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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP018894 Bordetella holmesii isolate F626 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 24 0

Results visualization

1. CP018894
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 148265 : 195149 49 uncultured_Mediterranean_phage(22.22%) protease,transposase NA
DBSCAN-SWA_2 226939 : 263753 32 Leptospira_phage(40.0%) transposase NA
DBSCAN-SWA_3 587431 : 656265 59 Staphylococcus_phage(21.43%) tRNA,transposase NA
DBSCAN-SWA_4 659573 : 724620 58 Ralstonia_virus(42.86%) tRNA,transposase NA
DBSCAN-SWA_5 799235 : 854147 53 Ralstonia_virus(16.67%) holin,transposase NA
DBSCAN-SWA_6 863841 : 918403 52 Ralstonia_virus(28.57%) transposase NA
DBSCAN-SWA_7 928901 : 993270 49 Ralstonia_virus(44.44%) tRNA,transposase NA
DBSCAN-SWA_8 1095053 : 1127215 33 Ralstonia_virus(33.33%) protease,transposase NA
DBSCAN-SWA_9 1132867 : 1193649 53 Leptospira_phage(23.53%) protease,tRNA,transposase NA
DBSCAN-SWA_10 1201676 : 1264090 55 Ralstonia_virus(28.57%) protease,tRNA,transposase NA
DBSCAN-SWA_11 1273437 : 1319811 46 Ralstonia_virus(20.0%) holin,tRNA,transposase NA
DBSCAN-SWA_12 1554659 : 1611793 45 Leptospira_phage(15.79%) tRNA,transposase NA
DBSCAN-SWA_13 1629051 : 1676050 47 Ralstonia_virus(20.0%) tRNA,transposase NA
DBSCAN-SWA_14 1680252 : 1800113 116 Leptospira_phage(16.67%) holin,integrase,tRNA,transposase attL 1717667:1717726|attR 1795146:1795484
DBSCAN-SWA_15 1963309 : 2019919 46 Leptospira_phage(22.22%) integrase,transposase attL 1957993:1958008|attR 1988154:1988169
DBSCAN-SWA_16 2127805 : 2183474 60 uncultured_Mediterranean_phage(14.29%) protease,tRNA,transposase NA
DBSCAN-SWA_17 2281279 : 2339691 50 Shigella_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_18 2355601 : 2390784 34 Leptospira_phage(20.0%) protease,transposase NA
DBSCAN-SWA_19 2472781 : 2516609 35 Shigella_phage(40.0%) protease,tRNA,transposase NA
DBSCAN-SWA_20 2555430 : 2656150 97 Ralstonia_virus(15.79%) tRNA,transposase NA
DBSCAN-SWA_21 2937304 : 3038123 83 Ralstonia_virus(20.0%) tRNA,transposase NA
DBSCAN-SWA_22 3096980 : 3152279 39 Ralstonia_virus(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_23 3352401 : 3417994 60 Synechococcus_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_24 3611744 : 3660445 39 Catovirus(20.0%) holin,tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage