CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP018042	Bordetella pertussis strain J313 chromosome, complete genome	5 crisprs	csa3,cas3,DinG,DEDDh	0	0	26	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP018042_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018042_1

250582-250666

Orphan

Consensus_repeat	Method
GGTGCCTGTCCCCGCGGGGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP018042_1

>merge|CP018042|1|250582-250666|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAGATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAGGGTGCCTGTCCCCGCGGGGACAG

>CP018042|1|1|250582-250666|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAG	ATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAG
GGTGCCTGTCCCCGCGGGGACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP018042.1\|AUL09985.1\|251614_253504_-\|DNA-mismatch-repair-protein-MutL	unknown	unknown	gnl\|CDD\|234630
CP018042.1\|AUL09978.1\|240327_241371_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270320
CP018042.1\|AUL13114.1\|253608_254229_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182775
CP018042.1\|AUL09988.1\|256375_257767_+\|fumarate-hydratase,-class-II	unknown	unknown	gnl\|CDD\|234779
CP018042.1\|AUL09986.1\|254371_255757_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|182376
CP018042.1\|AUL09981.1\|246517_247873_-\|poly(A)-polymerase	unknown	unknown	gnl\|CDD\|130997
CP018042.1\|AUL09976.1\|238768_239524_+\|gamma-hydroxybutyrate-dehydrogenase	unknown	unknown	gnl\|CDD\|185358
CP018042.1\|AUL09987.1\|255687_256224_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|223873
CP018042.1\|AUL09982.1\|247873_248572_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319796
CP018042.1\|AUL13113.1\|242384_243644_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129868
CP018042.1\|AUL09980.1\|246029_246521_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|172582
CP018042.1\|AUL09990.1\|258899_259883_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270295
CP018042.1\|AUL09984.1\|250676_251618_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
CP018042.1\|AUL09991.1\|259947_260847_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
CP018042.1\|AUL09989.1\|257783_258764_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223751
CP018042.1\|AUL09983.1\|249521_250571_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
CP018042.1\|AUL09977.1\|239540_240284_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
CP018042.1\|AUL09992.1\|260953_262708_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
CP018042.1\|AUL09979.1\|245054_246011_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270296
CP018042.1\|AUL09975.1\|238108_238519_+\|4-carboxymuconolactone-decarboxylase	unknown	unknown	gnl\|CDD\|131478

Protein	Function_ID	Function_description	E-value
CP018042.1\|AUL09985.1\|251614_253504_-\|DNA-mismatch-repair-protein-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
CP018042.1\|AUL09978.1\|240327_241371_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99378e-85
CP018042.1\|AUL13114.1\|253608_254229_+\|hypothetical-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	8.25718e-70
CP018042.1\|AUL09988.1\|256375_257767_+\|fumarate-hydratase,-class-II	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
CP018042.1\|AUL09986.1\|254371_255757_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	1.25625e-84
CP018042.1\|AUL09981.1\|246517_247873_-\|poly(A)-polymerase	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	4.58369e-147
CP018042.1\|AUL09976.1\|238768_239524_+\|gamma-hydroxybutyrate-dehydrogenase	gnl\|CDD\|185358	PRK15461, PRK15461, sulfolactaldehyde 3-reductase.	1.19571e-122
CP018042.1\|AUL09987.1\|255687_256224_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	2.28113e-54
CP018042.1\|AUL09982.1\|247873_248572_-\|hypothetical-protein	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.91431e-64
CP018042.1\|AUL13113.1\|242384_243644_+\|hypothetical-protein	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.48771e-95
CP018042.1\|AUL09980.1\|246029_246521_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|172582	PRK14092, PRK14092, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.	2.78166e-87
CP018042.1\|AUL09990.1\|258899_259883_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.35876e-158
CP018042.1\|AUL09984.1\|250676_251618_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	4.17279e-156
CP018042.1\|AUL09991.1\|259947_260847_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.62875e-38
CP018042.1\|AUL09989.1\|257783_258764_-\|hypothetical-protein	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.13912e-41
CP018042.1\|AUL09983.1\|249521_250571_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
CP018042.1\|AUL09977.1\|239540_240284_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.58304e-45
CP018042.1\|AUL09992.1\|260953_262708_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
CP018042.1\|AUL09979.1\|245054_246011_+\|hypothetical-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	6.01101e-118
CP018042.1\|AUL09975.1\|238108_238519_+\|4-carboxymuconolactone-decarboxylase	gnl\|CDD\|131478	TIGR02425, putative_gamma-carboxymuconolactone_decarboxylase, 4-carboxymuconolactone decarboxylase. Members of this family are 4-carboxymuconolactone decarboxylase, which catalyzes the third step in the catabolism of protocatechuate (and therefore the fourth step in the catabolism of para-hydroxybenzoate, of 3-hydroxybenzoate, of vanillate, etc.). Most members of this family are encoded within protocatechuate catabolism operons. This protein is sometimes found as a fusion protein with other enzymes of the pathway, as in Rhodococcus opacus, Streptomyces avermitilis, and Caulobacter crescentus. [Energy metabolism, Other].	1.36265e-47

>CP018042.1|AUL09983.1|249521_250571_+|phosphoribosylformylglycinamidine-cyclo-ligase
MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIGGFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDVVMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPKLFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQDGMAQTVVV
>CP018042.1|AUL09982.1|247873_248572_-|hypothetical-protein
MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLFDHLEDAKS
>CP018042.1|AUL09981.1|246517_247873_-|poly(A)-polymerase
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEETAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
>CP018042.1|AUL09980.1|246029_246521_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MNGSPASTLAYVGLGASLGDAAATLRSVLAELAAAPGILACKASRLYRTAPVEAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLLLYGEQAIDHPRLSVPHPRMHERAFVLAPLCELVPALRLAQGDCAALLAALEDQAIEPLR
>CP018042.1|AUL09979.1|245054_246011_+|hypothetical-protein
MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDALARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQVPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQALATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTGSKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQMLERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP
>CP018042.1|AUL13113.1|242384_243644_+|hypothetical-protein
MMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGGLLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDMIERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACFMLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAAIGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVVNLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFLVLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMWLPQQVK
>CP018042.1|AUL09978.1|240327_241371_-|C4-dicarboxylate-ABC-transporter-substrate-binding-protein
MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPGDGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEPRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIHKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLEFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVSNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTLGKSASN
>CP018042.1|AUL09977.1|239540_240284_-|GntR-family-transcriptional-regulator
MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVGRFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIYQVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDGAGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSLHVRNAASVAIAILQDSLADAAATAE
>CP018042.1|AUL09976.1|238768_239524_+|gamma-hydroxybutyrate-dehydrogenase
MLPTATHIQAALEGADGALQGMGPGALFINMSTILPQETDLIAQRLAERGMRMLDSPVGRSAMEAQRGTLLILASGSAQDKARARDALLCMGNQVIDCGEVGGGSRVKVVNNFMGISLNALTAEALTLAEASGLSVELALEVMRGTIAGLGHMNITYPNKVLRGDLSAGFQVDLAHKDLGLALELAARSRACVPMGSAAFQSYTAARAQGRGGQDYSAIYPVMRSLSGLPEALPYQVDTPVEADPFGAAAR
>CP018042.1|AUL09975.1|238108_238519_+|4-carboxymuconolactone-decarboxylase
MALRPEFQTEQFQKGLAVRRAVVGDAYVDKSLNSADDLTASLQKLVTEYCWGEVWTRPGLERKTRSFLNLAMLIALNRPNELRLHLRGAINNGVTKDEIVEVVLQAAIYCGVPAALDAMKAVREVVETMEKEGAFA
>CP018042.1|AUL09984.1|250676_251618_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMDIGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTMLYYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQRALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAGLVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLTWLRAQPERVIIDCLAGDAVARTVDAMARALPD
>CP018042.1|AUL09985.1|251614_253504_-|DNA-mismatch-repair-protein-MutL
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>CP018042.1|AUL13114.1|253608_254229_+|hypothetical-protein
MVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPFLPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLDRNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVISLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ
>CP018042.1|AUL09986.1|254371_255757_-|N-acetylmuramoyl-L-alanine-amidase
MVERDCPPAHGALSPRAAARRRLISVAATLLVLPVVPRLAHAATILAVRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAALNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDLYPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAPPIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQPYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGASSTQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKINRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRYFTANPPLARVGDVS
>CP018042.1|AUL09987.1|255687_256224_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MSAPPTTLCLHLPDEAATENLARQLAPLVDGRRGGQPGGQIHLQGDLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAGFRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVPPPTARSLPAPPPADA
>CP018042.1|AUL09988.1|256375_257767_+|fumarate-hydratase,-class-II
MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPALKALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLHQLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALKTLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVMGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDMTNARR
>CP018042.1|AUL09989.1|257783_258764_-|hypothetical-protein
MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRHKLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWLAGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAVYGLARHSGNGLLRELARNPLLVSTLLSLACNLAGLSLPGPIDTVMARLGAAALALGIMCVGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTASAAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN
>CP018042.1|AUL09990.1|258899_259883_+|ABC-transporter-substrate-binding-protein
MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGSTDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD
>CP018042.1|AUL09991.1|259947_260847_-|LysR-family-transcriptional-regulator
MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGLLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANNHPGLTRTSLGHTELVHLSRLPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIERLRQACSVLQAQPAPQPE
>CP018042.1|AUL09992.1|260953_262708_+|gamma-glutamyltransferase
MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERAQAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVHYDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHRQHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVGHRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVREPVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFADRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAIEVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVANRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIALPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPRREGLALGD

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Crispr_ID: CP018042_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018042_2

432021-432114

Orphan

Consensus_repeat	Method
GTGCCTGTCCCCGCCGGGACAGGCAC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of CP018042_2

>merge|CP018042|2|432021-432114|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCACCCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGCGTGCCTGTCCCCGCCGGGACAGGCAC

>CP018042|2|2|432021-432114|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCAC	CCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGC
GTGCCTGTCCCCGCCGGGACAGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP018042.1\|AUL10153.1\|441031_442009_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176106
CP018042.1\|AUL10137.1\|420548_421043_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP018042.1\|AUL10142.1\|427130_427865_-\|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235574
CP018042.1\|AUL10149.1\|437021_437777_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223930
CP018042.1\|AUL10139.1\|422308_423514_+\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|129314
CP018042.1\|AUL13122.1\|425037_426351_-\|short-chain-fatty-acid-transporter	unknown	unknown	gnl\|CDD\|224942
CP018042.1\|AUL10138.1\|421135_422113_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018042.1\|AUL10145.1\|432200_432671_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
CP018042.1\|AUL10136.1\|419360_420419_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133030
CP018042.1\|AUL10143.1\|430357_431260_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018042.1\|AUL10152.1\|440049_441021_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
CP018042.1\|AUL10140.1\|423510_425022_+\|TRAP-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270238
CP018042.1\|AUL10148.1\|436392_436911_-\|methyltransferase	unknown	unknown	gnl\|CDD\|224204
CP018042.1\|AUL10144.1\|431391_431790_-\|elongation-factor-G	unknown	unknown	gnl\|CDD\|234569
CP018042.1\|AUL10147.1\|433203_434604_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224089
CP018042.1\|AUL10151.1\|439197_439983_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181723
CP018042.1\|AUL10150.1\|437972_439205_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
CP018042.1\|AUL10146.1\|432759_433104_-\|TIGR01244-family-protein	unknown	unknown	gnl\|CDD\|225984
CP018042.1\|AUL10141.1\|426541_426721_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377342
CP018042.1\|AUL10154.1\|442134_443307_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841

Protein	Function_ID	Function_description	E-value
CP018042.1\|AUL10153.1\|441031_442009_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176106	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LTTRs involved in degradation of aromatic compounds, such as CbnR, BenM, CatM, ClcR and TfdR, as well as that of other transcriptional regulators clustered together in phylogenetic trees, including XapR, HcaR, MprR, IlvR, BudR, AlsR, LysR, and OccR. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.33368e-60
CP018042.1\|AUL10137.1\|420548_421043_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.34959e-07
CP018042.1\|AUL10142.1\|427130_427865_-\|DNA-polymerase-III-subunit-epsilon	gnl\|CDD\|235574	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional.	2.40573e-142
CP018042.1\|AUL10149.1\|437021_437777_+\|hypothetical-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.14565e-78
CP018042.1\|AUL10139.1\|422308_423514_+\|sodium/glutamate-symporter	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	1.2444e-106
CP018042.1\|AUL13122.1\|425037_426351_-\|short-chain-fatty-acid-transporter	gnl\|CDD\|224942	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism].	6.57351e-166
CP018042.1\|AUL10138.1\|421135_422113_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.0826e-23
CP018042.1\|AUL10145.1\|432200_432671_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.38587e-30
CP018042.1\|AUL10136.1\|419360_420419_-\|glycosyltransferase	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	4.18053e-89
CP018042.1\|AUL10143.1\|430357_431260_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	5.3673e-23
CP018042.1\|AUL10152.1\|440049_441021_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.06741e-117
CP018042.1\|AUL10140.1\|423510_425022_+\|TRAP-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270238	cd13520, PBP2_TAXI_TRAP, Substrate binding domain of TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This group includes Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family and closely related proteins. TRAP transporters are ubiquitous in prokaryotes, but absent from eukaryotes. They are comprised of an SBP (substrate-binding protein) of the DctP or TAXI families and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function. The substrate-binding domain of TAXI proteins belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and tworeceptor cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.13066e-82
CP018042.1\|AUL10148.1\|436392_436911_-\|methyltransferase	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.12064e-44
CP018042.1\|AUL10144.1\|431391_431790_-\|elongation-factor-G	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	1.37761e-90
CP018042.1\|AUL10147.1\|433203_434604_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.43796e-109
CP018042.1\|AUL10151.1\|439197_439983_+\|enoyl-CoA-hydratase	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	5.15941e-155
CP018042.1\|AUL10150.1\|437972_439205_+\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.36236e-118
CP018042.1\|AUL10146.1\|432759_433104_-\|TIGR01244-family-protein	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	3.40043e-35
CP018042.1\|AUL10141.1\|426541_426721_-\|hypothetical-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	0.00323203
CP018042.1\|AUL10154.1\|442134_443307_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	4.27565e-82

>CP018042.1|AUL10144.1|431391_431790_-|elongation-factor-G
MTRRTSIERYRNIGISAHIDAGKATTTERILFYTGITHKLGEVHEGAATMDWMEQEQGRGITITSAATTAFWRGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQEVATVMVVLPGQ
>CP018042.1|AUL10143.1|430357_431260_+|IS481-family-transposase
MVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDKYNLLTVHS
>CP018042.1|AUL10142.1|427130_427865_-|DNA-polymerase-III-subunit-epsilon
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSDPEALAVHGLTTEFLADKPRFAEVAEQFLAFIADAELIAHNAAFDVKFFNAELQRIGRDPLNTHCENIVDSLLHARSLHPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVDDQGANANGALVLGKFDASVLTVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAESGQPG
>CP018042.1|AUL10141.1|426541_426721_-|hypothetical-protein
MHPDTNTMLIIIAAAVALMIVGFGLRDRNLGLGLLGIGLIAALATIAYKAYITFNSFYY
>CP018042.1|AUL13122.1|425037_426351_-|short-chain-fatty-acid-transporter
MFKLMSRSAVKMVERYLPDPYVFVVLLTLVAAGAAMIIEGQTPMAVVRWWGNGFWGLLTFAMQMLLVLVTGYMLASTPLVKRMLARLASLATSAGGAIILVSVVSLAASWINWGFGLVVGALFAKQIARQVRVDYRLLVASAYSGFIIWHGGLAGSIPLTIATEGHFSADKIGIIPTGDTIFAVFNLVIVVAMFILVPLVNRLMLPDEKESVYVDPARLEEASVPASDDDKRPAARLENSRLLAWLIAAGGLAYMFDYYVVRGAGLNLNVINFSFLILAILLHGTPRRLLASLDEAIKGGAGIVIQFPFYAGIMAIMMDSGLAATLSEWFVSIASAATLPFWTFISAGIVNIFIPSGGGQWAVQSPIVISAAQALGADMPRVAMAVAWGDAWTNMLQPFWALPVLAIAGLKAKDIMGYCIIQLLVTGVIISVGLSFF
>CP018042.1|AUL10140.1|423510_425022_+|TRAP-ABC-transporter-substrate-binding-protein
MTMFIRWLILSACLLLAACSRAPDTEILQRDVGQTLAATYGPDLFDIVALRRMGSATDSTAPPGQTRRVVYYDVVLGLKKDLTLGAWDQPGAAALVSLLGAGPRSISGVKSSGNAAGDQIVAHASAIYQRDAEQWVHVAPASFTATEAPSLDTGAPPPVTRQLLQTLEQITRSVPYSASSTAQHVVQQELERSVARINGRLARLQKGYPLATGPDKGEYLAFGQALAAIGRNEQVRVIPLITGGSADNMAMLRSGAAVAALSQADIAQLAYEGKGPFESQGPFSGLRALGSLYPELVHIVVRQGDGIATVGALRGKKIALGPSGSAVRTTLETVLAAHGLQPGRDYAVIDTPAAAALPQLSEGRVDAVAQVIGTPAAPLRAALTQARLALLPLDRAAIDKLVQADPTLMALDIPANTYPSQAAAIPTVGMAALLVTTADLTRDEAAHMVDVVYRAGQDLLAAGSAQGAQVSAANAGRGLSIPLHDGAVEAFEKLGAPPLPEGR
>CP018042.1|AUL10139.1|422308_423514_+|sodium/glutamate-symporter
MISLTPVQSLLACCLVLVAGRILTTRIGVLSRYSIPDPIVGGLLFAVLATALDTWGGIQISLETNIKPTLLLIFFGCIGLTADLKLLARGGPRLIAFLLALIPFLVLQNAVGLGLAWLLDMHPLMGLIGGTITLVGGHGTGAAYAARFADINNIQDVMALAMTAATIGLVLGGIIGGPVAEWLIRRHKLDPRMAGKDANQVLPEVETTAEAPTATSFITSLTAVFVTVVVGTYLAGLVEDAPISLPNFLWCLATGAIIRNFGGYVGIRLDDRVSEIIGSISLSLFLGLTMMTLDLSSVVRLAGPLALMLVAQALVCALYAGWAVFRMLKRDYEAAVMAAAFCGFAMGATATAIANMQALTRRHGPAPESFIVVPVTGAFLVDILNVIVLTSLIALPFVGGM
>CP018042.1|AUL10138.1|421135_422113_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHSYMVRADLAG
>CP018042.1|AUL10137.1|420548_421043_+|GNAT-family-N-acetyltransferase
MPQSYIVRTMRPADVEAVLRVQAAVYPASLLESAALFQNRIEIAPATCQVALDGQDLIGYLIAYPWDAGLPPALDRSLERLPGAADTWFVHDCAVLPAAQGGGVAAALLAGGRAQARRLGLRRASLVALAQAVGYWLRHGYQPLADSDALRAKLAGYGDGARYM
>CP018042.1|AUL10136.1|419360_420419_-|glycosyltransferase
MFMYTEFRSQLLAGAGTSAAGQSARMAVLAGDGATGVQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGIRYVQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVRRQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGLYAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLSLSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFIARQRRGRAKRAAKARSQ
>CP018042.1|AUL10145.1|432200_432671_-|universal-stress-protein
MFKKILIPTDGSPLSAQAANAGICFARSTGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKASAEQAEKYLKLILDRAETAGVKAESRAVSNFNVADGIVQAAGEAGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAHTAVLVYRVKEDKDKK
>CP018042.1|AUL10146.1|432759_433104_-|TIGR01244-family-protein
MSAAIKPLTENFAVAPQLGPADMADVAAAGYKSVIINRPDFEGGPDQPTAADVSQAAQALGLQVEYQPVVGSAMTAADVARFAELLRTMPGPVLAYCRTGTRCTNLFAAAQQLG
>CP018042.1|AUL10147.1|433203_434604_-|GntR-family-transcriptional-regulator
MRQADATLVTQLADDLARRIDEHGLRPGTRLPSIRRMAEQSGVSRFTVVEAYDRLVARGLVQSRHGAGFFVRARSASLTALASARVPQAAPETPVRVDVSWLLRNMFRETAAGMPGGAGLLPPEWLDPDMVAAAVRAVGRTVRGNLVSYGSPQGYAPLRQQLASMLQADGVPAHPERNLLTTNGVTHGLDIVARHLIKPGDTVLVEDPAWFVIFGRLAAFGARPVGVPRGPDGPDLAMLDRLAAEHKPRLYIINGAVHNPIGHTLSAGAAYDILRLAERHDFMVVEDDTYADLHPGGAMKLAALDRLERVILVGGFSKMLAASLRVGYIAAGAETLQRLTDLKMLAGLTSPELGERVVHRVLVEGQYQRHIERVRARVNEARLRSIQALQQLGLSVPHEPHAGMFVWADCGRDSEPVARNAAERGMLLAPGTLFSPSGAPSTMLRFSVAMVDTPGIWQSIAAVMAQ
>CP018042.1|AUL10148.1|436392_436911_-|methyltransferase
MDTVWMEIWTTVRNEFADIPDVAEATRIVLRLGMAVALGGLLGYERERSGKAAGLRTHMLVALGAALFVLVPLQGGMEVGDLSRVLQGVIAGIGFLGAGVIIKLGNEGEIRGLTTSAGIWLTAAIGVAAGMGREATALASTLIALFVLAALRRLEKRIAARDDKRVVAQPPP
>CP018042.1|AUL10149.1|437021_437777_+|hypothetical-protein
MDYLVSLAQQPAAWAALATLIAMEVVLGIDNLIFISILTNKLPPQHQTKARRIGIGMALILRLALLGTVAFIVQLTQPVFELFGHGFSWRDVILVAGGLFLVWKATKEIHHHVDPNPGDDMFGGKAATLGFAAAVAQILMLDLVFSIDSIITAVGMTEHIPIMFVAVIVAVAVMLLAAEPLARFIERNPTVVMLALAFLMMIGMTLIAEGFGAHVPKGYIYAAMAFSALVEGLNMMARRAREGRGAGAAGG
>CP018042.1|AUL10150.1|437972_439205_+|CoA-transferase
MSGPLEGVRILDVTTVLMGPYATQILGDLGADVIKVEPPAGDNVRGIGPGRHADMGGIFLHANRSKRSIALDLKNPAGREALLKVAATCDVLVYNVRPQAMARLGLSYAEVAQANPSILYVGMYGYDQRGPYAARAAYDDLIQGAVGIPSLSVEAGSDIPRYAPSAMVDRIVGISAANAVTAGLYHRARTGQGQAIDVPMFETMAHLILGDHMMGQTFEPPLGPPGYPRILNADRRPYATRNGHICVLLYADKHWKAFFELIGQPGRDAADPRFRDIGTRTQHIHAIYRLVSDAIASRTTEEWLAAFEAADIPAMPVHTMASLLRDPHLEAIGFFGMVDHPSEGAVRMMAVPSRWSGTPPQPRGHAPRLGEHSVDVLKEAGYDDEAIAALVRNGAAIAAARQLPEGTDHD
>CP018042.1|AUL10151.1|439197_439983_+|enoyl-CoA-hydratase
MTDFLRHERHGGVLLLTMDRERTRNALSDADAVEALVQACARIGADLSVRAVVLTGSHGVFSSGGNLKTLSDTVGAGLGEPVHSLQAYRSGIQRIPLALYNLEVPTIAAVNGPAIGAGCDLACMCDIRLAARQASFAESFVKLGLTPGDGGAWLLPRIVGMSRACELAFTGRSIDAARARELGLVSEVFDADALLPAALALAQEIAQHSGHALRLTKRLLREGQHTRLDTLLELSAGFQALAHHTQEHAGALDAHLSRKRG
>CP018042.1|AUL10152.1|440049_441021_+|ABC-transporter-substrate-binding-protein
MHSRTLALALLSVAALAQGGSARAASDYPAHPVKIIVSLPPGSGADTTARFLSKHLAERFKQPFVVENRPGGNSFIAAQAVATAPPDGYTLFVASNSPMTTNAAVFKNLPYDAVKDFAPVAPIARFPMALVVPANSPYRSVADLVAAARAAPGQLNFASGTATYQVVLELFHEQNGIKATHVPYKGTSAALADVAGGVVQYSVADVSAALPLIRGGKLRPLAVTSTRRIKDLPDVPTMQESGNKGFEAYAWTAAFFPAKVDPAIVARVSDAVQALVRSQEGKAFMEQLGGEPFVGGPDTLAAFQRDELASMRRIAKLANIQQE
>CP018042.1|AUL10153.1|441031_442009_-|LysR-family-transcriptional-regulator
MWTGQYIVHIASPAHHWRRAVELRQLKQLLVLSETLNFHRAAERLHMAQPPLSTAIKKLEQELGVQLFERLPAGLQPTPAAEVVLRYARATLFYADEIQRAAQEGASGKQGMLKVGFVGSSIYSLMPQLLSAFRKDYPRVDLVIEESTTVDLLRRLDAHTLDVALVRFPVLEPSTARITLLQADHLMLAVPAGSRYAQRDDVALDELADEPFIGYSRTHVPGMHALIMYAFQQYGVVPHIAQEAIQVQTILSLVESGLGLAIVPKVACRQAGSGVRLVNVPQLAETIKVGIALAVHPDNATPTTANFVDMACRLMQTEPAAGQAR
>CP018042.1|AUL10154.1|442134_443307_+|acyl-CoA-dehydrogenase
MGAILGTIIEALQLAAIPAHDEALRPAVRAFLDEALREMPADRRARSWMGHDAEFSRALARQGWLGLTLPVEYGGAGRSNFARFVLSEELLAVGAPVSAHWVADRQTAPLILRFGSPAQRAFYLPRIIRGEAFFAIGMSEPDTGSDLASVRTRATPVADGWLLNGRKIWTTNAHRSHYMCALVRTSGAPEDRHRGLSQMIFDLALPGIEIRPIRDIAGDAHFCEVLFDNVLLPHDALVGEEGSGWRQVMAELALERSGPERIYSSMVLLDGWLAHLRCDAAPQRAQVCLAGRLAARLAVLRSMSLAVSQRLEQGADASLAAVLVKDLGTEFEQAVPELIGQALHASPQPAPDDVLMRTLAYLTLINPTFSLRGGTRHILRGIIARELGLR

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Crispr_ID: CP018042_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018042_3

997377-997471

Orphan

Consensus_repeat	Method
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP018042_3

>merge|CP018042|3|997377-997471|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTTATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAGTAAAAGGGCACCCGCAAGGGTGCCTTTTT

>CP018042|3|3|997377-997471|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	ATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAG
TAAAAGGGCACCCGCAAGGGTGCCTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
CP018042.1\|AUL10627.1\|998341_999292_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018042.1\|AUL10625.1\|996929_997310_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
CP018042.1\|AUL10621.1\|989677_990742_+\|sulfate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213263
CP018042.1\|AUL10617.1\|986806_987841_+\|sulfate-transporter-subunit	unknown	unknown	gnl\|CDD\|224529
CP018042.1\|AUL10629.1\|1003108_1003681_-\|chorismate--pyruvate-lyase	unknown	unknown	gnl\|CDD\|225703
CP018042.1\|AUL10623.1\|995363_995744_+\|hypothetical-protein	unknown	unknown	unknown
CP018042.1\|AUL10620.1\|988870_989653_+\|sulfate-ABC-transporter-permease-subunit-CysW	unknown	unknown	gnl\|CDD\|226665
CP018042.1\|AUL10618.1\|987856_988060_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131194
CP018042.1\|AUL10619.1\|988081_988756_+\|sulfate-ABC-transporter-permease-subunit-CysT	unknown	unknown	gnl\|CDD\|131194
CP018042.1\|AUL10630.1\|1003740_1004472_+\|pseudouridylate-synthase	unknown	unknown	gnl\|CDD\|224108
CP018042.1\|AUL10633.1\|1010876_1011128_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225170
CP018042.1\|AUL13152.1\|991539_992448_+\|sulfate-adenylyltransferase-small-subunit	unknown	unknown	gnl\|CDD\|235375
CP018042.1\|AUL13153.1\|1000583_1001600_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
CP018042.1\|AUL10632.1\|1009424_1010807_+\|multidrug-transporter	unknown	unknown	gnl\|CDD\|273830
CP018042.1\|AUL10631.1\|1006248_1009428_+\|multidrug-efflux-RND-transporter-permease	unknown	unknown	gnl\|CDD\|273335
CP018042.1\|AUL10622.1\|993935_995210_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|275263
CP018042.1\|AUL13154.1\|1004523_1005441_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
CP018042.1\|AUL10628.1\|999396_1000446_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381320
CP018042.1\|AUL10624.1\|995751_996624_-\|multidrug-DMT-transporter-permease	unknown	unknown	gnl\|CDD\|274527
CP018042.1\|AUL10626.1\|997559_998246_+\|coenzyme-A-pyrophosphatase	unknown	unknown	gnl\|CDD\|239518

Protein	Function_ID	Function_description	E-value
CP018042.1\|AUL10627.1\|998341_999292_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP018042.1\|AUL10621.1\|989677_990742_+\|sulfate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.07125e-165
CP018042.1\|AUL10625.1\|996929_997310_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	1.34063e-62
CP018042.1\|AUL10617.1\|986806_987841_+\|sulfate-transporter-subunit	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
CP018042.1\|AUL10629.1\|1003108_1003681_-\|chorismate--pyruvate-lyase	gnl\|CDD\|225703	COG3161, UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) [Coenzyme metabolism].	1.05194e-17
CP018042.1\|AUL13153.1\|1000583_1001600_-\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	2.74666e-23
CP018042.1\|AUL10620.1\|988870_989653_+\|sulfate-ABC-transporter-permease-subunit-CysW	gnl\|CDD\|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	8.42883e-141
CP018042.1\|AUL10618.1\|987856_988060_+\|hypothetical-protein	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	4.38349e-06
CP018042.1\|AUL10619.1\|988081_988756_+\|sulfate-ABC-transporter-permease-subunit-CysT	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	5.60551e-119
CP018042.1\|AUL10630.1\|1003740_1004472_+\|pseudouridylate-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	7.73356e-72
CP018042.1\|AUL10633.1\|1010876_1011128_-\|hypothetical-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	2.42408e-12
CP018042.1\|AUL13152.1\|991539_992448_+\|sulfate-adenylyltransferase-small-subunit	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP018042.1\|AUL10632.1\|1009424_1010807_+\|multidrug-transporter	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	9.9815e-102
CP018042.1\|AUL10631.1\|1006248_1009428_+\|multidrug-efflux-RND-transporter-permease	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
CP018042.1\|AUL10622.1\|993935_995210_+\|radical-SAM-protein	gnl\|CDD\|275263	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B. Members of this family are the downstream member (B) of a pair of tandem-encoded radical SAM enzymes. Most of these radical SAM gene pairs have an additional upstream regulatory gene in the MarR family. Examples of high sequence identity (over 96 percent) from cassettes in several Treponema species of the oral cavity to those in multiple Firmicutes in the gut microbiome suggest recent lateral gene transfer, as might be expected for antibiotic resistance genes. The function is unknown.	4.71758e-24
CP018042.1\|AUL13154.1\|1004523_1005441_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.56316e-67
CP018042.1\|AUL10628.1\|999396_1000446_+\|aldo/keto-reductase	gnl\|CDD\|381320	cd19094, AKR_Tas-like, Escherichia coli Tas protein and similar proteins. Escherichia coli Tas protein is the prototype of this family. It is an NADP(H)-dependent aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NADP(H) as a hydride donor.	0
CP018042.1\|AUL10624.1\|995751_996624_-\|multidrug-DMT-transporter-permease	gnl\|CDD\|274527	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.	3.74356e-26
CP018042.1\|AUL10626.1\|997559_998246_+\|coenzyme-A-pyrophosphatase	gnl\|CDD\|239518	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.	2.60589e-72

>CP018042.1|AUL10625.1|996929_997310_+|50S-ribosomal-protein-L19
MNLIAILEQEEIARLTGGNAVTEFAPGDTVVVSVNVVEGTRKRVQAFEGVVIAKRNRGLNSSFIVRKISSGEAVERTFQLYSPQIAGIEVKRRGDVRRAKLYYLRSRSGKSARIKEKLVLKKAKSA
>CP018042.1|AUL10624.1|995751_996624_-|multidrug-DMT-transporter-permease
MSYTSLILVVLAAMAHAAWNLLAKRAAMVGPMFVFAYGLAATILYAPWVIWVLAHDGMVWSWPVVLCILASSMLHLGYSLCLQRGYQVADLSVVYPIARGTGPLLSTMGAFTLLSEPATTTGIAGMLCVVGGVLLIATQGRLGMFRQAQAWIGVRWGVVIGLFIAAYTVVDAYGVKILLIMPVLFDWFTCATRTLMMTPHVLRRRAQYWPAMRGYWHLAIAVGVLSPLGYILVLYALRNGAPLSLVAPAREMSMMLGTLAGMFLLREKVGIGRLAGCLAILAGVVLLGSS
>CP018042.1|AUL10623.1|995363_995744_+|hypothetical-protein
MTIATTLDAATSLPTAVPGRTLGALRRLARAWAGAAVPQRKWPFPPTPPGQAQPCTPCTDSQPRSVQAVQPAQARALHAQAELSGAATQAATQVLSTKAKIIDVLLVAVWGAMIPALMWLGAAGGF
>CP018042.1|AUL10622.1|993935_995210_+|radical-SAM-protein
MASTEHSFSAGFGSPAAAPAALRGRGAVTNVPHRFQQADRVRVDDGWANPDYTAGSDAAALPSVAEALGQGGRRAIPIAVEGADASPNTCAQAPAPRTIVQAEEARKMLSRNDSPDIPFDVAANPYRGCEHGCVYCYARPTHAYLGYSPGLDFETRLVAKANAVAALRAELARPGYRASPINIGSATDAYQPIERTWRLTRGMLELLLQTRHPLTVVTKNALVERDLDLLQDLARQKLVTVFVSITTLDAAMARTLEPRASAPYRRLQTVRTLAQAGVPVGVLVAPVIPFINDESLEHILQEASAAGACYASYTVLRLPWEVKEVFETWLQAHFPDRAQRVLHRIEDLRNGRRNDTAFGSRMRGTGIWADLLRQRFALATRKLDLNRHRPELDTHRFVPPLEPGLPPARGRREARAQPGQLALF
>CP018042.1|AUL13152.1|991539_992448_+|sulfate-adenylyltransferase-small-subunit
MSAVMTRSHLDWLESEAIFILREVAAECARPALLFSGGKDSVVLLRLAEKAFRPGRFPFPLLHIDTGHNYDEVISFRDARAAELGETLLVRSVEDSIARGSVALRRETDSRNAAQAVTLLEAIEELGLDACIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWNLFNTRVHRGENMWVFPISNWTELDVWQYIQRERLALPSIYYSHTREVVRRKGLLVPVTRLTPPAEGETVEQLAVRFRTVGDISCTCPVASDAADPAAIIAETAVTDITERGATRMDDQTSEASMERRKREGYF
>CP018042.1|AUL10621.1|989677_990742_+|sulfate-ABC-transporter-ATP-binding-protein
MSIEVRGLSKRFGAFRALDEVSLHIETGELVALLGPSGCGKTTLLRIIAGLESADAGSVLFAGEDATEVDVRQRQVGFVFQHYALFKHMTVFENVAFGLRVRHRSQRPSEARIRAKVLDLLGLVQLDWLADRYPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDELHVASVFVTHDQEEALEVTDRVVLMNAGRIEQVGSPREVWERPATPFVYGFLGDVNQLHGHATRGVWRLGEVALPAPDLPEADNQRAIAYVRPHDIDLARAGTAAPGIPVRLNHVYLAGPSAYLELARQDDQAIIEAQVPEPLFRSLGLKEGEALLAQPRRARVFAVQP
>CP018042.1|AUL10620.1|988870_989653_+|sulfate-ABC-transporter-permease-subunit-CysW
MFTEALRKGWQLYLAAIVEPDAWSAIRLTLLVAAIALPVNLVFGVAAAWAVTKFQFRGKQLLITLIDLPFSVSPVVAGMVFVLLFGSQGWFGPWLQDHDWKIVYAVPGVILATLFVTFPFIARELIPLMQAQGSEEEQAALTLGASGWQIFWRVTLPNIKWGLLYGAILCNARAMGEFGAVSVVSGQVRGLTNTMTLHVEILYNEYQFAAAFAVASLLALLALVTLAAKQVVEWRNQRLSPRQAEAPVHAGALAVRPAAA
>CP018042.1|AUL10619.1|988081_988756_+|sulfate-ABC-transporter-permease-subunit-CysT
MVASYRLTFGASLLAALVNLVFGTIVAWVLVRYRFPGKKIVDVLVDLPFALPTAVAGIALTALYSANGWLGAPLQRWFDLKVAFTPLGIVVALIFIGVPFVVRTVQPVLEDVERELEEAAASLGAGRWQTIRRVLLPALLPALLTGFALAFARAIGEYGSVVFIAGNMPMISEITPLLIISKLEQYDYAGAAAIATVMLALSFALLLVINLLQGWQTRRGGRQP
>CP018042.1|AUL10618.1|987856_988060_+|hypothetical-protein
MSLAIPSGPAPTAARRQRPGVLPGFGISMGYAVLYLSLLVLVLVLVLVLVPLAALPIKSLELGWAGF
>CP018042.1|AUL10617.1|986806_987841_+|sulfate-transporter-subunit
MPRNTAGIRGAIVALATVFSLGLPWAVQAQDKQTLLNVSYDPTRELYRAVDEAFIKEYQARAGVDLTVRQSHGGSGRQARSVIDGLDADVVTLALAYDIDAIADRGLLPQDWQKRLPRNSSPYTSTIVFLVRKGNPRQIHDWDDLVKDGVQVITPNPKTSGGARWNYLAAWAYALARNEGSEAKAREFVGQLLSHVPVLDTGARGSTTTFVERGVGDVLLAWENEAFLAREELGPDKFDIVVPSLSILAEPPVAVVDKVVDRKGTRAAAQAYLEYLYTPAAQEIIARNFYRPTDAGVAAKYASRFPKLKLVTIDDPIFGGWRKAQKDHFSDGGTFDQVYQPQRK
>CP018042.1|AUL10626.1|997559_998246_+|coenzyme-A-pyrophosphatase
MRPLFDPMAQPWETANQGLARVDERLLTPPELRSSLRPADHWRLDPLCAAEPRAPGREGSLVAAAVLIPLVMRADGVRVMLTQRAAHLHDHAGQVSFPGGRIEVSDATPVAAALREAQEETGLPVQQVEVLGSMPQYFTATGFAITPVVSLVQPDFELAPDAFEVAEVFEVPLSFLMDPANHRLYRAALPDGYVRQYYAMPWQRYFIWGATAGMLRNLYQTVREALPG
>CP018042.1|AUL10627.1|998341_999292_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP018042.1|AUL10628.1|999396_1000446_+|aldo/keto-reductase
MKYRKLGHTDLDVSLIGLGTMTWGEQNTEAQAHEQLDYALAHGINLVDAAEMYPVPPKPETQGRTESCIGSWLARTGRRHEVVLASKAAGPVRDAKRPSHIRDGKTFLDRKNLTQALDASLKRLQTDYLDLYQLHWPDRTTNTFGKLAYPWVDDAHTVPIEETLEVLQDFVRAGKVRHVGLSNETPWGVARFLQAAEKHGLPKVATIQNPYNLLNRIFEIGLAEFSHREGVGLLAYSPLAMGILSGKYLDGARPEGSRLALFTRFTRYSNPQAEAAARDYVMLARDHGLAPAQMALAWVNQRPFVSSNLMGATTLAQLKENIESVEVTLSDEVLQGIEAIHARQPNPAP
>CP018042.1|AUL13153.1|1000583_1001600_-|IS110-family-transposase
MADSSLLSAGGQVHVFIGIDVSKAKLDCTLLTAEADKCKTKVVVNTAAGVQALLAWCAKHGAQPAQLHAILEPTGLYHEQAATALPQVRVSLVNPAQARDFAKALALRSKNDALDSYVLARYGQTLSPALWHPAPLHARQLRALLTRREALSKDLLRELNRKEKSQFSPSAPLVDGSIDKAIAFLREQIKQIERAIDQHIDNHPDLKQDCELLNSIPAIGPQAGNAILAVMHNRHIDSAQSLAAYLGVVPVQRQSGSSLNSCARLSKAGPSQVRATLYMAALVGTRHNPHIRALYQRLLKAGKSKKAALGAAMRKLVHLCFGVLKNRIPYQPNYAMNG
>CP018042.1|AUL10629.1|1003108_1003681_-|chorismate--pyruvate-lyase
MTTPIPLARGWLPAAPSTLDPLRKYWLFRPGALTAGLRQLGHVRLRVLAEYPTGAPRDEADGMRIAAQSPVWVREVLMSIDGVDSVVARSLTPLRASHGVWQGMRRLLTRPLADMLYHDPGIHRSVFVCRRLAAGVPFHATAIARAPAGGPEPALWARRSAFWRAGQPLLVAECFLPAFWSLARAPVAPR
>CP018042.1|AUL10630.1|1003740_1004472_+|pseudouridylate-synthase
MEKVRISKLMSERGLCSRREADSYIERGWVRVDGVVVSELGARALPDQVITLERAAAARQTARVTILLHKPVGYVSGQAEKGYTPAVALIDARSRYAGDRAPQRFERGQLQGLAVAGRLDIDSQGLLVLTQDGRIAKKLIGEDSEVDKEYLVRVQGRLSEAGLALLNHGLSLDGKPLRPAQVRWQNADQLRFVLREGKKRQIRRMCELVGLRVVGLKRVRIGRVSLGDLPAGQWRYLRADERF
>CP018042.1|AUL13154.1|1004523_1005441_-|LysR-family-transcriptional-regulator
MELFVEVARTLSFGRAAENLAIPKSTLSRQVAELERSVGLRLLSRTTRRVELTEAGQLYFERCQRIVAEARIAHEELQNLVETPSGPLRVNMPADFGTDFLSEAFTEFSRRYPEVTFYLDLASPEHAERVFQTCDVSIEIGDLPDSTHIARLLGVLPAHLYASPDYLARHGEPQHPDDLPRHECIQFRAGTGRVTRWPLNSGERHVEITPGNRFSVNSVSMVRNLATLGAGIAILAPMGNVREDIESGRLKRILPDWLAGPFPVYAVTDTRMLPAKTRIFVEFLMERLSNKTLAGQNNPAFLNLR
>CP018042.1|AUL10631.1|1006248_1009428_+|multidrug-efflux-RND-transporter-permease
MAKFFIDRPVFAWVIAIVLMMAGALSILSLPVAQYPNIAPPAISINVTYPGASAQTVQDTVVQVIEQQMNGIDNLQYISSESNSDGSMSITLTFSQGTNPDTAQVQVQNKLAVAQPLLPLEVQQQGIRVTKATKNFLIVAGFVSTDGTMDKSDLADYVASYIQDPISRTPGVGNFQLFGAPYAMRIWISPEKLVNFGLTASDVTTAIREQNVQVSSGQLGGQPAVRGQQLNATVIGPSRLQTPEAFGRILLKVNRDGSQVRLKDVASIELGAQTYAIDSYYNGKPASGLAIKLASGANALDTAQAVRETINGLKPYFPPGMDVVYPYDTTPFVSLSIEGVVKTLFEAVLLVFLVMYLFLQNVRATLIPTLAVPVVLLGTFGVLAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLSPRQATRKSMGQITGALIGIAMVLAAVFVPMAFFGGSTGVIYRQFSITIVSSMVLSVVVAIVFTPALCATMLKPIPKGHHGSKKGFFGWFNRTFERSSQAYANNVARSMGRTKRLLLIYVVILLGMAWMFMRIPTAFLPDEDQGILFAQVQAPAGATSERTQATIDAAVKYLLEDEKESVASVFAVNGFSFGGRGQNAAILFIKLRDWNERKGAEHRAAAVAARANAKFRAELRDAQAAVFAPPAVMELGNATGFDFQLQDRAGVGHEKLLAARNQLLQEAGASPMLVAVRPNGIEDAPQYQLDIDREKARALGVSITEINNTLATAWGSSYVNDFIDRGRVKKVFVQGEASSRMLPQDLDKWYVRNNAGDMVPFSAFSSAQWTFGPQKLNRYNGVPSYNIQGQAAPGYSSGDAMAEMERLADKLPLGIGYDWTGLSFEERLSGAQAPALYAISLIVVFLCLAALYESWSIPTAVMLVVPLGVVGALLATMTRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKEHYEEGASLTEAAVHAARQRLRPILMTSLAFILGVVPLAISTGAGSGSQNAIGTGVIGGMLTGTFLAIFFVPLFFVLTLRLFKVKRASENREDDDPHGGAQPATHGGQPQ
>CP018042.1|AUL10632.1|1009424_1010807_+|multidrug-transporter
MKPVVMRTLLSLAVATALAGCSLAPTYERPQAPVDAAYPSGPAYGAPGQAAAGAPAAADVGWRDFFGDPLLQELLALSLANNRDLRVAALNVEAARLNPSGQAGISRSYQVGASLSTWELDLFGRIRSLSEQALQLYLAQDETRLATQLTLVAETANAYLTLRADQELLALTRQTLAAQQESYKLTRQSYDLGVATELDLSQAEISLRTAERNLSQYTRMAAQDRNALVLLVGQPLPAGIGAQLDQAVALPDGVVLADLPAGLPSDLLARRPDIRAAEHQLQAANASIGAARAAFFPRISLTGSAGTASASLGGLFDAGSGAWSFAPQISVPIFAGGALRASLDLAKIQKDIGIARYEQAIQSGFREVSDALAGRGTLQEQIRSQELLVQANQRAYDLSQQRYQQGIDNYLSVLDSQRSLYTAQQTLVETRLARLSNLIQLYKALGGGWSERTVAAAQAG
>CP018042.1|AUL10633.1|1010876_1011128_-|hypothetical-protein
MNIIIMIIVGFVVGLITRAIMPGDQNMGYIMTTILGIIGSVVAGFLGQQLGWYAPGEPAGWIGSVVGAIIVLFVVGLVAKKRA

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Crispr_ID: CP018042_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018042_4

1820755-1820882

Orphan

Consensus_repeat	Method
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP018042_4

>merge|CP018042|4|1820755-1820882|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCGTGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGCAAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

>CP018042|4|4|1820755-1820882|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	TGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGC
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP018042.1\|AUL11250.1\|1822964_1825001_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
CP018042.1\|AUL11246.1\|1819344_1819704_-\|hypothetical-protein	unknown	unknown	unknown
CP018042.1\|AUL11255.1\|1828151_1828475_+\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|213674
CP018042.1\|AUL11245.1\|1818445_1819348_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018042.1\|AUL11242.1\|1814769_1816755_-\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	unknown	unknown	gnl\|CDD\|274868
CP018042.1\|AUL11243.1\|1816963_1817200_+\|hypothetical-protein	unknown	unknown	unknown
CP018042.1\|AUL11238.1\|1809659_1810772_+\|alkene-reductase	unknown	unknown	gnl\|CDD\|239243
CP018042.1\|AUL11244.1\|1817544_1818030_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
CP018042.1\|AUL11256.1\|1828477_1828990_+\|Fe-S-protein-assembly-co-chaperone-HscB	unknown	unknown	gnl\|CDD\|235133
CP018042.1\|AUL11249.1\|1821684_1822887_-\|aromatic-amino-acid-aminotransferase	unknown	unknown	gnl\|CDD\|181731
CP018042.1\|AUL11241.1\|1812658_1814764_-\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	unknown	unknown	gnl\|CDD\|274867
CP018042.1\|AUL11254.1\|1827739_1828150_+\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087
CP018042.1\|AUL11257.1\|1829119_1830982_+\|Fe-S-protein-assembly-chaperone-HscA	unknown	unknown	gnl\|CDD\|235360
CP018042.1\|AUL11240.1\|1811395_1812655_-\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	unknown	unknown	gnl\|CDD\|236882
CP018042.1\|AUL11252.1\|1825960_1826473_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|273927
CP018042.1\|AUL11239.1\|1810776_1811415_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372868
CP018042.1\|AUL11251.1\|1825253_1825745_+\|protein-tyrosine-phosphatase	unknown	unknown	gnl\|CDD\|319971
CP018042.1\|AUL11247.1\|1819749_1820679_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|273608
CP018042.1\|AUL11248.1\|1820905_1821556_-\|repressor-LexA	unknown	unknown	gnl\|CDD\|234688
CP018042.1\|AUL11253.1\|1826490_1827702_+\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450

Protein	Function_ID	Function_description	E-value
CP018042.1\|AUL11250.1\|1822964_1825001_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP018042.1\|AUL11255.1\|1828151_1828475_+\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|213674	TIGR02011, Protein_yfhF., iron-sulfur cluster assembly protein IscA. This model represents the IscA component of the ISC system for iron-sulfur cluster assembly. The ISC system consists of IscRASU, HscAB and an Isc-specific ferredoxin. IscA previously was believed to act as a scaffold and now is seen as an iron donor protein. This clade is limited to the proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	4.04388e-54
CP018042.1\|AUL11242.1\|1814769_1816755_-\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	gnl\|CDD\|274868	TIGR03939, PGA_TPR_OMP, poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA. Members of this protein family are the poly-beta-1,6 N-acetyl-D-glucosamine (PGA) export porin PgaA of Gram-negative bacteria. There is no counterpart in the poly-beta-1,6 N-acetyl-D-glucosamine biosynthesis systems of Gram-positive bacteria such as Staphylococcus epidermidis. The PGA polysaccharide adhesin is a critical determinant of biofilm formation. The conserved C-terminal domain of this outer membrane protein is preceded by a variable number of TPR repeats.	1.10027e-119
CP018042.1\|AUL11245.1\|1818445_1819348_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	5.13866e-23
CP018042.1\|AUL11256.1\|1828477_1828990_+\|Fe-S-protein-assembly-co-chaperone-HscB	gnl\|CDD\|235133	PRK03578, hscB, Fe-S protein assembly co-chaperone HscB.	2.55481e-79
CP018042.1\|AUL11238.1\|1809659_1810772_+\|alkene-reductase	gnl\|CDD\|239243	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.	0
CP018042.1\|AUL11249.1\|1821684_1822887_-\|aromatic-amino-acid-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
CP018042.1\|AUL11241.1\|1812658_1814764_-\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	gnl\|CDD\|274867	TIGR03938, hypothetical_protein_Pcar_2791, poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB. Two well-characterized systems produce polysaccharide based on N-acetyl-D-glucosamine in straight chains with beta-1,6 linkages. These are encoded by the icaADBC operon in Staphylococcus species, where the system is designated polysaccharide intercellular adhesin (PIA), and the pgaABCD operon in Gram-negative bacteria such as E. coli. Both systems include a putative polysaccharide deacetylase. The PgaB protein, described here, contains an additional domain lacking from its Gram-positive counterpart IcaB (TIGR03933). Deacetylation by this protein appears necessary to allow export through the porin PgaA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
CP018042.1\|AUL11254.1\|1827739_1828150_+\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	5.84746e-99
CP018042.1\|AUL11257.1\|1829119_1830982_+\|Fe-S-protein-assembly-chaperone-HscA	gnl\|CDD\|235360	PRK05183, hscA, chaperone protein HscA; Provisional.	0
CP018042.1\|AUL11240.1\|1811395_1812655_-\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	gnl\|CDD\|236882	PRK11204, PRK11204, N-glycosyltransferase; Provisional.	0
CP018042.1\|AUL11252.1\|1825960_1826473_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|273927	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR. This model describes IscR, an iron-sulfur binding transcription factor of the ISC iron-sulfur cluster assembly system. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Regulatory functions, DNA interactions].	1.00126e-77
CP018042.1\|AUL11239.1\|1810776_1811415_-\|hypothetical-protein	gnl\|CDD\|372868	pfam13994, PgaD, PgaD-like protein. This family includes the PgaD protein from E. coli. The homopolymer poly-beta-1,6-N-acetyl-D-glucosamine (beta-1,6-GlcNAc; PGA) serves as an adhesin for the maintenance of biofilm structural stability in eubacteria. The pgaABCD operon is required for its synthesis and export. It has been shown that PgaD is essential for this process.	0.00341018
CP018042.1\|AUL11251.1\|1825253_1825745_+\|protein-tyrosine-phosphatase	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	1.04407e-74
CP018042.1\|AUL11244.1\|1817544_1818030_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	7.77331e-19
CP018042.1\|AUL11247.1\|1819749_1820679_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	gnl\|CDD\|273608	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain. A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	4.98806e-78
CP018042.1\|AUL11248.1\|1820905_1821556_-\|repressor-LexA	gnl\|CDD\|234688	PRK00215, PRK00215, transcriptional repressor LexA.	1.25833e-105
CP018042.1\|AUL11253.1\|1826490_1827702_+\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0

>CP018042.1|AUL11247.1|1819749_1820679_+|autotransporter-outer-membrane-beta-barrel-domain-containing-protein
MPRSGILTAPVLAVLGTASAPQGIWQAEMNALSKRMGELRLTPAAGGVWARSFAQRQRLDNQVVDRFTQTVGGIEIGADTALPAAEGRWHVGAVAGYSRARRKLAHSARGNSDSLHVGAYATYIGDGGFYLDGIVRVNRYEHDFRADGQRGARVTGKYRANGIGLSLETGRRFTWAGDWFVEPQVEVALFRSGGADYTASNGVRVDVASTKSLLGRAGLQVGRKLDLGNGKLVQPYAKLSWLQEFDGVGKVRTNDIGHDVKLRGGRAELDLGVAAALGRHSSLFASYEYSKGSRLTIPWSFHVGYRYAW
>CP018042.1|AUL11246.1|1819344_1819704_-|hypothetical-protein
MRLVLRPGSRLGARLPLRTRFRLRSGFHPRPGFHLSSGLCIGLGIGIGRGQALRPLLGRVGPRLRRLFGRRRQPAVLAIDGSAVQLGTRNIDVGPAIVDGRAIEIYRCPAVFIVDGPAI
>CP018042.1|AUL11245.1|1818445_1819348_+|IS481-family-transposase
MVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP018042.1|AUL11244.1|1817544_1818030_+|MarR-family-transcriptional-regulator
MPASQDKPDVPPGPYHFSEQVGHLLRRAYQRHVAIFQQTIPDSKLTAAQFVVLCALRDQGACSLVDVVKATAIDQATVRGVIERLKARKLLAVSHDPADRRKVLVTLTPDGRALVEEMVPFAEQITQSTFGGLNPAERVAIVYLLRKMSDADDLVGRQSES
>CP018042.1|AUL11243.1|1816963_1817200_+|hypothetical-protein
MRRAAKWWGPAATWTLAALLVLLVGHGVVPEAARVSDAPLLHAMAGHAYLLNWAAGLMALIGWGDSLVLYRRTRRRAV
>CP018042.1|AUL11242.1|1814769_1816755_-|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA
MNNDQTRRTRPASVRGLRRTRLLVAGLAFVGAAAAAAPSVRDQVQEASRSGAANLALDLATEHRALFTPLEYAQLQHAAIAQRLRWSRAETWNLTGPERFATLDAALADGWQLLDSLPLAPEYASLRTAVISDMIYGLGLRGRYADAIKLYEGLRATNTPVHPYVLVSAGNAYAYEERYDEAIVCYEEALAKAGPGDIDRVPTQESLFFAYMDRGRYEDAEQLLQRIEKTSPQYVENAPVAERPNEDYATAQRLRAQYLMYSGETEAGTLAIDALQHDAPFSSGLRNAAASARLGDARPREAKAAFTTALAERPDDIQAMTGLARASMALREYPEAEAIVTTLSERFPESSSVRNLQRDYEVYQSPLLTMDFGGDIGHGGDNSNNDNSTIANREWSLNTMLYTSPISHNYRLFFHQFTGYADLGDGHKSRVRNGAGLEYRRGSIEASTELHQSTGPSGRFGASANVAWLPSDGWRLAANFDSDSNDLPWKAYRAGIHGWSSGVSARYQPTERTYYDVAYQLQHYSDSNTRQTIGATWFQNLWTVPRHSVSTWTSVAYSNNSKTDTECFSPDHDLTAQVTAMYEWRPWRDGQYAFRQRVYATGGVYNQAEHGNSALWQLRLEQVWDLPRQTSITYGVGYGRHSYDGDPENRTLFYLTLNIPF
>CP018042.1|AUL11241.1|1812658_1814764_-|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB
MTAMHRTLLKWFACCALGLLMLPARAYKVDMLPPPDPDDGLTFRVLCMHDVRDNLRASFADMPDQFAIETRTLTDLFEWIRVKGFNLISMQQIIDSRAGVRPLPPRPILLTFDDGYASTYTKVFPLLKKFNYPAVVAVVTSWTDAPAGTKIRLSPKIEVPHDFFMTWAQLREMAQSGLVELASHSHNLHRGVLANPQGNEQPAASSRQYLPASGRYENDAEYRARVRQDLKTSADLIREHTGVTIRSIVWPYGAHNRDTDQVAAEVGLNIGLTLQPGPNTPDVSLTQIRRSLVDYEVNVATVARAMREPVSYHGQVRPIERIVQVDLDYIYDPDPEQQNRNLGQLIDRMKDLAPSAVYLQAFAYPKGDGDITEVYFPNRHLPMRADLFNRVAWQLKTRAGVMVYAWLPVLTFSVPPGNPAYGKVVQSTTRKPGERGLGSPTRLSPFHPDAHRVISEIYEDLAKAAHFDGLLFHDDAVLDDTEDSSPEALATYQGWGLPPDIAAIRADPKLAQQWSKGKIRYLIDFTMHLRHIVSGYQNDRDMVVARNLYAQPVLDPVSEAWYGQSLPEFLKSYDFVALMAMPNMEGAARPEQWMRQLVAAVARQKGLDRTIFELQARDWRVGKPIDTEILRKQMVQLRSLGAINYGYYPDDFIANHPDAEVLRDVMSLKSTLEKRRLTKAQELSRQTTLYGSASQAEPTQR
>CP018042.1|AUL11240.1|1811395_1812655_-|poly-beta-1,6-N-acetyl-D-glucosamine-synthase
MNDSVKSVLSSFVFYYPFFMSYFWIVGGLLHFFLFEQGRKHRATLLPRVPRVAIVVPCYNEGENVAEVIAHLDRMHYPNYRIIAVNDGSRDNTGALLNELAEQYPRLLVVHQSRNEGKAIGLNTAAQLSDAEFLLCIDGDSLPHPDSITYMLTHFLHAGHVGAVTGNPRIRNRSTVLGRMQVGEFSSIVGLIKRTQQLYGKLMTVSGVMTMFRKQALHQVGYWSPDMQTEDIDISWKLQLAGWTLRYEPRALTWILMPETFRGLFKQRYRWARGGIETALKYAPRMLNPRQILMWPIFLEFSLSVLWAYAMLFLICMAVLGQFVALPPAWQFEIFPRWHGTLLFLTCLAQLFAGCIVDRAYDYRIFRYFADAVWYPIAFWIIGMITTVFALPRVLFRRAQSRARWVSPDRGIKHESVDH
>CP018042.1|AUL11239.1|1810776_1811415_-|hypothetical-protein
MKALIIDISASPLREYVHQHGVADGLLYGCWYRIVRPLLVILTWVAFSLYIHHSLVTVGGTAAQIAELLVYITVVATMAAALTAWMIVCRFHGWIRARDNEEVGVGLDPEYALPPRWPLPEGANRLLVDHDEAGAIVQVSAWYVPAAIEPVVAAAMASAVMPEAAPLSEPAPVAAALPDEADELAAWSGPPMQRQPDGRIEPTLHDGRALTL
>CP018042.1|AUL11238.1|1809659_1810772_+|alkene-reductase
MSTLFQPLNAGKLRLANRIVMAPLTRNRSPNAVPPPLTATYYAQRASAGLIITEATAISHQGQGYADVPGLYAPEQLAGWRRVTDAVHAAGGTIVVQLWHVGRISHTTLQPGQGAPVAPSAIRAQARTYLVDAQGKGQFADTSEPRALALDELPGIVEDYRRAARAAIDHGFDGVELHAANGYLLDQFLRSGSNHRDDAYGGSIENRARLLLRALDAVCAEVGADRVGIRLSPVTPANDAHDDQPQPLFEYVLRELARRGLAYVHVIEGATGGDRAYQQGPAPFDYAALKAAYRAAGGAGAWMVNNGYDISLAEQKLSSGQADLVAFGKPFIANPDLVARLRQGAALNEGDRDTFYGGGERGYTDYPALA
>CP018042.1|AUL11248.1|1820905_1821556_-|repressor-LexA
MATKLTERQQEILDLIRQTVARTGFPPTRAEIAQALGFRSPNAAEDHLKALARKGAIELTAGASRGIRLKVPDSATPSAQLTHPLLAQLVLPLVGRVAAGSPILASEHVEREVGVDPGLFAQTPDYLLKVRGMSMRDAGILEGDLLAVKRAAEARNGQIVVARLGDEVTVKRLQRQNGRIELLPENPDFAPIVVANTDEFALEGIAVGLIRTQPLH
>CP018042.1|AUL11249.1|1821684_1822887_-|aromatic-amino-acid-aminotransferase
MSTLFASVELAPRDPILGLNEQYNADTRPGKVNLGVGVYYDDEGRIPLLQAVRKAEVARIEAAAARGYLPIEGIAGYNKGAQALLLGADSPLAAEGRVLTAQALGGTGALKIGADFLRQLLPQSKVLISDPSWENHRALFERAGFPVETYAYYDAATHGLNFEAMLAALQAAPEQTIVVLHACCHNPTGVDPTPQQWEQIAAVVKARNLVPFLDIAYQGFGEGLEQDAAVVRMFAELDLTMFISSSFSKSFSLYGERVGALTVVAGSKDEAARVLSQLKRVIRTNYSNPPTHGGTVVSTVLNTPELFALWENELAGMRDRIRLMRKELVEKIKTQGVAQDFSFVLAQRGMFSYSGLTAAQVDRLREEHGIYAVSSGRICVAALNSRNIDAVAAGIAAVLK
>CP018042.1|AUL11250.1|1822964_1825001_+|excinuclease-ABC-subunit-B
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVTGSGKTYTMANMIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRTGDRISRREVLARLVAMQYTRNDADFTRGVFRVRCETIDIFPAESPELALRLTLFDDEIESLELFDPLTGRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMYRGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHADNVVEQVVRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVLVTTLTKRMAEDLTDFLSEHGVRVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKAVRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNLEFEQAAAARDALNALKSRLLLDGVGWSG
>CP018042.1|AUL11251.1|1825253_1825745_+|protein-tyrosine-phosphatase
MMTKVLFVCMGNICRSPSAEGVFRYLVNDAGMGDVVRVDSAGTHAFHIGEAPDARAQAAARKRGYDLTHCAARQVTADDFREFDLILAMDWDNLAALQQQCPKAYQHKLMLLMRFANEFEEATVPDPYYGGPEGFGKVLDYLEDACQGVLELVRKRATQYQAA
>CP018042.1|AUL11252.1|1825960_1826473_+|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MRLTTKGRFAVTAMIDLAMRQHSGPVTLAAISQRQNISLSYLEQLFGKLRRHELVDSVRGPGGGYSLARLARNVTVADIIFAVDEPLDATSCGGKRDCTSGNDGKPGKCMTHELWTTLNRKMVDYLDSVSLQDLVDQQRVRQLQEAANQAQGCSAVRVNRSTPVAANATA
>CP018042.1|AUL11253.1|1826490_1827702_+|IscS-subfamily-cysteine-desulfurase
MSNRPIYLDYSATTPVDPSVVEKMIPWLYESFGNPASRSHAFGWEAEDAVEKAREEVAKLVNADPREIVWTSGATESDNLAIKGAANFYAERGKHIITVKTEHKAVLDTCRELERQGFEVTYLDVQDDGLLSLDAFKAALRPDTILVSVMMVNNEIGVIQDIAALGEICREKGIIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRVRIEAQMHGGGHERGFRSGTLATHQIVGMGEAFRLAREEMGTENERVRMLRDRLLAGLTQIEEVYVNGSMEHRVPHNLNISFNYVEGESLIMAIKELAVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTLGRFTTEQEIDFTIELIKSRVGKLRDMSPLWEMAQEGIDLNSVQWAAH
>CP018042.1|AUL11254.1|1827739_1828150_+|Fe-S-cluster-assembly-scaffold-IscU
MAYSSKVLDHYENPRNVGSFDKGDDSVGTGMVGAPACGDVMKLQIKVNEAGVIEDARFKTYGCGSAIASSSLVTEWVKGKTLDEAMNIRNTQIAEELALPPVKIHCSILAEDAIKAAVQDYKTKHGAETPEAVAAN
>CP018042.1|AUL11255.1|1828151_1828475_+|iron-sulfur-cluster-assembly-protein-IscA
MAVTLTQSAANHVGRYLQKRGKGIGLRLGVRTTGCSGMAYKLEYVDEQAADDVVFDSFGVKVFIDPKSLAYLDGTELDYAREGLNEGFRFSNPNEKATCGCGESFTV
>CP018042.1|AUL11256.1|1828477_1828990_+|Fe-S-protein-assembly-co-chaperone-HscB
MAADDHFSLFGLPTRFALDPVQLEQAWRAVAARVHPDRYATASAAERRVAMQWAARANEAYRQLRDPMLRARYLCEQAGVDLQTESNTAMDPAFLMQQMEWREMLDDARRDPAAFAALRAELEQARLRMQQTLSELIDERGDYQQAGTKVREWMFVEKLAQELSAAQPMQ
>CP018042.1|AUL11257.1|1829119_1830982_+|Fe-S-protein-assembly-chaperone-HscA
MALLQISEPGDSPAPHQRKLAVGIDLGTTNSLVAAVRSSVPEVLADAQGQVLLPSAVRYLDGGAVRIGREALLEQARDPLNTIVSVKRFMGRSAADAAASGAPYEFVDAPGMVRLRTVQGDLSPVEVSAQILAVLRQRAEDVLGDDLVGAVITVPAYFDDAQRQATRDAARLAGLNVLRLLNEPTAAAIAYGLDQAAEGIYAVYDLGGGTFDISILRLTQGVFEVIATGGDTALGGDDFDSAIVAHACAGEDVAALPVADRRALLVAARAAREALTDQAQAPFEVTLRDGRAIQATLTRAQFEQLAEPLVGRTLDSARRALRDAGLAVGDVRGVVMVGGATRMPVVRQQVGALFGTEPLTNLDPDQVVALGAALQANLLAGNRALGEDWLLLDVIPLSLGLETMGGLVERIIPRNSTIPVARAQEFTTFKDGQTAMSVHVVQGERDLVSDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLSVTAREQSTGVEAAVAVKPSYGLSDDEIARMLADSVTQADSDARARMLREQQVEARQLVESVGAALAADGDLLDPAERATVDQRLQAAAQAQSLDDVEAVRAAVQALSDATEEFAARRMDRSIRSALAGRKLDELA

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Crispr_ID: CP018042_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018042_5

3435492-3435601

Orphan

Consensus_repeat	Method
TTGACTGCCAAGACGGTATCTGTCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP018042_5

>merge|CP018042|5|3435492-3435601|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCCGCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGCTTGACGGCCAAGACGGTATCTGTCCCC

>CP018042|5|5|3435492-3435601|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCC	GCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGC
TTGACGGCCAAGACGGTATCTGTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP018042.1\|AUL12539.1\|3446865_3447744_+\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|178806
CP018042.1\|AUL12521.1\|3422159_3425138_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375438
CP018042.1\|AUL12525.1\|3428890_3429841_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018042.1\|AUL12524.1\|3427289_3428792_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235866
CP018042.1\|AUL12523.1\|3426978_3427311_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235866
CP018042.1\|AUL12530.1\|3433453_3434239_+\|enoyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|180789
CP018042.1\|AUL12532.1\|3436132_3436813_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377342
CP018042.1\|AUL12522.1\|3426064_3426943_+\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126
CP018042.1\|AUL12536.1\|3441040_3442465_+\|ATPase	unknown	unknown	gnl\|CDD\|236531
CP018042.1\|AUL12526.1\|3429837_3430305_-\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
CP018042.1\|AUL12531.1\|3435602_3435995_-\|osmotically-inducible-protein-OsmC	unknown	unknown	gnl\|CDD\|224679
CP018042.1\|AUL12528.1\|3431138_3431939_+\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
CP018042.1\|AUL12534.1\|3437884_3438787_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP018042.1\|AUL12537.1\|3443534_3444875_-\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
CP018042.1\|AUL12535.1\|3440339_3441041_+\|two-component-system-response-regulator-OmpR	unknown	unknown	gnl\|CDD\|181883
CP018042.1\|AUL12540.1\|3447856_3448672_+\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|225447
CP018042.1\|AUL12533.1\|3436817_3437789_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP018042.1\|AUL12538.1\|3444990_3446754_+\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP018042.1\|AUL12529.1\|3431949_3433359_+\|lytic-transglycosylase	unknown	unknown	gnl\|CDD\|182727
CP018042.1\|AUL12527.1\|3430347_3431118_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777

Protein	Function_ID	Function_description	E-value
CP018042.1\|AUL12539.1\|3446865_3447744_+\|septum-site-determining-protein-MinC	gnl\|CDD\|178806	PRK00030, minC, septum site-determining protein MinC.	3.47756e-166
CP018042.1\|AUL12521.1\|3422159_3425138_+\|hypothetical-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.32844e-07
CP018042.1\|AUL12525.1\|3428890_3429841_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23
CP018042.1\|AUL12524.1\|3427289_3428792_+\|hypothetical-protein	gnl\|CDD\|235866	PRK06816, PRK06816, StlD/DarB family beta-ketosynthase.	1.41176e-131
CP018042.1\|AUL12523.1\|3426978_3427311_+\|hypothetical-protein	gnl\|CDD\|235866	PRK06816, PRK06816, StlD/DarB family beta-ketosynthase.	8.20524e-38
CP018042.1\|AUL12530.1\|3433453_3434239_+\|enoyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|180789	PRK06997, PRK06997, enoyl-[acyl-carrier-protein] reductase FabI.	1.22848e-177
CP018042.1\|AUL12532.1\|3436132_3436813_+\|hypothetical-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	5.6465e-62
CP018042.1\|AUL12522.1\|3426064_3426943_+\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	2.20669e-12
CP018042.1\|AUL12536.1\|3441040_3442465_+\|ATPase	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.78414e-42
CP018042.1\|AUL12526.1\|3429837_3430305_-\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.07937e-102
CP018042.1\|AUL12531.1\|3435602_3435995_-\|osmotically-inducible-protein-OsmC	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	4.86152e-16
CP018042.1\|AUL12528.1\|3431138_3431939_+\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	2.85848e-146
CP018042.1\|AUL12534.1\|3437884_3438787_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	4.1334e-23
CP018042.1\|AUL12537.1\|3443534_3444875_-\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.21087e-123
CP018042.1\|AUL12535.1\|3440339_3441041_+\|two-component-system-response-regulator-OmpR	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.05363e-90
CP018042.1\|AUL12540.1\|3447856_3448672_+\|septum-site-determining-protein-MinD	gnl\|CDD\|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	7.6448e-163
CP018042.1\|AUL12533.1\|3436817_3437789_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	2.71001e-129
CP018042.1\|AUL12538.1\|3444990_3446754_+\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP018042.1\|AUL12529.1\|3431949_3433359_+\|lytic-transglycosylase	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	5.28635e-76
CP018042.1\|AUL12527.1\|3430347_3431118_-\|SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.0439e-10

>CP018042.1|AUL12530.1|3433453_3434239_+|enoyl-[acyl-carrier-protein]-reductase
MGFLAGKRILMTGVLSNRSIAYGIARACRDQGADLAFTYVGDRFKERITEFAASFGSDIVLPCDVAEDSQIDAAFAELGKRWDGLDGLVHAIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPAMAKAALPLMEGRKGSVLTLSYLGSERVVANYNTMGLAKASLEASVRYLATALGPRGIRANAISAGPIKTLAASGIKDFSSILKFVEANAPLRRNVTIEDVGNVAAFMLSDLAAGITGEITHVDAGFSTVVPGMEN
>CP018042.1|AUL12529.1|3431949_3433359_+|lytic-transglycosylase
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRGFAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVESAYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKFAVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLLPADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVAADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
>CP018042.1|AUL12528.1|3431138_3431939_+|hydroxyacylglutathione-hydrolase
MQTAPPLSAVVPLPAFSDNYIWALAHEGQAAVVDPGDAAPVLRWLRATGATLRAILLTHHHPDHVGGVLELVQATGATVYGPAGETLPHCDVRLAEGDRVTLPELALALEVLDVPGHTAGHIAYTGRAAGVERVLFCGDTLFAGGCGRLFEGTPAQMLDSLEKLSALPADTQVCCAHEYTLANLRWALAVEPANRTLQQWYQRAQELRNEGTPTLPSTIGQERETNPFLRTPHAAVAHAAAVWSGRSLATPVEVFAALRQWKNNFK
>CP018042.1|AUL12527.1|3430347_3431118_-|SAM-dependent-methyltransferase
MAEETPPIVELAEWFQTPPGQYVLAWEQAQFDEAVADIFGYYAWQVGLAEPNLLRANRMPFKAWVGAGVPPPELAQGWQACVAAAPEALPFESQSVDLLVLPHAFECAEAPHLVLREVERVLVPEGRVVISGFNPWSLWGARNLMPGMEAWLPLPLSAQVALPRLKDWFKLLSFEVERGRFGCYAPACRTDKWLRRWRFMERYGQRWWGLGGAVYVVTATKKVAAMRLIGPAWKTRRKRAQAASVVVNRQADDPGR
>CP018042.1|AUL12526.1|3429837_3430305_-|ribonuclease-HI
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR
>CP018042.1|AUL12525.1|3428890_3429841_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP018042.1|AUL12524.1|3427289_3428792_+|hypothetical-protein
MPGFANMIQGELSAAPLETLSVHGICAAGVGAIQAAAQGIELGAHRRALAVASELPSRLFKRSRFAAPGYDAHFLRWMLSDGAGAMLLGDASQPLAGAANGVRLRLKWIHQRSFSGDYPVCMQLGQSAGGQAHLDYGSWSEAEAAGALLLRQDILLLPHLFDIGIHEYAKLVHDGWVDPRQVSHFLCHYSSEKFIPVVEDLMDKAGLAIARERWFSNLAWRGNTGAASILIMLAEFLQTRTVQPGEQIFCYIPESGRFMAAYMLLQAEGPDETAQPARARAVPAAAPAGEADFIAPPHDPAHAPQGLEPLLGELAAIITKGSIFSAHGRFRCGCLPGKRSASHGRGAPGPAGRMDRGILPVVGNCGAARLARVPCRTTIRRSAAHRMRPQGDKSMCATAVDTGMEFDYIIVGAGSAGCVLANRLSADPSVRVLLLEAGGADSWHWIHIPVGYLYCIGNPRTDWCYRTQADPGLNGRSLGYPRGRVLGGSSPINGIIYMRG
>CP018042.1|AUL12523.1|3426978_3427311_+|hypothetical-protein
MPVAFDRVYLHSAGYFMPGEPVDNDAMDQYIAPLNRISGRIKNRILAENGIRQRYYAIDPEGRTRWSNAQLAAQAIQACLARGATSTCHRSRCWPAARRAAIRSCPGSPT
>CP018042.1|AUL12522.1|3426064_3426943_+|fatty-acid-desaturase
MVRPAEWLRHRRDWQSVLYLAALPALAAWQWVHGWHWALYAPMLFLTLGVGVIHHNHAHRRMWRPRWLNRLTDFWLTLLQGHPTFVFHAAHNANHHRYKHGPRDVARTYRFGGDTNHLAGYLLHPLQAVVVLYPLFLASLRRLRSRRPGVWRYCLRQYAAWLGLWGGLLALDPGKAFWLVIVPQLHGLHWLLATNYLQHAHADGGPGRHAALSYARNFEGWVNPLLFNIGLHTAHHENPRAHWSELRALHWQHYRDRVPSRLNERGLAPYMARVFVLGLFSRRCRTHTLMRP
>CP018042.1|AUL12521.1|3422159_3425138_+|hypothetical-protein
MQLWLPDGTATSVRANAAGGFEASSAGDMTSGLIRARATDRYGDTSQEVTYAYTDTVDKTAPVLSIAGVATDEATGRVTVTGRSEPDAQVTIRFPGGGRKTVRADANGAYRVRSDGDLPAGVIVVQAADAAGNSTQAQQAYQDTVDRTAPEPVQIALDTDAATGRLTVSGQAEPGGSVTVTWPDGTTQTVRVDADGGFRVTSAGDAAQGDVVVVVADQAGNRAAPVRAHYADPVDRTAPMTPTVRHATDAQTGRVTVMGRTEAGALVTVQFPDGSSKTVRAQNDGGYAATSDTDMVSGPIVVSAGDADGNRTPAQQVMYTDTLDKTAPASPSLTVREDAASGRATVTGQAEPGAAVRVVFPNGEAQTVTAGSDGAYSVTSTADMVAGEITVVAADASGNQSAPARTVFADAVDKTAPAAPTLALSEAADSGRLTVSGRTEPGASVRVTFPDGETVTVTAKADGTYTATSRADMIGGNVTVVATDTAGNAAAPVRAAYADTVDRTPPVLDTPVLNVASDSGRVTVTGVTEPGARVQVAIPGESLQTVTADSAGRYRAVSPGDVLQSGTVRVIATDAHGNASAPRDVPYQDAVDRTAPPLTIEAAVEQARTGVVNVSGKTEPNLMVSATFPDGQTAQARADGQGRYQLASPADVARSGRIAVSASDAAGNRAAARAEFTDQVDKTAPAVTIRAVTEQAGTGVATVSGATEPGATVSVTFPDGQVARATADRSGAYTVHSARDVTARGNISVIATDAAGNASPSVSRQFSNTVADTVPPSLTIAMVTTDPGNGRITVSGVTEAGARVHVVFPGGASDTVTADSKGGYRATSAGDVGSGAVTAQATDASANRSPLKTYAYTDAWQPRQLSAKDFSQSRYFVPLTTRGGTDNEPLLRITTNQQIPTAELRVALKPYKTEDRAGRLVREAITLKWGNAPGVGGDARALHFYVPDSAKAKLRKELTEVERSNDYKFWIEFTDTRFGGVARLYIKVISTL
>CP018042.1|AUL12531.1|3435602_3435995_-|osmotically-inducible-protein-OsmC
MTIQVRANTPGGLQYTATAEGHELPLAMPQPQGEGPDPHDYFDTALGGCKALTLMVYAQRKGLPLQAVDVDVVRDASEERKGIYRLTAKLKLHGDLDDAQIDELLKVADKCPLHKLMTATDIQVSTIVVE
>CP018042.1|AUL12532.1|3436132_3436813_+|hypothetical-protein
MSARQLLDQLLQSGQSLMQGAGAQAQQATQGGKGTFLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMAALGALAYRAYDQYQRNQAGGAAAPAPQTLDRLPPAPAEQHSNAVLVAMIGAAKADGHIGPDERQLLETELAKLSGDAGDRAWLEAELARPLDPAVIAQQARTPEMGAEMYLASLLVADEQSFMERAYLDELARQLKLPAELKQQLEAQVPAAA
>CP018042.1|AUL12533.1|3436817_3437789_-|ABC-transporter-substrate-binding-protein
MKSQVSILLAGCLLGAGAAAAQAPATYPDHAITIVVTFPPGGGTDLLARKLGAAMQQRLGQPVVVENRPGASGNIGARAVAEARPDGYTLLMVNSSFAVNPGVFRNLDFSPTRDFTAVINVAYVPSVIVTAEPAGDAGLPERLRQADTQSRTLAFASCGNGTPQHLAGEMLRQASGAWLQHVPYRGCGPALTDVLSRQVPLGIVTASSAAPFIHAGKLRALAVTSAQRSPLLPDVPTVAEQGAPGYELDQWHGLLAPAGTPPAVIQRLYEALSAIVAEPAMRRELESLGFNPVSEGPERFEALVQADIARFAALTARMGLRAD
>CP018042.1|AUL12534.1|3437884_3438787_-|IS481-family-transposase
MVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWQRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP018042.1|AUL12535.1|3440339_3441041_+|two-component-system-response-regulator-OmpR
MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARITRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGEINLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQTVWGIGYRFSP
>CP018042.1|AUL12536.1|3441040_3442465_+|ATPase
MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMEDVAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQEDEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAPSPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLADAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMAVLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSGGLLVRITLPLAKA
>CP018042.1|AUL12537.1|3443534_3444875_-|cytochrome-ubiquinol-oxidase-subunit-I
MNIPPLLLARAQFTASLGFLALFLAISLALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMDKIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVLALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAEPELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLRLALGLGLLMLAASCATLALTCRRGFDPVALPRWWLRVLSLLMFAGALGVVATWCYDLAGMQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRKTGGSS
>CP018042.1|AUL12538.1|3444990_3446754_+|glutamine--tRNA-ligase
MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQGQPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVDAIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRGTLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPDGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNRIVTLRDSWQAA
>CP018042.1|AUL12539.1|3446865_3447744_+|septum-site-determining-protein-MinC
MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFFENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEGANLQGARDAGLVPVELSTSVARAPQVIDTAPPNDVATPVPSVPEATAEATAKAGPQDDEADGEQADEAPAHNPESVPTRAARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNVHVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLDGDTLRIEALKG
>CP018042.1|AUL12540.1|3447856_3448672_+|septum-site-determining-protein-MinD
MTRIVVVTSGKGGVGKTTTSASFSAGLAMRGHKTAVIDFDVGLRNLDLIMGCERRVVYDFVNVIQGEASLKQALIKDKQLENLFILPASQTRDKDALTQEGVEKVIDELKEMGFDYIVCDSPAGIEAGALMAAYFADDALVVTNPEVSSVRDSDRILGILAAKSRRAVQGDEPVKEYLLLTRYNPKRVNDGEMLSLSDIEDILRIKLIGVIPESEAVLQASNQGLPAIHLKDTDVSEAYKDVVARFLGEERSLRFTDYEKPGLLKRLFGGK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

27282 : 70442

Synechococcus_phage(50.0%)

protease,tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL09800.1\|27282_28185_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL09801.1\|28314_28614_-	hypothetical protein	NA	NA	NA	NA
AUL09802.1\|28674_29109_-	hypothetical protein	NA	NA	NA	NA
AUL09803.1\|29141_30359_-	thiolase	NA	NA	NA	NA
AUL09804.1\|30364_30862_-	dehydratase	NA	NA	NA	NA
AUL09805.1\|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL13099.1\|32214_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUL09806.1\|33048_34470_+	2-methylcitrate dehydratase	NA	NA	NA	NA
AUL09807.1\|35571_36762_-	MFS transporter	NA	NA	NA	NA
AUL09808.1\|37011_37923_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
AUL09809.1\|37924_40063_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
AUL09810.1\|40059_40599_+	D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AUL09811.1\|40602_41331_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AUL09812.1\|41317_42211_+	hypothetical protein	NA	NA	NA	NA
AUL09813.1\|42281_42677_+	lactoylglutathione lyase	NA	NA	NA	NA
AUL09814.1\|42686_43217_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.7e-12	35.4
AUL09815.1\|43345_43525_-	hypothetical protein	NA	NA	NA	NA
AUL09816.1\|43662_44613_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL13100.1\|45223_45748_+	hypothetical protein	NA	NA	NA	NA
AUL09817.1\|45719_45956_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AUL09818.1\|46083_46977_+	hypothetical protein	NA	NA	NA	NA
AUL09819.1\|48146_49394_+	homoserine O-acetyltransferase	NA	NA	NA	NA
AUL09820.1\|49390_50005_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
AUL09821.1\|51132_52389_+	muropeptide transporter AmpG	NA	NA	NA	NA
AUL09822.1\|53620_54355_-	glutamate racemase	NA	NA	NA	NA
AUL09823.1\|54360_54951_-	arginine transporter ATP-binding subunit	G9BWD6	Planktothrix_phage	3.2e-20	33.6
AUL09824.1\|54975_55665_-	amino acid ABC transporter permease	NA	NA	NA	NA
AUL09825.1\|55661_56423_-	glutamate ABC transporter permease	NA	NA	NA	NA
AUL09826.1\|56502_57402_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL09827.1\|57495_58446_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL09828.1\|59246_60473_-	serine kinase HipA	NA	NA	NA	NA
AUL09829.1\|60472_60892_-	transcriptional regulator	NA	NA	NA	NA
AUL13101.1\|61075_62017_-	hypothetical protein	NA	NA	NA	NA
AUL09830.1\|62440_63415_-	hypothetical protein	NA	NA	NA	NA
AUL09831.1\|63471_64053_-\|protease	protease	NA	NA	NA	NA
AUL09832.1\|64065_64368_-	ferredoxin	NA	NA	NA	NA
AUL09833.1\|64486_65545_-	oxidoreductase	NA	NA	NA	NA
AUL09834.1\|65579_66851_-	hypothetical protein	NA	NA	NA	NA
AUL09835.1\|66881_67136_-	hypothetical protein	NA	NA	NA	NA
AUL09836.1\|67480_68662_-	hypothetical protein	NA	NA	NA	NA
AUL09837.1\|69131_70034_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL09838.1\|70127_70442_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

77632 : 136105

Planktothrix_phage(22.22%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL09845.1\|77632_78583_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL13102.1\|78657_79602_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL09846.1\|79598_81473_-	polysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	2.0e-23	26.9
AUL09847.1\|82820_83525_-	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA
AUL09848.1\|83521_84628_-	glycosyl transferase	NA	NA	NA	NA
AUL09849.1\|84889_85483_-	sugar transferase	NA	NA	NA	NA
AUL09850.1\|85479_86667_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA
AUL09851.1\|86729_87989_-	glycosyltransferase WbuB	NA	NA	NA	NA
AUL09852.1\|88012_89101_-	UDP-N-acetylglucosamine 2-epimerase	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.8e-46	36.3
AUL09853.1\|89108_90209_-	aminotransferase DegT	A0A2K9L0G1	Tupanvirus	3.3e-31	29.7
AUL09854.1\|90212_90788_-	N-acetyltransferase	NA	NA	NA	NA
AUL09855.1\|90791_91844_-	oxidoreductase	NA	NA	NA	NA
AUL13103.1\|91974_92982_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
AUL09856.1\|92983_94270_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
AUL09857.1\|94286_94442_-	hypothetical protein	NA	NA	NA	NA
AUL09858.1\|94466_95270_-	pantothenate kinase	NA	NA	NA	NA
AUL09859.1\|95266_96133_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
AUL09860.1\|96207_97338_+	ABC transporter permease	NA	NA	NA	NA
AUL09861.1\|97337_98177_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.1e-21	32.4
AUL09862.1\|98330_98798_-	hypothetical protein	NA	NA	NA	NA
AUL09863.1\|98887_99109_+	hypothetical protein	NA	NA	NA	NA
AUL09864.1\|99109_99712_+	hypothetical protein	NA	NA	NA	NA
AUL09865.1\|99741_100395_+	alpha/beta hydrolase	NA	NA	NA	NA
AUL13104.1\|100605_101784_+	peptidase	B6DZZ7	Stx2-converting_phage	5.8e-66	40.5
AUL09866.1\|101864_102731_+	D-amino acid aminotransferase	NA	NA	NA	NA
AUL09867.1\|102806_103082_+	DUF493 domain-containing protein	NA	NA	NA	NA
AUL09868.1\|103089_103752_+	octanoyltransferase	NA	NA	NA	NA
AUL09869.1\|103813_104815_+	lipoyl synthase	NA	NA	NA	NA
AUL09870.1\|104829_105378_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.7e-47	53.4
AUL09871.1\|105435_106332_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
AUL09872.1\|106328_107390_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.6e-78	44.8
AUL09873.1\|107425_108328_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL09874.1\|109275_110469_+	cystathionine beta-lyase	NA	NA	NA	NA
AUL09875.1\|110550_111180_-	thiol:disulfide interchange protein	NA	NA	NA	NA
AUL09876.1\|111241_111925_-	cell division protein	NA	NA	NA	NA
AUL09877.1\|111934_113617_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
AUL13105.1\|113904_114252_+	hypothetical protein	NA	NA	NA	NA
AUL09878.1\|114342_114660_+	hypothetical protein	NA	NA	NA	NA
AUL13106.1\|114942_115959_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL09879.1\|116034_116835_-	ABC transporter permease	NA	NA	NA	NA
AUL09880.1\|116831_117707_-	ABC transporter permease	NA	NA	NA	NA
AUL09881.1\|117717_119010_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL09882.1\|119052_120093_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-22	33.7
AUL09883.1\|120198_121020_-	phosphodiesterase	NA	NA	NA	NA
AUL09884.1\|121120_122071_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL09885.1\|122168_123074_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.8e-21	31.7
AUL09886.1\|123070_123904_-	ABC transporter permease	NA	NA	NA	NA
AUL09887.1\|124740_125751_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL09888.1\|125747_126137_-	hypothetical protein	NA	NA	NA	NA
AUL09889.1\|126120_126732_+	hypothetical protein	NA	NA	NA	NA
AUL09890.1\|127018_128284_+	amidase	NA	NA	NA	NA
AUL09891.1\|128374_130075_-	2-isopropylmalate synthase	NA	NA	NA	NA
AUL09892.1\|130501_131149_-	hypothetical protein	NA	NA	NA	NA
AUL09893.1\|131147_132587_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA
AUL09894.1\|132697_132982_+	bacterioferritin	NA	NA	NA	NA
AUL09895.1\|133009_133888_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL09896.1\|135154_136105_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

164889 : 236263

Diachasmimorpha_longicaudata_entomopoxvirus(12.5%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL09920.1\|164889_165840_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL09921.1\|167283_168186_-	hypothetical protein	NA	NA	NA	NA
AUL09922.1\|168163_168793_-	hypothetical protein	NA	NA	NA	NA
AUL09923.1\|169075_170506_+	RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.8e-44	29.8
AUL09924.1\|170539_171169_+	threonine transporter RhtB	NA	NA	NA	NA
AUL09925.1\|171217_172825_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	9.3e-14	37.8
AUL09926.1\|172861_173533_+	hypothetical protein	NA	NA	NA	NA
AUL13109.1\|173614_174091_-	bacterioferritin	NA	NA	NA	NA
AUL09927.1\|174345_175248_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL09928.1\|176363_176891_+	hypothetical protein	NA	NA	NA	NA
AUL09929.1\|176982_177798_+	hypothetical protein	NA	NA	NA	NA
AUL09930.1\|177858_178593_+	sulfurtransferase	NA	NA	NA	NA
AUL09931.1\|178630_180709_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-27	23.6
AUL09932.1\|180958_181231_-	hypothetical protein	NA	NA	NA	NA
AUL09933.1\|181332_182418_+	ATP-binding protein	NA	NA	NA	NA
AUL09934.1\|182421_184326_+	hypothetical protein	NA	NA	NA	NA
AUL09935.1\|184322_187997_+	hypothetical protein	NA	NA	NA	NA
AUL09936.1\|188057_188621_+	dCTP deaminase	S5VM63	Pseudomonas_phage	2.6e-72	75.3
AUL09937.1\|188628_189051_-	glyoxalase	NA	NA	NA	NA
AUL09938.1\|189078_189498_-	glyoxalase	NA	NA	NA	NA
AUL09939.1\|189526_189874_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUL13110.1\|190147_190597_+	hypothetical protein	NA	NA	NA	NA
AUL09940.1\|190751_193022_+	lysine decarboxylase	NA	NA	NA	NA
AUL09941.1\|193097_194303_+	hypothetical protein	NA	NA	NA	NA
AUL09942.1\|194448_195351_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL09943.1\|195453_196089_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.8e-83	73.8
AUL09944.1\|196085_196979_+	ZIP family metal transporter	NA	NA	NA	NA
AUL09945.1\|197373_198474_+	glycine cleavage system protein T	NA	NA	NA	NA
AUL09946.1\|198555_198930_+	glycine cleavage system protein H	NA	NA	NA	NA
AUL09947.1\|198989_201854_+	glycine dehydrogenase (aminomethyl-transferring)	E3SN07	Prochlorococcus_phage	1.2e-261	51.4
AUL09948.1\|201998_202739_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUL09949.1\|202808_204020_+	formyl-CoA transferase	NA	NA	NA	NA
AUL09950.1\|204048_205017_+	hypothetical protein	NA	NA	NA	NA
AUL09951.1\|206736_207060_+	PsiF repeat family protein	NA	NA	NA	NA
AUL13111.1\|207164_208205_-	cyclase	NA	NA	NA	NA
AUL09952.1\|208210_208990_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
AUL09953.1\|209035_209332_-	hypothetical protein	NA	NA	NA	NA
AUL09954.1\|209357_209633_-	muconolactone delta-isomerase	NA	NA	NA	NA
AUL09955.1\|209689_210334_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AUL09956.1\|210333_211020_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AUL13112.1\|211218_212001_+	IclR family transcriptional regulator	NA	NA	NA	NA
AUL09957.1\|212051_212777_-	short-chain dehydrogenase	NA	NA	NA	NA
AUL09958.1\|212808_214158_-	short-chain fatty acid transporter	NA	NA	NA	NA
AUL09959.1\|214269_215202_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
AUL09960.1\|215659_218455_-	peptidase S8	NA	NA	NA	NA
AUL09961.1\|219048_221892_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AUL09962.1\|222062_222782_+	7-cyano-7-deazaguanine synthase QueC	A0A0A0RPC6	Escherichia_phage	8.0e-50	43.9
AUL09963.1\|222820_223369_-	GNAT family N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	1.2e-21	41.7
AUL09964.1\|223523_224423_+	virginiamycin B lyase	NA	NA	NA	NA
AUL09965.1\|224447_225398_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL09966.1\|225615_226311_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUL09967.1\|226327_227740_+	hydroxyacid dehydrogenase	NA	NA	NA	NA
AUL09968.1\|227852_229283_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
AUL09969.1\|229324_231238_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
AUL09970.1\|231556_232123_+	preprotein translocase subunit SecD	NA	NA	NA	NA
AUL09971.1\|232213_233215_+	restriction endonuclease	NA	NA	NA	NA
AUL09972.1\|234365_235316_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL09973.1\|235312_236263_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

390845 : 448353

Orpheovirus(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL10111.1\|390845_391796_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10112.1\|391938_392850_+	reductase	NA	NA	NA	NA
AUL10113.1\|392846_393095_+	NrdH-redoxin	NA	NA	NA	NA
AUL10114.1\|393091_394297_+	CoA transferase	NA	NA	NA	NA
AUL10115.1\|394369_395365_-	hypothetical protein	NA	NA	NA	NA
AUL10116.1\|395387_396608_-	acyl-CoA transferase	NA	NA	NA	NA
AUL10117.1\|396604_397249_-	hypothetical protein	NA	NA	NA	NA
AUL10118.1\|397245_397638_-	hypothetical protein	NA	NA	NA	NA
AUL10119.1\|397526_398879_-	hypothetical protein	NA	NA	NA	NA
AUL10120.1\|398979_399789_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUL13121.1\|400093_401047_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	5.6e-59	42.5
AUL10121.1\|401145_402129_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10122.1\|402805_403576_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUL10123.1\|403572_404751_-	carnitine dehydratase	NA	NA	NA	NA
AUL10124.1\|406620_407517_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL10125.1\|407557_409147_-	sulfurtransferase	NA	NA	NA	NA
AUL10126.1\|409196_410189_-	hypothetical protein	NA	NA	NA	NA
AUL10127.1\|410257_410857_-	hypothetical protein	NA	NA	NA	NA
AUL10128.1\|411317_412298_-	hypothetical protein	NA	NA	NA	NA
AUL10129.1\|412373_413276_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10130.1\|413412_414327_+	EamA family transporter	NA	NA	NA	NA
AUL10131.1\|414323_414983_+	hypothetical protein	NA	NA	NA	NA
AUL10132.1\|415072_415996_+	alpha/beta hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	4.8e-07	27.2
AUL10133.1\|416001_416457_-	hypothetical protein	NA	NA	NA	NA
AUL10134.1\|416453_417557_-	hypothetical protein	NA	NA	NA	NA
AUL10135.1\|417744_419364_-	dolichyl-phosphate-mannose--protein mannosyltransferase	NA	NA	NA	NA
AUL10136.1\|419360_420419_-	glycosyltransferase	I1TED8	Salmonella_phage	2.8e-59	40.5
AUL10137.1\|420548_421043_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUL10138.1\|421135_422113_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10139.1\|422308_423514_+	sodium/glutamate symporter	NA	NA	NA	NA
AUL10140.1\|423510_425022_+	TRAP ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL13122.1\|425037_426351_-	short-chain fatty acid transporter	NA	NA	NA	NA
AUL10141.1\|426541_426721_-	hypothetical protein	NA	NA	NA	NA
AUL10142.1\|427130_427865_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	1.4e-41	43.8
AUL10143.1\|430357_431260_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10144.1\|431391_431790_-	elongation factor G	E4ZFJ7	Streptococcus_phage	9.0e-19	44.3
AUL10145.1\|432200_432671_-	universal stress protein	NA	NA	NA	NA
AUL10146.1\|432759_433104_-	TIGR01244 family protein	NA	NA	NA	NA
AUL10147.1\|433203_434604_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUL10148.1\|436392_436911_-	methyltransferase	G3MA03	Bacillus_virus	2.1e-12	38.9
AUL10149.1\|437021_437777_+	hypothetical protein	A0A0R6PEZ3	Moraxella_phage	2.9e-42	40.8
AUL10150.1\|437972_439205_+	CoA transferase	NA	NA	NA	NA
AUL10151.1\|439197_439983_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUL10152.1\|440049_441021_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL10153.1\|441031_442009_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL10154.1\|442134_443307_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUL10155.1\|443333_444362_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUL10156.1\|444427_445621_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AUL10157.1\|447402_448353_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

620783 : 722294

109

uncultured_Caudovirales_phage(14.29%)

terminase,tRNA,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL10309.1\|620783_621734_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10310.1\|622432_622816_+	hypothetical protein	NA	NA	NA	NA
AUL10311.1\|622873_623476_+	hypothetical protein	NA	NA	NA	NA
AUL13129.1\|623493_623895_-	hypothetical protein	NA	NA	NA	NA
AUL10312.1\|624010_624922_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL10313.1\|624918_625500_+	NUDIX hydrolase	NA	NA	NA	NA
AUL13130.1\|626303_627029_+	arginyltransferase	NA	NA	NA	NA
AUL10314.1\|627069_628119_+	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA
AUL10315.1\|628266_628845_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA
AUL10316.1\|629231_630209_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL10317.1\|630302_634697_-	dermonecrotic toxin	NA	NA	NA	NA
AUL10318.1\|634897_635746_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUL10319.1\|635904_636717_-	competence/damage-inducible protein A	NA	NA	NA	NA
AUL10320.1\|636772_637723_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10321.1\|637821_638622_-	hypothetical protein	NA	NA	NA	NA
AUL10322.1\|638683_639067_+	thiol reductase thioredoxin	NA	NA	NA	NA
AUL10323.1\|639078_640512_-	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.5e-52	34.4
AUL10324.1\|640718_641048_-	hypothetical protein	NA	NA	NA	NA
AUL10325.1\|641050_641800_-	hypothetical protein	NA	NA	NA	NA
AUL10326.1\|641982_642903_+	branched chain amino acid aminotransferase	NA	NA	NA	NA
AUL10327.1\|642949_643162_+	hypothetical protein	NA	NA	NA	NA
AUL10328.1\|643184_643607_+	DUF4440 domain-containing protein	NA	NA	NA	NA
AUL10329.1\|643623_644724_+	alpha/beta hydrolase	NA	NA	NA	NA
AUL10330.1\|644820_646338_-	peptidase	NA	NA	NA	NA
AUL10331.1\|646413_647253_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.1e-66	48.9
AUL13131.1\|647274_648147_-	hypothetical protein	NA	NA	NA	NA
AUL10332.1\|648237_649332_-	porin	NA	NA	NA	NA
AUL10333.1\|649625_650528_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL13132.1\|650650_651592_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10334.1\|651675_652035_-	hypothetical protein	NA	NA	NA	NA
AUL10335.1\|652416_653454_-	hypothetical protein	NA	NA	NA	NA
AUL10336.1\|653770_655111_+	Xaa-Pro aminopeptidase	NA	NA	NA	NA
AUL10337.1\|655120_655573_-	hypothetical protein	NA	NA	NA	NA
AUL10338.1\|655678_656851_+	monooxygenase	NA	NA	NA	NA
AUL10339.1\|656916_657942_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AUL10340.1\|657982_658222_+	Fis family transcriptional regulator	NA	NA	NA	NA
AUL10341.1\|658291_659881_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	8.7e-65	47.2
AUL10342.1\|659880_660429_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
AUL10343.1\|660509_661082_+	Holliday junction DNA helicase RuvA	NA	NA	NA	NA
AUL10344.1\|661100_662012_-	NAD-dependent dehydratase	NA	NA	NA	NA
AUL10345.1\|662085_663054_-	serine dehydratase	NA	NA	NA	NA
AUL10346.1\|663176_664250_+	Holliday junction DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.3e-08	25.7
AUL10347.1\|664254_666075_-	ATP-dependent DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	3.1e-74	35.3
AUL10348.1\|667189_667525_+	hypothetical protein	NA	NA	NA	NA
AUL10349.1\|667658_668309_+	carbonate dehydratase	NA	NA	NA	NA
AUL10350.1\|668330_669749_-	amidase	NA	NA	NA	NA
AUL10351.1\|669818_670574_-	hypothetical protein	NA	NA	NA	NA
AUL13133.1\|670542_671301_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUL10352.1\|671311_672193_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUL10353.1\|672209_672917_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.2e-07	25.4
AUL10354.1\|672919_673678_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-14	24.4
AUL10355.1\|673887_675630_+	sulfite reductase	NA	NA	NA	NA
AUL10356.1\|675622_676147_+	hypothetical protein	NA	NA	NA	NA
AUL10357.1\|676186_676981_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL10358.1\|677148_678222_+	hypothetical protein	NA	NA	NA	NA
AUL10359.1\|678320_679271_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10360.1\|679369_680320_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10361.1\|680571_680778_-	hypothetical protein	NA	NA	NA	NA
AUL13134.1\|680849_681461_-	LexA family transcriptional repressor	NA	NA	NA	NA
AUL10362.1\|681940_682261_-	hypothetical protein	NA	NA	NA	NA
AUL10363.1\|682253_682952_-	hypothetical protein	NA	NA	NA	NA
AUL10364.1\|682966_683188_-	hypothetical protein	NA	NA	NA	NA
AUL10365.1\|683253_684156_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10366.1\|684795_685281_+\|terminase	terminase	C7U0W1	Enterobacteria_phage	7.3e-39	61.5
AUL10367.1\|685267_686545_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.4e-150	64.7
AUL10368.1\|686547_687966_+	hypothetical protein	R9TF43	Synechococcus_phage	2.2e-99	42.1
AUL10369.1\|687937_689050_+	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	2.1e-102	49.7
AUL10370.1\|689055_689298_+	hypothetical protein	A0A0H5AUE5	Pseudomonas_phage	5.6e-16	53.2
AUL10371.1\|689420_690023_+	hypothetical protein	R9TF81	Synechococcus_phage	7.9e-27	43.6
AUL10372.1\|690451_691402_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10373.1\|692076_692328_+	hypothetical protein	NA	NA	NA	NA
AUL10374.1\|692390_692873_+	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	1.8e-13	37.1
AUL10375.1\|692874_693075_+	hypothetical protein	NA	NA	NA	NA
AUL10376.1\|693074_693470_+	hypothetical protein	A0A2D2W284	Stenotrophomonas_phage	7.8e-07	35.0
AUL10377.1\|693466_693865_+	hypothetical protein	I6PCW1	Cronobacter_phage	4.2e-16	38.0
AUL10378.1\|693861_694284_+	hypothetical protein	NA	NA	NA	NA
AUL10379.1\|694291_694792_+	HNH endonuclease	A0A1I9SEX5	Klebsiella_phage	4.4e-31	45.1
AUL10380.1\|695046_695565_+\|tail	phage tail protein	A0A1S5R1H0	Pseudomonas_phage	5.4e-24	38.3
AUL10381.1\|695574_695904_+	hypothetical protein	A0A2H4J121	uncultured_Caudovirales_phage	2.9e-15	44.0
AUL10382.1\|695921_696212_+	hypothetical protein	A0A2H4JBP7	uncultured_Caudovirales_phage	3.7e-14	45.2
AUL10383.1\|696237_698850_+\|tail	phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-105	38.6
AUL10384.1\|698859_699219_+	hypothetical protein	NA	NA	NA	NA
AUL10385.1\|699286_699820_+	hypothetical protein	A5A3Q9	Burkholderia_phage	1.1e-40	46.9
AUL10386.1\|699816_700206_+	hypothetical protein	A0A0G3EYJ9	Achromobacter_phage	3.0e-35	50.0
AUL10387.1\|700198_704155_+	hypothetical protein	A0A0B5A1N2	Achromobacter_phage	3.9e-215	40.8
AUL10388.1\|704159_704576_+	hypothetical protein	NA	NA	NA	NA
AUL10389.1\|704794_705058_+	hypothetical protein	A0A1B0V3F2	Roseobacter_phage	7.2e-09	41.8
AUL10390.1\|705057_705870_+	hypothetical protein	NA	NA	NA	NA
AUL10391.1\|705874_706117_+	hypothetical protein	NA	NA	NA	NA
AUL10392.1\|706095_706647_+	lysozyme	NA	NA	NA	NA
AUL10393.1\|706646_707162_+	hypothetical protein	NA	NA	NA	NA
AUL10394.1\|707158_707440_-	hypothetical protein	NA	NA	NA	NA
AUL10395.1\|707439_707661_-	hypothetical protein	NA	NA	NA	NA
AUL10396.1\|707989_708661_-	hypothetical protein	Q5QF62	Pseudomonas_virus	4.7e-36	39.9
AUL10397.1\|708588_708957_-	hypothetical protein	NA	NA	NA	NA
AUL10398.1\|709016_709703_-	DNA-binding response regulator	NA	NA	NA	NA
AUL10399.1\|709683_710256_-	RNA pyrophosphohydrolase	NA	NA	NA	NA
AUL10400.1\|710321_712052_+\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	4.6e-11	29.4
AUL10401.1\|712104_712533_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
AUL10402.1\|712535_713216_+	protein TolQ	NA	NA	NA	NA
AUL10403.1\|713215_713674_+	protein TolR	NA	NA	NA	NA
AUL10404.1\|714700_716017_+	Tol-Pal system beta propeller repeat protein TolB	NA	NA	NA	NA
AUL10405.1\|716048_716546_+	peptidoglycan-associated lipoprotein	NA	NA	NA	NA
AUL10406.1\|716632_717322_+	tol-pal system protein YbgF	NA	NA	NA	NA
AUL10407.1\|717321_718371_+	iron-siderophore ABC transporter permease	NA	NA	NA	NA
AUL10408.1\|718367_719162_+	iron ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-15	30.6
AUL10409.1\|719330_719681_+	hypothetical protein	NA	NA	NA	NA
AUL10410.1\|719656_720214_+	hypothetical protein	NA	NA	NA	NA
AUL10411.1\|721343_722294_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

860822 : 914952

Vibrio_phage(25.0%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL10517.1\|860822_862781_-\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	8.0e-28	30.3
AUL10518.1\|862863_863814_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10519.1\|864034_864703_+	transcriptional regulator	NA	NA	NA	NA
AUL10520.1\|864826_865933_+	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AUL10521.1\|865945_869059_+	multidrug efflux protein	S5VTK5	Leptospira_phage	4.5e-57	21.5
AUL10522.1\|869055_870549_+	RND transporter	NA	NA	NA	NA
AUL10523.1\|870563_871235_+	MarR family transcriptional regulator	NA	NA	NA	NA
AUL13144.1\|871278_871731_-	azurin	NA	NA	NA	NA
AUL10524.1\|871913_872561_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUL13145.1\|872664_874713_+	hydantoinase	NA	NA	NA	NA
AUL10525.1\|874709_876722_+	hydantoin utilization protein B	NA	NA	NA	NA
AUL10526.1\|876747_878082_+	hypothetical protein	NA	NA	NA	NA
AUL10527.1\|878190_879183_+	hypothetical protein	NA	NA	NA	NA
AUL10528.1\|879249_881334_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
AUL10529.1\|881358_882330_-	hypothetical protein	NA	NA	NA	NA
AUL13146.1\|882458_883460_-	peptidase M14	NA	NA	NA	NA
AUL10530.1\|883493_884645_-	cystathionine beta-lyase	NA	NA	NA	NA
AUL10531.1\|884848_885739_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL10532.1\|885816_886641_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUL13147.1\|886837_887854_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL10533.1\|888050_889034_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL10534.1\|889092_890220_-	argininosuccinate lyase	NA	NA	NA	NA
AUL10535.1\|890210_890585_-	hypothetical protein	NA	NA	NA	NA
AUL10536.1\|890632_892021_-	hypothetical protein	NA	NA	NA	NA
AUL10537.1\|892051_893041_-	hypothetical protein	NA	NA	NA	NA
AUL10538.1\|893151_894384_-	methylaspartate ammonia-lyase	NA	NA	NA	NA
AUL10539.1\|894665_895466_+	IclR family transcriptional regulator	NA	NA	NA	NA
AUL10540.1\|895488_897642_-\|holin	high-affinity choline transporter BetT	NA	NA	NA	NA
AUL10541.1\|898506_898953_-	preprotein translocase subunit SecG	NA	NA	NA	NA
AUL10542.1\|898974_899721_-	triose-phosphate isomerase	NA	NA	NA	NA
AUL10543.1\|899864_900842_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
AUL10544.1\|901475_902087_+	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	3.3e-12	32.5
AUL10545.1\|902080_903298_-	threonine ammonia-lyase	NA	NA	NA	NA
AUL10546.1\|903438_904389_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10547.1\|904385_905105_-	hypothetical protein	NA	NA	NA	NA
AUL10548.1\|905225_907385_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
AUL10549.1\|907475_907745_-	30S ribosomal protein S15	NA	NA	NA	NA
AUL13148.1\|908038_908566_+	hypothetical protein	NA	NA	NA	NA
AUL10550.1\|908584_909364_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AUL10551.1\|909531_910548_-	ketol-acid reductoisomerase	NA	NA	NA	NA
AUL10552.1\|910620_911112_-	acetolactate synthase small subunit	NA	NA	NA	NA
AUL10553.1\|911122_912838_-	acetolactate synthase, large subunit, biosynthetic type	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	3.1e-60	30.3
AUL10554.1\|913308_913920_+	hypothetical protein	NA	NA	NA	NA
AUL10555.1\|914001_914952_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

939451 : 1001600

Bacillus_virus(15.38%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL10577.1\|939451_940354_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10578.1\|940350_940734_-	Rieske (2Fe-2S) protein	NA	NA	NA	NA
AUL10579.1\|940788_942603_-	metal ABC transporter permease	W8CYL7	Bacillus_phage	5.7e-44	27.9
AUL13149.1\|942752_943580_+	oxidoreductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-67	47.4
AUL10580.1\|943625_944606_+	alcohol dehydrogenase	NA	NA	NA	NA
AUL10581.1\|944602_944815_-	hypothetical protein	NA	NA	NA	NA
AUL10582.1\|944811_945993_-	hypothetical protein	NA	NA	NA	NA
AUL10583.1\|946156_946891_+	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.9e-62	49.2
AUL10584.1\|946892_949505_-	penicillin-binding protein	NA	NA	NA	NA
AUL10585.1\|949640_951554_-	S9 family peptidase	NA	NA	NA	NA
AUL10586.1\|952169_952580_-	phenylacetic acid degradation protein	NA	NA	NA	NA
AUL10587.1\|952677_953763_+	DNA polymerase IV	NA	NA	NA	NA
AUL10588.1\|953861_954812_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10589.1\|954808_955783_-	hypothetical protein	NA	NA	NA	NA
AUL10590.1\|955928_956819_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	4.3e-05	27.6
AUL10591.1\|957095_957488_-	hypothetical protein	A0A0R6PJ17	Moraxella_phage	4.8e-25	45.0
AUL10592.1\|957617_958568_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10593.1\|958597_958780_-	addiction module toxin, HicA family	A0A1L2JY37	Aeribacillus_phage	3.7e-12	56.1
AUL10594.1\|959552_960734_-	MFS transporter	NA	NA	NA	NA
AUL10595.1\|960949_961627_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AUL10596.1\|961623_962349_-	bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase	NA	NA	NA	NA
AUL10597.1\|962474_963056_-	hypothetical protein	NA	NA	NA	NA
AUL10598.1\|963426_966108_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.2e-104	33.5
AUL13150.1\|966110_967241_+	phosphoserine transaminase	M1Q1P2	Streptococcus_phage	4.9e-78	44.0
AUL10599.1\|967233_968319_+	chorismate mutase	NA	NA	NA	NA
AUL10600.1\|968405_969305_+	prephenate dehydrogenase	NA	NA	NA	NA
AUL10601.1\|969301_970630_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AUL10602.1\|970644_971316_+	cytidylate kinase	NA	NA	NA	NA
AUL10603.1\|971503_973219_+	30S ribosomal protein S1	NA	NA	NA	NA
AUL10604.1\|973220_973580_+	integration host factor subunit beta	NA	NA	NA	NA
AUL10605.1\|973771_974086_+	hypothetical protein	NA	NA	NA	NA
AUL10606.1\|974128_975349_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
AUL10607.1\|975345_976287_+	hypothetical protein	A0A2H4N7X4	Lake_Baikal_phage	1.5e-16	28.1
AUL10608.1\|976283_977273_+	ADP-glyceromanno-heptose 6-epimerase	E3SJ87	Synechococcus_phage	2.2e-26	34.4
AUL13151.1\|977562_977892_+	hypothetical protein	NA	NA	NA	NA
AUL10609.1\|977990_978941_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10610.1\|979021_979933_+	cysteine synthase B	A0A1X9I5K7	Streptococcus_phage	8.0e-47	38.8
AUL10611.1\|979993_981139_-	lytic murein transglycosylase B	NA	NA	NA	NA
AUL10612.1\|981158_982073_+	deacetylase	A0A2K9KZC4	Tupanvirus	9.8e-45	34.7
AUL10613.1\|982144_982894_+	electron transporter RnfB	NA	NA	NA	NA
AUL10614.1\|982893_983823_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA
AUL10615.1\|984066_985893_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUL10616.1\|985975_986617_+	peroxidase	NA	NA	NA	NA
AUL10617.1\|986806_987841_+	sulfate transporter subunit	NA	NA	NA	NA
AUL10618.1\|987856_988060_+	hypothetical protein	NA	NA	NA	NA
AUL10619.1\|988081_988756_+	sulfate ABC transporter permease subunit CysT	NA	NA	NA	NA
AUL10620.1\|988870_989653_+	sulfate ABC transporter permease subunit CysW	NA	NA	NA	NA
AUL10621.1\|989677_990742_+	sulfate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.8e-24	30.3
AUL13152.1\|991539_992448_+	sulfate adenylyltransferase small subunit	NA	NA	NA	NA
AUL10622.1\|993935_995210_+	radical SAM protein	NA	NA	NA	NA
AUL10623.1\|995363_995744_+	hypothetical protein	NA	NA	NA	NA
AUL10624.1\|995751_996624_-	multidrug DMT transporter permease	NA	NA	NA	NA
AUL10625.1\|996929_997310_+	50S ribosomal protein L19	NA	NA	NA	NA
AUL10626.1\|997559_998246_+	coenzyme A pyrophosphatase	NA	NA	NA	NA
AUL10627.1\|998341_999292_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10628.1\|999396_1000446_+	aldo/keto reductase	NA	NA	NA	NA
AUL13153.1\|1000583_1001600_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

1060415 : 1118845

uncultured_Mediterranean_phage(37.5%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL13157.1\|1060415_1061432_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL13158.1\|1062262_1063270_+	aldo/keto reductase	NA	NA	NA	NA
AUL10667.1\|1063266_1064910_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA
AUL10668.1\|1064906_1065794_-	magnesium/cobalt efflux protein	NA	NA	NA	NA
AUL10669.1\|1065934_1066408_-	rRNA maturation RNase YbeY	NA	NA	NA	NA
AUL10670.1\|1066397_1067420_-	phosphate starvation-inducible protein PhoH	A0A0S0MVD6	Pseudomonas_phage	8.7e-50	45.4
AUL10671.1\|1067416_1068844_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
AUL13159.1\|1069781_1070798_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL10672.1\|1071130_1072066_-	protein-export membrane protein SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.0e-41	35.5
AUL10673.1\|1072115_1073996_-	protein-export membrane protein SecD	NA	NA	NA	NA
AUL10674.1\|1074062_1074407_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.0e-10	40.4
AUL10675.1\|1074551_1075688_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.9e-85	44.4
AUL10676.1\|1075684_1076758_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
AUL10677.1\|1076915_1078352_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
AUL13160.1\|1078442_1079084_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
AUL13161.1\|1079419_1080436_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL13162.1\|1082478_1083429_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL13163.1\|1084631_1086053_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
AUL13164.1\|1086319_1087033_+	hypothetical protein	NA	NA	NA	NA
AUL10678.1\|1087117_1087435_+	hypothetical protein	NA	NA	NA	NA
AUL10679.1\|1087475_1087889_+	hypothetical protein	NA	NA	NA	NA
AUL10680.1\|1087890_1088250_+	hypothetical protein	NA	NA	NA	NA
AUL10681.1\|1088292_1089837_-	3-octaprenyl-4-hydroxybenzoate decarboxylase	NA	NA	NA	NA
AUL10682.1\|1089920_1090751_+	lytic transglycosylase	NA	NA	NA	NA
AUL10683.1\|1090785_1091940_-	aminotransferase	NA	NA	NA	NA
AUL10684.1\|1091982_1092855_+	hypothetical protein	NA	NA	NA	NA
AUL10685.1\|1092971_1095260_+	NADP-dependent malic enzyme	NA	NA	NA	NA
AUL10686.1\|1096466_1096931_+	barstar family protein 2	NA	NA	NA	NA
AUL10687.1\|1096957_1097908_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL13165.1\|1098275_1099052_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-17	28.7
AUL10688.1\|1099096_1099933_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA
AUL10689.1\|1099975_1100992_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
AUL10690.1\|1101126_1102167_-	phosphate ABC transporter substrate-binding protein PstS	M4QHS4	Cyanophage	2.1e-51	40.2
AUL10691.1\|1102361_1104443_-	RNA degradosome polyphosphate kinase	NA	NA	NA	NA
AUL10692.1\|1104678_1106172_+	exopolyphosphatase	NA	NA	NA	NA
AUL10693.1\|1106402_1107197_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUL10694.1\|1107417_1108776_-	phosphoglucosamine mutase	NA	NA	NA	NA
AUL10695.1\|1108772_1109615_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-26	32.5
AUL10696.1\|1109633_1111520_-	cell division protein FtsH	M4QMW8	Micromonas_pusilla_virus	1.4e-109	41.5
AUL10697.1\|1111757_1112390_-	rRNA methyltransferase	NA	NA	NA	NA
AUL10698.1\|1112408_1113011_+	hypothetical protein	NA	NA	NA	NA
AUL10699.1\|1114914_1115715_-	hypothetical protein	NA	NA	NA	NA
AUL10700.1\|1115758_1116745_-	homoserine kinase	NA	NA	NA	NA
AUL10701.1\|1116920_1117898_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AUL10702.1\|1117894_1118845_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1158544 : 1237165

Erysipelothrix_phage(25.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL10730.1\|1158544_1159447_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10731.1\|1159593_1160217_-	fimbrial protein	NA	NA	NA	NA
AUL10732.1\|1160390_1162673_-	NADP-dependent malic enzyme	NA	NA	NA	NA
AUL10733.1\|1162827_1165524_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
AUL10734.1\|1165649_1166138_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AUL10735.1\|1166173_1168036_+	oligopeptide transporter, OPT family	NA	NA	NA	NA
AUL10736.1\|1168014_1168224_+	hypothetical protein	NA	NA	NA	NA
AUL10737.1\|1168548_1171419_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
AUL10738.1\|1171464_1172679_+	dihydrolipoamide succinyltransferase	NA	NA	NA	NA
AUL10739.1\|1172908_1174336_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-41	28.1
AUL10740.1\|1174433_1175525_+	cell division protein ZapE	NA	NA	NA	NA
AUL10741.1\|1175537_1176296_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUL10742.1\|1176383_1177286_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL10743.1\|1177282_1178233_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10744.1\|1178362_1179346_-	LacI family transcriptional regulator	NA	NA	NA	NA
AUL10745.1\|1179400_1180123_-	short-chain dehydrogenase	NA	NA	NA	NA
AUL10746.1\|1181601_1182957_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AUL10747.1\|1183037_1185413_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
AUL10748.1\|1185577_1187653_+	helicase	A0A127AW80	Bacillus_phage	2.4e-75	30.0
AUL13168.1\|1187714_1188509_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AUL10749.1\|1188616_1189579_+	RNA pseudouridine synthase	NA	NA	NA	NA
AUL10750.1\|1189566_1190322_+	hypothetical protein	NA	NA	NA	NA
AUL10751.1\|1190429_1192067_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA
AUL10752.1\|1192134_1192872_+	beta-ketoacyl-ACP reductase	NA	NA	NA	NA
AUL10753.1\|1192974_1193550_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA
AUL10754.1\|1193722_1194259_+	hypothetical protein	NA	NA	NA	NA
AUL13169.1\|1194291_1194606_+	periplasmic lipoprotein involved in iron transport	NA	NA	NA	NA
AUL10755.1\|1194621_1195467_+	FTR1 family iron permease	NA	NA	NA	NA
AUL10756.1\|1195505_1196885_+	hypothetical protein	NA	NA	NA	NA
AUL10757.1\|1196962_1197844_+	phenazine biosynthesis protein PhzC/PhzF	NA	NA	NA	NA
AUL10758.1\|1197989_1198892_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10759.1\|1198888_1199299_-	lactoylglutathione lyase	NA	NA	NA	NA
AUL10760.1\|1199406_1200261_-	2-pyrone-4,6-dicarboxylate hydrolase	NA	NA	NA	NA
AUL10761.1\|1200253_1201216_-	hypothetical protein	NA	NA	NA	NA
AUL10762.1\|1201261_1202386_-	racemase	Q6A202	Oenococcus_phage	1.5e-31	28.3
AUL10763.1\|1202491_1203370_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL10764.1\|1203494_1204274_+	short-chain dehydrogenase	NA	NA	NA	NA
AUL10765.1\|1204427_1205849_+	MFS transporter	NA	NA	NA	NA
AUL10766.1\|1206283_1207981_+	sodium:proline symporter	NA	NA	NA	NA
AUL10767.1\|1208009_1208132_+	hypothetical protein	NA	NA	NA	NA
AUL13170.1\|1208207_1209149_-	LD-carboxypeptidase	NA	NA	NA	NA
AUL10768.1\|1209475_1210222_+	hypothetical protein	NA	NA	NA	NA
AUL10769.1\|1210229_1211156_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL10770.1\|1211277_1212195_+	oxidoreductase	NA	NA	NA	NA
AUL10771.1\|1212234_1213188_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL10772.1\|1213212_1213791_+	hypothetical protein	NA	NA	NA	NA
AUL10773.1\|1215464_1216073_+	hypothetical protein	NA	NA	NA	NA
AUL10774.1\|1216150_1216504_-	hypothetical protein	NA	NA	NA	NA
AUL13171.1\|1216587_1217520_-	succinylglutamate desuccinylase	NA	NA	NA	NA
AUL10775.1\|1217827_1218730_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10776.1\|1218816_1219767_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10777.1\|1220973_1222002_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUL10778.1\|1222081_1223380_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUL10779.1\|1223376_1223913_-	TRAP transporter small permease protein	NA	NA	NA	NA
AUL10780.1\|1224270_1228317_+	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	6.3e-160	67.4
AUL10781.1\|1236214_1237165_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

1419077 : 1471229

Salmonella_phage(25.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL10937.1\|1419077_1420028_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10938.1\|1420194_1420548_+	cytochrome C	NA	NA	NA	NA
AUL10939.1\|1420560_1420923_+	cytochrome	NA	NA	NA	NA
AUL10940.1\|1420964_1421390_-	hypothetical protein	NA	NA	NA	NA
AUL10941.1\|1421592_1422849_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.2e-11	64.8
AUL10942.1\|1423047_1424028_+	hypothetical protein	NA	NA	NA	NA
AUL10943.1\|1424177_1425419_+	hypothetical protein	NA	NA	NA	NA
AUL10944.1\|1425517_1426468_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10945.1\|1426476_1427172_-	two-component system response regulator KdpE	NA	NA	NA	NA
AUL10946.1\|1429992_1430592_-	potassium-transporting ATPase subunit C	NA	NA	NA	NA
AUL10947.1\|1430602_1432768_-	potassium-transporting ATPase subunit B	M1HBF8	Paramecium_bursaria_Chlorella_virus	1.2e-24	27.1
AUL10948.1\|1432791_1434576_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
AUL10949.1\|1434575_1434665_-	potassium-transporting ATPase subunit F	NA	NA	NA	NA
AUL10950.1\|1435359_1435632_+	hypothetical protein	NA	NA	NA	NA
AUL10951.1\|1435631_1437698_+	cation acetate symporter	NA	NA	NA	NA
AUL10952.1\|1437694_1438597_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10953.1\|1438743_1439694_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10954.1\|1439809_1440142_-	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA
AUL10955.1\|1440138_1440825_-	DNA mismatch repair protein MutS	NA	NA	NA	NA
AUL10956.1\|1440811_1441771_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.1e-57	40.2
AUL10957.1\|1441803_1444173_+	cell division protein FtsK	S5VNE3	Mycobacterium_phage	7.6e-81	48.0
AUL10958.1\|1444172_1444805_+	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AUL10959.1\|1444906_1446247_+	recombination factor protein RarA	G3MBE0	Bacillus_virus	1.6e-75	38.9
AUL10960.1\|1446293_1447649_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-83	47.5
AUL10961.1\|1447939_1448176_+	hypothetical protein	NA	NA	NA	NA
AUL10962.1\|1448363_1448681_-	virulence factor	NA	NA	NA	NA
AUL10963.1\|1448953_1449469_-	hypothetical protein	T1SAR8	Salmonella_phage	5.1e-06	44.6
AUL10964.1\|1449562_1449724_+	hypothetical protein	NA	NA	NA	NA
AUL10965.1\|1449739_1450495_-	GGDEF domain-containing protein	NA	NA	NA	NA
AUL10966.1\|1450833_1451040_+	hypothetical protein	NA	NA	NA	NA
AUL10967.1\|1451047_1451707_-	antibiotic resistance protein	NA	NA	NA	NA
AUL10968.1\|1452001_1454206_-	porin	NA	NA	NA	NA
AUL10969.1\|1454316_1455540_-	multidrug transporter	S4TR35	Salmonella_phage	9.8e-24	29.4
AUL10970.1\|1455662_1456637_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUL10971.1\|1456704_1457898_-	Rieske (2Fe-2S) protein	NA	NA	NA	NA
AUL10972.1\|1457912_1458713_-	siderophore ferric iron reductase	NA	NA	NA	NA
AUL10973.1\|1458709_1460566_-	IucA/IucC family protein	NA	NA	NA	NA
AUL10974.1\|1460562_1461168_-	siderophore biosynthesis protein	NA	NA	NA	NA
AUL10975.1\|1461186_1462572_-	alcaligin biosynthesis protein	NA	NA	NA	NA
AUL10976.1\|1463297_1464524_+	transporter	NA	NA	NA	NA
AUL10977.1\|1464612_1465395_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
AUL10978.1\|1465541_1466444_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL10979.1\|1466470_1467244_+	peroxide stress protein YaaA	NA	NA	NA	NA
AUL10980.1\|1467255_1468497_+	hypothetical protein	NA	NA	NA	NA
AUL10981.1\|1470326_1471229_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_11

1573064 : 1644169

Ectocarpus_siliculosus_virus(11.11%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL11074.1\|1573064_1574015_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11075.1\|1574036_1575257_+	YggW family oxidoreductase	NA	NA	NA	NA
AUL11076.1\|1575442_1576855_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
AUL11077.1\|1576918_1577986_+	PAS domain-containing sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	1.1e-05	23.5
AUL11078.1\|1577985_1579473_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA
AUL13191.1\|1579482_1580427_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL11079.1\|1580586_1581285_+	quercetin 2,3-dioxygenase	NA	NA	NA	NA
AUL11080.1\|1581362_1582268_+	hypothetical protein	NA	NA	NA	NA
AUL11081.1\|1582287_1583190_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11082.1\|1583336_1584131_-	ABC transporter	G9BWD6	Planktothrix_phage	8.3e-16	29.4
AUL11083.1\|1584135_1585806_-	iron ABC transporter permease	NA	NA	NA	NA
AUL11084.1\|1585929_1586979_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11085.1\|1587300_1588077_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
AUL11086.1\|1588141_1589044_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL11087.1\|1590337_1591141_+	2,5-didehydrogluconate reductase B	A0A2H4PQR8	Staphylococcus_phage	2.0e-33	32.4
AUL11088.1\|1593834_1594221_+	reactive intermediate/imine deaminase	NA	NA	NA	NA
AUL11089.1\|1594236_1596327_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
AUL11090.1\|1596378_1597332_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	7.2e-14	26.5
AUL13192.1\|1597346_1598234_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL11091.1\|1598371_1599898_+	methylmalonate-semialdehyde dehydrogenase (acylating)	NA	NA	NA	NA
AUL13193.1\|1599996_1600497_+	DNA starvation/stationary phase protection protein	W5S6G8	Pithovirus	6.4e-14	35.5
AUL11092.1\|1600820_1602776_-	capsular biosynthesis protein	NA	NA	NA	NA
AUL13194.1\|1605053_1605479_-	hypothetical protein	NA	NA	NA	NA
AUL11093.1\|1606694_1607465_+	polyhydroxyalkanoate biosynthesis repressor PhaR	NA	NA	NA	NA
AUL11094.1\|1607464_1608205_+	sugar ABC transporter ATP-binding protein	NA	NA	NA	NA
AUL11095.1\|1608246_1609416_+	capsule biosynthesis protein	NA	NA	NA	NA
AUL11096.1\|1609447_1611532_+	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA
AUL11097.1\|1611528_1612419_+	capsular biosynthesis protein	NA	NA	NA	NA
AUL11098.1\|1612415_1613513_+	capsule biosynthesis protein CapA	NA	NA	NA	NA
AUL11099.1\|1613535_1614825_+	Vi polysaccharide biosynthesis protein VipA/TviB	NA	NA	NA	NA
AUL11100.1\|1614836_1615862_+	LPS biosynthesis protein WbpP	A0A2K9L4U8	Tupanvirus	4.7e-72	44.2
AUL11101.1\|1615858_1617916_+	beta-3-deoxy-D-manno-oct-2-ulosonic acid transferase	NA	NA	NA	NA
AUL11102.1\|1617929_1619105_+	capsule biosynthesis protein CapA	NA	NA	NA	NA
AUL11103.1\|1619186_1620137_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11104.1\|1620195_1620969_+	short-chain dehydrogenase	NA	NA	NA	NA
AUL11105.1\|1620961_1622518_+	capsular biosynthesis protein	NA	NA	NA	NA
AUL11106.1\|1622514_1623465_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11107.1\|1624791_1625394_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUL11108.1\|1625633_1626335_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AUL11109.1\|1626328_1627111_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	A0A2R8FG22	Brazilian_cedratvirus	2.0e-09	25.8
AUL11110.1\|1627295_1628246_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11111.1\|1628344_1629082_-	hypothetical protein	A0A0S4KZH7	Pseudomonas_phage	4.1e-41	46.6
AUL11112.1\|1629271_1630030_-	short-chain dehydrogenase	NA	NA	NA	NA
AUL11113.1\|1630076_1631078_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11114.1\|1631243_1632212_-	phenol degradation protein meta	NA	NA	NA	NA
AUL11115.1\|1633751_1634720_+	AAA family ATPase	NA	NA	NA	NA
AUL11116.1\|1634728_1635670_+	MoxR protein	NA	NA	NA	NA
AUL13195.1\|1636143_1637154_+	hypothetical protein	NA	NA	NA	NA
AUL13197.1\|1637144_1638659_+	hypothetical protein	NA	NA	NA	NA
AUL11117.1\|1638655_1640002_+	hypothetical protein	NA	NA	NA	NA
AUL13196.1\|1640004_1641039_+	haloacid dehalogenase	NA	NA	NA	NA
AUL11118.1\|1641088_1642714_+	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	2.0e-149	52.2
AUL11119.1\|1642807_1643287_+	hypothetical protein	NA	NA	NA	NA
AUL11120.1\|1643266_1644169_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

1665008 : 1726355

uncultured_Caudovirales_phage(12.5%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL11137.1\|1665008_1665959_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11138.1\|1666067_1666256_+	hypothetical protein	NA	NA	NA	NA
AUL13200.1\|1666252_1666975_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-87	68.2
AUL11139.1\|1667413_1668601_-	hypothetical protein	NA	NA	NA	NA
AUL13201.1\|1668604_1668955_-	transcriptional regulator	NA	NA	NA	NA
AUL13202.1\|1670703_1671675_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11140.1\|1671688_1672402_+	3-oxoacyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA
AUL11141.1\|1672406_1673324_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL11142.1\|1673430_1673727_+	hypothetical protein	NA	NA	NA	NA
AUL11143.1\|1673873_1674776_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11144.1\|1675934_1678868_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA
AUL11145.1\|1678867_1679212_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA
AUL11146.1\|1679208_1680837_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA
AUL11147.1\|1680836_1681313_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA
AUL11148.1\|1681312_1681594_+	K+/H+ antiporter subunit F	NA	NA	NA	NA
AUL11149.1\|1681590_1681917_+	cation:proton antiporter	NA	NA	NA	NA
AUL11150.1\|1682072_1683023_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11151.1\|1683066_1683609_+	hypothetical protein	NA	NA	NA	NA
AUL11152.1\|1683706_1684555_+	hydrolase	NA	NA	NA	NA
AUL13203.1\|1684604_1685054_+\|tRNA	tRNA-specific adenosine deaminase	S4VYT2	Pandoravirus	2.0e-06	38.2
AUL11153.1\|1685050_1686052_+	LD-carboxypeptidase	NA	NA	NA	NA
AUL11154.1\|1686064_1686859_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUL11155.1\|1686907_1688809_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUL11156.1\|1688805_1689429_-	hypothetical protein	NA	NA	NA	NA
AUL11157.1\|1689555_1690680_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUL11158.1\|1691060_1692665_+	ABC-F family ATPase	A0A1V0SKJ1	Klosneuvirus	1.2e-53	28.9
AUL11159.1\|1692820_1693597_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-30	34.2
AUL11160.1\|1693681_1694680_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11161.1\|1694676_1695450_+	ABC transporter permease	NA	NA	NA	NA
AUL11162.1\|1696434_1697385_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11163.1\|1697408_1697873_-\|tRNA	glutamyl-tRNA amidotransferase	A0A0K2FLI9	Brevibacillus_phage	3.9e-05	32.4
AUL11164.1\|1698019_1699228_+	nitric oxide dioxygenase	NA	NA	NA	NA
AUL11165.1\|1699271_1699709_+	BadM/Rrf2 family transcriptional regulator	NA	NA	NA	NA
AUL11166.1\|1699827_1701117_+	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA
AUL11167.1\|1703857_1704760_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11168.1\|1704906_1705923_-	folate-binding protein YgfZ	NA	NA	NA	NA
AUL11169.1\|1706101_1707136_+	aminodeoxychorismate lyase	NA	NA	NA	NA
AUL11170.1\|1707132_1707759_+	dTMP kinase	A0A1L2BX49	Bacteriophage	1.6e-22	35.1
AUL11171.1\|1707755_1708808_+	DNA polymerase III subunit delta'	NA	NA	NA	NA
AUL11172.1\|1708857_1709628_+	DNAase	NA	NA	NA	NA
AUL11173.1\|1709678_1710515_+	hypothetical protein	NA	NA	NA	NA
AUL11174.1\|1710710_1711451_+	IclR family transcriptional regulator	NA	NA	NA	NA
AUL11175.1\|1711525_1712269_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11176.1\|1712930_1713704_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-31	37.7
AUL13204.1\|1714841_1716131_+	glutamate dehydrogenase	NA	NA	NA	NA
AUL11177.1\|1717741_1718989_-	Zn-dependent hydrolase	NA	NA	NA	NA
AUL11178.1\|1718998_1720708_-	thiamine pyrophosphate-binding protein	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.9e-35	27.3
AUL11179.1\|1720704_1721643_-	CoA ester lyase	NA	NA	NA	NA
AUL11180.1\|1721639_1722923_-	C4-dicarboxylate ABC transporter permease	NA	NA	NA	NA
AUL11181.1\|1722926_1723409_-	TRAP transporter small permease protein	NA	NA	NA	NA
AUL11182.1\|1723409_1724396_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11183.1\|1724568_1725288_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUL11184.1\|1725404_1726355_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

1834672 : 1905096

Klosneuvirus(22.22%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL11262.1\|1834672_1835575_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11263.1\|1835720_1836623_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11264.1\|1837896_1839114_+	hypothetical protein	NA	NA	NA	NA
AUL11265.1\|1839110_1840166_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
AUL11266.1\|1840170_1841073_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUL11267.1\|1841149_1842022_+	MOSC domain-containing protein	NA	NA	NA	NA
AUL11268.1\|1842152_1842521_+	aspartate 1-decarboxylase	NA	NA	NA	NA
AUL11269.1\|1842578_1843625_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
AUL11270.1\|1843820_1845077_+	amino acid dehydrogenase	NA	NA	NA	NA
AUL11271.1\|1845081_1846419_+	glycerol-3-phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11272.1\|1846568_1847525_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL11273.1\|1848982_1849348_+	hypothetical protein	NA	NA	NA	NA
AUL11274.1\|1849395_1850970_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11275.1\|1851022_1851967_+	peptide ABC transporter	NA	NA	NA	NA
AUL13212.1\|1851894_1852815_+	peptide ABC transporter permease	NA	NA	NA	NA
AUL11276.1\|1852807_1854442_+	microcin ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.2e-18	32.7
AUL11277.1\|1854438_1855794_+	amidase	NA	NA	NA	NA
AUL11278.1\|1856700_1858278_+	hypothetical protein	NA	NA	NA	NA
AUL11279.1\|1858281_1859556_+	hypothetical protein	NA	NA	NA	NA
AUL13213.1\|1859653_1860028_+	hypothetical protein	NA	NA	NA	NA
AUL11280.1\|1861743_1862877_+	general secretion pathway protein	NA	NA	NA	NA
AUL11281.1\|1862914_1863520_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
AUL11282.1\|1863516_1864335_+	hypothetical protein	NA	NA	NA	NA
AUL11283.1\|1864406_1867031_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-81	39.4
AUL11284.1\|1867017_1867272_+	hypothetical protein	NA	NA	NA	NA
AUL11285.1\|1867338_1867920_-	hypothetical protein	NA	NA	NA	NA
AUL11286.1\|1868223_1868484_+	30S ribosomal protein S16	NA	NA	NA	NA
AUL11287.1\|1868649_1869273_+	ribosome maturation factor RimM	NA	NA	NA	NA
AUL11288.1\|1869272_1870046_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AUL11289.1\|1870042_1871251_-	class V aminotransferase	NA	NA	NA	NA
AUL11290.1\|1871276_1871750_-	hypothetical protein	NA	NA	NA	NA
AUL11291.1\|1871823_1872774_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11292.1\|1872872_1873775_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11293.1\|1873920_1875270_-	two-component sensor histidine kinase	NA	NA	NA	NA
AUL11294.1\|1876035_1876791_+	hypothetical protein	NA	NA	NA	NA
AUL11295.1\|1876883_1879766_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.7e-138	37.1
AUL11296.1\|1880088_1880514_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.1e-21	43.2
AUL11297.1\|1880541_1881690_+	23S rRNA (adenine(2503)-C(2))-methyltransferase	NA	NA	NA	NA
AUL11298.1\|1881686_1882193_+	transcriptional regulator	NA	NA	NA	NA
AUL11299.1\|1882208_1883495_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	NA	NA	NA	NA
AUL13214.1\|1883544_1884840_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
AUL11300.1\|1884841_1885480_+	hypothetical protein	NA	NA	NA	NA
AUL13215.1\|1885485_1886643_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA
AUL11301.1\|1886669_1888025_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
AUL11302.1\|1888028_1889099_+	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	2.5e-15	25.7
AUL11303.1\|1889237_1889474_+	RNA chaperone Hfq	NA	NA	NA	NA
AUL11304.1\|1889561_1890668_+	GTPase HflX	NA	NA	NA	NA
AUL11305.1\|1890633_1891938_+	HflK protein	NA	NA	NA	NA
AUL11306.1\|1891956_1892856_+	HflC protein	NA	NA	NA	NA
AUL11307.1\|1893039_1894197_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA
AUL11308.1\|1894273_1895569_+	adenylosuccinate synthase	A0A160ER07	Powai_lake_megavirus	3.0e-63	33.5
AUL11309.1\|1895682_1896222_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
AUL11310.1\|1896499_1896712_+	30S ribosomal protein S21	NA	NA	NA	NA
AUL11311.1\|1896731_1898762_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.0e-65	41.9
AUL11312.1\|1899447_1901730_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	3.2e-36	30.1
AUL11313.1\|1902139_1902439_-	hypothetical protein	NA	NA	NA	NA
AUL11314.1\|1902723_1903137_+	transcriptional regulator	A0A222YXG1	Escherichia_phage	3.8e-36	59.0
AUL11315.1\|1903096_1904047_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11316.1\|1904145_1905096_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_14

1916347 : 1964758

Klosneuvirus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL11327.1\|1916347_1917250_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11328.1\|1917246_1918521_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	9.6e-14	28.9
AUL11329.1\|1918624_1919818_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
AUL11330.1\|1919814_1920468_+	alpha/beta hydrolase	NA	NA	NA	NA
AUL11331.1\|1920464_1921901_+	dethiobiotin synthase	NA	NA	NA	NA
AUL11332.1\|1921888_1922248_+	CidA/LrgA family protein	NA	NA	NA	NA
AUL11333.1\|1922333_1922984_+	hypothetical protein	NA	NA	NA	NA
AUL11334.1\|1923268_1924171_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11335.1\|1924269_1925133_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11336.1\|1925216_1927082_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AUL13219.1\|1927339_1928860_+	aldehyde dehydrogenase	NA	NA	NA	NA
AUL11337.1\|1928947_1929598_-	NAD(P)H dehydrogenase	NA	NA	NA	NA
AUL11338.1\|1930546_1931842_+	hypothetical protein	NA	NA	NA	NA
AUL11339.1\|1931863_1932748_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL13220.1\|1932846_1933722_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AUL11340.1\|1933711_1934068_-	RNA signal recognition particle	NA	NA	NA	NA
AUL11341.1\|1934198_1935173_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUL11342.1\|1935302_1935482_-	DUF3008 domain-containing protein	NA	NA	NA	NA
AUL11343.1\|1935624_1936104_+	hypothetical protein	NA	NA	NA	NA
AUL11344.1\|1936114_1936951_-	alpha/beta hydrolase	NA	NA	NA	NA
AUL11345.1\|1937063_1937435_+	transcriptional regulator	NA	NA	NA	NA
AUL11346.1\|1937431_1937983_+	ATPase	NA	NA	NA	NA
AUL11347.1\|1937998_1939690_-	sodium-independent anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	5.0e-42	27.3
AUL11348.1\|1939738_1940419_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUL11349.1\|1940666_1941131_-	hypothetical protein	NA	NA	NA	NA
AUL11350.1\|1941300_1942230_+	hypothetical protein	NA	NA	NA	NA
AUL13221.1\|1942242_1942836_-	hypothetical protein	NA	NA	NA	NA
AUL11351.1\|1942963_1944781_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-37	27.4
AUL11352.1\|1944864_1945815_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL13222.1\|1945913_1946393_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUL11353.1\|1946515_1947418_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11354.1\|1947436_1947784_-	aldehyde-activating protein	NA	NA	NA	NA
AUL11355.1\|1947812_1949252_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	7.4e-55	37.4
AUL11356.1\|1949270_1949666_-	hypothetical protein	NA	NA	NA	NA
AUL11357.1\|1949840_1950449_+	peptidase S16	NA	NA	NA	NA
AUL11358.1\|1950461_1951280_+	hypothetical protein	A0A1B1INV8	uncultured_Mediterranean_phage	2.3e-16	28.8
AUL11359.1\|1951231_1952206_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUL11360.1\|1952234_1953296_-	hypothetical protein	NA	NA	NA	NA
AUL11361.1\|1953292_1955509_-	aldehyde oxidase	NA	NA	NA	NA
AUL11362.1\|1955522_1955981_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
AUL11363.1\|1956138_1956483_-	hypothetical protein	NA	NA	NA	NA
AUL11364.1\|1956639_1957545_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL13223.1\|1957631_1958645_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AUL13224.1\|1960624_1961641_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL11365.1\|1961783_1963136_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	2.9e-45	27.6
AUL11366.1\|1963310_1963607_+	hypothetical protein	NA	NA	NA	NA
AUL11367.1\|1963753_1964758_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

1977191 : 2041511

Vibrio_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL11381.1\|1977191_1978142_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11382.1\|1978363_1979314_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11383.1\|1979412_1980378_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11384.1\|1980515_1981415_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL11385.1\|1981942_1983769_+	DUF3604 domain-containing protein	NA	NA	NA	NA
AUL11386.1\|1984126_1985497_+	hypothetical protein	NA	NA	NA	NA
AUL11387.1\|1985507_1986704_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AUL11388.1\|1986776_1988096_+	acyl--CoA ligase	NA	NA	NA	NA
AUL11389.1\|1988092_1988968_+	esterase	NA	NA	NA	NA
AUL11390.1\|1988998_1990147_-	carnitine dehydratase	NA	NA	NA	NA
AUL11391.1\|1990164_1990479_-	2Fe-2S ferredoxin	NA	NA	NA	NA
AUL11392.1\|1990500_1991223_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUL11393.1\|1991222_1992041_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUL11394.1\|1992045_1992573_-	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA
AUL11395.1\|1992578_1993835_-	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA
AUL11396.1\|1994193_1995333_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11397.1\|1995410_1996283_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUL11398.1\|1997201_1998104_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11399.1\|1998063_1998699_-	hypothetical protein	NA	NA	NA	NA
AUL11400.1\|1999058_2000381_-	isocitrate lyase	NA	NA	NA	NA
AUL11401.1\|2000699_2001521_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	4.1e-42	37.6
AUL11402.1\|2001456_2001798_-	hypothetical protein	NA	NA	NA	NA
AUL11403.1\|2001807_2002776_-	MFS transporter	NA	NA	NA	NA
AUL11404.1\|2002945_2003518_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
AUL11405.1\|2003557_2005387_-	excinuclease ABC subunit C	NA	NA	NA	NA
AUL11406.1\|2005349_2006408_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA
AUL11407.1\|2006445_2006907_-	holo-ACP synthase	NA	NA	NA	NA
AUL11408.1\|2006991_2007738_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
AUL11409.1\|2009228_2012459_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AUL11410.1\|2012525_2013857_-	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AUL11411.1\|2014109_2014484_-	DNA-binding protein	NA	NA	NA	NA
AUL11412.1\|2014586_2015765_-	hypothetical protein	NA	NA	NA	NA
AUL11413.1\|2015775_2016366_-	hypothetical protein	NA	NA	NA	NA
AUL13226.1\|2016476_2017283_+	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA
AUL11414.1\|2017308_2018103_-	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	5.1e-05	25.7
AUL11415.1\|2019103_2020078_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11416.1\|2020236_2020749_-	superoxide dismutase	Q9MC02	Salmonella_phage	1.8e-43	52.3
AUL11417.1\|2020905_2021877_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11418.1\|2023621_2024428_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUL11419.1\|2024424_2025726_-	malonyl-CoA decarboxylase	NA	NA	NA	NA
AUL11420.1\|2025676_2026441_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUL13227.1\|2026554_2027283_-	spermidine synthase	NA	NA	NA	NA
AUL11421.1\|2027408_2028596_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AUL11422.1\|2028668_2029043_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AUL11423.1\|2029143_2030406_-	glycine/betaine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.8e-28	36.6
AUL11424.1\|2030402_2031260_-	ABC transporter permease	NA	NA	NA	NA
AUL11425.1\|2031432_2032434_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11426.1\|2032885_2033788_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL13228.1\|2035399_2036551_+	Bcr/CflA family drug resistance efflux transporter	NA	NA	NA	NA
AUL11427.1\|2036919_2037156_+	50S ribosomal protein L28	NA	NA	NA	NA
AUL11428.1\|2037219_2037387_+	50S ribosomal protein L33	NA	NA	NA	NA
AUL11429.1\|2037500_2039306_-	sulfate transporter	A0A2H4J153	uncultured_Caudovirales_phage	2.2e-19	27.5
AUL11430.1\|2039559_2040462_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11431.1\|2040608_2041511_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

2173085 : 2222738

uncultured_Mediterranean_phage(16.67%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL11529.1\|2173085_2173988_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL13236.1\|2174134_2175532_-	rRNA methyltransferase	NA	NA	NA	NA
AUL11530.1\|2176188_2177154_+	riboflavin biosynthesis protein RibF	NA	NA	NA	NA
AUL11531.1\|2177143_2180005_+\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	1.0e-71	25.5
AUL11532.1\|2180007_2180514_+	signal peptidase II	NA	NA	NA	NA
AUL11533.1\|2180618_2181827_+	phosphopantothenate synthase	Q9HH70	Methanothermobacter_phage	3.8e-36	30.0
AUL11534.1\|2181828_2182767_-	hypothetical protein	NA	NA	NA	NA
AUL11535.1\|2182928_2183402_+	AsnC family transcriptional regulator	NA	NA	NA	NA
AUL11536.1\|2183398_2184349_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11537.1\|2184459_2184900_-	hypothetical protein	NA	NA	NA	NA
AUL11538.1\|2185028_2186258_-	lytic transglycosylase	NA	NA	NA	NA
AUL11539.1\|2186296_2187118_-	hypothetical protein	NA	NA	NA	NA
AUL11540.1\|2187171_2188323_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUL11541.1\|2188414_2188885_-	hypothetical protein	NA	NA	NA	NA
AUL11542.1\|2191453_2194003_+	cyanophycin synthetase	NA	NA	NA	NA
AUL11543.1\|2194073_2196647_+	cyanophycin synthetase	NA	NA	NA	NA
AUL11544.1\|2196912_2197113_+	general stress protein CsbD	NA	NA	NA	NA
AUL11545.1\|2197144_2197306_+	DUF1328 domain-containing protein	NA	NA	NA	NA
AUL11546.1\|2197363_2197702_+	phospholipid-binding protein	NA	NA	NA	NA
AUL11547.1\|2197850_2198753_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11548.1\|2199575_2200244_+	arylesterase	NA	NA	NA	NA
AUL13237.1\|2200225_2202181_-	peptidylprolyl isomerase	NA	NA	NA	NA
AUL11549.1\|2202423_2203173_+	glycerophosphodiester phosphodiesterase	A0A2H4PGQ5	Escherichia_phage	1.5e-14	27.8
AUL11550.1\|2203185_2204049_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
AUL11551.1\|2204052_2205468_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
AUL11552.1\|2205601_2206330_-	glutathione peroxidase	A0A1D8KSL1	Synechococcus_phage	9.6e-43	56.8
AUL11553.1\|2206468_2206669_-	heavy metal transporter	NA	NA	NA	NA
AUL11554.1\|2206844_2207243_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
AUL11555.1\|2207266_2208667_-	23S rRNA (uracil(1939)-C(5))-methyltransferase	A0A2K5B251	Erysipelothrix_phage	7.3e-31	26.5
AUL11556.1\|2208785_2209538_-	hypothetical protein	NA	NA	NA	NA
AUL11557.1\|2209826_2210426_-	hypothetical protein	NA	NA	NA	NA
AUL11558.1\|2210530_2211310_-	3'-5' exonuclease	NA	NA	NA	NA
AUL11559.1\|2211306_2212191_-	peptidase	A0A292GJG6	Xanthomonas_phage	4.6e-15	49.5
AUL11560.1\|2212208_2212988_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.8e-32	46.9
AUL11561.1\|2212972_2213731_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-68	51.2
AUL13238.1\|2213868_2214504_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AUL13239.1\|2214771_2215788_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL11562.1\|2215885_2216926_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.1e-91	51.3
AUL11563.1\|2217060_2218353_+	guanine permease	A0A0R6PHV4	Moraxella_phage	1.7e-66	36.0
AUL11564.1\|2219712_2220096_+	thiol reductase thioredoxin	V9SJ74	Achromobacter_phage	8.1e-09	25.8
AUL11565.1\|2220113_2220701_-	thymidylate synthase	A0A1X9I5T8	Streptococcus_phage	4.7e-16	35.8
AUL11566.1\|2220738_2221641_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11567.1\|2221787_2222738_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_17

2579608 : 2646059

uncultured_Caudovirales_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL11856.1\|2579608_2580511_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11857.1\|2580526_2580739_+	hypothetical protein	NA	NA	NA	NA
AUL11858.1\|2580880_2581453_+	flagellar basal body protein FliL	NA	NA	NA	NA
AUL11859.1\|2581455_2582466_+	flagellar motor switch protein FliM	NA	NA	NA	NA
AUL11860.1\|2582458_2582959_+	flagellar motor switch protein FliN	NA	NA	NA	NA
AUL11861.1\|2582969_2583311_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA
AUL13267.1\|2583379_2584114_+	flagellar biosynthetic protein FliP	NA	NA	NA	NA
AUL11862.1\|2584130_2584400_+	EscS/YscS/HrcS family type III secretion system export apparatus protein	NA	NA	NA	NA
AUL11863.1\|2584422_2585211_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA
AUL13268.1\|2585257_2586274_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL11864.1\|2586490_2587933_-	chemotaxis protein	A0A1B0V854	Salmonella_phage	1.0e-35	41.8
AUL11865.1\|2588111_2589731_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.5e-08	45.3
AUL11866.1\|2589851_2591672_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	6.4e-11	52.6
AUL11867.1\|2591750_2593283_-	flagellar hook-associated protein 3	NA	NA	NA	NA
AUL11868.1\|2593316_2594963_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA
AUL11869.1\|2595032_2596055_-	flagellar rod assembly protein/muramidase FlgJ	A0A088F6W1	Sulfitobacter_phage	1.9e-12	31.4
AUL11870.1\|2596072_2597206_-	flagellar biosynthesis protein FlgI	NA	NA	NA	NA
AUL11871.1\|2597208_2597898_-	flagellar basal body L-ring protein	NA	NA	NA	NA
AUL11872.1\|2597897_2598683_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA
AUL11873.1\|2598726_2599491_-	flagellar biosynthesis protein FlgF	NA	NA	NA	NA
AUL11874.1\|2599529_2600951_-	flagellar hook protein FlgE	NA	NA	NA	NA
AUL11875.1\|2601016_2601721_-	flagellar basal body rod modification protein	NA	NA	NA	NA
AUL11876.1\|2601768_2602188_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA
AUL11877.1\|2602200_2602608_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA
AUL13269.1\|2602791_2603502_+	flagella basal body P-ring formation protein FlgA	NA	NA	NA	NA
AUL11878.1\|2603628_2603919_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA
AUL11879.1\|2603936_2604419_+	flagellar protein FlgN	NA	NA	NA	NA
AUL11880.1\|2608924_2610079_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA
AUL13270.1\|2610384_2611401_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL11881.1\|2611647_2612436_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11882.1\|2612502_2613183_+	cysteine ABC transporter permease	NA	NA	NA	NA
AUL11883.1\|2613179_2613950_+	ATP-binding protein	G9BWD6	Planktothrix_phage	9.8e-30	39.1
AUL11884.1\|2614047_2614998_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11885.1\|2615053_2615971_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AUL11886.1\|2615981_2617160_-	mandelate racemase	NA	NA	NA	NA
AUL11887.1\|2617179_2618175_-	hypothetical protein	NA	NA	NA	NA
AUL11888.1\|2619763_2620372_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
AUL11889.1\|2620359_2621400_+	LacI family transcriptional regulator	NA	NA	NA	NA
AUL11890.1\|2621417_2622380_-	hypothetical protein	NA	NA	NA	NA
AUL11891.1\|2622376_2623570_-	CoA transferase	NA	NA	NA	NA
AUL11892.1\|2623566_2624364_-	citryl-CoA lyase	NA	NA	NA	NA
AUL11893.1\|2624389_2625376_-	hypothetical protein	NA	NA	NA	NA
AUL11894.1\|2625394_2627434_-	acetyl-CoA synthetase	NA	NA	NA	NA
AUL13271.1\|2627635_2628316_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUL11895.1\|2628329_2629241_-	CoA ester lyase	NA	NA	NA	NA
AUL11896.1\|2629237_2629816_-	NADPH-dependent FMN reductase	NA	NA	NA	NA
AUL11897.1\|2629954_2630860_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL11898.1\|2630867_2634287_+	nuclease	NA	NA	NA	NA
AUL11899.1\|2634274_2636875_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AUL11900.1\|2637830_2638463_-	PadR family transcriptional regulator	NA	NA	NA	NA
AUL11901.1\|2638856_2639615_+	hypothetical protein	NA	NA	NA	NA
AUL11902.1\|2639611_2640814_+	cardiolipin synthase B	NA	NA	NA	NA
AUL11903.1\|2640810_2641011_+	hypothetical protein	NA	NA	NA	NA
AUL11904.1\|2641001_2641952_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11905.1\|2642859_2644005_+	hypothetical protein	NA	NA	NA	NA
AUL11906.1\|2643991_2644747_+	alpha/beta hydrolase	NA	NA	NA	NA
AUL11907.1\|2644863_2645043_+	hypothetical protein	NA	NA	NA	NA
AUL11908.1\|2645108_2646059_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

2674219 : 2711582

Planktothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL11927.1\|2674219_2675122_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11928.1\|2675268_2676171_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11929.1\|2676263_2676803_+	peroxiredoxin	NA	NA	NA	NA
AUL11930.1\|2676909_2677254_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	3.0e-31	58.4
AUL11931.1\|2677311_2678760_-	carnitine dehydratase	NA	NA	NA	NA
AUL13274.1\|2678947_2679274_-	hypothetical protein	NA	NA	NA	NA
AUL11932.1\|2680910_2682089_+	hypothetical protein	NA	NA	NA	NA
AUL11933.1\|2682171_2682672_+	glutathione peroxidase	Q6VZR0	Canarypox_virus	4.7e-25	38.4
AUL11934.1\|2682781_2683483_+	thiol:disulfide oxidoreductase	NA	NA	NA	NA
AUL11935.1\|2683494_2683959_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUL11936.1\|2683973_2684249_+	biotin--protein ligase	NA	NA	NA	NA
AUL11937.1\|2684245_2685022_+	lipoate--protein ligase	NA	NA	NA	NA
AUL11938.1\|2685050_2685878_+	hypothetical protein	NA	NA	NA	NA
AUL11939.1\|2686003_2686474_+	hypothetical protein	NA	NA	NA	NA
AUL11940.1\|2686600_2687494_+	phosphatidylserine decarboxylase	NA	NA	NA	NA
AUL11941.1\|2687541_2688723_+	alpha-hydroxy-acid oxidizing enzyme	NA	NA	NA	NA
AUL11942.1\|2688735_2689551_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11943.1\|2689684_2690212_-	hypothetical protein	NA	NA	NA	NA
AUL13275.1\|2690208_2690706_-	hypothetical protein	NA	NA	NA	NA
AUL11944.1\|2690853_2691231_+	hypothetical protein	NA	NA	NA	NA
AUL11945.1\|2691188_2691473_+	hypothetical protein	NA	NA	NA	NA
AUL11946.1\|2691452_2692355_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL13276.1\|2692501_2693113_-	alpha/beta hydrolase	NA	NA	NA	NA
AUL11947.1\|2693347_2694475_+	leucine ABC transporter subunit substrate-binding protein LivK	NA	NA	NA	NA
AUL11948.1\|2694585_2695674_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	2.2e-19	31.2
AUL11949.1\|2695726_2696578_-	glycerol-3-phosphate transporter	NA	NA	NA	NA
AUL11950.1\|2696597_2697479_-	glycerol-3-phosphate transporter permease	NA	NA	NA	NA
AUL13277.1\|2697655_2698969_-	sn-glycerol-3-phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL11951.1\|2699179_2700013_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
AUL11952.1\|2700009_2700591_+	hypothetical protein	A0A2I7SAW6	Vibrio_phage	9.4e-17	37.3
AUL11953.1\|2700944_2701895_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11954.1\|2701910_2703026_+	leucine ABC transporter subunit substrate-binding protein LivK	NA	NA	NA	NA
AUL11955.1\|2703128_2704055_+	branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA
AUL11956.1\|2704054_2705293_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA
AUL11957.1\|2705289_2706057_+	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	A0A2H4PQG7	Staphylococcus_phage	1.2e-14	26.4
AUL11958.1\|2706057_2706759_+	branched-chain amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-17	30.4
AUL13278.1\|2706840_2707287_-	glutamate racemase	NA	NA	NA	NA
AUL11959.1\|2708176_2708815_+	glutathione S-transferase	NA	NA	NA	NA
AUL11960.1\|2709582_2710533_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL11961.1\|2710631_2711582_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_19

2841919 : 2907752

Pelagibacter_phage(16.67%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL12067.1\|2841919_2842870_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12068.1\|2843004_2844111_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL12069.1\|2844121_2845219_+	cyclic pyranopterin phosphate synthase	NA	NA	NA	NA
AUL12070.1\|2845363_2846569_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA
AUL12071.1\|2846575_2847097_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA
AUL13288.1\|2847093_2847576_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA
AUL12072.1\|2847581_2847833_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA
AUL12073.1\|2847813_2848299_-	molybdenum cofactor biosynthesis protein C	NA	NA	NA	NA
AUL12074.1\|2848434_2851896_+	hypothetical protein	NA	NA	NA	NA
AUL12075.1\|2851913_2852798_+	carboxymethylenebutenolidase	NA	NA	NA	NA
AUL12076.1\|2852807_2853239_-	hypothetical protein	NA	NA	NA	NA
AUL13289.1\|2853485_2853989_+	peroxiredoxin	M1I839	Pelagibacter_phage	1.8e-24	44.1
AUL12077.1\|2854066_2855467_+	MFS transporter	NA	NA	NA	NA
AUL12078.1\|2855541_2856417_-	hypothetical protein	NA	NA	NA	NA
AUL13290.1\|2856413_2857421_-	biotin synthase BioB	NA	NA	NA	NA
AUL12079.1\|2857888_2858194_+	hypothetical protein	NA	NA	NA	NA
AUL12080.1\|2858284_2858875_+	TetR family transcriptional regulator	NA	NA	NA	NA
AUL12081.1\|2860272_2862609_-	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.2e-124	42.8
AUL12082.1\|2862691_2863126_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
AUL12083.1\|2864272_2865223_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12084.1\|2865219_2866014_-	N-formylglutamate deformylase	NA	NA	NA	NA
AUL12085.1\|2866045_2866750_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUL12086.1\|2866824_2867625_-	hypothetical protein	NA	NA	NA	NA
AUL12087.1\|2867621_2868029_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
AUL12088.1\|2868025_2868667_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
AUL13291.1\|2868659_2870660_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
AUL12089.1\|2871920_2873252_+	arabinose ABC transporter permease	NA	NA	NA	NA
AUL12090.1\|2873248_2874151_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12091.1\|2875905_2876172_-	hypothetical protein	NA	NA	NA	NA
AUL12092.1\|2876879_2877218_+	transcriptional regulator	NA	NA	NA	NA
AUL12093.1\|2878546_2880826_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AUL12094.1\|2880803_2881508_-	hypothetical protein	NA	NA	NA	NA
AUL12095.1\|2881770_2882373_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUL12096.1\|2882469_2883759_+	MFS transporter	NA	NA	NA	NA
AUL12097.1\|2883816_2884548_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-12	31.0
AUL12098.1\|2884544_2885348_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.9e-14	23.5
AUL12099.1\|2885344_2886433_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AUL12100.1\|2886429_2887359_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUL12101.1\|2887507_2888653_-	branched chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL12102.1\|2888674_2889577_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12103.1\|2889955_2893777_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
AUL12104.1\|2893933_2894602_-	hypothetical protein	NA	NA	NA	NA
AUL12105.1\|2894606_2896280_-	paraquat-inducible protein B	NA	NA	NA	NA
AUL12106.1\|2896298_2897618_-	paraquat-inducible membrane protein A	NA	NA	NA	NA
AUL12107.1\|2897622_2899938_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.1e-164	41.9
AUL13292.1\|2899993_2902162_-	penicillin-binding protein 1C	NA	NA	NA	NA
AUL13293.1\|2902158_2906724_-	alpha-2-macroglobulin	NA	NA	NA	NA
AUL12108.1\|2907437_2907752_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-10	43.8

DBSCAN-SWA_20

2913982 : 2973315

Burkholderia_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL12115.1\|2913982_2914933_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12116.1\|2915213_2915834_+	flagellar motor protein MotA	NA	NA	NA	NA
AUL12117.1\|2915830_2916244_+	biopolymer transporter ExbD	NA	NA	NA	NA
AUL12118.1\|2916240_2917284_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AUL12119.1\|2917339_2917528_+	hypothetical protein	NA	NA	NA	NA
AUL12120.1\|2917537_2918302_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AUL12121.1\|2918392_2919049_+	adenylate kinase	NA	NA	NA	NA
AUL12122.1\|2919140_2919899_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AUL12123.1\|2919924_2921526_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
AUL12124.1\|2921726_2922731_+	iron dicitrate transport regulator FecR	NA	NA	NA	NA
AUL12125.1\|2922831_2923095_+	30S ribosomal protein S20	NA	NA	NA	NA
AUL12126.1\|2923212_2923989_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
AUL12127.1\|2924579_2925530_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12128.1\|2927913_2929026_-	malate dehydrogenase	NA	NA	NA	NA
AUL12129.1\|2929082_2930033_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12130.1\|2930241_2930463_-	hypothetical protein	NA	NA	NA	NA
AUL12131.1\|2930676_2932083_-	threonine synthase	NA	NA	NA	NA
AUL12132.1\|2932079_2933384_-	homoserine dehydrogenase	NA	NA	NA	NA
AUL12133.1\|2933380_2934568_-	alanine transaminase	NA	NA	NA	NA
AUL12134.1\|2934784_2935237_+	hypothetical protein	NA	NA	NA	NA
AUL12135.1\|2935239_2935704_+	peroxiredoxin	NA	NA	NA	NA
AUL12136.1\|2937566_2938544_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
AUL12137.1\|2938623_2939592_+	bile acid:sodium symporter	NA	NA	NA	NA
AUL12138.1\|2939612_2940986_-	replicative DNA helicase	C7BGG1	Burkholderia_phage	4.0e-135	58.2
AUL12139.1\|2940982_2941819_-	hypothetical protein	NA	NA	NA	NA
AUL12140.1\|2941935_2942391_-	50S ribosomal protein L9	NA	NA	NA	NA
AUL12141.1\|2942406_2942679_-	30S ribosomal protein S18	NA	NA	NA	NA
AUL12142.1\|2942771_2943095_-	primosomal replication protein N	NA	NA	NA	NA
AUL12143.1\|2943142_2943523_-	30S ribosomal protein S6	NA	NA	NA	NA
AUL12144.1\|2943742_2944540_-	GTP cyclohydrolase	NA	NA	NA	NA
AUL12145.1\|2944696_2946559_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
AUL12146.1\|2946608_2947520_-	geranyl transferase	NA	NA	NA	NA
AUL12147.1\|2947524_2947791_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
AUL13294.1\|2947877_2948708_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUL12148.1\|2948882_2949848_+	MFS transporter	NA	NA	NA	NA
AUL12149.1\|2950018_2951029_+	hypothetical protein	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	3.6e-16	24.6
AUL12150.1\|2951176_2952328_+	Rieske (2Fe-2S) protein	NA	NA	NA	NA
AUL12151.1\|2952411_2953275_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12152.1\|2953470_2954943_-	magnesium transporter	NA	NA	NA	NA
AUL12153.1\|2954953_2955364_-	acyl-CoA thioesterase	NA	NA	NA	NA
AUL12154.1\|2955427_2956474_-	hypothetical protein	NA	NA	NA	NA
AUL12155.1\|2956580_2957459_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL12156.1\|2957472_2958669_-	amidohydrolase	NA	NA	NA	NA
AUL12157.1\|2958730_2960422_+	long-chain fatty acid--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	9.4e-33	28.1
AUL12158.1\|2960418_2961321_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12159.1\|2961489_2962386_-	inositol monophosphatase	NA	NA	NA	NA
AUL12160.1\|2964663_2966889_+	glycosyl hydrolase	NA	NA	NA	NA
AUL12161.1\|2967053_2968142_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.7e-32	36.4
AUL12162.1\|2968098_2968752_+	DL-methionine transporter permease subunit	NA	NA	NA	NA
AUL12163.1\|2968799_2969597_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL12164.1\|2970176_2971079_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12165.1\|2971159_2972308_+	alcohol dehydrogenase	NA	NA	NA	NA
AUL12166.1\|2972364_2973315_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_21

3238665 : 3286282

Erwinia_phage(10.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL12376.1\|3238665_3239616_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12377.1\|3240060_3240372_-	cell division protein ZapA	NA	NA	NA	NA
AUL12378.1\|3240371_3240902_-	hypothetical protein	NA	NA	NA	NA
AUL12379.1\|3241064_3242015_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12380.1\|3242304_3242769_+	tricarboxylate transporter	NA	NA	NA	NA
AUL12381.1\|3242783_3244289_+	hypothetical protein	NA	NA	NA	NA
AUL12382.1\|3244545_3246150_+	gamma-glutamyltransferase	NA	NA	NA	NA
AUL12383.1\|3246205_3247111_+	oxidoreductase	NA	NA	NA	NA
AUL12384.1\|3247551_3248454_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12385.1\|3248600_3249503_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12386.1\|3249631_3250213_-	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA
AUL13311.1\|3250637_3250943_+	RND transporter	NA	NA	NA	NA
AUL12387.1\|3250956_3252291_-	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	3.5e-43	29.6
AUL12388.1\|3252312_3252852_-	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA
AUL12389.1\|3252999_3253464_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA
AUL12390.1\|3253606_3254722_-	cobalamin biosynthesis protein CobW	NA	NA	NA	NA
AUL12391.1\|3254998_3255502_-	transcriptional repressor	NA	NA	NA	NA
AUL12392.1\|3255639_3255840_+	hypothetical protein	NA	NA	NA	NA
AUL12393.1\|3255830_3256553_+	ABC transporter	A0A2R8FG22	Brazilian_cedratvirus	1.1e-11	30.0
AUL12394.1\|3256549_3257446_+	zinc ABC transporter permease	NA	NA	NA	NA
AUL12395.1\|3257442_3258378_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL12396.1\|3258338_3259007_+	hypothetical protein	NA	NA	NA	NA
AUL12397.1\|3258997_3259966_+	nickel transporter	NA	NA	NA	NA
AUL12398.1\|3260014_3262156_+	TonB-dependent receptor	NA	NA	NA	NA
AUL12399.1\|3262168_3263149_-	tyrosine recombinase XerC	A0A166YH27	Gordonia_phage	3.3e-14	30.5
AUL12400.1\|3263163_3263856_-	hypothetical protein	NA	NA	NA	NA
AUL12401.1\|3263882_3264794_-	diaminopimelate epimerase	NA	NA	NA	NA
AUL12402.1\|3264836_3265727_-	acyltransferase	NA	NA	NA	NA
AUL12403.1\|3265723_3266578_-	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA
AUL12404.1\|3266861_3268025_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	5.0e-126	60.8
AUL12405.1\|3268135_3268387_+	DUF1289 domain-containing protein	NA	NA	NA	NA
AUL12406.1\|3268466_3269507_+	alpha-mannosyltransferase	NA	NA	NA	NA
AUL12407.1\|3269786_3271205_+	adenosylhomocysteinase	S4VPF6	Pandoravirus	8.7e-40	29.4
AUL12408.1\|3271275_3271611_+	hypothetical protein	NA	NA	NA	NA
AUL12409.1\|3271610_3272453_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
AUL12410.1\|3272599_3273502_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12411.1\|3273566_3274538_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL12412.1\|3274601_3275621_-	acetylpolyamine amidohydrolase	A0A2K9L473	Tupanvirus	3.4e-22	31.7
AUL12413.1\|3275622_3276963_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL13312.1\|3277273_3277954_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
AUL13313.1\|3278029_3280093_+	lytic transglycosylase	A0A0S2SXL7	Bacillus_phage	5.3e-14	36.6
AUL12414.1\|3280089_3281184_+\|tRNA	CCA tRNA nucleotidyltransferase	A0A0F6YPT7	Sinorhizobium_phage	2.4e-50	50.5
AUL12415.1\|3281198_3282389_-	hypothetical protein	NA	NA	NA	NA
AUL12416.1\|3282477_3284166_-	RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.6e-48	32.9
AUL12417.1\|3284440_3285193_-	uracil-DNA glycosylase	A0A1Y0B680	Bovine_alphaherpesvirus	2.5e-46	47.5
AUL12418.1\|3285331_3286282_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_22

3404957 : 3450028

Staphylococcus_phage(16.67%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL12505.1\|3404957_3405860_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12506.1\|3406674_3407769_-	CoA transferase	NA	NA	NA	NA
AUL12507.1\|3407761_3409096_-	CoA ligase	NA	NA	NA	NA
AUL12508.1\|3409049_3409733_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUL12509.1\|3409758_3410922_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUL12510.1\|3410918_3411920_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUL12511.1\|3411919_3412792_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUL12512.1\|3412788_3413538_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-09	27.8
AUL12513.1\|3413534_3414326_-	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	1.7e-08	29.4
AUL12514.1\|3414322_3415462_-	ABC transporter	NA	NA	NA	NA
AUL12515.1\|3415737_3416523_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AUL12516.1\|3416556_3417339_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUL12517.1\|3417342_3417732_+	DNA-binding protein	NA	NA	NA	NA
AUL12518.1\|3418871_3419735_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA
AUL12519.1\|3419770_3420859_+	hypothetical protein	NA	NA	NA	NA
AUL12520.1\|3420855_3421758_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12521.1\|3422159_3425138_+	hypothetical protein	NA	NA	NA	NA
AUL12522.1\|3426064_3426943_+	fatty acid desaturase	NA	NA	NA	NA
AUL12523.1\|3426978_3427311_+	hypothetical protein	NA	NA	NA	NA
AUL12524.1\|3427289_3428792_+	hypothetical protein	A0A1V0S9J5	Catovirus	8.7e-14	45.3
AUL12525.1\|3428890_3429841_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12526.1\|3429837_3430305_-	ribonuclease HI	J9Q745	Salmonella_phage	5.6e-36	50.7
AUL12527.1\|3430347_3431118_-	SAM-dependent methyltransferase	NA	NA	NA	NA
AUL12528.1\|3431138_3431939_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AUL12529.1\|3431949_3433359_+	lytic transglycosylase	NA	NA	NA	NA
AUL12530.1\|3433453_3434239_+	enoyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA
AUL13320.1\|3434478_3435495_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL12531.1\|3435602_3435995_-	osmotically inducible protein OsmC	NA	NA	NA	NA
AUL12532.1\|3436132_3436813_+	hypothetical protein	NA	NA	NA	NA
AUL12533.1\|3436817_3437789_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL12534.1\|3437884_3438787_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12535.1\|3440339_3441041_+	two-component system response regulator OmpR	W8CYM9	Bacillus_phage	5.6e-32	36.6
AUL12536.1\|3441040_3442465_+	ATPase	NA	NA	NA	NA
AUL12537.1\|3443534_3444875_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AUL12538.1\|3444990_3446754_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	5.0e-162	50.0
AUL12539.1\|3446865_3447744_+	septum site-determining protein MinC	NA	NA	NA	NA
AUL12540.1\|3447856_3448672_+	septum site-determining protein MinD	NA	NA	NA	NA
AUL12541.1\|3448675_3448927_+	cell division topological specificity factor MinE	NA	NA	NA	NA
AUL13321.1\|3449011_3450028_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_23

3467772 : 3520177

Acinetobacter_phage(37.5%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL13323.1\|3467772_3468789_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL12551.1\|3468884_3469595_-	short-chain dehydrogenase	NA	NA	NA	NA
AUL13324.1\|3469591_3470581_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL12552.1\|3470676_3472308_+	acyl-CoA synthetase	NA	NA	NA	NA
AUL12553.1\|3472310_3473048_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUL12554.1\|3473203_3474076_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
AUL12555.1\|3474425_3475565_+	MFS transporter	NA	NA	NA	NA
AUL12556.1\|3475561_3476221_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
AUL12557.1\|3476292_3476925_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AUL12558.1\|3476954_3477473_+	flavin reductase	NA	NA	NA	NA
AUL12559.1\|3477483_3478593_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AUL12560.1\|3478639_3479494_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AUL12561.1\|3479495_3480398_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL12562.1\|3481620_3482571_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12563.1\|3482667_3483801_-	hypothetical protein	NA	NA	NA	NA
AUL12564.1\|3483837_3484086_-	hypothetical protein	NA	NA	NA	NA
AUL12565.1\|3484325_3485315_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12566.1\|3485490_3486279_-	indole-3-glycerol-phosphate synthase	A0A0P0IR83	Acinetobacter_phage	5.1e-66	53.0
AUL12567.1\|3486275_3487307_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	7.4e-73	42.7
AUL12568.1\|3487325_3487889_-	anthranilate/aminodeoxychorismate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.1e-65	62.1
AUL12569.1\|3487944_3489465_-	anthranilate synthase component I	S4VT78	Pandoravirus	9.0e-43	32.1
AUL12570.1\|3489728_3490433_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AUL12571.1\|3490440_3491169_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
AUL12572.1\|3491283_3491658_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
AUL12573.1\|3491700_3492990_+	hypothetical protein	NA	NA	NA	NA
AUL12574.1\|3492986_3494156_+	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA
AUL12575.1\|3494182_3494992_+	disulfide bond formation protein DsbC	NA	NA	NA	NA
AUL12576.1\|3495051_3495987_+	hydroxyacid dehydrogenase	A0A1J0F959	Only_Syngen_Nebraska_virus	6.4e-15	27.7
AUL12577.1\|3495999_3496950_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12578.1\|3497048_3498011_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	4.6e-93	64.5
AUL12579.1\|3498042_3498402_-	dihydroneopterin aldolase	NA	NA	NA	NA
AUL12580.1\|3498526_3499429_+	oxidoreductase	G3MA85	Bacillus_virus	1.9e-08	24.0
AUL13325.1\|3499430_3501197_-	peptidase M61	NA	NA	NA	NA
AUL12581.1\|3501237_3502014_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUL12582.1\|3503337_3504240_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12583.1\|3504454_3504868_+	hypothetical protein	NA	NA	NA	NA
AUL13326.1\|3505139_3505460_+	ABC transporter permease	NA	NA	NA	NA
AUL12584.1\|3505532_3506414_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
AUL12585.1\|3506530_3506773_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
AUL12586.1\|3506910_3507381_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
AUL12587.1\|3507393_3507933_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
AUL12588.1\|3507967_3509509_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
AUL12589.1\|3509607_3510513_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
AUL12590.1\|3510555_3511956_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
AUL12591.1\|3511965_3512388_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
AUL13327.1\|3512570_3513455_+	hypothetical protein	NA	NA	NA	NA
AUL12592.1\|3513530_3514607_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA
AUL12593.1\|3514913_3517016_+	primosomal protein N'	NA	NA	NA	NA
AUL12594.1\|3517058_3519128_+	ATP-dependent DNA helicase Rep	A7KV33	Bacillus_phage	2.6e-101	37.3
AUL12595.1\|3519226_3520177_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_24

3537342 : 3590046

Catovirus(10.0%)

tRNA,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL12606.1\|3537342_3538245_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12607.1\|3538585_3539536_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12608.1\|3539682_3540585_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12609.1\|3540881_3541379_+	hypothetical protein	NA	NA	NA	NA
AUL12610.1\|3541421_3543197_+	hypothetical protein	NA	NA	NA	NA
AUL12611.1\|3543204_3544071_+	copper resistance protein	NA	NA	NA	NA
AUL12612.1\|3544077_3544803_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUL12613.1\|3544972_3545203_+	hypothetical protein	NA	NA	NA	NA
AUL12614.1\|3545240_3545462_+	hypothetical protein	NA	NA	NA	NA
AUL12615.1\|3545981_3546752_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUL12616.1\|3547065_3547656_+	cysteine dioxygenase	NA	NA	NA	NA
AUL12617.1\|3547689_3549018_-	amidase	NA	NA	NA	NA
AUL12618.1\|3549092_3550238_-	transporter	NA	NA	NA	NA
AUL12619.1\|3550349_3551348_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12620.1\|3551310_3551745_+	carbon monoxide dehydrogenase	NA	NA	NA	NA
AUL12621.1\|3553261_3554146_+	EamA family transporter	NA	NA	NA	NA
AUL12622.1\|3554142_3555348_-	cardiolipin synthase B	NA	NA	NA	NA
AUL12623.1\|3555344_3556205_-	endonuclease	NA	NA	NA	NA
AUL12624.1\|3556317_3558108_-\|tRNA	aspartate--tRNA ligase	A0A1V0SAC0	Catovirus	6.5e-08	25.5
AUL13329.1\|3558148_3558793_-	hypothetical protein	A0A2I7S9X1	Vibrio_phage	8.5e-11	28.4
AUL12625.1\|3558814_3559123_-	FmdB family transcriptional regulator	NA	NA	NA	NA
AUL13330.1\|3559288_3560575_-	hypothetical protein	NA	NA	NA	NA
AUL12626.1\|3560701_3561961_-\|holin	choline dehydrogenase	A0A2I2L3D3	Orpheovirus	6.1e-13	27.6
AUL12627.1\|3562008_3562959_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12628.1\|3564910_3566125_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
AUL12629.1\|3566230_3567220_+	D-arabinose 5-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	4.3e-38	37.7
AUL12630.1\|3567216_3567825_+	phenylphosphate carboxylase subunit delta	E3T535	Cafeteria_roenbergensis_virus	5.2e-10	26.1
AUL12631.1\|3567837_3568467_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
AUL12632.1\|3568463_3569084_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
AUL12633.1\|3569115_3569907_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.5e-20	27.4
AUL12634.1\|3570260_3570482_+	ribosomal subunit interface protein	NA	NA	NA	NA
AUL12635.1\|3570758_3571214_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
AUL12636.1\|3571232_3572159_+	HPr kinase/phosphorylase	NA	NA	NA	NA
AUL12637.1\|3572212_3573499_-	alcohol dehydrogenase	NA	NA	NA	NA
AUL12638.1\|3574429_3575302_+	RNase adaptor protein RapZ	A0A1P8D5W0	Corynebacterium_phage	2.4e-08	34.5
AUL12639.1\|3575298_3576249_+	hypothetical protein	F5B3X9	Synechococcus_phage	6.9e-17	47.2
AUL12640.1\|3576395_3577298_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL13331.1\|3577402_3577633_-	hypothetical protein	NA	NA	NA	NA
AUL13332.1\|3577759_3578149_-	hypothetical protein	NA	NA	NA	NA
AUL12641.1\|3578165_3580547_-	dehydrogenase	NA	NA	NA	NA
AUL12642.1\|3580539_3581049_-	4-hydroxybenzoyl-CoA reductase subunit gamma	A0A0P0IVM8	Acinetobacter_phage	8.8e-19	37.3
AUL12643.1\|3581931_3582927_-	4,5-dihydroxyphthalate decarboxylase	NA	NA	NA	NA
AUL12644.1\|3582945_3583938_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL12645.1\|3584178_3584739_-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA	NA	NA	NA
AUL12646.1\|3584743_3585070_-	monothiol glutaredoxin, Grx4 family	NA	NA	NA	NA
AUL12647.1\|3585106_3585919_-	protein-(glutamine-N5) methyltransferase, release factor-specific	NA	NA	NA	NA
AUL12648.1\|3585929_3587012_-	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	3.3e-07	40.7
AUL12649.1\|3587098_3588373_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
AUL12650.1\|3589095_3590046_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_25

3708417 : 3751588

Streptococcus_phage(11.11%)

tRNA,transposase,integrase

attL 3746427:3746445|attR 3752211:3752229

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL12744.1\|3708417_3709320_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12745.1\|3709467_3710370_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12746.1\|3710366_3711002_-	lysine transporter LysE	NA	NA	NA	NA
AUL12747.1\|3711131_3712031_+	transcriptional regulator ArgP	NA	NA	NA	NA
AUL12748.1\|3712126_3712618_+	hypothetical protein	NA	NA	NA	NA
AUL12749.1\|3712664_3713630_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL12750.1\|3714763_3716005_+	2-aminoadipate aminotransferase	A0A1X9I5H2	Streptococcus_phage	1.9e-14	24.9
AUL12751.1\|3716118_3717135_+	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	3.5e-75	43.8
AUL12752.1\|3717169_3717646_-	hypothetical protein	NA	NA	NA	NA
AUL12753.1\|3717788_3718697_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA
AUL12754.1\|3718810_3719923_-	DNA protecting protein DprA	S6BFL3	Thermus_phage	1.9e-21	35.0
AUL13341.1\|3720023_3720509_-	AsnC family transcriptional regulator	NA	NA	NA	NA
AUL12755.1\|3720645_3721896_+	kynureninase	NA	NA	NA	NA
AUL12756.1\|3721997_3722510_+	peptide deformylase	E3SLL2	Synechococcus_phage	8.5e-22	43.3
AUL12757.1\|3722656_3723559_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12758.1\|3723624_3724563_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.4e-09	35.7
AUL12759.1\|3724585_3725212_-	flavin-nucleotide-binding protein	NA	NA	NA	NA
AUL12760.1\|3725208_3725865_-	HAD family hydrolase	NA	NA	NA	NA
AUL12761.1\|3725861_3726464_-	hypothetical protein	NA	NA	NA	NA
AUL12762.1\|3726470_3727058_-	Rossman fold protein, TIGR00730 family	A0A2I2L3F0	Orpheovirus	1.1e-07	23.3
AUL12763.1\|3727238_3727808_+	bacterioferritin	NA	NA	NA	NA
AUL12764.1\|3727878_3729198_-	ribosomal protein S12 methylthiotransferase	NA	NA	NA	NA
AUL12765.1\|3729304_3729496_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AUL12766.1\|3729747_3731037_+	glycine/D-amino acid oxidase	NA	NA	NA	NA
AUL12767.1\|3731191_3732187_+	hypothetical protein	NA	NA	NA	NA
AUL12768.1\|3732271_3732946_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUL12769.1\|3732942_3733845_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12770.1\|3734054_3735296_+	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	4.0e-25	25.2
AUL12771.1\|3735292_3736237_+	arginase	A0A0N9R043	Chrysochromulina_ericina_virus	9.5e-27	33.3
AUL12772.1\|3736403_3737306_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12773.1\|3737265_3738195_-	hypothetical protein	NA	NA	NA	NA
AUL12774.1\|3738248_3738584_-	alkylhydroperoxidase	NA	NA	NA	NA
AUL12775.1\|3738628_3739393_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUL12776.1\|3739416_3740157_-	transcriptional regulator	NA	NA	NA	NA
AUL12777.1\|3740164_3741718_-	long-chain fatty acid--CoA ligase	A0A2K9L3I8	Tupanvirus	1.5e-13	22.6
AUL12778.1\|3741752_3742730_-	hypothetical protein	NA	NA	NA	NA
AUL12779.1\|3743002_3743584_-	ureidoglycolate hydrolase	NA	NA	NA	NA
AUL12780.1\|3743635_3750769_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
3746427:3746445	attL	NA	NA	NA	NA
AUL12781.1\|3750984_3751116_-	entericidin	NA	NA	NA	NA
AUL13342.1\|3751147_3751273_-	hypothetical protein	NA	NA	NA	NA
AUL12782.1\|3751381_3751588_-\|integrase	integrase	NA	NA	NA	NA
3752211:3752229	attR	NA	NA	NA	NA

DBSCAN-SWA_26

3757522 : 3793197

Burkholderia_phage(11.11%)

transposase,integrase

attL 3754061:3754078|attR 3798701:3798718

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3754061:3754078	attL	NA	NA	NA	NA
AUL12789.1\|3757522_3758425_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12790.1\|3758435_3759077_+	hypothetical protein	NA	NA	NA	NA
AUL12791.1\|3759243_3759486_+	hypothetical protein	NA	NA	NA	NA
AUL12792.1\|3759632_3760535_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12793.1\|3760570_3761038_+	hypothetical protein	Q3HQX1	Burkholderia_phage	2.1e-43	71.3
AUL12794.1\|3761271_3761649_+	hypothetical protein	NA	NA	NA	NA
AUL12795.1\|3761645_3761828_+	hypothetical protein	NA	NA	NA	NA
AUL12796.1\|3761831_3762818_+	DNA recombinase	H9C0R8	Aeromonas_phage	2.0e-67	57.3
AUL12797.1\|3762814_3763462_+	exonuclease	A0A0U2BXF3	Paracoccus_phage	2.0e-31	41.4
AUL12798.1\|3763519_3764047_+	hypothetical protein	NA	NA	NA	NA
AUL12799.1\|3764083_3765268_+	hypothetical protein	A0A291L9X3	Bordetella_phage	1.5e-24	37.8
AUL12800.1\|3765278_3765620_+	hypothetical protein	A0A0H5ARN8	Pseudomonas_phage	1.0e-10	45.3
AUL12801.1\|3765612_3765732_+	hypothetical protein	NA	NA	NA	NA
AUL12802.1\|3765732_3765933_+	hypothetical protein	NA	NA	NA	NA
AUL12803.1\|3765929_3766919_-\|integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	4.4e-75	44.4
AUL12804.1\|3768405_3770376_-	hypothetical protein	NA	NA	NA	NA
AUL12805.1\|3770617_3771016_+	hypothetical protein	NA	NA	NA	NA
AUL12806.1\|3771024_3771948_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL12807.1\|3772453_3773356_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12808.1\|3773586_3775278_-	membrane protein insertase YidC	NA	NA	NA	NA
AUL12809.1\|3775326_3775599_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.0e-15	52.2
AUL12810.1\|3775595_3775967_-	ribonuclease P protein component	NA	NA	NA	NA
AUL12811.1\|3776062_3776197_-	50S ribosomal protein L34	NA	NA	NA	NA
AUL12812.1\|3776602_3778012_+	chromosomal replication initiation protein DnaA	NA	NA	NA	NA
AUL12813.1\|3778014_3779124_+	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	1.2e-41	32.6
AUL12814.1\|3779218_3781672_+	DNA gyrase subunit B	G3M9Z3	Bacillus_virus	2.3e-112	34.8
AUL12815.1\|3781790_3782582_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUL12816.1\|3782701_3784129_+	amidase	NA	NA	NA	NA
AUL13343.1\|3784167_3785139_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL12817.1\|3785223_3785427_+	hypothetical protein	NA	NA	NA	NA
AUL12818.1\|3785557_3786721_+	alpha-hydroxy-acid oxidizing enzyme	NA	NA	NA	NA
AUL12819.1\|3786808_3787654_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUL12820.1\|3789258_3790161_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AUL12821.1\|3790157_3790502_-	hypothetical protein	NA	NA	NA	NA
AUL12822.1\|3790715_3791090_-	MerR family transcriptional regulator	NA	NA	NA	NA
AUL12823.1\|3791164_3792223_+	Zn-dependent hydrolase	NA	NA	NA	NA
AUL12824.1\|3792246_3793197_-\|transposase	IS481 family transposase	NA	NA	NA	NA
3798701:3798718	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP018042

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection