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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP018891 Bordetella holmesii isolate F616 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 25 0

Results visualization

1. CP018891
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 148265 : 195149 49 uncultured_Mediterranean_phage(22.22%) protease,transposase NA
DBSCAN-SWA_2 226939 : 263753 32 Leptospira_phage(40.0%) transposase NA
DBSCAN-SWA_3 587415 : 656249 59 Staphylococcus_phage(21.43%) transposase,tRNA NA
DBSCAN-SWA_4 659557 : 724604 58 Ralstonia_virus(42.86%) transposase,tRNA NA
DBSCAN-SWA_5 800268 : 855180 53 Ralstonia_virus(16.67%) transposase,holin NA
DBSCAN-SWA_6 864874 : 919437 52 Ralstonia_virus(28.57%) transposase NA
DBSCAN-SWA_7 929935 : 994304 49 Ralstonia_virus(44.44%) transposase,tRNA NA
DBSCAN-SWA_8 1096085 : 1128247 33 Ralstonia_virus(33.33%) protease,transposase NA
DBSCAN-SWA_9 1133899 : 1194681 53 Leptospira_phage(23.53%) protease,transposase,tRNA NA
DBSCAN-SWA_10 1202708 : 1265122 55 Ralstonia_virus(28.57%) protease,transposase,tRNA NA
DBSCAN-SWA_11 1274469 : 1320843 46 Ralstonia_virus(20.0%) transposase,holin,tRNA NA
DBSCAN-SWA_12 1555692 : 1612826 45 Leptospira_phage(15.79%) transposase,tRNA NA
DBSCAN-SWA_13 1630084 : 1677083 47 Ralstonia_virus(20.0%) transposase,tRNA NA
DBSCAN-SWA_14 1681285 : 1801146 116 Leptospira_phage(16.67%) transposase,integrase,holin,tRNA attL 1718700:1718759|attR 1796179:1796517
DBSCAN-SWA_15 1964342 : 2020746 46 Leptospira_phage(22.22%) transposase,integrase attL 1959026:1959041|attR 1988981:1988996
DBSCAN-SWA_16 2061006 : 2130802 54 Ralstonia_virus(17.65%) transposase NA
DBSCAN-SWA_17 2140582 : 2200903 60 Ralstonia_virus(21.43%) protease,transposase,tRNA NA
DBSCAN-SWA_18 2283154 : 2341566 50 Shigella_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_19 2357476 : 2383873 21 Leptospira_phage(21.43%) protease,transposase NA
DBSCAN-SWA_20 2465870 : 2509697 35 Shigella_phage(40.0%) protease,transposase,tRNA NA
DBSCAN-SWA_21 2548518 : 2649238 97 Ralstonia_virus(15.79%) transposase,tRNA NA
DBSCAN-SWA_22 2930400 : 3031219 83 Ralstonia_virus(20.0%) transposase,tRNA NA
DBSCAN-SWA_23 3090076 : 3145374 40 Ralstonia_virus(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_24 3344583 : 3411304 60 Synechococcus_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_25 3605054 : 3653755 39 Catovirus(20.0%) transposase,holin,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage