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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP018895 Bordetella holmesii isolate H656 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 24 0

Results visualization

1. CP018895
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 149310 : 195927 49 uncultured_Mediterranean_phage(22.22%) protease,transposase NA
DBSCAN-SWA_2 227717 : 264531 32 Leptospira_phage(40.0%) transposase NA
DBSCAN-SWA_3 586685 : 655519 59 Staphylococcus_phage(21.43%) tRNA,transposase NA
DBSCAN-SWA_4 658827 : 723874 58 Ralstonia_virus(42.86%) tRNA,transposase NA
DBSCAN-SWA_5 798482 : 903672 100 Ralstonia_virus(18.52%) holin,transposase NA
DBSCAN-SWA_6 917580 : 992193 58 Ralstonia_virus(36.36%) tRNA,transposase NA
DBSCAN-SWA_7 1095269 : 1206679 91 Ralstonia_virus(23.08%) transposase,protease NA
DBSCAN-SWA_8 1228512 : 1264953 36 Ralstonia_virus(22.22%) transposase NA
DBSCAN-SWA_9 1423866 : 1592095 159 Ralstonia_virus(18.52%) integrase,transposase,tRNA,holin attL 1498941:1499000|attR 1592118:1592880
DBSCAN-SWA_10 1607714 : 1663272 60 Leptospira_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_11 1915653 : 1982808 58 Ralstonia_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_12 1991402 : 2043035 45 Lake_Baikal_phage(13.33%) holin,protease,tRNA,transposase NA
DBSCAN-SWA_13 2055194 : 2103726 45 Ralstonia_virus(13.33%) transposase NA
DBSCAN-SWA_14 2109140 : 2160945 56 Leptospira_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_15 2167338 : 2216903 54 Ralstonia_virus(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_16 2280422 : 2338834 50 Shigella_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_17 2354744 : 2389924 34 Leptospira_phage(20.0%) transposase,protease NA
DBSCAN-SWA_18 2470722 : 2514589 35 Shigella_phage(40.0%) tRNA,protease,transposase NA
DBSCAN-SWA_19 2531679 : 2599198 59 Ralstonia_virus(12.5%) tRNA,transposase NA
DBSCAN-SWA_20 2603294 : 2654032 53 Leptospira_phage(37.5%) tRNA,transposase NA
DBSCAN-SWA_21 2935185 : 3034954 82 Ralstonia_virus(20.0%) tRNA,transposase NA
DBSCAN-SWA_22 3093811 : 3149111 39 Ralstonia_virus(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_23 3348282 : 3415865 60 Leptospira_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_24 3608755 : 3657456 39 Catovirus(20.0%) tRNA,transposase,holin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage