.1e-102	49.7
AUK98150.1\|3427677_3429096_-	hypothetical protein	R9TF43	Synechococcus_phage	2.2e-99	42.1
AUK98151.1\|3429098_3430376_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.4e-150	64.7
AUK98152.1\|3430362_3430848_-\|terminase	terminase	C7U0W1	Enterobacteria_phage	7.3e-39	61.5
AUK98153.1\|3432454_3432676_+	hypothetical protein	NA	NA	NA	NA
AUK98154.1\|3432690_3433389_+	hypothetical protein	NA	NA	NA	NA
AUK98155.1\|3433381_3433702_+	hypothetical protein	NA	NA	NA	NA
AUK98966.1\|3434181_3434793_+	LexA family transcriptional repressor	NA	NA	NA	NA
AUK98156.1\|3434864_3435071_+	hypothetical protein	NA	NA	NA	NA
AUK98157.1\|3435322_3436225_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_21

3637435 : 3684235

Lake_Baikal_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK98336.1\|3637435_3638386_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98337.1\|3638502_3639570_+	choloylglycine hydrolase	NA	NA	NA	NA
AUK98338.1\|3639645_3642774_-	ribonuclease E/G	NA	NA	NA	NA
AUK98339.1\|3643341_3644247_+	RNA pseudouridine synthase	NA	NA	NA	NA
AUK98340.1\|3644249_3644921_+	HAD family hydrolase	NA	NA	NA	NA
AUK98341.1\|3645077_3646037_+	mononuclear molybdenum enzyme YedY	NA	NA	NA	NA
AUK98342.1\|3646044_3646707_+	sulfoxide reductase heme-binding subunit YedZ	NA	NA	NA	NA
AUK98343.1\|3646703_3647654_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98344.1\|3647775_3649029_+	carnitine dehydratase	NA	NA	NA	NA
AUK98345.1\|3649006_3649969_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK98346.1\|3650100_3650595_+	dehydratase	NA	NA	NA	NA
AUK98347.1\|3650594_3651827_+	mesaconyl-CoA isomerase	NA	NA	NA	NA
AUK98977.1\|3651961_3652186_-	hypothetical protein	NA	NA	NA	NA
AUK98348.1\|3652255_3652486_-	hypothetical protein	NA	NA	NA	NA
AUK98349.1\|3652572_3652854_+	hypothetical protein	NA	NA	NA	NA
AUK98350.1\|3652840_3653827_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK98351.1\|3653970_3654375_+	hypothetical protein	NA	NA	NA	NA
AUK98352.1\|3654516_3657903_+	molybdopterin oxidoreductase	NA	NA	NA	NA
AUK98353.1\|3657933_3659397_+	Short chain fatty acid transporter	NA	NA	NA	NA
AUK98978.1\|3659417_3661034_+	1-pyrroline-5-carboxylate dehydrogenase	NA	NA	NA	NA
AUK98354.1\|3661119_3661779_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUK98355.1\|3661808_3662249_-	hypothetical protein	NA	NA	NA	NA
AUK98356.1\|3662759_3662963_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	5.8e-14	58.2
AUK98357.1\|3663138_3664044_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK98358.1\|3664190_3665093_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98359.1\|3665238_3666141_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98360.1\|3666239_3667190_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98361.1\|3668971_3670165_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AUK98362.1\|3670230_3671259_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUK98363.1\|3671285_3672458_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUK98364.1\|3672583_3673561_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK98365.1\|3673571_3674543_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK98366.1\|3674609_3675395_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUK98367.1\|3675387_3676620_-	CoA transferase	NA	NA	NA	NA
AUK98368.1\|3676815_3677571_-	hypothetical protein	A0A0R6PEZ3	Moraxella_phage	2.9e-42	40.8
AUK98369.1\|3677681_3678200_+	methyltransferase	G3MA03	Bacillus_virus	2.1e-12	38.9
AUK98979.1\|3679988_3681389_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUK98370.1\|3681488_3681833_+	TIGR01244 family protein	NA	NA	NA	NA
AUK98371.1\|3681921_3682392_+	universal stress protein	NA	NA	NA	NA
AUK98372.1\|3682802_3683201_+	elongation factor G	E4ZFJ7	Streptococcus_phage	9.0e-19	44.3
AUK98373.1\|3683332_3684235_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_22

3783269 : 3837465

Paramecium_bursaria_Chlorella_virus(14.29%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK98467.1\|3783269_3784172_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98468.1\|3784342_3785071_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA
AUK98469.1\|3785167_3786346_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
AUK98470.1\|3786342_3787176_+	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA	NA	NA	NA
AUK98471.1\|3787212_3787953_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AUK98472.1\|3788072_3789248_-	dihydroorotase	NA	NA	NA	NA
AUK98473.1\|3789244_3790198_-	aspartate carbamoyltransferase	A7RB08	Paramecium_bursaria_Chlorella_virus	2.5e-30	35.8
AUK98474.1\|3790211_3790613_-	Holliday junction DNA helicase RuvA	NA	NA	NA	NA
AUK98985.1\|3790605_3791211_-	hypothetical protein	NA	NA	NA	NA
AUK98986.1\|3791298_3791463_-	rubredoxin	NA	NA	NA	NA
AUK98475.1\|3791579_3792428_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA
AUK98476.1\|3792424_3793078_+	thiamine-phosphate diphosphorylase	NA	NA	NA	NA
AUK98477.1\|3793094_3794378_+	glutamate-1-semialdehyde-2,1-aminomutase	NA	NA	NA	NA
AUK98478.1\|3794617_3796243_+	hypothetical protein	NA	NA	NA	NA
AUK98479.1\|3796336_3796738_-	enamine deaminase RidA	NA	NA	NA	NA
AUK98480.1\|3796762_3797197_-	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA
AUK98481.1\|3797198_3798848_-	2-aminobenzoate-CoA ligase	A0A2H4PQU7	Staphylococcus_phage	2.6e-56	31.2
AUK98482.1\|3798888_3800058_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUK98483.1\|3800060_3800924_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUK98484.1\|3804287_3804992_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-16	32.2
AUK98485.1\|3804985_3805780_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.6e-09	23.5
AUK98486.1\|3805776_3806742_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUK98487.1\|3806745_3807666_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUK98488.1\|3807762_3808926_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK98489.1\|3809148_3810039_+	esterase	NA	NA	NA	NA
AUK98490.1\|3810042_3810546_+	MarR family transcriptional regulator	NA	NA	NA	NA
AUK98491.1\|3810588_3811587_+	hypothetical protein	NA	NA	NA	NA
AUK98492.1\|3811583_3812534_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98493.1\|3812649_3812910_+	hypothetical protein	NA	NA	NA	NA
AUK98494.1\|3813149_3814052_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98495.1\|3814111_3814672_+	5'-3'-deoxyribonucleotidase	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	3.2e-14	30.8
AUK98496.1\|3816174_3817056_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUK98497.1\|3817169_3818372_+	MFS transporter	NA	NA	NA	NA
AUK98498.1\|3818500_3820360_-	dihydroxy-acid dehydratase	NA	NA	NA	NA
AUK98499.1\|3820437_3821247_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUK98500.1\|3821317_3822319_+	hypothetical protein	NA	NA	NA	NA
AUK98501.1\|3822350_3823211_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUK98502.1\|3823410_3824415_+	acetylesterase	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	7.5e-30	31.5
AUK98503.1\|3824411_3825998_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK98504.1\|3826006_3826933_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA
AUK98505.1\|3826955_3827582_+	hypothetical protein	NA	NA	NA	NA
AUK98506.1\|3827680_3828631_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98987.1\|3828627_3829764_-	2-alkenal reductase	W5SAB9	Pithovirus	1.2e-07	31.2
AUK98507.1\|3829817_3830594_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
AUK98508.1\|3830618_3831077_-	large-conductance mechanosensitive channel protein	NA	NA	NA	NA
AUK98988.1\|3831216_3831858_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
AUK98509.1\|3831922_3833305_+	cytochrome b	NA	NA	NA	NA
AUK98989.1\|3833330_3834179_+	cytochrome c1	NA	NA	NA	NA
AUK98510.1\|3834337_3834949_+	glutathione S-transferase	NA	NA	NA	NA
AUK98511.1\|3834958_3835408_+\|protease	ClpXP protease specificity-enhancing factor	NA	NA	NA	NA
AUK98512.1\|3835926_3836067_-	hypothetical protein	NA	NA	NA	NA
AUK98513.1\|3836074_3836236_-	DUF4224 domain-containing protein	NA	NA	NA	NA
AUK98514.1\|3836562_3837465_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_23

3878334 : 3949704

uncultured_Caudovirales_phage(12.5%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK98547.1\|3878334_3879285_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98548.1\|3879281_3880232_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98549.1\|3880318_3881221_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98550.1\|3881383_3882385_-	restriction endonuclease	NA	NA	NA	NA
AUK98551.1\|3882475_3883042_-	preprotein translocase subunit SecD	NA	NA	NA	NA
AUK98552.1\|3883360_3885274_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
AUK98553.1\|3885315_3886746_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
AUK98554.1\|3886858_3888271_-	hydroxyacid dehydrogenase	NA	NA	NA	NA
AUK98555.1\|3888287_3888983_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUK98556.1\|3889200_3890151_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98557.1\|3890175_3891075_-	virginiamycin B lyase	NA	NA	NA	NA
AUK98558.1\|3891229_3891778_+	GNAT family N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	1.2e-21	41.7
AUK98559.1\|3891816_3892536_-	7-cyano-7-deazaguanine synthase QueC	A0A0A0RPC6	Escherichia_phage	8.0e-50	43.9
AUK98560.1\|3892706_3895550_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AUK98561.1\|3899395_3900328_+	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
AUK98562.1\|3900439_3901789_+	short-chain fatty acid transporter	NA	NA	NA	NA
AUK98563.1\|3901820_3902546_+	short-chain dehydrogenase	NA	NA	NA	NA
AUK98992.1\|3902596_3903379_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUK98564.1\|3903577_3904264_+	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AUK98565.1\|3904263_3904908_+	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AUK98566.1\|3904964_3905240_+	muconolactone delta-isomerase	NA	NA	NA	NA
AUK98567.1\|3905265_3905562_+	hypothetical protein	NA	NA	NA	NA
AUK98568.1\|3905607_3906387_+	3-oxoadipate enol-lactonase	NA	NA	NA	NA
AUK98993.1\|3906392_3907433_+	cyclase	NA	NA	NA	NA
AUK98569.1\|3907537_3907861_-	PsiF repeat family protein	NA	NA	NA	NA
AUK98570.1\|3908017_3908368_-	hypothetical protein	NA	NA	NA	NA
AUK98571.1\|3908340_3908919_-	hypothetical protein	NA	NA	NA	NA
AUK98572.1\|3909580_3910549_-	hypothetical protein	NA	NA	NA	NA
AUK98573.1\|3910577_3911789_-	formyl-CoA transferase	NA	NA	NA	NA
AUK98574.1\|3911858_3912599_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUK98575.1\|3912743_3915608_-	glycine dehydrogenase (aminomethyl-transferring)	E3SN07	Prochlorococcus_phage	1.2e-261	51.4
AUK98576.1\|3915667_3916042_-	glycine cleavage system protein H	NA	NA	NA	NA
AUK98577.1\|3916123_3917224_-	glycine cleavage system protein T	NA	NA	NA	NA
AUK98578.1\|3918507_3919143_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.8e-83	73.8
AUK98579.1\|3920292_3921498_-	hypothetical protein	NA	NA	NA	NA
AUK98580.1\|3921573_3923844_-	lysine decarboxylase	NA	NA	NA	NA
AUK98994.1\|3923998_3924448_-	hypothetical protein	NA	NA	NA	NA
AUK98581.1\|3924721_3925069_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUK98582.1\|3925097_3925517_+	glyoxalase	NA	NA	NA	NA
AUK98583.1\|3925544_3925967_+	glyoxalase	NA	NA	NA	NA
AUK98584.1\|3925974_3926538_-	dCTP deaminase	S5VM63	Pseudomonas_phage	2.6e-72	75.3
AUK98585.1\|3926598_3930273_-	hypothetical protein	NA	NA	NA	NA
AUK98586.1\|3930269_3932174_-	hypothetical protein	NA	NA	NA	NA
AUK98587.1\|3933363_3933636_+	hypothetical protein	NA	NA	NA	NA
AUK98588.1\|3933884_3935963_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-27	23.6
AUK98589.1\|3936000_3936735_-	sulfurtransferase	NA	NA	NA	NA
AUK98590.1\|3936795_3937611_-	hypothetical protein	NA	NA	NA	NA
AUK98591.1\|3937702_3938230_-	hypothetical protein	NA	NA	NA	NA
AUK98592.1\|3939345_3940248_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98995.1\|3940502_3940979_+	bacterioferritin	NA	NA	NA	NA
AUK98593.1\|3941060_3941732_-	hypothetical protein	NA	NA	NA	NA
AUK98594.1\|3941768_3943376_-	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	9.3e-14	37.8
AUK98595.1\|3943424_3944054_-	threonine transporter RhtB	NA	NA	NA	NA
AUK98596.1\|3944087_3945518_-	RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.8e-44	29.8
AUK98597.1\|3945800_3946430_+	hypothetical protein	NA	NA	NA	NA
AUK98598.1\|3946407_3947310_+	hypothetical protein	NA	NA	NA	NA
AUK98599.1\|3948753_3949704_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_24

3978488 : 4036960

Planktothrix_phage(22.22%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK98625.1\|3978488_3979439_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98626.1\|3980705_3981584_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK98627.1\|3981611_3981896_-	bacterioferritin	NA	NA	NA	NA
AUK98628.1\|3982006_3983446_-	RNA polymerase sigma-54 factor	NA	NA	NA	NA
AUK98629.1\|3983444_3984092_+	hypothetical protein	NA	NA	NA	NA
AUK98630.1\|3984518_3986219_+	2-isopropylmalate synthase	NA	NA	NA	NA
AUK98631.1\|3986309_3987575_-	amidase	NA	NA	NA	NA
AUK98996.1\|3987861_3988473_-	hypothetical protein	NA	NA	NA	NA
AUK98632.1\|3988456_3988846_+	hypothetical protein	NA	NA	NA	NA
AUK98633.1\|3988842_3989853_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK98634.1\|3990689_3991523_+	ABC transporter permease	NA	NA	NA	NA
AUK98635.1\|3991519_3992425_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.8e-21	31.7
AUK98636.1\|3992570_3993473_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98637.1\|3993573_3994395_+	phosphodiesterase	NA	NA	NA	NA
AUK98638.1\|3994500_3995541_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-22	33.7
AUK98639.1\|3995583_3996876_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK98640.1\|3996886_3997762_+	ABC transporter permease	NA	NA	NA	NA
AUK98641.1\|3997758_3998559_+	ABC transporter permease	NA	NA	NA	NA
AUK98997.1\|3998634_3999651_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUK98642.1\|3999933_4000251_-	hypothetical protein	NA	NA	NA	NA
AUK98998.1\|4000341_4000689_-	hypothetical protein	NA	NA	NA	NA
AUK98643.1\|4000976_4002659_+\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
AUK98644.1\|4003412_4004042_+	thiol:disulfide interchange protein	NA	NA	NA	NA
AUK98645.1\|4004123_4005317_-	cystathionine beta-lyase	NA	NA	NA	NA
AUK98646.1\|4006264_4007167_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98647.1\|4007202_4008264_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.6e-78	44.8
AUK98648.1\|4008260_4009157_+	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
AUK98649.1\|4009214_4009763_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.7e-47	53.4
AUK98650.1\|4009777_4010779_-	lipoyl synthase	NA	NA	NA	NA
AUK98651.1\|4010840_4011503_-	octanoyltransferase	NA	NA	NA	NA
AUK98652.1\|4011510_4011786_-	DUF493 domain-containing protein	NA	NA	NA	NA
AUK98653.1\|4011861_4012728_-	D-amino acid aminotransferase	NA	NA	NA	NA
AUK98999.1\|4012808_4013987_-	peptidase	B6DZZ7	Stx2-converting_phage	5.8e-66	40.5
AUK98654.1\|4014197_4014851_-	alpha/beta hydrolase	NA	NA	NA	NA
AUK98655.1\|4014880_4015483_-	hypothetical protein	NA	NA	NA	NA
AUK98656.1\|4015483_4015705_-	hypothetical protein	NA	NA	NA	NA
AUK98657.1\|4015794_4016262_+	hypothetical protein	NA	NA	NA	NA
AUK98658.1\|4016415_4017255_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.1e-21	32.4
AUK98659.1\|4017254_4018385_-	ABC transporter permease	NA	NA	NA	NA
AUK98660.1\|4018459_4019326_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
AUK98661.1\|4019322_4020126_+	pantothenate kinase	NA	NA	NA	NA
AUK98662.1\|4020150_4020306_+	hypothetical protein	NA	NA	NA	NA
AUK98663.1\|4020322_4021609_-	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
AUK98664.1\|4021610_4022618_-	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
AUK98665.1\|4022748_4023801_+	oxidoreductase	NA	NA	NA	NA
AUK98666.1\|4023804_4024380_+	N-acetyltransferase	NA	NA	NA	NA
AUK98667.1\|4024383_4025484_+	aminotransferase DegT	A0A2K9L0G1	Tupanvirus	3.3e-31	29.7
AUK98668.1\|4025491_4026580_+	UDP-N-acetylglucosamine 2-epimerase	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.8e-46	36.3
AUK98669.1\|4026603_4027863_+	glycosyltransferase WbuB	NA	NA	NA	NA
AUK98670.1\|4027925_4029113_+	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA
AUK98671.1\|4029109_4029703_+	sugar transferase	NA	NA	NA	NA
AUK98672.1\|4029964_4031071_+	glycosyl transferase	NA	NA	NA	NA
AUK98673.1\|4031067_4031772_+	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA
AUK98674.1\|4033119_4034994_+	polysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	2.0e-23	26.9
AUK99000.1\|4034990_4035935_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUK98675.1\|4036057_4036960_+\|transposase	IS481 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP018038

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection