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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP018893 Bordetella holmesii isolate F621 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 24 0

Results visualization

1. CP018893
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 148265 : 195149 49 uncultured_Mediterranean_phage(22.22%) transposase,protease NA
DBSCAN-SWA_2 226939 : 263753 32 Leptospira_phage(40.0%) transposase NA
DBSCAN-SWA_3 587472 : 656306 59 Staphylococcus_phage(21.43%) transposase,tRNA NA
DBSCAN-SWA_4 659614 : 724661 58 Ralstonia_virus(42.86%) transposase,tRNA NA
DBSCAN-SWA_5 799275 : 854187 53 Ralstonia_virus(16.67%) transposase,holin NA
DBSCAN-SWA_6 863881 : 918444 52 Ralstonia_virus(28.57%) transposase NA
DBSCAN-SWA_7 928942 : 993310 49 Ralstonia_virus(44.44%) transposase,tRNA NA
DBSCAN-SWA_8 1095093 : 1127255 33 Ralstonia_virus(33.33%) transposase,protease NA
DBSCAN-SWA_9 1132907 : 1193689 53 Leptospira_phage(23.53%) transposase,protease,tRNA NA
DBSCAN-SWA_10 1201716 : 1319849 114 Ralstonia_virus(21.43%) transposase,protease,holin,tRNA NA
DBSCAN-SWA_11 1554697 : 1611831 45 Leptospira_phage(15.79%) transposase,tRNA NA
DBSCAN-SWA_12 1629089 : 1676088 47 Ralstonia_virus(20.0%) transposase,tRNA NA
DBSCAN-SWA_13 1680290 : 1800151 116 Leptospira_phage(16.67%) integrase,transposase,holin,tRNA attL 1717705:1717764|attR 1795184:1795522
DBSCAN-SWA_14 1963347 : 2019957 46 Leptospira_phage(22.22%) integrase,transposase attL 1958031:1958046|attR 1988192:1988207
DBSCAN-SWA_15 2060217 : 2130013 54 Ralstonia_virus(17.65%) transposase NA
DBSCAN-SWA_16 2139793 : 2200114 60 Ralstonia_virus(21.43%) transposase,protease,tRNA NA
DBSCAN-SWA_17 2282366 : 2340778 50 Shigella_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_18 2356688 : 2391871 34 Leptospira_phage(20.0%) transposase,protease NA
DBSCAN-SWA_19 2473868 : 2517696 35 Shigella_phage(40.0%) transposase,protease,tRNA NA
DBSCAN-SWA_20 2556517 : 2657237 97 Ralstonia_virus(15.79%) transposase,tRNA NA
DBSCAN-SWA_21 2938660 : 3039478 83 Ralstonia_virus(20.0%) transposase,tRNA NA
DBSCAN-SWA_22 3098335 : 3153634 39 Ralstonia_virus(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_23 3353755 : 3419563 60 Synechococcus_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_24 3613315 : 3662016 39 Catovirus(20.0%) transposase,holin,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage