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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP018899 Bordetella holmesii isolate F615 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 22 0

Results visualization

1. CP018899
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 148531 : 195415 49 uncultured_Mediterranean_phage(22.22%) protease,transposase NA
DBSCAN-SWA_2 227205 : 264019 32 Leptospira_phage(40.0%) transposase NA
DBSCAN-SWA_3 584565 : 653399 59 Staphylococcus_phage(21.43%) tRNA,transposase NA
DBSCAN-SWA_4 656707 : 721753 58 Ralstonia_virus(42.86%) tRNA,transposase NA
DBSCAN-SWA_5 796631 : 844200 47 Leptospira_phage(11.11%) transposase,holin NA
DBSCAN-SWA_6 849338 : 902086 47 Ralstonia_virus(26.67%) transposase NA
DBSCAN-SWA_7 1092764 : 1190002 91 Ralstonia_virus(16.67%) tRNA,protease,transposase NA
DBSCAN-SWA_8 1198029 : 1259127 55 Ralstonia_virus(21.43%) tRNA,protease,transposase NA
DBSCAN-SWA_9 1268474 : 1314847 46 Ralstonia_virus(20.0%) tRNA,transposase,holin NA
DBSCAN-SWA_10 1549669 : 1606803 45 Leptospira_phage(15.79%) tRNA,transposase NA
DBSCAN-SWA_11 1624061 : 1671060 47 Ralstonia_virus(20.0%) tRNA,transposase NA
DBSCAN-SWA_12 1675262 : 1795126 114 Leptospira_phage(17.39%) tRNA,integrase,transposase,holin attL 1703448:1703507|attR 1788910:1790218
DBSCAN-SWA_13 1958316 : 2015676 49 Leptospira_phage(22.22%) integrase,transposase attL 1952999:1953014|attR 1984210:1984225
DBSCAN-SWA_14 2123901 : 2179570 60 uncultured_Mediterranean_phage(14.29%) tRNA,protease,transposase NA
DBSCAN-SWA_15 2261227 : 2303380 41 Planktothrix_phage(25.0%) transposase NA
DBSCAN-SWA_16 2327928 : 2438758 103 Escherichia_phage(12.5%) tRNA,protease,transposase NA
DBSCAN-SWA_17 2470705 : 2514571 35 Shigella_phage(40.0%) tRNA,protease,transposase NA
DBSCAN-SWA_18 2553391 : 2654112 95 Leptospira_phage(17.65%) tRNA,transposase NA
DBSCAN-SWA_19 2934234 : 3034004 83 Ralstonia_virus(20.0%) tRNA,transposase NA
DBSCAN-SWA_20 3065348 : 3117761 43 Synechococcus_phage(20.0%) tRNA,protease,transposase NA
DBSCAN-SWA_21 3340407 : 3407116 60 Synechococcus_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_22 3600860 : 3651024 40 Catovirus(18.18%) tRNA,transposase,holin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage