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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP018892 Bordetella holmesii isolate F617 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 23 0

Results visualization

1. CP018892
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 179305 : 227795 46 Ralstonia_virus(20.0%) transposase NA
DBSCAN-SWA_2 588464 : 657298 59 Staphylococcus_phage(21.43%) transposase,tRNA NA
DBSCAN-SWA_3 660606 : 725653 58 Ralstonia_virus(42.86%) transposase,tRNA NA
DBSCAN-SWA_4 800268 : 855180 53 Ralstonia_virus(16.67%) holin,transposase NA
DBSCAN-SWA_5 864874 : 919437 52 Ralstonia_virus(28.57%) transposase NA
DBSCAN-SWA_6 929935 : 994304 49 Ralstonia_virus(44.44%) transposase,tRNA NA
DBSCAN-SWA_7 1096087 : 1128249 33 Ralstonia_virus(33.33%) protease,transposase NA
DBSCAN-SWA_8 1133901 : 1194683 53 Leptospira_phage(23.53%) protease,transposase,tRNA NA
DBSCAN-SWA_9 1202710 : 1265124 55 Ralstonia_virus(28.57%) protease,transposase,tRNA NA
DBSCAN-SWA_10 1274471 : 1320845 46 Ralstonia_virus(20.0%) holin,transposase,tRNA NA
DBSCAN-SWA_11 1553788 : 1613877 48 Leptospira_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_12 1631135 : 1741248 106 Ralstonia_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_13 1751652 : 1845077 88 Ralstonia_virus(23.53%) holin,transposase,integrase attL 1762093:1762152|attR 1839234:1839629
DBSCAN-SWA_14 1965394 : 2022004 46 Leptospira_phage(22.22%) transposase,integrase attL 1960078:1960093|attR 1990239:1990254
DBSCAN-SWA_15 2129890 : 2185559 60 uncultured_Mediterranean_phage(14.29%) protease,transposase,tRNA NA
DBSCAN-SWA_16 2283364 : 2341776 50 Shigella_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_17 2357686 : 2392869 34 Leptospira_phage(20.0%) protease,transposase NA
DBSCAN-SWA_18 2474866 : 2518694 35 Shigella_phage(40.0%) protease,transposase,tRNA NA
DBSCAN-SWA_19 2557515 : 2658235 97 Ralstonia_virus(15.79%) transposase,tRNA NA
DBSCAN-SWA_20 2939386 : 3039155 82 Ralstonia_virus(20.0%) transposase,tRNA NA
DBSCAN-SWA_21 3098012 : 3153310 40 Ralstonia_virus(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_22 3353432 : 3419239 60 Synechococcus_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_23 3612977 : 3661678 39 Catovirus(20.0%) holin,transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage