CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP024053	Escherichia coli strain SMN197SH3 plasmid pO177C3, complete sequence	0 crisprs	NA	0	0
CP024054	Escherichia coli strain SMN197SH3 plasmid pO177B3, complete sequence	0 crisprs	NA	0	0
CP024056	Escherichia coli strain SMN197SH3 chromosome, complete genome	7 crisprs	csa3,cas3,cas8e,cas7,cas6e,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol	6	17
CP024055	Escherichia coli strain SMN197SH3 plasmid pO177A3, complete sequence	0 crisprs	NA	0	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP024056_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024056_1

641028-641148

Orphan

Consensus_repeat	Method
TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGGGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024056_1

>merge|CP024056|1|641028-641148|CRISPRCasFinder
TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGGGTGCTCAACTTGTTGATGTTGTTGTGTTTTGTACCTGATGCCGGATGCGATGCTGGCGCATCTTATCCGGCCTACGGGGTG

>CP024056|1|1|641028-641148|CRISPRCasFinder
TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGGGTG	CTCAACTTGTTGATGTTGTTGTGTTTTGTACCTGA
TGCCGGATGCGATGCTGGCGCATCTTATCCGGCCTACGGGGTG

Protein	Signature genes	Signature genes Name	Protein_function
CP024056.1\|AUL83391.1\|638337_639669_+\|transporter	unknown	unknown	gnl\|CDD\|273283
CP024056.1\|AUL83388.1\|634117_636226_+\|formate-C-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
CP024056.1\|AUL83383.1\|629285_630224_+\|transcriptional-regulator-TdcA	unknown	unknown	gnl\|CDD\|182391
CP024056.1\|AUL83392.1\|639696_641007_+\|serine-dehydratase-subunit-alpha-family-protein	unknown	unknown	gnl\|CDD\|226206
CP024056.1\|AUL83397.1\|643650_644345_+\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|281403
CP024056.1\|AUL83385.1\|631333_632665_+\|threonine/serine-transporter-TdcC	unknown	unknown	gnl\|CDD\|184191
CP024056.1\|AUL83390.1\|636700_638065_+\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|185000
CP024056.1\|AUL83389.1\|636239_636629_+\|reactive-intermediate/imine-deaminase	unknown	unknown	gnl\|CDD\|105214
CP024056.1\|AUL83398.1\|644530_644896_-\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|225694
CP024056.1\|AUL83393.1\|641218_641383_-\|hypothetical-protein	unknown	unknown	unknown
CP024056.1\|AUL83395.1\|642211_643108_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176122
CP024056.1\|AUL83384.1\|630322_631312_+\|serine/threonine-dehydratase	unknown	unknown	gnl\|CDD\|236317
CP024056.1\|AUL83401.1\|646822_647122_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372871
CP024056.1\|AUL83396.1\|643158_643515_-\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|225694
CP024056.1\|AUL83399.1\|645188_646175_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223512
CP024056.1\|AUL83387.1\|633932_634118_+\|formate-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
CP024056.1\|AUL83386.1\|632690_633899_+\|propionate-kinase	unknown	unknown	gnl\|CDD\|183484
CP024056.1\|AUL83400.1\|646244_646727_-\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
CP024056.1\|AUL83394.1\|641405_642107_-\|pirin-like-protein-YhaK	unknown	unknown	gnl\|CDD\|224655
CP024056.1\|AUL83402.1\|647111_647516_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227681

Protein	Function_ID	Function_description	E-value
CP024056.1\|AUL83391.1\|638337_639669_+\|transporter	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	2.53913e-167
CP024056.1\|AUL83388.1\|634117_636226_+\|formate-C-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
CP024056.1\|AUL83383.1\|629285_630224_+\|transcriptional-regulator-TdcA	gnl\|CDD\|182391	PRK10341, PRK10341, transcriptional regulator TdcA.	0
CP024056.1\|AUL83392.1\|639696_641007_+\|serine-dehydratase-subunit-alpha-family-protein	gnl\|CDD\|226206	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism].	0
CP024056.1\|AUL83397.1\|643650_644345_+\|IS1-family-transposase	gnl\|CDD\|281403	pfam03400, DDE_Tnp_IS1, IS1 transposase. Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases.	7.88437e-84
CP024056.1\|AUL83385.1\|631333_632665_+\|threonine/serine-transporter-TdcC	gnl\|CDD\|184191	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional.	0
CP024056.1\|AUL83390.1\|636700_638065_+\|L-serine-ammonia-lyase	gnl\|CDD\|185000	PRK15040, PRK15040, L-serine ammonia-lyase.	0
CP024056.1\|AUL83389.1\|636239_636629_+\|reactive-intermediate/imine-deaminase	gnl\|CDD\|105214	PRK11401, PRK11401, enamine/imine deaminase.	2.43767e-83
CP024056.1\|AUL83398.1\|644530_644896_-\|DUF805-domain-containing-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	3.68376e-42
CP024056.1\|AUL83394.1\|641405_642107_-\|pirin-like-protein-YhaK	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	6.08497e-67
CP024056.1\|AUL83395.1\|642211_643108_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176122	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold. HupR, a member of the LysR family, activates hupA transcription under low-iron conditions in the presence of hemin. The expression of many iron-uptake genes, such as hupA, is regulated at the transcriptional level by iron and an iron-binding repressor protein called Fur (ferric uptake regulation). Under iron-abundant conditions with heme, the active Fur repressor protein represses transcription of the iron-uptake gene hupA, and prevents transcriptional activation via HupR. Under low-iron conditions with heme, the Fur repressor is inactive and transcription of the hupA is allowed. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.2986e-51
CP024056.1\|AUL83384.1\|630322_631312_+\|serine/threonine-dehydratase	gnl\|CDD\|236317	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB.	0
CP024056.1\|AUL83401.1\|646822_647122_-\|hypothetical-protein	gnl\|CDD\|372871	pfam13997, YqjK, YqjK-like protein. The YqjK-like protein family includes the E. coli YqjK protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length. There is a single completely conserved residue R that may be functionally important.	6.11451e-20
CP024056.1\|AUL83396.1\|643158_643515_-\|DUF805-domain-containing-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	1.17161e-38
CP024056.1\|AUL83399.1\|645188_646175_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	0
CP024056.1\|AUL83387.1\|633932_634118_+\|formate-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	1.28474e-24
CP024056.1\|AUL83386.1\|632690_633899_+\|propionate-kinase	gnl\|CDD\|183484	PRK12379, PRK12379, propionate kinase.	0
CP024056.1\|AUL83400.1\|646244_646727_-\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	5.63883e-30
CP024056.1\|AUL83402.1\|647111_647516_-\|hypothetical-protein	gnl\|CDD\|227681	COG5393, COG5393, Predicted membrane protein [Function unknown].	2.73939e-60

>CP024056.1|AUL83392.1|639696_641007_+|serine-dehydratase-subunit-alpha-family-protein
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNGVVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR
>CP024056.1|AUL83391.1|638337_639669_+|transporter
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS
>CP024056.1|AUL83390.1|636700_638065_+|L-serine-ammonia-lyase
MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGTHIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
>CP024056.1|AUL83389.1|636239_636629_+|reactive-intermediate/imine-deaminase
MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA
>CP024056.1|AUL83388.1|634117_636226_+|formate-C-acetyltransferase
MEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIVGLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEIGEDLEATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFKAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDGEYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKEDPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREMLLDAIEHPEKYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAL
>CP024056.1|AUL83387.1|633932_634118_+|formate-acetyltransferase
MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGDESFLAEATPATTELWEK
>CP024056.1|AUL83386.1|632690_633899_+|propionate-kinase
MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAFLSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITDEVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLPWKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLIRRLVMEHLAVLGVEIDTEMNNRSNSCGERIVSSENARVICAVIPTNEEKMIALDAIHLGKVNAPAEFA
>CP024056.1|AUL83385.1|631333_632665_+|threonine/serine-transporter-TdcC
MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSKPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLILKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF
>CP024056.1|AUL83384.1|630322_631312_+|serine/threonine-dehydratase
MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA
>CP024056.1|AUL83383.1|629285_630224_+|transcriptional-regulator-TdcA
MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKTASVLVELAKEYSSYNGCRRRQLIEVG
>CP024056.1|AUL83393.1|641218_641383_-|hypothetical-protein
MSKKSAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAETRLAEDEATA
>CP024056.1|AUL83394.1|641405_642107_-|pirin-like-protein-YhaK
MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSDHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVWLHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV
>CP024056.1|AUL83395.1|642211_643108_+|LysR-family-transcriptional-regulator
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFSGK
>CP024056.1|AUL83396.1|643158_643515_-|DUF805-domain-containing-protein
MQWYLSVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLILGLELPYLSMLYLLATFLPVLALAIRRLHDTDRSGAWALLFFVPFIGWLVLLVFFCTEGTSGSNRYGNDPKFGSN
>CP024056.1|AUL83397.1|643650_644345_+|IS1-family-transposase
MASVNIHCPRCQSAQVYRHGQNPKGRDRFRCRDCHRVFQLTYTYQARKPGMKELITEMAFNGAGVRDTARTLKIGINTVIRTFKKLAPKRITSSPVAHADVALICELDEQWSYVGSKARQHWLWYAYNTKTGGVLAYTFGPRTDQTCRELLALLTPFNIGMLTSDDWGSYGREVPKNKHLTGKIFTQRIERNNLTLRTRIKRLARKTICFSRSVEIHEKVIGAFIEKHMFY
>CP024056.1|AUL83398.1|644530_644896_-|DUF805-domain-containing-protein
MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEP
>CP024056.1|AUL83399.1|645188_646175_-|glutathione-S-transferase-family-protein
MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQHEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG
>CP024056.1|AUL83400.1|646244_646727_-|DoxX-family-protein
MIHSIDSNDANTAPLHKKTISSLSGAVESMMKKLEDVGVLVARILMPILFITAGWGKITAYSGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW
>CP024056.1|AUL83401.1|646822_647122_-|hypothetical-protein
MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWNMLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG
>CP024056.1|AUL83402.1|647111_647516_-|hypothetical-protein
MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEKANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIWTLRKSRKSTLLRHTRHELANDRQLLEEESREQ

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Crispr_ID: CP024056_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024056_2

984095-984183

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024056_2

>merge|CP024056|2|984095-984183|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCGCCAATCGAGCAGACTTTTCCCGTCTATGCGTTGTGTTCCCCGCGCCAGCGGGGATAAACC

>CP024056|2|2|984095-984183|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCAATCGAGCAGACTTTTCCCGTCTATGCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACC

Protein	Signature genes	Signature genes Name	Protein_function
CP024056.1\|AUL83686.1\|970699_973456_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
CP024056.1\|AUL83693.1\|980571_981870_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
CP024056.1\|AUL83688.1\|974861_977096_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
CP024056.1\|AUL83701.1\|991100_992438_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
CP024056.1\|AUL83694.1\|982804_982945_-\|hypothetical-protein	unknown	unknown	unknown
CP024056.1\|AUL83697.1\|985597_987076_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
CP024056.1\|AUL83705.1\|994791_995052_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
CP024056.1\|AUL83700.1\|989552_991007_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
CP024056.1\|AUL83696.1\|984736_985431_-\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|281403
CP024056.1\|AUL83702.1\|992415_993195_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
CP024056.1\|AUL83690.1\|977421_977757_+\|mRNA-interferase-MazF	unknown	unknown	gnl\|CDD\|182138
CP024056.1\|AUL83698.1\|987102_988380_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
CP024056.1\|AUL83695.1\|983083_983755_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP024056.1\|AUL83699.1\|988697_989483_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|187605
CP024056.1\|AUL83692.1\|978846_980484_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP024056.1\|AUL83687.1\|973512_974814_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
CP024056.1\|AUL83691.1\|977827_978619_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP024056.1\|AUL83704.1\|994199_994775_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
CP024056.1\|AUL83689.1\|977173_977422_+\|antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
CP024056.1\|AUL83703.1\|993191_994052_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936

Protein	Function_ID	Function_description	E-value
CP024056.1\|AUL83689.1\|977173_977422_+\|antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	1.67446e-47
CP024056.1\|AUL83693.1\|980571_981870_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP024056.1\|AUL83688.1\|974861_977096_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP024056.1\|AUL83686.1\|970699_973456_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
CP024056.1\|AUL83697.1\|985597_987076_-\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.97427e-109
CP024056.1\|AUL83700.1\|989552_991007_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	8.373e-83
CP024056.1\|AUL83696.1\|984736_985431_-\|IS1-family-transposase	gnl\|CDD\|281403	pfam03400, DDE_Tnp_IS1, IS1 transposase. Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases.	7.88437e-84
CP024056.1\|AUL83704.1\|994199_994775_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
CP024056.1\|AUL83690.1\|977421_977757_+\|mRNA-interferase-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
CP024056.1\|AUL83698.1\|987102_988380_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	2.41032e-29
CP024056.1\|AUL83695.1\|983083_983755_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.23739e-155
CP024056.1\|AUL83699.1\|988697_989483_+\|oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.14286e-138
CP024056.1\|AUL83692.1\|978846_980484_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP024056.1\|AUL83687.1\|973512_974814_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
CP024056.1\|AUL83691.1\|977827_978619_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	2.17301e-159
CP024056.1\|AUL83705.1\|994791_995052_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	8.55479e-42
CP024056.1\|AUL83701.1\|991100_992438_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.74708e-50
CP024056.1\|AUL83702.1\|992415_993195_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.5507e-62
CP024056.1\|AUL83703.1\|993191_994052_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.34125e-89

>CP024056.1|AUL83695.1|983083_983755_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVISRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>CP024056.1|AUL83694.1|982804_982945_-|hypothetical-protein
MLEENKENVFNHVKIPTKLYLFFSVLVFNDNKSKITDAAVNLFIQI
>CP024056.1|AUL83693.1|980571_981870_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIALALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP024056.1|AUL83692.1|978846_980484_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>CP024056.1|AUL83691.1|977827_978619_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQIAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>CP024056.1|AUL83690.1|977421_977757_+|mRNA-interferase-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>CP024056.1|AUL83689.1|977173_977422_+|antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAALVNDITPENLHENIDWGEPKDKEVW
>CP024056.1|AUL83688.1|974861_977096_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>CP024056.1|AUL83687.1|973512_974814_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACLGSLQAIRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>CP024056.1|AUL83686.1|970699_973456_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGANIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTLTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGVLLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVLNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG
>CP024056.1|AUL83696.1|984736_985431_-|IS1-family-transposase
MASVNIHCPRCQSAQVYRHGQNPKGRDRFRCRDCHRVFQLTYTYQARKPGMKELITEMAFNGAGVRDTARTLKIGINTVIRTFKKLAPKRITSSPVAHADVALICELDEQWSYVGSKARQHWLWYAYNTKTGGVLAYTFGPRTDQTCRELLALLTPFNIGMLTSDDWGSYGREVPKNKHLTGKIFTQRIERNNLTLRTRIKRLARKTICFSRSVEIHEKVIGAFIEKHMFY
>CP024056.1|AUL83697.1|985597_987076_-|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASSVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>CP024056.1|AUL83698.1|987102_988380_-|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>CP024056.1|AUL83699.1|988697_989483_+|oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSVKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>CP024056.1|AUL83700.1|989552_991007_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMTEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>CP024056.1|AUL83701.1|991100_992438_+|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>CP024056.1|AUL83702.1|992415_993195_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTIAEKAQKLWQDYLRQRMQP
>CP024056.1|AUL83703.1|993191_994052_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPICLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>CP024056.1|AUL83704.1|994199_994775_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>CP024056.1|AUL83705.1|994791_995052_-|ferredoxin-family-protein
MSVAHNLWRVADAPHIVPADSVERQMVQRLINACPAGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG

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Crispr_ID: CP024056_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024056_3

1011636-1011789

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCGTCC	PILER-CR

2 spacers

cas2,cas6e,cas7,cas8e,cas3

The CRISPR arrays of CP024056_3

>merge|CP024056|3|1011636-1011789|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGTCCGTTTGGTCCACCAAATGTTTGATGCTTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCAGGGTGTGATTCCGCATACCAAGCAGTAAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGC

>CP024056|3|1|1011636-1011789|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGTCC	GTTTGGTCCACCAAATGTTTGATGCTTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCGTTC	AGGGTGTGATTCCGCATACCAAGCAGTAA
GAGTTCCCCGCGCCAGCGGGGATAAACCGGGC

Protein	Signature genes	Signature genes Name	Protein_function
CP024056.1\|AUL83725.1\|1017705_1018185_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP024056.1\|AUL83721.1\|1015493_1016099_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP024056.1\|AUL83727.1\|1019211_1019973_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP024056.1\|AUL83720.1\|1014066_1015494_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
CP024056.1\|AUL83726.1\|1018181_1019231_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP024056.1\|AUL83722.1\|1016148_1016472_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371891
CP024056.1\|AUL83716.1\|1009679_1010330_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP024056.1\|AUL83711.1\|1001657_1001810_+\|Hok/Gef-family-protein	unknown	unknown	gnl\|CDD\|366840
CP024056.1\|AUL83713.1\|1004830_1006044_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
CP024056.1\|AUL83712.1\|1002002_1004702_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP024056.1\|AUL83710.1\|1000658_1001393_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP024056.1\|AUL83717.1\|1011245_1011539_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP024056.1\|AUL83709.1\|998871_1000584_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP024056.1\|AUL83715.1\|1007668_1008940_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
CP024056.1\|AUL83714.1\|1006112_1007672_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP024056.1\|AUL83718.1\|1011867_1012905_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP024056.1\|AUL83708.1\|997072_998872_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP024056.1\|AUL83724.1\|1016995_1017706_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP024056.1\|AUL83723.1\|1016665_1016977_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP024056.1\|AUL83719.1\|1013156_1014065_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375

Protein	Function_ID	Function_description	E-value
CP024056.1\|AUL83725.1\|1017705_1018185_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
CP024056.1\|AUL83721.1\|1015493_1016099_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
CP024056.1\|AUL83727.1\|1019211_1019973_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
CP024056.1\|AUL83720.1\|1014066_1015494_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP024056.1\|AUL83726.1\|1018181_1019231_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP024056.1\|AUL83722.1\|1016148_1016472_+\|hypothetical-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
CP024056.1\|AUL83716.1\|1009679_1010330_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	5.19362e-90
CP024056.1\|AUL83711.1\|1001657_1001810_+\|Hok/Gef-family-protein	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
CP024056.1\|AUL83713.1\|1004830_1006044_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.41145e-156
CP024056.1\|AUL83712.1\|1002002_1004702_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.03627e-177
CP024056.1\|AUL83710.1\|1000658_1001393_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.39575e-137
CP024056.1\|AUL83717.1\|1011245_1011539_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.35543e-65
CP024056.1\|AUL83709.1\|998871_1000584_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP024056.1\|AUL83715.1\|1007668_1008940_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	6.42679e-129
CP024056.1\|AUL83714.1\|1006112_1007672_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	7.29179e-164
CP024056.1\|AUL83718.1\|1011867_1012905_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP024056.1\|AUL83708.1\|997072_998872_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP024056.1\|AUL83724.1\|1016995_1017706_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	5.68505e-122
CP024056.1\|AUL83723.1\|1016665_1016977_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
CP024056.1\|AUL83719.1\|1013156_1014065_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0

>CP024056.1|AUL83717.1|1011245_1011539_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>CP024056.1|AUL83716.1|1009679_1010330_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRQEELQGAFRFFVLSQERPAESETFTIECRPFVSELRTGQSLCFNLRANPTICKAGKRHDLLMEAKRQVKGQAEGRDIWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTAPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>CP024056.1|AUL83715.1|1007668_1008940_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSIVKDEHKVALRKWHEELQDKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVKTVILGGATRLRVSSQSLKRAWRTSELFEQALAGHIGVRSGRIAREAATILIEKGIEDKKAIEWAVEIADYLGKAKKDKKQKNDKKPKDPLTSAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEKDLALLRKDRMAVDIAMFGRMLAKKPGFNVEAACQVAHAFGVSETIVENDFFTAVDDLRQASEDAGAGHVDETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLEVAVQRITTLRENMNTVYEQKTDYASFDVMNKQGSMKDVLDFICA
>CP024056.1|AUL83714.1|1006112_1007672_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDISAPRADLQGAVWQFLLGLLQTSFAPKDHRRWDDIWEDGLEAEKLREALQSLEHAFQFGPDSPSFMQDFDELKVKATSIASLLPDAPGKQTKERNTDHFIKRDTTQHLCLHCVPLALFSIQLNAPIGGRGYYPGLRGGGPLTTLIELLEYQGNQQTPLWRKLWLNVMPQDEADLPLPKTFDDLVFPWLAPTRTSELDGAVVTDEQVNKLQAYWGMPRRIRIDFKTTSIGNCDICGRQSDALLGLMSLKNYGVQYVMWRHPLTPRLPLKEGGDFYSVKPQPGGLIWRDWLGLIEVGNSKNNTELPAQVVKLLNASNLKQTRVGLWGFGFDFEDMKVRCWYEHHFPLLLNKKEDLIPKLRLAAQAASHILSLLHRALKEAWFSEKKTTKLDFGFVDIDFWNKTQHRFLRLVRKIEEGQDPDELLSKWQKEMWLFARQDFDDRVFTNPYEPVDLERVMTARKKYFTTSAEKQNANAAREKKQEAAE
>CP024056.1|AUL83713.1|1004830_1006044_+|IS3-family-transposase
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGSGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKKLMPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDDWLKKEIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTVSRKAVAACDRVNRQFVAERPDQLWVADFTWVSTWQGFVYVAFIIDVFAGYIVGWQVSSSMETTFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRTEVELATLTWVDWYNNRRLLERLGHIPPAEAEKAYYASIGNNDLAA
>CP024056.1|AUL83712.1|1002002_1004702_+|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWEKTRRGEKEGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPEDKAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAHPMDIKGYWQKTLVQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQQGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGTEGQQEAPFLEKDYYPWLTHVTKSDVNSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCTQVIEQSVDIDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEGVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLAICIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRLWCIEQRQDPEMANVILVNDDESCGYSATEGLIGKVG
>CP024056.1|AUL83711.1|1001657_1001810_+|Hok/Gef-family-protein
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>CP024056.1|AUL83710.1|1000658_1001393_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP024056.1|AUL83709.1|998871_1000584_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>CP024056.1|AUL83708.1|997072_998872_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLTELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY
>CP024056.1|AUL83718.1|1011867_1012905_-|aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALVIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>CP024056.1|AUL83719.1|1013156_1014065_+|sulfate-adenylyltransferase-subunit-2
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFIHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>CP024056.1|AUL83720.1|1014066_1015494_+|sulfate-adenylyltransferase
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>CP024056.1|AUL83721.1|1015493_1016099_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>CP024056.1|AUL83722.1|1016148_1016472_+|hypothetical-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>CP024056.1|AUL83723.1|1016665_1016977_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>CP024056.1|AUL83724.1|1016995_1017706_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAVPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>CP024056.1|AUL83725.1|1017705_1018185_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>CP024056.1|AUL83726.1|1018181_1019231_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQTLLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>CP024056.1|AUL83727.1|1019211_1019973_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: CP024056_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024056_4

2362274-2362397

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024056_4

>merge|CP024056|4|2362274-2362397|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>CP024056|4|3|2362274-2362397|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
CP024056.1\|AUL84992.1\|2357114_2357762_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182160
CP024056.1\|AUL85001.1\|2366272_2367421_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
CP024056.1\|AUL85004.1\|2369965_2370991_-\|PurR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236739
CP024056.1\|AUL85000.1\|2365591_2366233_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
CP024056.1\|AUL84990.1\|2353698_2353908_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
CP024056.1\|AUL84997.1\|2361833_2362139_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
CP024056.1\|AUL84993.1\|2357825_2358494_+\|thiosulfate-reductase-electron-transport-protein-PhsB	unknown	unknown	gnl\|CDD\|274451
CP024056.1\|AUL84989.1\|2351729_2353142_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|181699
CP024056.1\|AUL85005.1\|2370978_2371203_-\|hypothetical-protein	unknown	unknown	unknown
CP024056.1\|AUL84995.1\|2359279_2360092_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
CP024056.1\|AUL84999.1\|2364003_2365377_-\|multidrug-resistance-protein-MdtK	unknown	unknown	gnl\|CDD\|234981
CP024056.1\|AUL84991.1\|2354363_2354990_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182135
CP024056.1\|AUL85006.1\|2371289_2371379_+\|YnhF-family-membrane-protein	unknown	unknown	unknown
CP024056.1\|AUL85002.1\|2367712_2368924_-\|Bcr/CflA-family-multidrug-efflux-transporter	unknown	unknown	gnl\|CDD\|182924
CP024056.1\|AUL85007.1\|2371544_2372714_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
CP024056.1\|AUL85003.1\|2369036_2369969_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
CP024056.1\|AUL84998.1\|2362706_2363963_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|137602
CP024056.1\|AUL84988.1\|2351182_2351419_-\|murein-lipoprotein	unknown	unknown	gnl\|CDD\|185294
CP024056.1\|AUL84994.1\|2358490_2359276_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
CP024056.1\|AUL84996.1\|2360103_2361708_-\|FAD/NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|182134

Protein	Function_ID	Function_description	E-value
CP024056.1\|AUL84992.1\|2357114_2357762_+\|hypothetical-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	2.81741e-122
CP024056.1\|AUL85001.1\|2366272_2367421_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
CP024056.1\|AUL85004.1\|2369965_2370991_-\|PurR-family-transcriptional-regulator	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
CP024056.1\|AUL85000.1\|2365591_2366233_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	6.13739e-122
CP024056.1\|AUL84990.1\|2353698_2353908_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	1.77847e-33
CP024056.1\|AUL84997.1\|2361833_2362139_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	1.12003e-64
CP024056.1\|AUL84993.1\|2357825_2358494_+\|thiosulfate-reductase-electron-transport-protein-PhsB	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	7.32003e-76
CP024056.1\|AUL84989.1\|2351729_2353142_-\|pyruvate-kinase	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
CP024056.1\|AUL84995.1\|2359279_2360092_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	9.78241e-175
CP024056.1\|AUL84999.1\|2364003_2365377_-\|multidrug-resistance-protein-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
CP024056.1\|AUL84991.1\|2354363_2354990_+\|hypothetical-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
CP024056.1\|AUL85002.1\|2367712_2368924_-\|Bcr/CflA-family-multidrug-efflux-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
CP024056.1\|AUL85007.1\|2371544_2372714_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	9.73937e-98
CP024056.1\|AUL85003.1\|2369036_2369969_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
CP024056.1\|AUL84998.1\|2362706_2363963_+\|hypothetical-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
CP024056.1\|AUL84988.1\|2351182_2351419_-\|murein-lipoprotein	gnl\|CDD\|185294	PRK15396, PRK15396, major outer membrane lipoprotein.	2.83509e-37
CP024056.1\|AUL84994.1\|2358490_2359276_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	1.12594e-162
CP024056.1\|AUL84996.1\|2360103_2361708_-\|FAD/NAD(P)-binding-domain-containing-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0

>CP024056.1|AUL84997.1|2361833_2362139_-|monooxygenase
MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>CP024056.1|AUL84996.1|2360103_2361708_-|FAD/NAD(P)-binding-domain-containing-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPINCTYLEWLQKQEANHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLQLVDQARKQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSKTFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYEMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>CP024056.1|AUL84995.1|2359279_2360092_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLAQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>CP024056.1|AUL84994.1|2358490_2359276_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFAIVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPSVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>CP024056.1|AUL84993.1|2357825_2358494_+|thiosulfate-reductase-electron-transport-protein-PhsB
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>CP024056.1|AUL84992.1|2357114_2357762_+|hypothetical-protein
MGEMNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>CP024056.1|AUL84991.1|2354363_2354990_+|hypothetical-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>CP024056.1|AUL84990.1|2353698_2353908_+|fumarate-hydratase-FumD
MGNRIKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>CP024056.1|AUL84989.1|2351729_2353142_-|pyruvate-kinase
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>CP024056.1|AUL84988.1|2351182_2351419_-|murein-lipoprotein
MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK
>CP024056.1|AUL84998.1|2362706_2363963_+|hypothetical-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFCVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSEVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDSVTFSVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>CP024056.1|AUL84999.1|2364003_2365377_-|multidrug-resistance-protein-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVIILQRASR
>CP024056.1|AUL85000.1|2365591_2366233_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTHAVVDTVERVLAARENAMNQPGTEA
>CP024056.1|AUL85001.1|2366272_2367421_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>CP024056.1|AUL85002.1|2367712_2368924_-|Bcr/CflA-family-multidrug-efflux-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQVIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>CP024056.1|AUL85003.1|2369036_2369969_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>CP024056.1|AUL85004.1|2369965_2370991_-|PurR-family-transcriptional-regulator
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>CP024056.1|AUL85005.1|2370978_2371203_-|hypothetical-protein
MISVFTTSPFRQDRPKFHAYTICVLAIDPFLTLRVVFPAYRNTFVVRKVCKGKRLPCDFAGAEVRVWSEMEWQQ
>CP024056.1|AUL85006.1|2371289_2371379_+|YnhF-family-membrane-protein
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>CP024056.1|AUL85007.1|2371544_2372714_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRISTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGTIVAGLALLLVFMSARKQPETVCVANS

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Crispr_ID: CP024056_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024056_6

3638461-3638605

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024056_6

>merge|CP024056|6|3638461-3638605|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGTAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTACCGGATGC

>CP024056|6|5|3638461-3638605|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	TGCGTAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTACCGGATGC

Protein	Signature genes	Signature genes Name	Protein_function
CP024056.1\|AUL86215.1\|3644149_3644844_-\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|281403
CP024056.1\|AUL86218.1\|3646732_3647551_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|182523
CP024056.1\|AUL86209.1\|3635310_3635622_+\|hypothetical-protein	unknown	unknown	unknown
CP024056.1\|AUL86210.1\|3635906_3636977_+\|integrase	unknown	unknown	gnl\|CDD\|271181
CP024056.1\|AUL86220.1\|3648612_3649302_-\|molybdenum-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181841
CP024056.1\|AUL86211.1\|3637111_3638395_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|236709
CP024056.1\|AUL86202.1\|3630257_3630815_+\|phage-N-6-adenine-methyltransferase	unknown	unknown	gnl\|CDD\|368643
CP024056.1\|AUL86212.1\|3640704_3640887_-\|aconitase	unknown	unknown	gnl\|CDD\|183125
CP024056.1\|AUL86221.1\|3649301_3650075_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
CP024056.1\|AUL86207.1\|3633648_3634257_+\|eae-like-domain-protein	unknown	unknown	gnl\|CDD\|379401
CP024056.1\|AUL86217.1\|3645582_3646578_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
CP024056.1\|AUL86204.1\|3631205_3631463_+\|conjugal-transfer-protein-TraR	unknown	unknown	gnl\|CDD\|222775
CP024056.1\|AUL86219.1\|3647551_3648610_-\|molybdenum-import-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
CP024056.1\|AUL86213.1\|3641069_3642503_-\|anion-permease	unknown	unknown	gnl\|CDD\|279307
CP024056.1\|AUL86203.1\|3630825_3631107_+\|cell-division-protein-ZapA	unknown	unknown	unknown
CP024056.1\|AUL86206.1\|3633136_3633505_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225511
CP024056.1\|AUL86216.1\|3644915_3645542_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131
CP024056.1\|AUL86214.1\|3642578_3643631_-\|4-oxalomesaconate-tautomerase	unknown	unknown	gnl\|CDD\|380230
CP024056.1\|AUL86208.1\|3634387_3635086_+\|DUF1311-domain-containing-protein	unknown	unknown	gnl\|CDD\|164889
CP024056.1\|AUL86205.1\|3631468_3632682_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853

Protein	Function_ID	Function_description	E-value
CP024056.1\|AUL86215.1\|3644149_3644844_-\|IS1-family-transposase	gnl\|CDD\|281403	pfam03400, DDE_Tnp_IS1, IS1 transposase. Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases.	7.88437e-84
CP024056.1\|AUL86218.1\|3646732_3647551_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
CP024056.1\|AUL86220.1\|3648612_3649302_-\|molybdenum-ABC-transporter-permease	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	2.41762e-146
CP024056.1\|AUL86210.1\|3635906_3636977_+\|integrase	gnl\|CDD\|271181	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase. Lambda-type integrases catalyze site-specific integration and excision of temperate bacteriophages and other mobile genetic elements to and from the bacterial host chromosome. They are tyrosine-based site-specific recombinase and belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The phage lambda integrase can bridge two different and well-separated DNA sequences called arm- and core-sites. The C-terminal domain binds, cleaves and re-ligates DNA strands at the core-sites, while the N-terminal domain is largely responsible for high-affinity binding to the arm-type sites.	1.09199e-61
CP024056.1\|AUL86211.1\|3637111_3638395_+\|acyl-CoA-thioesterase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
CP024056.1\|AUL86202.1\|3630257_3630815_+\|phage-N-6-adenine-methyltransferase	gnl\|CDD\|368643	pfam05869, Dam, DNA N-6-adenine-methyltransferase (Dam). This family consists of several bacterial and phage DNA N-6-adenine-methyltransferase (Dam) like sequences.	2.65741e-67
CP024056.1\|AUL86213.1\|3641069_3642503_-\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
CP024056.1\|AUL86221.1\|3649301_3650075_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0
CP024056.1\|AUL86207.1\|3633648_3634257_+\|eae-like-domain-protein	gnl\|CDD\|379401	pfam13935, Ead_Ea22, Ead/Ea22-like protein. This family contains phage proteins and bacterial proteins that are likely to represent integrated phage proteins. This family includes the Lambda phage Ea22 early protein as well as the Bacteriophage P22 Ead protein.	4.81937e-06
CP024056.1\|AUL86217.1\|3645582_3646578_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
CP024056.1\|AUL86204.1\|3631205_3631463_+\|conjugal-transfer-protein-TraR	gnl\|CDD\|222775	PHA00080, PHA00080, DksA-like zinc finger domain containing protein.	1.0861e-25
CP024056.1\|AUL86219.1\|3647551_3648610_-\|molybdenum-import-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
CP024056.1\|AUL86212.1\|3640704_3640887_-\|aconitase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	3.04846e-08
CP024056.1\|AUL86206.1\|3633136_3633505_-\|hypothetical-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.64884e-18
CP024056.1\|AUL86216.1\|3644915_3645542_+\|transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.00661e-76
CP024056.1\|AUL86214.1\|3642578_3643631_-\|4-oxalomesaconate-tautomerase	gnl\|CDD\|380230	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase.	0
CP024056.1\|AUL86208.1\|3634387_3635086_+\|DUF1311-domain-containing-protein	gnl\|CDD\|164889	PHA02067, PHA02067, hypothetical protein.	9.8452e-17
CP024056.1\|AUL86205.1\|3631468_3632682_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.37763e-155

>CP024056.1|AUL86211.1|3637111_3638395_+|acyl-CoA-thioesterase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSRRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDHDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>CP024056.1|AUL86210.1|3635906_3636977_+|integrase
MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNPVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHVDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK
>CP024056.1|AUL86209.1|3635310_3635622_+|hypothetical-protein
MEMIMACSTFNPLTLQKYQPDPEDLCSLCGGNHGKAAMIECKDKIHICLNCVDVLVDIKNEREDKKRSEAVRALDSWMRDGYSAAQIYDLAISKGEIPGVRIE
>CP024056.1|AUL86208.1|3634387_3635086_+|DUF1311-domain-containing-protein
MKNILLASLLVASPGAFAASFDCQKASTAIEHKICDNERLSKLDEQLSSAYSSALKGNPENADTLKMVQRQWVNMRGKLTDNKALELAYLIQINGLKGLGSSVSVTAANDIPTSAQKHSEEQEETSKAEAKSVKNGNELTLESFRAKYVEVDGEYYSTTSIPRGSSFLFTCASRIADDQVNIWKKQAAKEGKIDLFFEVENHLHTAMLNANFQKLNSDPAKRGICNLINAVP
>CP024056.1|AUL86207.1|3633648_3634257_+|eae-like-domain-protein
MSNIDTLALREAAEQAMHDDWGFDADLFHELVTPSIVLALLDEREAANKRITELEASRAALAAENAGLKAFKTAVYQQMGVGCDAPEFSITTGLSNLRRFADTLHAIEREFFTKELPDEEHEGETFNECPLSWGMSVEQYVSEFRKCLAEVRAQGVEMYADNLDNGADDAERGGFDDAVKFLRSEASGVRLFADQLRKGGNQ
>CP024056.1|AUL86206.1|3633136_3633505_-|hypothetical-protein
MKKRNFSAEFKRESAQLVVDQNYTVADAAKAMDIGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATVDSIGQRNSYVKTWGCGGFLNETNIYSRGKSLCF
>CP024056.1|AUL86205.1|3631468_3632682_+|IS3-family-transposase
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGSGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKKLMPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDDWLKKEIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTVSRKAVAACDRVNRQFVAERPDQLWVADFTWVSTWQGFVYVAFIIDVFAGYIVGWQVSSSMETTFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYTERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRTEVELATLTWVDWYNNRRLLERLGHIPPAEAEKAYYASIGNNDLAA
>CP024056.1|AUL86204.1|3631205_3631463_+|conjugal-transfer-protein-TraR
MADIIDSASEIEELQRNTAIKMRRLNYQTISATHCCECGDPIDERRRLVVQGCRTCASCQEDLELISKQSEPPRKSWRLNSLRKR
>CP024056.1|AUL86203.1|3630825_3631107_+|cell-division-protein-ZapA
MHFSGSGLHILCAYACRHGTCSMTPQQENALRSIARQANSEIKKARQQFPDKNVDDICRSVLKKHRETVTLMGFTPTHLSLAIGMLNGVFKER
>CP024056.1|AUL86202.1|3630257_3630815_+|phage-N-6-adenine-methyltransferase
MTDFTGSNTPAEHRDSWRTPPEIFAALNAEFVFQLDAAASEKNRLCRLFISQEQNTLTTSWPEAMGYASGYVWLNPPYSNISPFVKKAATENKFSSVGCVMLLPADTSVGWFHEAIQTASEVRFITAGRLAFINPLTEKPVSGNNKGSMLIIWHPYPRTHCHFTTVDRGELMAFGSRILARREAA
>CP024056.1|AUL86212.1|3640704_3640887_-|aconitase
MIKLSEKGVFLASNNEIIAEEHFTGEIKKKKPKKALLPGLFSLLIIRPEIWINLKLSLIH
>CP024056.1|AUL86213.1|3641069_3642503_-|anion-permease
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>CP024056.1|AUL86214.1|3642578_3643631_-|4-oxalomesaconate-tautomerase
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCTLEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
>CP024056.1|AUL86215.1|3644149_3644844_-|IS1-family-transposase
MASVNIHCPRCQSAQVYRHGQNPKGRDRFRCRDCHRVFQLTYTYQARKPGMKELITEMAFNGAGVRDTARTLKIGINTVIRTFKKLAPKRITSSPVAHADVALICELDEQWSYVGSKARQHWLWYAYNTKTGGVLAYTFGPRTDQTCRELLALLTPFNIGMLTSDDWGSYGREVPKNKHLTGKIFTQRIERNNLTLRTRIKRLARKTICFSRSVEIHEKVIGAFIEKHMFY
>CP024056.1|AUL86216.1|3644915_3645542_+|transcriptional-regulator
MAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIS
>CP024056.1|AUL86217.1|3645582_3646578_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>CP024056.1|AUL86218.1|3646732_3647551_+|Cof-type-HAD-IIB-family-hydrolase
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEATGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>CP024056.1|AUL86219.1|3647551_3648610_-|molybdenum-import-ATP-binding-protein-ModC
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA
>CP024056.1|AUL86220.1|3648612_3649302_-|molybdenum-ABC-transporter-permease
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>CP024056.1|AUL86221.1|3649301_3650075_-|molybdate-ABC-transporter-substrate-binding-protein
MARKWLNLFAGAALSFTVAGNALADEGKITVFAAASLTNAMQDIATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASEQKDFIIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK

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Crispr_ID: CP024056_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024056_7

4306207-4306322

Orphan

Consensus_repeat	Method
AACGCCTGATGCGACGCTGACGCGTCTTATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024056_7

>merge|CP024056|7|4306207-4306322|CRISPRCasFinder
AACGCCTGATGCGACGCTGACGCGTCTTATCTGGCCTACACGCTGCGATTTTGTAGGCCGGATAAGCAAAGCGCATCCGGCATTCAACGCCTGATGCGACGCTGGCGCGTCTTATC

>CP024056|7|6|4306207-4306322|CRISPRCasFinder
AACGCCTGATGCGACGCTGACGCGTCTTATC	TGGCCTACACGCTGCGATTTTGTAGGCCGGATAAGCAAAGCGCATCCGGCATTC
AACGCCTGATGCGACGCTGGCGCGTCTTATC

Protein	Signature genes	Signature genes Name	Protein_function
CP024056.1\|AUL86783.1\|4295546_4295678_-\|glucose-uptake-inhibitor-SgrT	unknown	unknown	gnl\|CDD\|374203
CP024056.1\|AUL86782.1\|4293613_4294219_+\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
CP024056.1\|AUL86798.1\|4318128_4319118_+\|4-hydroxythreonine-4-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234696
CP024056.1\|AUL86793.1\|4309671_4312578_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP024056.1\|AUL86785.1\|4297585_4298569_+\|thiamine-ABC-transporter-substrate-binding-subunit	unknown	unknown	gnl\|CDD\|236883
CP024056.1\|AUL86791.1\|4306386_4307082_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP024056.1\|AUL86789.1\|4302973_4304674_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP024056.1\|AUL86786.1\|4298544_4300155_+\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	unknown	unknown	gnl\|CDD\|181853
CP024056.1\|AUL86792.1\|4307156_4309508_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP024056.1\|AUL86796.1\|4314435_4316790_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP024056.1\|AUL86787.1\|4300138_4300837_+\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	unknown	unknown	gnl\|CDD\|182716
CP024056.1\|AUL86790.1\|4304684_4306187_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP024056.1\|AUL86788.1\|4300906_4301671_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
CP024056.1\|AUL86794.1\|4312589_4313249_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP024056.1\|AUL86799.1\|4319114_4319936_+\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
CP024056.1\|AUL86800.1\|4319938_4320316_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP024056.1\|AUL86797.1\|4316842_4318129_+\|chaperone-SurA	unknown	unknown	gnl\|CDD\|236758
CP024056.1\|AUL86795.1\|4313365_4314181_-\|molecular-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP024056.1\|AUL86784.1\|4295766_4297422_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|184188
CP024056.1\|AUL87852.1\|4301756_4302635_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717

Protein	Function_ID	Function_description	E-value
CP024056.1\|AUL86783.1\|4295546_4295678_-\|glucose-uptake-inhibitor-SgrT	gnl\|CDD\|374203	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT.	0.00206924
CP024056.1\|AUL86782.1\|4293613_4294219_+\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	5.04233e-143
CP024056.1\|AUL86798.1\|4318128_4319118_+\|4-hydroxythreonine-4-phosphate-dehydrogenase	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP024056.1\|AUL86793.1\|4309671_4312578_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP024056.1\|AUL86785.1\|4297585_4298569_+\|thiamine-ABC-transporter-substrate-binding-subunit	gnl\|CDD\|236883	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional.	0
CP024056.1\|AUL86791.1\|4306386_4307082_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	9.28933e-180
CP024056.1\|AUL86789.1\|4302973_4304674_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP024056.1\|AUL86786.1\|4298544_4300155_+\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	gnl\|CDD\|181853	PRK09433, thiP, thiamine transporter membrane protein; Reviewed.	0
CP024056.1\|AUL86792.1\|4307156_4309508_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP024056.1\|AUL86796.1\|4314435_4316790_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP024056.1\|AUL86787.1\|4300138_4300837_+\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	gnl\|CDD\|182716	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ.	3.50301e-164
CP024056.1\|AUL86790.1\|4304684_4306187_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP024056.1\|AUL86788.1\|4300906_4301671_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	2.87417e-49
CP024056.1\|AUL86794.1\|4312589_4313249_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	1.55263e-158
CP024056.1\|AUL86799.1\|4319114_4319936_+\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.76119e-148
CP024056.1\|AUL86800.1\|4319938_4320316_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	3.63315e-76
CP024056.1\|AUL86797.1\|4316842_4318129_+\|chaperone-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP024056.1\|AUL86795.1\|4313365_4314181_-\|molecular-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	1.09407e-169
CP024056.1\|AUL86784.1\|4295766_4297422_+\|transcriptional-regulator	gnl\|CDD\|184188	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR.	0
CP024056.1\|AUL87852.1\|4301756_4302635_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0

>CP024056.1|AUL86790.1|4304684_4306187_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR
>CP024056.1|AUL86789.1|4302973_4304674_+|ribulokinase
MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGCLPPASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVATL
>CP024056.1|AUL87852.1|4301756_4302635_-|arabinose-operon-transcriptional-regulator-AraC
MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGGVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEKVNDVAVKLS
>CP024056.1|AUL86788.1|4300906_4301671_-|DedA-family-protein
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
>CP024056.1|AUL86787.1|4300138_4300837_+|thiamine-ABC-transporter-ATP-binding-protein-ThiQ
MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQHKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTDELLSGKASASALLGITG
>CP024056.1|AUL86786.1|4298544_4300155_+|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP
MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWVAVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
>CP024056.1|AUL86785.1|4297585_4298569_+|thiamine-ABC-transporter-substrate-binding-subunit
MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKKPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR
>CP024056.1|AUL86784.1|4295766_4297422_+|transcriptional-regulator
MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANKQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP
>CP024056.1|AUL86783.1|4295546_4295678_-|glucose-uptake-inhibitor-SgrT
MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES
>CP024056.1|AUL86782.1|4293613_4294219_+|3-isopropylmalate-dehydratase-small-subunit
MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKTGEKTYRFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN
>CP024056.1|AUL86791.1|4306386_4307082_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ
>CP024056.1|AUL86792.1|4307156_4309508_+|DNA-polymerase-II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPDIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF
>CP024056.1|AUL86793.1|4309671_4312578_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAVQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
>CP024056.1|AUL86794.1|4312589_4313249_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPHLLLHAEMLTITHPAYGNSMTFKAPADF
>CP024056.1|AUL86795.1|4313365_4314181_-|molecular-chaperone-DjlA
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
>CP024056.1|AUL86796.1|4314435_4316790_+|LPS-assembly-protein-LptD
MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQVVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL
>CP024056.1|AUL86797.1|4316842_4318129_+|chaperone-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN
>CP024056.1|AUL86798.1|4318128_4319118_+|4-hydroxythreonine-4-phosphate-dehydrogenase
MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRPYSPNSPAQPQTTGTLTLLPVALRESVTAGQLAIENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ
>CP024056.1|AUL86799.1|4319114_4319936_+|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES
>CP024056.1|AUL86800.1|4319938_4320316_+|Co2+/Mg2+-efflux-protein-ApaG
MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH

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Crispr_ID: CP024056_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024056_8

4329234-4329366

Orphan

Consensus_repeat	Method
ATCACCAATATTGAAAA	PILER-CR

2 spacers

The CRISPR arrays of CP024056_8

>merge|CP024056|8|4329234-4329366|PILER-CR
ATCACCAATATTGAAAATGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGTTCCTCACCAATATTGAAAACATGGCGTAGAAAAAAGAAATTTTCAATATTGCTTTATGGATCACCAATATTGAAAG

>CP024056|8|2|4329234-4329366|PILER-CR
ATCACCAATATTGAAAA	TGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGTTC
CTCACCAATATTGAAAA	CATGGCGTAGAAAAAAGAAATTTTCAATATTGCTTTATGG
ATCACCAATATTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP024056.1\|AUL86818.1\|4337282_4337501_+\|hypothetical-protein	unknown	unknown	unknown
CP024056.1\|AUL86819.1\|4337508_4340730_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
CP024056.1\|AUL86820.1\|4340747_4341896_-\|carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
CP024056.1\|AUL86816.1\|4336176_4336767_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
CP024056.1\|AUL86805.1\|4323767_4324298_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	unknown	unknown	gnl\|CDD\|234852
CP024056.1\|AUL86804.1\|4321912_4323775_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	unknown	unknown	gnl\|CDD\|235131
CP024056.1\|AUL86807.1\|4325795_4326083_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
CP024056.1\|AUL86813.1\|4332432_4333650_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
CP024056.1\|AUL86802.1\|4321242_4321722_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
CP024056.1\|AUL86817.1\|4336852_4337248_-\|CaiF/GrlA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183154
CP024056.1\|AUL86814.1\|4333723_4335277_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
CP024056.1\|AUL86812.1\|4331161_4332304_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
CP024056.1\|AUL86801.1\|4320322_4321165_+\|diadenosine-tetraphosphatase	unknown	unknown	gnl\|CDD\|273208
CP024056.1\|AUL86806.1\|4324405_4325737_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340874
CP024056.1\|AUL86803.1\|4321718_4321856_-\|dihydrofolate-reductase	unknown	unknown	unknown
CP024056.1\|AUL86808.1\|4326079_4327366_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
CP024056.1\|AUL86815.1\|4335385_4336171_+\|crotonobetainyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|179599
CP024056.1\|AUL86809.1\|4327416_4328358_-\|nitrogen-fixation-protein-FixB	unknown	unknown	gnl\|CDD\|235120
CP024056.1\|AUL86810.1\|4328372_4329143_-\|protein-FixA	unknown	unknown	gnl\|CDD\|179569
CP024056.1\|AUL86811.1\|4329616_4331131_+\|L-carnitine/gamma-butyrobetaine-antiporter	unknown	unknown	gnl\|CDD\|179568

Protein	Function_ID	Function_description	E-value
CP024056.1\|AUL86819.1\|4337508_4340730_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
CP024056.1\|AUL86820.1\|4340747_4341896_-\|carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
CP024056.1\|AUL86816.1\|4336176_4336767_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	8.52007e-142
CP024056.1\|AUL86805.1\|4323767_4324298_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	gnl\|CDD\|234852	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF.	1.72958e-131
CP024056.1\|AUL86804.1\|4321912_4323775_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
CP024056.1\|AUL86807.1\|4325795_4326083_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
CP024056.1\|AUL86813.1\|4332432_4333650_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
CP024056.1\|AUL86802.1\|4321242_4321722_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.07206e-127
CP024056.1\|AUL86817.1\|4336852_4337248_-\|CaiF/GrlA-family-transcriptional-regulator	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	2.96175e-74
CP024056.1\|AUL86814.1\|4333723_4335277_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
CP024056.1\|AUL86812.1\|4331161_4332304_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
CP024056.1\|AUL86801.1\|4320322_4321165_+\|diadenosine-tetraphosphatase	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP024056.1\|AUL86806.1\|4324405_4325737_-\|MFS-transporter	gnl\|CDD\|340874	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily. This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.66352e-58
CP024056.1\|AUL86808.1\|4326079_4327366_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
CP024056.1\|AUL86815.1\|4335385_4336171_+\|crotonobetainyl-CoA-hydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	1.44137e-177
CP024056.1\|AUL86809.1\|4327416_4328358_-\|nitrogen-fixation-protein-FixB	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
CP024056.1\|AUL86810.1\|4328372_4329143_-\|protein-FixA	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	2.43681e-170
CP024056.1\|AUL86811.1\|4329616_4331131_+\|L-carnitine/gamma-butyrobetaine-antiporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0

>CP024056.1|AUL86810.1|4328372_4329143_-|protein-FixA
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAVDAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>CP024056.1|AUL86809.1|4327416_4328358_-|nitrogen-fixation-protein-FixB
MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGVQAIQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGIYGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>CP024056.1|AUL86808.1|4326079_4327366_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPSFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>CP024056.1|AUL86807.1|4325795_4326083_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>CP024056.1|AUL86806.1|4324405_4325737_-|MFS-transporter
MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQEIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGSGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG
>CP024056.1|AUL86805.1|4323767_4324298_-|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF
MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICYDETLEGQARHYKQRLLEWQEAHHG
>CP024056.1|AUL86804.1|4321912_4323775_-|glutathione-regulated-potassium-efflux-system-protein-KefC
MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLGLFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAIPLVAMIPLLAASSASTTMGAFAVSALKVAGALVLVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQGSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREADEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTKARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS
>CP024056.1|AUL86803.1|4321718_4321856_-|dihydrofolate-reductase
MRRVQGESVDSPAEYKIFLNIILAPVDDGLRFTYSGDNFFIGKSQ
>CP024056.1|AUL86802.1|4321242_4321722_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
>CP024056.1|AUL86801.1|4320322_4321165_+|diadenosine-tetraphosphatase
MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLGEAAAS
>CP024056.1|AUL86811.1|4329616_4331131_+|L-carnitine/gamma-butyrobetaine-antiporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>CP024056.1|AUL86812.1|4331161_4332304_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYTNQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>CP024056.1|AUL86813.1|4332432_4333650_+|L-carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGKMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLAAHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPRQIWRGMPSHGMDTAAILKNIGYSENDIQELVRKGLAKVED
>CP024056.1|AUL86814.1|4333723_4335277_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLIDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>CP024056.1|AUL86815.1|4335385_4336171_+|crotonobetainyl-CoA-hydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSCGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIFRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>CP024056.1|AUL86816.1|4336176_4336767_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLISDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR
>CP024056.1|AUL86817.1|4336852_4337248_-|CaiF/GrlA-family-transcriptional-regulator
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVAEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>CP024056.1|AUL86818.1|4337282_4337501_+|hypothetical-protein
MTRFEAIKQGHIKIVDISIVCNFTVDKCELNPAYVIKNIDSPKDLLNGQKKRSSSENRITYSIKLADEKYPP
>CP024056.1|AUL86819.1|4337508_4340730_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>CP024056.1|AUL86820.1|4340747_4341896_-|carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP024056_8	8.1\|4329251\|42\|CP024056\|PILER-CR	4329251-4329292	42	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141085-141126	0	1.0
CP024056_8	8.2\|4329310\|40\|CP024056\|PILER-CR	4329310-4329349	40	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141028-141067	0	1.0
CP024056_5	5.1\|3244779\|40\|CP024056\|CRISPRCasFinder	3244779-3244818	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	1	0.975
CP024056_7	7.1\|4306238\|54\|CP024056\|CRISPRCasFinder	4306238-4306291	54	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	165411-165464	1	0.981
CP024056_4	4.1\|2362317\|38\|CP024056\|CRISPRCasFinder	2362317-2362354	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
CP024056_3	3.1\|1011668\|29\|CP024056\|PILER-CR	1011668-1011696	29	JN882286	Cronobacter phage vB_CsaP_GAP52, complete genome	19327-19355	6	0.793
CP024056_3	3.1\|1011668\|29\|CP024056\|PILER-CR	1011668-1011696	29	MK448454	Streptococcus satellite phage Javan361, complete genome	9192-9220	7	0.759
CP024056_7	7.1\|4306238\|54\|CP024056\|CRISPRCasFinder	4306238-4306291	54	NZ_CP048385	Citrobacter freundii strain 62 plasmid p6_C, complete sequence	72431-72484	12	0.778

1. spacer 8.1|4329251|42|CP024056|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 0, identity: 1.0

tgtcacacgcagataaatccaactttcaatattgttaagttc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
******************************************

2. spacer 8.2|4329310|40|CP024056|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 0, identity: 1.0

catggcgtagaaaaaagaaattttcaatattgctttatgg	CRISPR spacer
catggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
****************************************

3. spacer 5.1|3244779|40|CP024056|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcattcttgaaattccccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
************************ ***************

4. spacer 7.1|4306238|54|CP024056|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.981

tggcctacacgctgcgattttgtaggccggataagcaaagcgcatccggcattc	CRISPR spacer
tggcctacacgctgcgattttgtaggccggataagcaaagcgcatccggcattg	Protospacer
*****************************************************

5. spacer 4.1|2362317|38|CP024056|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

6. spacer 3.1|1011668|29|CP024056|PILER-CR matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 6, identity: 0.793

gtttggtc--caccaaatgtttgatgcttca	CRISPR spacer
--ttacccgacaccaaatgtttggtgcttca	Protospacer
  **. .*  *************.*******

7. spacer 3.1|1011668|29|CP024056|PILER-CR matches to MK448454 (Streptococcus satellite phage Javan361, complete genome) position: , mismatch: 7, identity: 0.759

gtttggtccaccaaatgtttgatgcttca	CRISPR spacer
tatcaatccaccaaatttttgattcttca	Protospacer
  *...********** ****** *****

8. spacer 7.1|4306238|54|CP024056|CRISPRCasFinder matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 12, identity: 0.778

tggcctacacgct-----gcgattttgtaggccggataagcaaagcgcatccggcattc	CRISPR spacer
-----tacaaattaattcgcggtattgtaggccggataagcaaagcgcatccggcagta	Protospacer
     **** ..*     ***.* ******************************** *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1121256 : 1175758

Salmonella_phage(68.52%)

head,tRNA,integrase,plate,portal,tail,capsid

attL 1129453:1129497|attR 1164487:1164531

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL83817.1\|1121256_1123029_-	hypothetical protein	A0A1U9AJG3	Stx1_converting_phage	0.0e+00	98.8
AUL83818.1\|1124319_1124919_+	Ail/Lom family protein	A0A0P0ZE39	Stx2-converting_phage	3.1e-108	96.5
AUL83819.1\|1125070_1126384_+\|tail	phage tail protein	H6WZM9	Escherichia_phage	5.9e-75	97.0
AUL83820.1\|1126385_1126655_+\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	4.9e-45	98.9
AUL83821.1\|1126765_1127347_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	2.1e-48	55.3
AUL83822.1\|1127419_1128049_+	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	2.1e-78	92.2
AUL83823.1\|1128130_1128772_+	DUF1076 domain-containing protein	B6DZC0	Enterobacteria_phage	4.8e-107	98.6
AUL83824.1\|1128932_1129181_-	damage-inducible protein DinI	A5LH55	Enterobacteria_phage	5.4e-38	98.8
1129453:1129497	attL	NA	NA	NA	NA
AUL83825.1\|1129613_1130645_-	hypothetical protein	NA	NA	NA	NA
AUL83826.1\|1130647_1131667_-\|integrase	integrase	E5G6L0	Salmonella_phage	6.4e-186	94.0
AUL83827.1\|1131670_1132300_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	2.1e-62	55.5
AUL83828.1\|1132423_1132666_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	6.8e-38	97.5
AUL83829.1\|1132698_1133208_+	hypothetical protein	E5G6L3	Salmonella_phage	7.3e-82	94.1
AUL83830.1\|1133215_1133512_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	4.9e-22	90.4
AUL83831.1\|1133629_1133971_+	hypothetical protein	E5G6L5	Salmonella_phage	6.6e-55	97.3
AUL83832.1\|1134038_1134272_+	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	6.4e-33	98.7
AUL83833.1\|1134271_1134499_+	hypothetical protein	E5G6L7	Salmonella_phage	2.7e-36	100.0
AUL83834.1\|1134495_1134798_+	DUF3850 domain-containing protein	A0A0A8WI22	Clostridium_phage	9.8e-10	42.1
AUL83835.1\|1134794_1135652_+	DNA adenine methylase	E5G6L8	Salmonella_phage	7.8e-161	96.8
AUL83836.1\|1135648_1138063_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.8
AUL83837.1\|1138216_1138405_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
AUL83838.1\|1138343_1138649_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AUL83839.1\|1138970_1140863_+	NTPase KAP	NA	NA	NA	NA
AUL83840.1\|1141346_1141640_+	hypothetical protein	NA	NA	NA	NA
AUL83841.1\|1141685_1142711_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	2.1e-173	88.1
AUL83842.1\|1142710_1144477_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.5
AUL83843.1\|1144619_1145453_+\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	8.2e-123	91.0
AUL83844.1\|1145469_1146528_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.4e-180	93.1
AUL83845.1\|1146531_1147182_+	hypothetical protein	E5G6M7	Salmonella_phage	4.7e-110	94.0
AUL83846.1\|1147277_1147742_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	7.9e-75	88.3
AUL83847.1\|1147741_1147945_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	1.4e-31	92.5
AUL83848.1\|1147948_1148164_+	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
AUL87699.1\|1148183_1148657_+	lysozyme	E5G6N1	Salmonella_phage	3.7e-80	91.0
AUL83849.1\|1148658_1149036_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.1e-15	39.2
AUL83850.1\|1149032_1149461_+	hypothetical protein	E5G6N2	Salmonella_phage	4.2e-46	75.2
AUL83851.1\|1149390_1149594_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	3.0e-23	76.1
AUL83852.1\|1149556_1149988_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	1.3e-71	93.0
AUL83853.1\|1149980_1150427_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.1e-62	84.9
AUL83854.1\|1150495_1151074_+\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	8.8e-92	85.9
AUL83855.1\|1151070_1151430_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	2.8e-51	85.7
AUL83856.1\|1151416_1152325_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	1.3e-142	90.1
AUL83857.1\|1152317_1152923_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.8e-111	93.0
AUL83858.1\|1152919_1154320_+\|tail	phage tail protein	M1TAS6	Escherichia_phage	7.5e-153	78.4
AUL83859.1\|1154346_1154787_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	4.7e-53	69.7
AUL83860.1\|1154758_1155361_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	6.6e-98	89.4
AUL87700.1\|1155360_1155864_-\|tail	phage tail protein	Q9MCR6	Enterobacteria_phage	1.8e-40	54.3
AUL83861.1\|1155936_1156503_+	DNA-invertase	A0A0F7LA37	Escherichia_phage	3.2e-86	86.3
AUL83862.1\|1156645_1157818_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	2.1e-204	90.3
AUL83863.1\|1157827_1158343_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	2.1e-89	95.3
AUL83864.1\|1158397_1158700_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
AUL83865.1\|1158714_1158834_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
AUL83866.1\|1158826_1161988_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	1.8e-308	59.6
AUL83867.1\|1161984_1162470_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	8.3e-67	80.6
AUL83868.1\|1162466_1163567_+	late control protein D	A0A1S6KZZ5	Salmonella_phage	3.4e-177	88.5
AUL83869.1\|1163635_1163854_+	levansucrase regulator	Q53ZE7	Salmonella_virus	7.5e-28	77.8
AUL83870.1\|1163880_1164363_-	hypothetical protein	Q19UP0	Mannheimia_phage	2.7e-17	34.3
AUL83871.1\|1165063_1165546_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
1164487:1164531	attR	NA	NA	NA	NA
AUL83872.1\|1165677_1166154_+	ubiquinone-binding protein	NA	NA	NA	NA
AUL83873.1\|1166143_1166434_+	RnfH family protein	NA	NA	NA	NA
AUL83874.1\|1166495_1166837_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AUL83875.1\|1166985_1168647_-	DNA repair protein RecN	NA	NA	NA	NA
AUL83876.1\|1168732_1169611_-	NAD(+) kinase	NA	NA	NA	NA
AUL87701.1\|1169542_1169737_+	molecular chaperone GrpE	NA	NA	NA	NA
AUL83877.1\|1169733_1170327_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AUL87702.1\|1170381_1171623_-	magnesium/cobalt efflux protein	NA	NA	NA	NA
AUL87703.1\|1171688_1172480_-	inner membrane protein YpjD	NA	NA	NA	NA
AUL83878.1\|1172646_1174008_+	signal recognition particle protein	NA	NA	NA	NA
AUL83879.1\|1174144_1174393_+	30S ribosomal protein S16	NA	NA	NA	NA
AUL83880.1\|1174411_1174960_+	ribosome maturation factor RimM	NA	NA	NA	NA
AUL83881.1\|1174990_1175758_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_2

1387453 : 1578719

205

Escherichia_phage(38.93%)

bacteriocin,lysis,tRNA,integrase,plate,holin,portal,terminase,transposase,tail,capsid

attL 1452744:1452768|attR 1516771:1516795

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL84070.1\|1387453_1388869_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
AUL84071.1\|1388919_1389312_-	hypothetical protein	NA	NA	NA	NA
AUL84072.1\|1389313_1389658_-	hypothetical protein	NA	NA	NA	NA
AUL84073.1\|1390292_1392482_+	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
AUL84074.1\|1392531_1393734_-	nucleoside permease NupC	NA	NA	NA	NA
AUL84075.1\|1394069_1395308_+	divalent metal cation transporter	NA	NA	NA	NA
AUL84076.1\|1395448_1395775_-	DUF2502 domain-containing protein	NA	NA	NA	NA
AUL84077.1\|1395889_1397146_-	ion channel protein	NA	NA	NA	NA
AUL84078.1\|1397349_1398315_+	glucokinase	NA	NA	NA	NA
AUL84079.1\|1398534_1398861_+	fructose-like phosphotransferase enzyme IIB component 1	NA	NA	NA	NA
AUL84080.1\|1398882_1400130_+	PTS fructose transporter subunit IIC	NA	NA	NA	NA
AUL84081.1\|1400144_1401230_+	aminopeptidase	NA	NA	NA	NA
AUL84082.1\|1401229_1402267_+	aminopeptidase	NA	NA	NA	NA
AUL84083.1\|1402291_1404787_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
AUL84084.1\|1405659_1406394_-	DNA-binding response regulator	A0A2R2ZGH8	Clostridioides_phage	3.6e-13	25.4
AUL84085.1\|1406408_1408106_-	sensor histidine kinase	NA	NA	NA	NA
AUL84086.1\|1408482_1409721_+	glutamate--pyruvate aminotransferase AlaC	NA	NA	NA	NA
AUL84087.1\|1410212_1411133_-	lipid A biosynthesis palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	4.9e-76	54.8
AUL84088.1\|1411485_1411728_+	DUF2545 domain-containing protein	NA	NA	NA	NA
AUL84089.1\|1411804_1412080_-	lipoprotein	NA	NA	NA	NA
AUL84090.1\|1412375_1413008_+	hypothetical protein	NA	NA	NA	NA
AUL84091.1\|1413520_1414771_+	formyl-CoA--oxalate CoA-transferase	NA	NA	NA	NA
AUL84092.1\|1414824_1416519_+	oxalyl-CoA decarboxylase	E5ERI2	Ostreococcus_lucimarinus_virus	4.7e-24	23.6
AUL84093.1\|1416588_1417533_+	transporter YfdV	NA	NA	NA	NA
AUL84094.1\|1417665_1418360_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL84095.1\|1418431_1419526_+	CoA:oxalate CoA-transferase	NA	NA	NA	NA
AUL84096.1\|1419581_1423175_-	two-component system sensor histidine kinase EvgS	A0A1V0SGX0	Hokovirus	1.3e-36	32.1
AUL84097.1\|1423179_1423794_-	DNA-binding response regulator	NA	NA	NA	NA
AUL84098.1\|1424209_1425373_+	multidrug resistance protein EmrK	NA	NA	NA	NA
AUL84099.1\|1425372_1426911_+	multidrug resistance protein EmrY	NA	NA	NA	NA
AUL84100.1\|1427018_1428347_-	D-serine ammonia-lyase	NA	NA	NA	NA
AUL87708.1\|1428813_1429809_+	transcriptional regulator	NA	NA	NA	NA
AUL84101.1\|1429816_1431250_-	glycosyl hydrolase family 32	F8WPR5	Bacillus_phage	9.1e-29	25.4
AUL84102.1\|1432137_1433351_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7
AUL87709.1\|1434558_1435110_+	replication protein O	M1FN81	Enterobacteria_phage	9.6e-104	99.5
AUL84103.1\|1435106_1435808_+	Replication protein P	A0A1U9AJJ8	Stx1_converting_phage	3.4e-130	100.0
AUL84104.1\|1435804_1436095_+	protein ren	A0A1I9LJP5	Stx_converting_phage	9.6e-47	100.0
AUL84105.1\|1436165_1436444_+	hypothetical protein	Q9ZWY1	Enterobacteria_phage	3.4e-49	100.0
AUL84106.1\|1436576_1436792_+	hypothetical protein	A0A1I9LJP7	Stx_converting_phage	1.3e-32	100.0
AUL84107.1\|1436802_1437039_+	restriction alleviation protein, Lar family	Q8HA09	Enterobacteria_phage	1.2e-39	100.0
AUL84108.1\|1436995_1437442_+	recombination protein NinB	A0A0N7C2V1	Escherichia_phage	2.4e-81	100.0
AUL84109.1\|1437438_1437966_+	phage N-6-adenine-methyltransferase	H6WZI7	Escherichia_phage	1.2e-100	99.4
AUL84110.1\|1437962_1438103_+	NinE family protein	A5VW90	Enterobacteria_phage	1.0e-14	100.0
AUL84111.1\|1438138_1438834_+\|transposase	IS1 family transposase	A0A0U2RK18	Escherichia_phage	3.1e-131	97.8
AUL84112.1\|1439194_1439929_+	phage antirepressor Ant	A0A0N7C203	Escherichia_phage	5.5e-123	99.6
AUL84113.1\|1440003_1440726_+	DNA-binding protein	A0A0P0ZCB2	Stx2-converting_phage	3.9e-129	99.6
AUL84114.1\|1440725_1441331_+	recombination protein NinG	Q8VNP2	Enterobacteria_phage	1.9e-97	100.0
AUL84115.1\|1441327_1441522_+	protein ninH	G9L694	Escherichia_phage	1.9e-30	100.0
AUL84116.1\|1441514_1441949_+	antitermination protein	Q777W5	Enterobacteria_phage	1.8e-81	99.3
AUL84117.1\|1441937_1442183_-	hypothetical protein	A0A0P0ZGS0	Escherichia_phage	5.0e-36	100.0
AUL84118.1\|1442197_1442350_+	DNA methylase	A0A2R2Z327	Escherichia_phage	4.0e-20	100.0
AUL84119.1\|1443060_1444998_+	sialate O-acetylesterase	A0A0P0ZBP4	Stx2-converting_phage	0.0e+00	96.4
AUL84120.1\|1445134_1445314_+	DUF1378 domain-containing protein	A0A2R2Z345	Escherichia_phage	1.4e-24	96.6
AUL84121.1\|1445354_1445627_+	DUF826 domain-containing protein	A0A0P0ZC09	Stx2-converting_phage	4.8e-24	100.0
AUL84122.1\|1445703_1445919_+\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
AUL84123.1\|1446305_1447037_+	host specificity protein J	Q687E8	Enterobacteria_phage	4.2e-123	99.6
AUL84124.1\|1447103_1447703_+	Ail/Lom family protein	A0A0P0ZE39	Stx2-converting_phage	8.2e-109	98.0
AUL84125.1\|1447767_1449081_+\|tail	phage tail protein	H6WZM9	Escherichia_phage	4.8e-77	97.9
AUL84126.1\|1449082_1449352_+\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	4.9e-45	98.9
AUL84127.1\|1449457_1450339_+	T3SS effector protein NleH	A5LH48	Enterobacteria_phage	1.1e-144	89.4
AUL84128.1\|1450569_1451268_+	T3SS effector protein NleD	NA	NA	NA	NA
AUL84129.1\|1451364_1452531_-\|integrase	integrase	Q716F9	Shigella_phage	1.6e-220	98.7
1452744:1452768	attL	NA	NA	NA	NA
AUL84130.1\|1452962_1454132_+\|integrase	integrase	A0A2R2Z2Y0	Escherichia_phage	3.7e-230	99.7
AUL84131.1\|1454115_1454298_-	DNA-binding protein	A0A2R2Z2X2	Escherichia_phage	4.1e-27	100.0
AUL84132.1\|1454376_1454754_-	hypothetical protein	A0A2R2Z2X7	Escherichia_phage	1.7e-51	98.4
AUL84133.1\|1454789_1455002_-	hypothetical protein	A0A0P0ZGA1	Escherichia_phage	7.1e-31	100.0
AUL84134.1\|1454961_1455588_-	adenine methylase	A0A2R2Z304	Escherichia_phage	1.0e-122	100.0
AUL84135.1\|1455584_1456016_-	regulator	A0A2R2Z303	Escherichia_phage	2.1e-74	99.3
AUL84136.1\|1456071_1456710_-	phage antirepressor Ant	A0A0P0ZG08	Escherichia_phage	5.5e-119	99.5
AUL84137.1\|1457033_1457762_-	hypothetical protein	A0A0P0ZD96	Stx2-converting_phage	7.9e-130	100.0
AUL84138.1\|1457857_1458454_-	DUF551 domain-containing protein	Q6H9Z7	Enterobacteria_phage	6.3e-117	99.5
AUL84139.1\|1458456_1458648_-	hypothetical protein	Q6H9Z6	Enterobacteria_phage	1.2e-26	100.0
AUL84140.1\|1458649_1459420_-	hypothetical protein	Q08J58	Stx2-converting_phage	1.5e-142	100.0
AUL84141.1\|1459416_1460076_-	hypothetical protein	A0A2I6TCG8	Escherichia_phage	3.4e-39	61.5
AUL84142.1\|1460084_1460495_-	hypothetical protein	A0A076G6X8	Escherichia_phage	2.0e-29	72.1
AUL84143.1\|1460491_1461106_-	hypothetical protein	A0A0P0ZFU9	Escherichia_phage	9.2e-55	71.7
AUL84144.1\|1461102_1461267_-	DUF2737 domain-containing protein	A0A2I6PID4	Escherichia_phage	4.6e-22	98.1
AUL84145.1\|1461277_1461574_-	RecBCD nuclease inhibitor	A5VWB0	Enterobacteria_phage	9.5e-50	98.0
AUL84146.1\|1461597_1462185_-	DUF669 domain-containing protein	G9L666	Escherichia_phage	5.4e-105	99.0
AUL84147.1\|1462181_1462862_-	ATP-binding protein	G9L667	Escherichia_phage	3.4e-127	100.0
AUL84148.1\|1462870_1463059_-	hypothetical protein	G9L668	Escherichia_phage	2.2e-28	100.0
AUL84149.1\|1463055_1463295_-	host cell division inhibitory peptide Kil	K7PL44	Enterobacteria_phage	2.6e-37	97.5
AUL84150.1\|1463493_1463964_-	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	1.8e-87	99.4
AUL84151.1\|1464023_1464296_-	antitermination protein N	A0A0N7C217	Escherichia_phage	5.7e-41	100.0
AUL84152.1\|1464273_1464456_-	hypothetical protein	A0A0N7C057	Escherichia_phage	2.8e-28	100.0
AUL84153.1\|1464752_1464914_+	hypothetical protein	A0A0P0ZCZ3	Stx2-converting_phage	2.7e-22	100.0
AUL84154.1\|1465024_1465546_-	hypothetical protein	A0A0N7BTU4	Escherichia_phage	1.8e-88	100.0
AUL84155.1\|1466047_1466743_-	phage repressor	A0A0N7BTS4	Escherichia_phage	8.6e-134	100.0
AUL84156.1\|1466818_1467034_+	XRE family transcriptional regulator	A0A0N7C2U7	Escherichia_phage	2.2e-35	100.0
AUL84157.1\|1467175_1467475_+	hypothetical protein	A0A0P0ZBJ0	Stx2-converting_phage	3.7e-49	99.0
AUL84158.1\|1467497_1467770_+	hypothetical protein	G9L679	Escherichia_phage	2.7e-43	100.0
AUL84159.1\|1467832_1468720_+	replication protein	A5VW95	Enterobacteria_phage	4.9e-142	98.0
AUL84160.1\|1468716_1470093_+	replicative DNA helicase	A0A0P0ZC27	Stx2-converting_phage	2.4e-252	99.1
AUL84161.1\|1470574_1470790_+	hypothetical protein	A0A1I9LJP7	Stx_converting_phage	1.3e-32	100.0
AUL84162.1\|1470800_1471037_+	restriction alleviation protein, Lar family	Q8HA09	Enterobacteria_phage	1.2e-39	100.0
AUL84163.1\|1470993_1471440_+	recombination protein NinB	A0A0N7C2V1	Escherichia_phage	2.4e-81	100.0
AUL84164.1\|1471436_1471964_+	phage N-6-adenine-methyltransferase	H6WZI7	Escherichia_phage	1.2e-100	99.4
AUL84165.1\|1471960_1472143_+	NinE family protein	A0A0N7C1X3	Escherichia_phage	5.7e-29	100.0
AUL84166.1\|1472418_1473096_+	phage antirepressor Ant	A0A0P0ZC44	Stx2-converting_phage	4.0e-128	98.7
AUL84167.1\|1473170_1473893_+	DNA-binding protein	A0A0P0ZBS6	Stx2-converting_phage	3.0e-129	99.6
AUL84168.1\|1473892_1474183_+	DUF1364 domain-containing protein	K7PKV0	Enterobacteria_phage	3.4e-52	100.0
AUL84169.1\|1474179_1474557_+	RusA family crossover junction endodeoxyribonuclease	A5VW85	Enterobacteria_phage	1.1e-37	64.9
AUL84170.1\|1474553_1475375_+	antitermination protein	K7P7B9	Enterobacteria_phage	4.1e-82	61.2
AUL84171.1\|1475601_1475799_+	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	9.8e-27	96.9
AUL84172.1\|1475868_1477065_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL84173.1\|1477320_1478517_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL84174.1\|1478772_1479969_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL87710.1\|1480077_1480257_-	hypothetical protein	NA	NA	NA	NA
AUL84175.1\|1480295_1481009_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUL84176.1\|1481464_1481692_+	hypothetical protein	Q5MBW5	Stx1-converting_phage	7.8e-28	98.3
AUL84177.1\|1481818_1483756_+	sialate O-acetylesterase	A0A1I9LJQ8	Stx_converting_phage	0.0e+00	99.8
AUL84178.1\|1483890_1484070_+	DUF1378 domain-containing protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
AUL84179.1\|1484110_1484383_+	DUF826 domain-containing protein	A0A1I9LJR2	Stx_converting_phage	1.2e-22	100.0
AUL84180.1\|1484459_1484675_+\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
AUL84181.1\|1484679_1485213_+	lysozyme	V5USG4	Shigella_phage	7.9e-103	100.0
AUL84182.1\|1485487_1486054_+	hypothetical protein	A0A0H4IQ87	Shigella_phage	1.4e-105	100.0
AUL84183.1\|1486210_1486678_+\|lysis	lysis protein	A0A0H4IT10	Shigella_phage	1.2e-78	100.0
AUL87711.1\|1486858_1487356_+	DNA-binding protein	A0A0H4IPL1	Shigella_phage	2.4e-93	100.0
AUL84184.1\|1487352_1487610_+	hypothetical protein	A0A0P0ZBT1	Stx2-converting_phage	5.0e-39	100.0
AUL84185.1\|1488009_1488816_+\|terminase	terminase	A0A1U9AJA9	Stx1_converting_phage	1.7e-133	100.0
AUL84186.1\|1488796_1490503_+\|terminase	terminase	A0A1U9AJA6	Stx1_converting_phage	0.0e+00	100.0
AUL84187.1\|1490502_1492647_+\|portal	portal protein	A0A2R2Z346	Escherichia_phage	0.0e+00	99.9
AUL84188.1\|1492804_1493812_+	hypothetical protein	A0A2R2Z355	Escherichia_phage	1.5e-179	99.7
AUL84189.1\|1493835_1495050_+\|capsid	N4-gp56 family major capsid protein	A0A2R2Z358	Escherichia_phage	1.3e-233	100.0
AUL84190.1\|1495105_1495495_+	hypothetical protein	A0A2R2Z353	Escherichia_phage	9.9e-63	100.0
AUL84191.1\|1495544_1496006_+	hypothetical protein	A0A2R2Z354	Escherichia_phage	7.8e-75	100.0
AUL84192.1\|1495989_1496553_+	hypothetical protein	A0A2R2Z349	Escherichia_phage	3.2e-102	100.0
AUL84193.1\|1496552_1497203_+	hypothetical protein	A0A0H4J3F2	Shigella_phage	3.9e-120	99.5
AUL84194.1\|1497199_1499137_+\|tail	phage tail protein	A0A1I9LJS9	Stx_converting_phage	1.1e-64	100.0
AUL84195.1\|1499138_1499408_+\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	6.4e-45	98.9
AUL84196.1\|1499492_1499726_+	hypothetical protein	A0A0N7CHY0	Escherichia_phage	1.6e-39	100.0
AUL84197.1\|1499621_1499864_-	outer membrane protein	NA	NA	NA	NA
AUL87712.1\|1500029_1501655_+	hypothetical protein	A0A088CBK0	Shigella_phage	0.0e+00	99.8
AUL84198.1\|1501651_1502920_+	host specificity protein J	A0A2L1IV54	Escherichia_phage	2.6e-213	89.5
AUL84199.1\|1502934_1503213_+	outer membrane protein	A0A2R2Z367	Escherichia_phage	1.1e-50	100.0
AUL84200.1\|1503218_1503836_+	hypothetical protein	A0A2R2Z362	Escherichia_phage	1.1e-121	100.0
AUL84201.1\|1503926_1504661_+	outer membrane protein	A0A2R2Z365	Escherichia_phage	1.3e-135	100.0
AUL84202.1\|1504591_1504837_-	hypothetical protein	Q7Y2U2	Escherichia_phage	5.7e-40	100.0
AUL84203.1\|1504893_1505034_+	Hok/Gef family protein	A0A2R2X2B4	Escherichia_phage	3.1e-19	100.0
AUL84204.1\|1505090_1505492_+	hypothetical protein	A0A2R2Z359	Escherichia_phage	3.7e-73	100.0
AUL84205.1\|1505585_1506242_+	hypothetical protein	A0A2R2Z361	Escherichia_phage	2.4e-109	100.0
AUL84206.1\|1506244_1506691_+	hypothetical protein	A0A2R2Z357	Escherichia_phage	6.2e-77	100.0
AUL84207.1\|1506700_1506952_+\|bacteriocin	bacteriocin	A0A2R2Z351	Escherichia_phage	7.9e-13	100.0
AUL84208.1\|1506962_1508228_+	hypothetical protein	A0A1I9LJU3	Stx_converting_phage	9.9e-205	98.8
AUL84209.1\|1508296_1516648_+	hypothetical protein	Q08J70	Stx2-converting_phage	0.0e+00	94.3
AUL84210.1\|1516869_1517802_-	hypothetical protein	E7DYY8	Enterobacteria_phage	2.1e-167	99.7
1516771:1516795	attR	NA	NA	NA	NA
AUL84211.1\|1517899_1518070_+	hypothetical protein	NA	NA	NA	NA
AUL84212.1\|1518095_1518851_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
AUL84213.1\|1519032_1520091_-	hypothetical protein	NA	NA	NA	NA
AUL84214.1\|1520456_1521797_-	long-chain fatty acid transporter	NA	NA	NA	NA
AUL84215.1\|1521832_1522084_+	hypothetical protein	NA	NA	NA	NA
AUL84216.1\|1522168_1522453_+	hypothetical protein	NA	NA	NA	NA
AUL84217.1\|1522633_1523944_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
AUL84218.1\|1523943_1526088_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
AUL84219.1\|1526290_1526776_+	phosphohistidine phosphatase	NA	NA	NA	NA
AUL84220.1\|1527450_1528014_+	type 1 fimbrial protein	NA	NA	NA	NA
AUL84221.1\|1530995_1531520_+	fimbrial protein	NA	NA	NA	NA
AUL84222.1\|1531521_1532379_+	DUF2544 domain-containing protein	NA	NA	NA	NA
AUL84223.1\|1532500_1533052_-	endonuclease SmrB	NA	NA	NA	NA
AUL84224.1\|1533217_1534150_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AUL84225.1\|1534184_1535270_+	chorismate synthase	A0A291AU41	Pandoravirus	9.1e-90	48.4
AUL84226.1\|1535273_1536098_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
AUL84227.1\|1536097_1536907_+	hypothetical protein	NA	NA	NA	NA
AUL84228.1\|1536906_1537455_+	elongation factor P hydroxylase	NA	NA	NA	NA
AUL84229.1\|1537488_1537767_+	hypothetical protein	NA	NA	NA	NA
AUL84230.1\|1537887_1539894_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
AUL84231.1\|1540052_1541273_+	beta-ketoacyl-[acyl-carrier-protein] synthase I	NA	NA	NA	NA
AUL87713.1\|1541418_1541640_-	hypothetical protein	NA	NA	NA	NA
AUL84232.1\|1541581_1542760_+	arabinose transporter	NA	NA	NA	NA
AUL84233.1\|1542756_1543752_-	flagella biosynthesis regulator Flk	NA	NA	NA	NA
AUL84234.1\|1544020_1544914_-	type VI secretion protein	NA	NA	NA	NA
AUL84235.1\|1544918_1545251_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
AUL84236.1\|1545513_1545654_-	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	7.0e-19	100.0
AUL84237.1\|1545845_1546106_-	hypothetical protein	NA	NA	NA	NA
AUL84238.1\|1548108_1549322_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7
AUL84239.1\|1549470_1549794_-\|tail	phage tail protein	A0A0A7NQ97	Enterobacteria_phage	1.1e-43	100.0
AUL84240.1\|1549951_1551136_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	8.1e-225	99.0
AUL84241.1\|1551135_1551648_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	3.2e-93	100.0
AUL84242.1\|1551702_1552068_+\|tail	phage tail protein	A0A0A7NPZ0	Enterobacteria_phage	1.7e-56	98.3
AUL84243.1\|1551995_1552232_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	1.9e-21	96.1
AUL84244.1\|1552218_1555026_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	95.8
AUL84245.1\|1555032_1555527_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.1e-85	99.4
AUL87714.1\|1555779_1556256_+	serine acetyltransferase	NA	NA	NA	NA
AUL84246.1\|1556299_1556878_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.9e-95	88.5
AUL84247.1\|1556877_1559340_-\|tail	phage tail protein	A0A0A7NV63	Enterobacteria_phage	8.1e-110	97.2
AUL84248.1\|1559342_1559873_-\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	5.1e-94	99.4
AUL84249.1\|1559865_1560762_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	1.1e-154	97.7
AUL84250.1\|1560765_1561116_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	2.7e-59	99.1
AUL84251.1\|1561189_1562402_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7
AUL84252.1\|1563495_1564653_+	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	1.7e-22	29.3
AUL84253.1\|1564718_1565732_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AUL84254.1\|1565731_1566544_+\|tRNA	tRNA pseudouridine(38-40) synthase	NA	NA	NA	NA
AUL84255.1\|1566626_1567286_+	protein DedA	NA	NA	NA	NA
AUL84256.1\|1567441_1568356_+	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA
AUL84257.1\|1568425_1569694_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
AUL84258.1\|1569683_1570346_+	cell division protein DedD	NA	NA	NA	NA
AUL84259.1\|1570604_1571093_+	colicin V production protein	NA	NA	NA	NA
AUL84260.1\|1571129_1572647_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.9e-87	44.0
AUL84261.1\|1572741_1573311_+	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA	NA	NA	NA
AUL84262.1\|1573576_1574359_+	lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT	NA	NA	NA	NA
AUL84263.1\|1574579_1575362_+	histidine ABC transporter substrate-binding protein HisJ	NA	NA	NA	NA
AUL84264.1\|1575451_1576138_+	histidine ABC transporter permease	NA	NA	NA	NA
AUL84265.1\|1576134_1576851_+	histidine ABC transporter permease	NA	NA	NA	NA
AUL84266.1\|1576858_1577632_+	histidine transport ATP-binding protein HisP	G9BWD6	Planktothrix_phage	2.4e-23	38.1
AUL84267.1\|1577828_1578719_+\|transposase	ISNCY family transposase	Q2A0A7	Sodalis_phage	1.2e-66	43.9

DBSCAN-SWA_3

1755388 : 1867507

107

Enterobacteria_phage(38.81%)

lysis,tRNA,integrase,holin,terminase,tail,transposase,capsid

attL 1753099:1753115|attR 1834477:1834493

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1753099:1753115	attL	NA	NA	NA	NA
AUL84411.1\|1755388_1756084_-\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
AUL84412.1\|1756080_1756479_-	hypothetical protein	NA	NA	NA	NA
AUL87721.1\|1756718_1757669_+\|tRNA	tRNA dihydrouridine(16) synthase DusC	NA	NA	NA	NA
AUL84413.1\|1758056_1758140_-	hypothetical protein	NA	NA	NA	NA
AUL84414.1\|1758363_1759800_+	multidrug transporter permease	NA	NA	NA	NA
AUL84415.1\|1759852_1760614_+	SDR family oxidoreductase	NA	NA	NA	NA
AUL84416.1\|1760743_1761322_-	DedA family protein	NA	NA	NA	NA
AUL84417.1\|1761491_1762079_+	YIP1 family protein	NA	NA	NA	NA
AUL84418.1\|1762252_1763185_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
AUL84419.1\|1763222_1764938_-	D-lactate dehydrogenase	NA	NA	NA	NA
AUL84420.1\|1765133_1767431_+	beta-glucosidase BglX	NA	NA	NA	NA
AUL84421.1\|1767682_1768600_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL84422.1\|1768606_1769764_+	osmoprotectant uptake system permease	NA	NA	NA	NA
AUL84423.1\|1769756_1770683_+	ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-24	35.1
AUL84424.1\|1770687_1771419_+	osmoprotectant uptake system permease	NA	NA	NA	NA
AUL84425.1\|1771399_1771507_-	hypothetical protein	NA	NA	NA	NA
AUL84426.1\|1771566_1772268_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	3.9e-102	99.5
AUL84427.1\|1772288_1773575_-\|integrase	site-specific integrase	Q9EY96	Enterobacteria_phage	7.6e-253	100.0
AUL84428.1\|1773608_1773863_-	excisionase	Q859D3	Escherichia_coli_phage	3.0e-44	100.0
AUL84429.1\|1773881_1774016_-	hypothetical protein	A0A0P0ZDP5	Stx2-converting_phage	4.9e-22	100.0
AUL84430.1\|1774019_1774262_-	DUF4222 domain-containing protein	B6DZ51	Enterobacteria_phage	1.5e-37	100.0
AUL87722.1\|1774349_1774610_-	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	1.5e-43	82.3
AUL84431.1\|1775100_1775871_-	hypothetical protein	Q6H9Z5	Enterobacteria_phage	6.2e-141	98.8
AUL84432.1\|1775867_1776089_-	conjugal transfer protein TraR	A0A1I9LJM6	Stx_converting_phage	2.9e-35	100.0
AUL84433.1\|1776187_1776469_-	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	7.2e-47	98.9
AUL84434.1\|1776479_1776671_-	hypothetical protein	A0A0P0ZC67	Stx2-converting_phage	2.1e-26	98.4
AUL87723.1\|1776643_1776826_-	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	6.9e-27	96.7
AUL84435.1\|1776822_1777503_-	exonuclease	B6DZ61	Enterobacteria_phage	3.0e-131	98.2
AUL84436.1\|1777499_1778285_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
AUL84437.1\|1778290_1778587_-	host-nuclease inhibitor protein Gam	Q9EYA6	Enterobacteria_phage	4.3e-50	100.0
AUL84438.1\|1778766_1779980_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7
AUL84439.1\|1780091_1780475_-	antitermination protein	G9L671	Escherichia_phage	3.9e-64	100.0
AUL84440.1\|1781130_1782177_-	serine/threonine protein kinase	G9L673	Escherichia_phage	1.3e-205	99.4
AUL84441.1\|1782170_1782632_-	hypothetical protein	G9L674	Escherichia_phage	1.9e-76	99.3
AUL84442.1\|1782698_1783040_-	DUF3024 domain-containing protein	G9L675	Escherichia_phage	2.8e-61	98.2
AUL84443.1\|1783100_1783808_-	phage repressor protein C	G9L676	Escherichia_phage	1.5e-133	100.0
AUL84444.1\|1783886_1784114_+	DNA-binding protein	G9L677	Escherichia_phage	7.8e-36	100.0
AUL84445.1\|1784252_1784549_+	hypothetical protein	Q6H9X8	Enterobacteria_phage	5.2e-48	100.0
AUL84446.1\|1784581_1785520_+	Replication protein O	A0A1I9LJP3	Stx_converting_phage	1.3e-172	100.0
AUL84447.1\|1785516_1786218_+	Replication protein P	K7P6G2	Enterobacteria_phage	8.4e-129	99.1
AUL84448.1\|1786214_1786505_+	protein ren	A0A1I9LJP5	Stx_converting_phage	9.6e-47	100.0
AUL84449.1\|1786560_1787019_+	recombination protein NinB	M1FPM8	Enterobacteria_phage	1.6e-80	100.0
AUL84450.1\|1787015_1787543_+	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	2.3e-99	98.9
AUL84451.1\|1787724_1788774_+	hypothetical protein	Q9T208	Enterobacteria_phage	1.3e-181	100.0
AUL84452.1\|1788925_1789648_+	DNA-binding protein	O48426	Enterobacteria_phage	3.6e-127	96.7
AUL84453.1\|1789647_1790253_+	protein NinG	Q5TJL9	Enterobacteria_phage	8.1e-96	99.0
AUL84454.1\|1790249_1790921_+	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	1.6e-129	96.9
AUL84455.1\|1790911_1791400_+	antiterminator	Q5TJL7	Enterobacteria_phage	7.7e-89	99.4
AUL84456.1\|1792477_1794328_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	98.5
AUL84457.1\|1794451_1794613_-	hypothetical protein	NA	NA	NA	NA
AUL84458.1\|1794611_1794827_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	7.7e-33	98.6
AUL84459.1\|1794826_1795324_+	lysozyme	A0A0N7KZA0	Stx2-converting_phage	2.4e-90	97.0
AUL84460.1\|1795320_1795758_+\|lysis	lysis protein	A0A0P0ZBQ9	Stx2-converting_phage	4.2e-70	96.6
AUL84461.1\|1795960_1796458_+	DNA-binding protein	A0A0P0ZBU2	Stx2-converting_phage	3.6e-94	100.0
AUL84462.1\|1796454_1796712_+	hypothetical protein	A0A0P0ZBT1	Stx2-converting_phage	5.0e-39	100.0
AUL84463.1\|1796788_1796923_-	hypothetical protein	NA	NA	NA	NA
AUL84464.1\|1797174_1797402_-	DUF3950 domain-containing protein	A0A0P0ZE23	Stx2-converting_phage	1.7e-35	100.0
AUL84465.1\|1797443_1797809_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	4.0e-66	99.2
AUL84466.1\|1797777_1797915_+	DNase	H6WZK7	Escherichia_phage	6.6e-06	75.0
AUL84467.1\|1798098_1798662_+\|terminase	terminase small subunit	A0A0P0ZD56	Stx2-converting_phage	3.3e-83	92.5
AUL84468.1\|1798658_1800320_+\|terminase	terminase	A0A0P0ZEI4	Stx2-converting_phage	0.0e+00	98.6
AUL84469.1\|1800383_1802321_+\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	100.0
AUL87724.1\|1802365_1802587_+	hypothetical protein	A0A0P0ZD92	Stx2-converting_phage	5.8e-36	100.0
AUL84470.1\|1805790_1806237_+	hypothetical protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
AUL84471.1\|1806233_1806578_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
AUL84472.1\|1807772_1808054_+	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	2.3e-45	98.9
AUL84473.1\|1811333_1811675_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	6.9e-60	96.5
AUL84474.1\|1811674_1812373_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	3.1e-131	98.7
AUL84475.1\|1813025_1813706_+\|tail	tail assembly protein	A0A0P0ZDX8	Stx2-converting_phage	4.1e-112	96.4
AUL84476.1\|1813941_1817418_+\|tail	phage tail protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	97.3
AUL84477.1\|1817484_1818084_+	Ail/Lom family protein	A0A0P0ZCF6	Stx2-converting_phage	1.0e-111	100.0
AUL84478.1\|1818148_1819462_+\|tail	phage tail protein	H6WZM9	Escherichia_phage	4.8e-77	97.9
AUL84479.1\|1819463_1819733_+\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	4.9e-45	98.9
AUL84480.1\|1819843_1820425_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	4.3e-54	60.0
AUL84481.1\|1820756_1822001_-	hypothetical protein	H6WZN2	Escherichia_phage	2.0e-229	91.1
AUL87725.1\|1822653_1823682_-	secretion protein EspV	Q6H9S1	Enterobacteria_phage	2.0e-195	99.4
AUL84482.1\|1823850_1824544_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL84483.1\|1824742_1826428_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	8.1e-303	99.3
AUL84484.1\|1826424_1827144_+	DNA-binding response regulator	NA	NA	NA	NA
AUL84485.1\|1827190_1827661_+	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	2.6e-81	99.4
AUL84486.1\|1827700_1828162_-	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	2.4e-76	99.3
AUL84487.1\|1828286_1829684_-	hypothetical protein	Q9EYF6	Enterobacteria_phage	2.9e-237	67.0
AUL84488.1\|1829680_1830817_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	4.2e-162	97.1
AUL84489.1\|1830809_1833089_-	hypothetical protein	NA	NA	NA	NA
AUL84490.1\|1833099_1834188_-	MoxR family ATPase	NA	NA	NA	NA
AUL84491.1\|1834493_1834811_-	hypothetical protein	NA	NA	NA	NA
1834477:1834493	attR	NA	NA	NA	NA
AUL84492.1\|1842447_1844481_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.8e-54	27.6
AUL84493.1\|1844612_1845722_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AUL84494.1\|1845984_1846266_+	DUF2574 domain-containing protein	NA	NA	NA	NA
AUL84495.1\|1846557_1847100_+	hypothetical protein	NA	NA	NA	NA
AUL84496.1\|1847180_1847855_+	fimbrial assembly protein	NA	NA	NA	NA
AUL84497.1\|1849265_1849960_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL84498.1\|1851138_1852173_+	adhesin	NA	NA	NA	NA
AUL84499.1\|1852254_1852593_-	heavy metal resistance protein	NA	NA	NA	NA
AUL84500.1\|1852814_1853660_-	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
AUL84501.1\|1853780_1854053_+	transcriptional regulator	NA	NA	NA	NA
AUL84502.1\|1854275_1855064_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
AUL84503.1\|1855060_1855861_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
AUL84504.1\|1855925_1856744_+	hypothetical protein	D0R7H8	Paenibacillus_phage	1.7e-24	38.5
AUL84505.1\|1856795_1857542_+	transcriptional regulator	NA	NA	NA	NA
AUL84506.1\|1858477_1859482_-	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	2.2e-13	29.4
AUL84507.1\|1861011_1862064_+	fructose-bisphosphate aldolase	NA	NA	NA	NA
AUL84508.1\|1862371_1863226_+	tagatose-1,6-bisphosphate aldolase	NA	NA	NA	NA
AUL84509.1\|1864531_1864984_+	PTS galactitol transporter subunit IIA	NA	NA	NA	NA
AUL84510.1\|1865014_1865299_+	PTS galactitol transporter subunit IIB	NA	NA	NA	NA
AUL84511.1\|1865302_1866658_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
AUL84512.1\|1866813_1867507_+\|transposase	IS1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1889773 : 1900606

Enterobacteria_phage(45.45%)

tail,integrase,terminase,lysis

attL 1895122:1895136|attR 1900439:1900453

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL84533.1\|1889773_1890463_+	antitermination protein	I6PDF8	Cronobacter_phage	1.5e-58	48.1
AUL84534.1\|1890673_1891390_+	hypothetical protein	NA	NA	NA	NA
AUL84535.1\|1891933_1892161_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	4.2e-21	90.4
AUL84536.1\|1892627_1892891_-	hypothetical protein	NA	NA	NA	NA
AUL84537.1\|1893016_1893550_+	lysozyme	B6DZ92	Enterobacteria_phage	2.4e-99	95.5
AUL84538.1\|1893672_1893888_+	hypothetical protein	NA	NA	NA	NA
AUL84539.1\|1894039_1894507_+\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	2.1e-67	87.7
AUL84540.1\|1894589_1894730_+	hypothetical protein	NA	NA	NA	NA
AUL84541.1\|1894970_1895285_+	PerC family transcriptional regulator	NA	NA	NA	NA
1895122:1895136	attL	NA	NA	NA	NA
AUL84542.1\|1895366_1895591_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	4.1e-21	92.7
AUL84543.1\|1895985_1896483_+\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.0e-11	32.5
AUL84544.1\|1897642_1897909_+	hypothetical protein	Q9ZXG3	Shigella_phage	1.6e-43	95.5
AUL84545.1\|1897931_1898303_+\|integrase	integrase	K7PH54	Enterobacteria_phage	1.1e-58	95.1
AUL84546.1\|1898426_1899215_-	cell division protein	A5LH49	Enterobacteria_phage	1.6e-144	98.1
AUL87726.1\|1899321_1899507_+	hypothetical protein	NA	NA	NA	NA
AUL84547.1\|1899481_1900363_-	T3SS effector protein NleH	A5LH48	Enterobacteria_phage	3.9e-147	90.4
AUL84548.1\|1900468_1900606_-\|tail	phage tail protein	A0A2R2Z347	Escherichia_phage	3.7e-17	95.6
1900439:1900453	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1978074 : 2067654

109

Escherichia_phage(38.81%)

head,lysis,plate,holin,protease,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL84612.1\|1978074_1979226_-\|transposase	IS30 family transposase IS30	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
AUL84613.1\|1979716_1980775_+	FUSC family protein	NA	NA	NA	NA
AUL84614.1\|1980946_1981276_+	hypothetical protein	NA	NA	NA	NA
AUL84615.1\|1981376_1981511_-	ethanolamine utilization protein	NA	NA	NA	NA
AUL84616.1\|1981968_1983181_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7
AUL84617.1\|1984887_1985010_+	cobalamin biosynthesis protein	NA	NA	NA	NA
AUL84618.1\|1985161_1985707_+	adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase	NA	NA	NA	NA
AUL84619.1\|1985703_1986447_+	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
AUL84620.1\|1986458_1987538_+	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
AUL84621.1\|1987602_1988535_+	L,D-transpeptidase	NA	NA	NA	NA
AUL84622.1\|1988991_1989909_+	nitrogen assimilation regulatory protein nac	NA	NA	NA	NA
AUL84623.1\|1990010_1990961_+	transcriptional regulator Cbl	NA	NA	NA	NA
AUL84624.1\|1991234_1992722_+	MATE family multidrug exporter	NA	NA	NA	NA
AUL84625.1\|1993096_1993306_+	hypothetical protein	NA	NA	NA	NA
AUL84626.1\|1993350_1994067_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AUL84627.1\|1994409_1995864_-	AMP nucleosidase	NA	NA	NA	NA
AUL84628.1\|1995965_1997282_-	MFS transporter	NA	NA	NA	NA
AUL84629.1\|1997596_1998649_+	hypothetical protein	NA	NA	NA	NA
AUL84630.1\|2002206_2003420_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	3.5e-167	98.0
AUL87731.1\|2007788_2008586_-	protein MtfA	NA	NA	NA	NA
AUL84631.1\|2009525_2009951_+	Rha family transcriptional regulator	NA	NA	NA	NA
AUL84632.1\|2010022_2011093_+	phage replisome organizer	A0A088CD36	Shigella_phage	8.5e-64	65.7
AUL84633.1\|2011099_2011846_+	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	1.8e-113	82.8
AUL84634.1\|2011867_2012584_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	2.1e-71	62.6
AUL87732.1\|2012616_2012898_+	DNA-binding protein	A0A222YXX1	Escherichia_phage	1.0e-29	73.6
AUL84635.1\|2012894_2013122_+	hypothetical protein	A0A1B5FPG2	Escherichia_phage	5.1e-11	49.3
AUL84636.1\|2013114_2013426_+	hypothetical protein	A0A0U2QV73	Escherichia_phage	7.2e-56	92.2
AUL84637.1\|2013772_2014330_+	DUF551 domain-containing protein	A0A0N7KZV3	Escherichia_phage	2.8e-34	41.7
AUL84638.1\|2014563_2014776_+	Hok/Gef family protein	A0A0P0ZAX5	Stx2-converting_phage	6.0e-30	100.0
AUL84639.1\|2014895_2015240_+	TIGR00156 family protein	A0A1I9LJU6	Stx_converting_phage	6.1e-56	99.1
AUL84640.1\|2015361_2015634_+	hypothetical protein	NA	NA	NA	NA
AUL84641.1\|2015635_2016685_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.4e-110	54.3
AUL84642.1\|2016697_2017057_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	5.0e-37	63.5
AUL84643.1\|2017065_2017620_+	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	6.8e-65	66.9
AUL84644.1\|2017844_2018042_+	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	7.5e-27	95.4
AUL84645.1\|2018176_2018890_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUL84646.1\|2019643_2020381_-	protein mom	A0A0C4UQZ7	Shigella_phage	1.7e-103	79.0
AUL84647.1\|2020334_2020535_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
AUL87733.1\|2020802_2021114_+	hypothetical protein	NA	NA	NA	NA
AUL84648.1\|2021152_2021398_-	DUF826 domain-containing protein	NA	NA	NA	NA
AUL84649.1\|2021433_2021616_-	DUF1378 domain-containing protein	S5MBZ5	Escherichia_phage	1.3e-09	54.4
AUL84650.1\|2021762_2023802_-	sialate O-acetylesterase	S5MDQ7	Escherichia_phage	4.3e-274	79.4
AUL84651.1\|2023901_2024462_-	DNA-invertase	A0A0C4UR34	Shigella_phage	4.3e-75	75.7
AUL84652.1\|2024475_2024661_-	hypothetical protein	NA	NA	NA	NA
AUL87735.1\|2024683_2024887_+\|tail	phage tail protein	NA	NA	NA	NA
AUL87734.1\|2024966_2025488_+\|tail	phage tail protein	A0A0U2QV64	Escherichia_phage	2.1e-47	52.6
AUL84653.1\|2025522_2026434_-\|tail	phage tail protein	C9DGQ8	Escherichia_phage	2.9e-36	47.5
AUL84654.1\|2026433_2026994_-	DUF2313 domain-containing protein	C9DGQ7	Escherichia_phage	2.3e-44	48.1
AUL84655.1\|2026984_2028070_-	hypothetical protein	A0A0C4UQU9	Shigella_phage	1.1e-98	53.2
AUL84656.1\|2028066_2028504_-	hypothetical protein	A0A0C4UR04	Shigella_phage	1.9e-38	53.5
AUL84657.1\|2028496_2029111_-\|plate	phage baseplate assembly protein V	A0A0C4UQZ3	Shigella_phage	4.7e-51	51.0
AUL84658.1\|2029100_2030225_-\|tail	phage tail protein	C9DGQ3	Escherichia_phage	2.9e-91	48.5
AUL84659.1\|2030208_2031579_-	multidrug DMT transporter permease	C9DGQ2	Escherichia_phage	1.0e-53	33.1
AUL84660.1\|2031544_2033620_-\|tail	tail tape measure protein	A0A0C4UQU8	Shigella_phage	3.7e-71	37.7
AUL84661.1\|2033622_2033805_-	hypothetical protein	C9DGQ0	Escherichia_phage	3.2e-08	54.8
AUL84662.1\|2033746_2034223_-	hypothetical protein	A0A0C4UR03	Shigella_phage	1.0e-21	50.8
AUL84663.1\|2034237_2034603_-\|tail	phage tail protein	C9DGP8	Escherichia_phage	2.0e-25	51.7
AUL84664.1\|2034611_2036114_-\|tail	phage tail protein	C9DGP7	Escherichia_phage	5.6e-138	51.3
AUL84665.1\|2036110_2036356_-	DUF2635 domain-containing protein	C9DGP6	Escherichia_phage	2.8e-07	54.5
AUL84666.1\|2036356_2036917_-	DUF1834 domain-containing protein	A0A0C4UQU7	Shigella_phage	1.1e-41	47.7
AUL84667.1\|2036913_2037333_-	DUF1320 domain-containing protein	A0A0C4UR02	Shigella_phage	4.7e-34	53.6
AUL84668.1\|2037329_2037734_-	hypothetical protein	NA	NA	NA	NA
AUL84669.1\|2037777_2038725_-\|head	head protein	A0A0C4UQR9	Shigella_phage	1.2e-122	67.2
AUL84670.1\|2038724_2039849_-\|protease	protease	A0A0C4UQU6	Shigella_phage	2.9e-78	47.9
AUL84671.1\|2040025_2040499_-	phage virion morphogenesis protein	A0A0C4UR01	Shigella_phage	1.7e-37	53.9
AUL84672.1\|2040620_2041952_-\|head	phage head morphogenesis protein	A0A0C4UQY9	Shigella_phage	3.9e-151	58.8
AUL87736.1\|2041935_2043525_-	DUF935 domain-containing protein	A0A0C4UQR8	Shigella_phage	1.4e-168	57.7
AUL84673.1\|2043524_2045189_-	hypothetical protein	A0A0C4UR29	Shigella_phage	8.1e-231	73.2
AUL84674.1\|2045188_2045770_-	DUF3486 domain-containing protein	A0A0C4UQU5	Shigella_phage	1.9e-49	57.0
AUL84675.1\|2045772_2046063_-	hypothetical protein	A0A0C4UR00	Shigella_phage	4.7e-25	63.2
AUL84676.1\|2046059_2046368_-	DUF2730 domain-containing protein	NA	NA	NA	NA
AUL84677.1\|2046348_2046576_-	conjugal transfer protein TraR	NA	NA	NA	NA
AUL87737.1\|2046585_2047032_-	lysozyme	B6SD19	Bacteriophage	1.2e-11	48.0
AUL84678.1\|2047250_2047751_-	endolysin	B6SD29	Bacteriophage	3.0e-27	42.6
AUL84679.1\|2047822_2048248_-	transcriptional regulator	NA	NA	NA	NA
AUL84680.1\|2048317_2048827_-	DUF1018 domain-containing protein	A0A0C4UQU3	Shigella_phage	1.1e-26	41.9
AUL84681.1\|2048823_2049120_-	hypothetical protein	NA	NA	NA	NA
AUL84682.1\|2049109_2049307_-	hypothetical protein	A0A291AXE7	Shigella_phage	1.2e-05	34.5
AUL87738.1\|2049299_2049632_-	hypothetical protein	NA	NA	NA	NA
AUL84683.1\|2049647_2050016_-	hypothetical protein	NA	NA	NA	NA
AUL84684.1\|2050012_2050324_-	hypothetical protein	NA	NA	NA	NA
AUL84685.1\|2050320_2050872_-	AsnC family protein	NA	NA	NA	NA
AUL84686.1\|2050875_2051391_-	hypothetical protein	C9DGM0	Escherichia_phage	1.2e-47	55.4
AUL84687.1\|2051390_2051924_-	hypothetical protein	A0A0C4UQU2	Shigella_phage	5.9e-66	66.7
AUL84688.1\|2051927_2052470_-	hypothetical protein	A0A0C4UQZ6	Shigella_phage	4.9e-28	39.4
AUL84689.1\|2052567_2053098_-	host-nuclease inhibitor protein Gam	C9DGL8	Escherichia_phage	1.9e-48	57.1
AUL84690.1\|2053109_2053403_-	hypothetical protein	NA	NA	NA	NA
AUL84691.1\|2053407_2053680_-	hypothetical protein	NA	NA	NA	NA
AUL84692.1\|2053676_2053958_-	host nuclease inhibitor protein	I6WB15	Burkholderia_virus	2.8e-11	47.4
AUL84693.1\|2053959_2054214_-	hypothetical protein	NA	NA	NA	NA
AUL84694.1\|2054226_2054448_-	hypothetical protein	NA	NA	NA	NA
AUL84695.1\|2054450_2055383_-	transcriptional regulator	A0A0C4UQR3	Shigella_phage	1.2e-69	48.3
AUL84696.1\|2055454_2057545_-\|transposase	transposase	A0A2D1GNK9	Pseudomonas_phage	4.0e-166	47.4
AUL84697.1\|2057546_2057795_-	transcriptional regulator	A0A2D1GNH1	Pseudomonas_phage	1.3e-28	73.2
AUL84698.1\|2057962_2058547_+	hypothetical protein	A0A2D1GNR8	Pseudomonas_phage	4.2e-17	39.8
AUL84699.1\|2058823_2059078_+	hypothetical protein	H6WZJ6	Escherichia_phage	1.0e-36	98.8
AUL84700.1\|2058968_2059235_+	hypothetical protein	NA	NA	NA	NA
AUL84701.1\|2059555_2061493_+	sialate O-acetylesterase	A0A0P0ZBP4	Stx2-converting_phage	0.0e+00	96.7
AUL84702.1\|2061628_2061808_+	DUF1378 domain-containing protein	A0A0P0ZCJ7	Stx2-converting_phage	3.7e-25	100.0
AUL84703.1\|2061848_2062094_+	DUF826 domain-containing protein	A0A0P0ZGR2	Escherichia_phage	8.8e-17	100.0
AUL84704.1\|2062171_2062387_+\|holin	holin	A0A2R2Z340	Escherichia_phage	1.2e-33	100.0
AUL84705.1\|2062391_2062925_+	lysozyme	A0A1I9LJR4	Stx_converting_phage	1.3e-100	97.7
AUL84706.1\|2063199_2063769_+	hypothetical protein	A0A2R2Z339	Escherichia_phage	1.5e-104	99.5
AUL84707.1\|2063925_2064393_+\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	2.1e-67	87.7
AUL84708.1\|2064475_2064616_+	hypothetical protein	NA	NA	NA	NA
AUL84709.1\|2064856_2065171_+	PerC family transcriptional regulator	NA	NA	NA	NA
AUL84710.1\|2065237_2066450_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7
AUL84711.1\|2066858_2067101_-	hypothetical protein	NA	NA	NA	NA
AUL84712.1\|2067123_2067654_-	cytochrome b	A0A0U2QLA7	Escherichia_phage	1.6e-55	99.1

DBSCAN-SWA_6

2457414 : 2542109

101

Enterobacteria_phage(35.94%)

lysis,integrase,holin,portal,terminase,protease,transposase,tail,capsid

attL 2463439:2463454|attR 2523332:2523347

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL85088.1\|2457414_2458109_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL85089.1\|2458194_2458569_+	type III effector	A5LH48	Enterobacteria_phage	2.1e-54	83.1
AUL85090.1\|2458634_2459204_+	effector protein NleF	NA	NA	NA	NA
AUL85091.1\|2460370_2460649_-	secretion protein EspO	NA	NA	NA	NA
AUL85092.1\|2461037_2461223_+	hypothetical protein	NA	NA	NA	NA
AUL85093.1\|2461359_2462007_-	DUF1076 domain-containing protein	B6ETE1	Enterobacteria_phage	1.6e-41	41.1
AUL85094.1\|2462190_2462781_+	bfpT-regulated chaperone	NA	NA	NA	NA
2463439:2463454	attL	NA	NA	NA	NA
AUL87757.1\|2464514_2464943_+	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	1.4e-22	42.1
AUL87758.1\|2465548_2465767_-	hypothetical protein	NA	NA	NA	NA
AUL85095.1\|2466253_2467384_-\|integrase	integrase	O21940	Phage_21	1.7e-102	51.1
AUL85096.1\|2467361_2467610_-	excisionase	NA	NA	NA	NA
AUL85097.1\|2467674_2470119_-	exonuclease	V5UQJ3	Shigella_phage	8.4e-176	58.3
AUL85098.1\|2470211_2470400_-	DUF1482 domain-containing protein	NA	NA	NA	NA
AUL85099.1\|2470396_2470585_-	cell division inhibitor	NA	NA	NA	NA
AUL87760.1\|2470493_2470685_+	hypothetical protein	NA	NA	NA	NA
AUL87759.1\|2470838_2471147_+	hypothetical protein	NA	NA	NA	NA
AUL85100.1\|2471150_2471369_-	hypothetical protein	NA	NA	NA	NA
AUL85101.1\|2471398_2471569_-	hypothetical protein	NA	NA	NA	NA
AUL85102.1\|2471528_2471684_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	8.8e-07	51.1
AUL85103.1\|2471873_2472281_-	transcriptional regulator	I6PD69	Cronobacter_phage	7.2e-24	45.4
AUL85104.1\|2472358_2472586_+	transcriptional regulator	NA	NA	NA	NA
AUL85105.1\|2472569_2473121_+	hypothetical protein	NA	NA	NA	NA
AUL85106.1\|2473921_2474587_+	replication protein	A0A0U2JGJ0	Escherichia_phage	3.5e-84	97.4
AUL85107.1\|2474621_2475380_+	DUF1627 domain-containing protein	A0A088CE47	Shigella_phage	1.2e-80	68.4
AUL85108.1\|2475439_2475625_+	hypothetical protein	NA	NA	NA	NA
AUL85109.1\|2475972_2476521_+	hypothetical protein	A0A2R2Z302	Escherichia_phage	1.4e-41	75.4
AUL85110.1\|2476517_2476691_-	hypothetical protein	Q7Y2Q9	Escherichia_phage	3.1e-08	80.6
AUL85111.1\|2476735_2476948_+	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	2.5e-28	95.7
AUL85112.1\|2477050_2477368_-	transcriptional regulator	NA	NA	NA	NA
AUL85113.1\|2477360_2477732_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AUL85114.1\|2477955_2478183_+	hypothetical protein	NA	NA	NA	NA
AUL85115.1\|2478236_2478506_+	hypothetical protein	I6PCV7	Cronobacter_phage	2.7e-11	52.5
AUL85116.1\|2478507_2479557_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.4e-110	54.3
AUL85117.1\|2479569_2479944_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	4.2e-34	62.7
AUL85118.1\|2479940_2480762_+	antitermination protein	K7P7B9	Enterobacteria_phage	2.8e-83	61.9
AUL85119.1\|2480988_2481186_+	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	6.8e-28	96.9
AUL85120.1\|2481337_2482396_+	site-specific DNA-methyltransferase	S5MDR0	Escherichia_phage	2.6e-206	98.6
AUL85121.1\|2482990_2484937_+	sialate O-acetylesterase	A0A075M342	Escherichia_Stx1-converting_recombinant_phage	0.0e+00	98.3
AUL85122.1\|2485071_2485251_+	DUF1378 domain-containing protein	G9L6J3	Escherichia_phage	1.3e-25	100.0
AUL85123.1\|2485291_2485564_+	DUF826 domain-containing protein	A0A1I9LJR2	Stx_converting_phage	1.2e-22	100.0
AUL85124.1\|2485640_2485856_+\|holin	holin	Q6H9V8	Enterobacteria_phage	2.0e-33	100.0
AUL85125.1\|2485859_2486651_+	hypothetical protein	Q08JA0	Stx2-converting_phage	5.7e-33	85.5
AUL85126.1\|2487162_2487696_+	lysozyme	G9L6J6	Escherichia_phage	2.1e-100	96.6
AUL85127.1\|2487994_2488462_+\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	7.7e-78	100.0
AUL85128.1\|2488874_2489351_+	DUF1441 domain-containing protein	Q8VNN8	Enterobacteria_phage	3.3e-84	100.0
AUL85129.1\|2489347_2491471_+\|terminase	terminase	S5MDQ1	Escherichia_phage	0.0e+00	99.0
AUL85130.1\|2491443_2491680_+	hypothetical protein	S5MBY8	Escherichia_phage	4.5e-34	100.0
AUL85131.1\|2491679_2493182_+\|portal	phage portal protein	S5MW34	Escherichia_phage	3.1e-290	99.8
AUL87761.1\|2493195_2495151_+	peptidase S14	S5M7Q8	Escherichia_phage	0.0e+00	99.8
AUL85132.1\|2495238_2495565_+	DUF2190 domain-containing protein	Q9EYD5	Enterobacteria_phage	6.1e-50	100.0
AUL85133.1\|2495557_2495839_+	DNA breaking-rejoining protein	Q8VNN4	Enterobacteria_phage	3.9e-45	97.8
AUL85134.1\|2495841_2496465_+\|tail	phage tail protein	Q9EYD6	Enterobacteria_phage	2.5e-100	99.5
AUL85135.1\|2496477_2496876_+\|tail	phage tail protein	Q9EYD7	Enterobacteria_phage	5.9e-71	100.0
AUL85136.1\|2496883_2497636_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	5.8e-136	100.0
AUL85137.1\|2497649_2498072_+\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	3.3e-72	98.6
AUL85138.1\|2498098_2498407_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	3.0e-54	99.0
AUL85139.1\|2501091_2501421_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
AUL85140.1\|2501420_2502119_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	1.5e-130	98.3
AUL85141.1\|2502129_2502873_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	1.5e-147	97.6
AUL85142.1\|2502770_2503451_+\|tail	tail assembly protein	A0A0P0ZDX8	Stx2-converting_phage	9.7e-114	98.2
AUL85143.1\|2503686_2507163_+\|tail	phage tail protein	Q687E8	Enterobacteria_phage	0.0e+00	96.3
AUL85144.1\|2507229_2507829_+	Ail/Lom family protein	A0A0P0ZCF6	Stx2-converting_phage	5.9e-107	97.0
AUL85145.1\|2507893_2509207_+\|tail	phage tail protein	A0A0P0ZE15	Stx2-converting_phage	3.6e-80	97.9
AUL85146.1\|2509208_2509478_+\|tail	phage tail protein	Q6H9S8	Enterobacteria_phage	1.9e-44	98.9
AUL85147.1\|2509590_2510166_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	1.8e-89	88.9
AUL85148.1\|2510238_2510868_+	T3SS effector protein NleG8	B6DZB9	Enterobacteria_phage	4.6e-78	92.8
AUL85149.1\|2510949_2511591_+	DUF1076 domain-containing protein	B6DZC0	Enterobacteria_phage	6.8e-109	100.0
AUL85150.1\|2511621_2511756_+\|capsid	capsid protein	NA	NA	NA	NA
AUL85151.1\|2511752_2512001_-	DNA damage-inducible protein DinI	B6DZC1	Enterobacteria_phage	1.4e-38	100.0
AUL85152.1\|2512824_2512929_+	hypothetical protein	NA	NA	NA	NA
AUL85153.1\|2513118_2513331_+	type I toxin-antitoxin system hok family toxin	A0A0U2QV81	Escherichia_phage	6.8e-26	92.9
AUL85154.1\|2513498_2513777_+	hypothetical protein	I6PCV7	Cronobacter_phage	4.8e-11	46.9
AUL85155.1\|2513778_2514828_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.9e-108	53.4
AUL85156.1\|2514840_2515200_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	6.8e-34	61.1
AUL85157.1\|2515196_2515886_+	antiterminator	I6PDF8	Cronobacter_phage	2.7e-55	47.6
AUL87762.1\|2516098_2516296_+	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	6.8e-28	96.9
AUL85158.1\|2518270_2518537_+	hypothetical protein	NA	NA	NA	NA
AUL85159.1\|2518951_2520802_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	98.9
AUL85160.1\|2521240_2521456_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	7.7e-33	98.6
AUL85161.1\|2521944_2522412_+\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	1.8e-58	80.1
AUL85162.1\|2522494_2522635_+	hypothetical protein	NA	NA	NA	NA
AUL85163.1\|2522876_2523191_+	PerC family transcriptional regulator	NA	NA	NA	NA
AUL85164.1\|2523272_2523497_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.7e-20	92.5
2523332:2523347	attR	NA	NA	NA	NA
AUL85165.1\|2523538_2523904_+	HNH endonuclease	A0A0P0ZCH0	Stx2-converting_phage	2.0e-65	100.0
AUL85166.1\|2524192_2524663_+\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	1.3e-77	98.1
AUL85167.1\|2525835_2527284_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	8.4e-06	24.4
AUL85168.1\|2527296_2527476_+	chemotaxis protein	NA	NA	NA	NA
AUL87763.1\|2527513_2528437_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL85169.1\|2528653_2529997_+	DUF1338 domain-containing protein	NA	NA	NA	NA
AUL85170.1\|2530221_2531877_+	glucan biosynthesis protein D	NA	NA	NA	NA
AUL85171.1\|2531797_2532001_-	hypothetical protein	NA	NA	NA	NA
AUL85172.1\|2532016_2532241_+	hypothetical protein	NA	NA	NA	NA
AUL85173.1\|2532303_2532840_+	50S ribosomal protein L7/L12-serine acetyltransferase	NA	NA	NA	NA
AUL85174.1\|2532834_2533815_-	hypothetical protein	NA	NA	NA	NA
AUL85175.1\|2533938_2534931_+	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA
AUL85176.1\|2534927_2535521_+	tellurite resistance methyltransferase TehB	NA	NA	NA	NA
AUL85177.1\|2535823_2536492_+	hypothetical protein	NA	NA	NA	NA
AUL85178.1\|2537023_2538232_+\|transposase	transposase	A0A077SL42	Escherichia_phage	3.2e-208	93.5
AUL85179.1\|2538271_2539486_-	BenE family transporter YdcO	NA	NA	NA	NA
AUL85180.1\|2539538_2540075_+	XRE family transcriptional regulator	NA	NA	NA	NA
AUL85181.1\|2540147_2542109_+\|protease	collagenase-like protease	Q6DW11	Phage_TP	9.2e-24	28.9

DBSCAN-SWA_7

2646292 : 2703388

Stx2-converting_phage(46.88%)

head,lysis,transposase,tail,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL85268.1\|2646292_2647429_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
AUL85269.1\|2648197_2649394_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL85270.1\|2649388_2649631_-	hypothetical protein	NA	NA	NA	NA
AUL85271.1\|2653443_2655102_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	8.3e-26	25.2
AUL85272.1\|2655681_2656376_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL85273.1\|2656600_2656813_-	hypothetical protein	NA	NA	NA	NA
AUL85274.1\|2656888_2657506_-	glutathione S-transferase family protein	NA	NA	NA	NA
AUL85275.1\|2657772_2659272_+	L-asparagine permease	NA	NA	NA	NA
AUL85276.1\|2659386_2660448_-	hypothetical protein	NA	NA	NA	NA
AUL85277.1\|2660530_2660656_+	tonB-dependent receptor yncD	NA	NA	NA	NA
AUL87767.1\|2660595_2660775_-	hypothetical protein	NA	NA	NA	NA
AUL85278.1\|2660689_2662792_+	TonB-dependent siderophore receptor	A0A1B0VCF0	Salmonella_phage	1.1e-134	65.6
AUL85279.1\|2662827_2663493_-	colanic acid/biofilm transcriptional regulator	NA	NA	NA	NA
AUL85280.1\|2664032_2664727_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL85281.1\|2664792_2665263_+	hypothetical protein	NA	NA	NA	NA
AUL85282.1\|2665306_2667352_-	peptidyl-dipeptidase Dcp	NA	NA	NA	NA
AUL87768.1\|2667258_2667477_+	hypothetical protein	NA	NA	NA	NA
AUL85283.1\|2667488_2668235_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AUL85284.1\|2668323_2669010_+	transcriptional regulator	NA	NA	NA	NA
AUL85285.1\|2669187_2669391_+	selenoprotein YdfZ	J9Q802	Salmonella_phage	1.6e-11	55.2
AUL87769.1\|2671660_2672032_+	DUF1076 domain-containing protein	A0A0P0ZBX1	Stx2-converting_phage	1.7e-67	99.2
AUL85286.1\|2672256_2673132_-	secretion protein EspS	A0A0P0ZCT1	Stx2-converting_phage	2.1e-161	99.3
AUL85287.1\|2673272_2673542_-\|tail	phage tail protein	Q6H9S8	Enterobacteria_phage	1.1e-44	98.9
AUL85288.1\|2673543_2674857_-\|tail	phage tail protein	H6WZM9	Escherichia_phage	4.8e-77	97.9
AUL85289.1\|2674921_2675521_-	Ail/Lom family protein	H6WZM8	Escherichia_phage	4.2e-105	94.0
AUL85290.1\|2675587_2678980_-\|tail	phage tail protein	A0A0P0ZDT4	Stx2-converting_phage	0.0e+00	88.0
AUL85291.1\|2679113_2679641_+	superoxide dismutase	Q9MC02	Salmonella_phage	1.8e-59	60.5
AUL85292.1\|2679671_2679875_-	hypothetical protein	NA	NA	NA	NA
AUL85293.1\|2679828_2680509_-\|tail	tail assembly protein	Q6H9T3	Enterobacteria_phage	2.3e-107	91.2
AUL85294.1\|2680406_2681150_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	6.8e-145	97.2
AUL85295.1\|2681160_2681859_-\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	8.4e-129	96.6
AUL85296.1\|2681858_2682200_-\|tail	phage tail protein	A0A0P0ZCS8	Stx2-converting_phage	8.7e-63	100.0
AUL85297.1\|2685482_2685764_-\|tail	phage tail protein	A0A0P0ZDE6	Stx2-converting_phage	1.3e-45	100.0
AUL85298.1\|2685787_2686162_-\|tail	phage tail protein	A0A0N7KZA2	Stx2-converting_phage	7.8e-65	100.0
AUL85299.1\|2686167_2686884_-\|tail	phage tail protein	A0A0P0ZD29	Stx2-converting_phage	2.8e-127	98.7
AUL85300.1\|2686942_2687287_-	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
AUL85301.1\|2687283_2687730_-	hypothetical protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
AUL85302.1\|2687726_2688077_-\|head,tail	head-tail adaptor protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
AUL85303.1\|2688086_2688413_-\|head,tail	phage gp6-like head-tail connector protein	B6ETF0	Enterobacteria_phage	7.0e-54	100.0
AUL85304.1\|2690939_2691161_-	hypothetical protein	H6WZL1	Escherichia_phage	3.4e-36	100.0
AUL85305.1\|2691205_2693143_-\|capsid	phage major capsid protein	H6WZL0	Escherichia_phage	0.0e+00	99.8
AUL85306.1\|2694163_2694529_-	HNH endonuclease	A0A0P0ZCH0	Stx2-converting_phage	2.0e-65	100.0
AUL85307.1\|2694570_2694798_+	DUF3950 domain-containing protein	A0A0P0ZCA1	Stx2-converting_phage	3.9e-35	100.0
AUL85308.1\|2695166_2695391_-	hypothetical protein	NA	NA	NA	NA
AUL85309.1\|2695387_2695882_-\|lysis	lysis protein	Q9ZXB6	Enterobacteria_phage	4.0e-77	93.8
AUL85310.1\|2695883_2696102_-	hypothetical protein	Q687G2	Enterobacteria_phage	1.0e-16	93.3
AUL85311.1\|2696179_2696713_-	lysozyme	A0A0N7KZF9	Stx2-converting_phage	2.8e-100	98.3
AUL85312.1\|2696763_2697108_-	DUF1327 domain-containing protein	A0A0P0ZD64	Stx2-converting_phage	1.0e-58	100.0
AUL85313.1\|2697765_2699616_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	98.5
AUL85314.1\|2699664_2699793_-	hypothetical protein	NA	NA	NA	NA
AUL85315.1\|2699937_2700204_-	hypothetical protein	NA	NA	NA	NA
AUL85316.1\|2701729_2701942_-	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	1.3e-16	72.9
AUL85317.1\|2702019_2703388_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	6.3e-112	99.5

DBSCAN-SWA_8

2751060 : 2802406

Escherichia_phage(42.11%)

lysis,tRNA,integrase,holin,portal,terminase,tail

attL 2751695:2751720|attR 2797044:2797069

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL85352.1\|2751060_2751495_+	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	4.0e-28	52.1
2751695:2751720	attL	NA	NA	NA	NA
AUL85353.1\|2752075_2752717_-	DUF1076 domain-containing protein	B6DZC0	Enterobacteria_phage	6.8e-109	100.0
AUL85354.1\|2752798_2753428_-	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	1.3e-77	92.2
AUL85355.1\|2753500_2754076_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	5.3e-89	88.4
AUL85356.1\|2754188_2754458_-\|tail	phage tail protein	Q6H9S8	Enterobacteria_phage	2.4e-44	97.8
AUL85357.1\|2754459_2755782_-\|tail	phage tail protein	Q687E6	Enterobacteria_phage	2.0e-75	98.6
AUL85358.1\|2755846_2756446_-	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	2.6e-110	100.0
AUL85359.1\|2756513_2759987_-\|tail	phage tail protein	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	89.9
AUL85360.1\|2760227_2760905_-\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	2.6e-111	92.9
AUL85361.1\|2760802_2761546_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	2.8e-146	97.2
AUL85362.1\|2761551_2762250_-\|tail	phage minor tail protein L	Q6H9T5	Enterobacteria_phage	5.8e-130	97.4
AUL85363.1\|2762249_2762579_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
AUL85364.1\|2762575_2765221_-\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	95.7
AUL85365.1\|2765264_2765573_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	3.0e-54	99.0
AUL85366.1\|2765599_2766022_-\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	3.3e-72	98.6
AUL85367.1\|2766035_2766788_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	5.8e-136	100.0
AUL85368.1\|2766795_2767194_-\|tail	phage tail protein	Q9EYD7	Enterobacteria_phage	5.9e-71	100.0
AUL85369.1\|2767206_2767830_-\|tail	phage tail protein	Q8VNN3	Enterobacteria_phage	2.9e-104	98.6
AUL85370.1\|2767832_2768114_-	DNA breaking-rejoining protein	Q8VNN4	Enterobacteria_phage	1.3e-45	98.9
AUL85371.1\|2768106_2768433_-	DUF2190 domain-containing protein	Q9EYD5	Enterobacteria_phage	6.1e-50	100.0
AUL87771.1\|2768520_2770476_-	peptidase S14	S5M7Q8	Escherichia_phage	0.0e+00	99.7
AUL85372.1\|2770489_2771992_-\|portal	phage portal protein	Q9EYD2	Enterobacteria_phage	4.8e-291	100.0
AUL85373.1\|2771991_2772228_-	hypothetical protein	S5MBY8	Escherichia_phage	4.5e-34	100.0
AUL85374.1\|2772200_2774324_-\|terminase	terminase	Q9EYD1	Enterobacteria_phage	0.0e+00	100.0
AUL85375.1\|2774320_2774797_-	DUF1441 domain-containing protein	Q9EYD0	Enterobacteria_phage	2.1e-83	100.0
AUL85376.1\|2774853_2775102_+	hypothetical protein	NA	NA	NA	NA
AUL85377.1\|2775251_2775719_-\|lysis	lysis protein	Q9EYC9	Enterobacteria_phage	1.2e-78	100.0
AUL85378.1\|2775872_2776442_-	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
AUL85379.1\|2776712_2777246_-	lysozyme	A0A1I9LJR4	Stx_converting_phage	1.8e-102	100.0
AUL85380.1\|2777250_2777466_-\|holin	holin	A0A0P0ZFW5	Escherichia_phage	9.0e-34	100.0
AUL85381.1\|2777543_2777789_-	DUF826 domain-containing protein	A0A0P0ZGR2	Escherichia_phage	8.8e-17	100.0
AUL85382.1\|2777829_2778009_-	DUF1378 domain-containing protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
AUL85383.1\|2778145_2780092_-	sialate O-acetylesterase	A0A075M342	Escherichia_Stx1-converting_recombinant_phage	0.0e+00	98.6
AUL85384.1\|2780793_2781336_-	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	3.9e-73	72.3
AUL85385.1\|2781332_2781623_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	8.2e-46	87.5
AUL85386.1\|2781622_2782222_-	DUF1367 domain-containing protein	A0A0U2RT94	Escherichia_phage	1.0e-106	92.5
AUL85387.1\|2782293_2782545_-	hypothetical protein	NA	NA	NA	NA
AUL85388.1\|2782618_2782807_+	hypothetical protein	NA	NA	NA	NA
AUL85389.1\|2782781_2782994_-	type I toxin-antitoxin system hok family toxin	A0A0U2QV81	Escherichia_phage	1.2e-17	70.0
AUL85390.1\|2783116_2784238_-	DNA-binding protein	NA	NA	NA	NA
AUL85391.1\|2784224_2784875_-	hypothetical protein	NA	NA	NA	NA
AUL85392.1\|2785029_2785260_-	hypothetical protein	A0A2R2Z315	Escherichia_phage	4.1e-16	76.8
AUL85393.1\|2785256_2785679_-	DUF977 domain-containing protein	A0A0U2QQN3	Escherichia_phage	2.8e-63	90.6
AUL85394.1\|2785694_2786507_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	8.5e-117	87.7
AUL85395.1\|2786478_2787225_-	DNA replication protein DnaC	V5UQI5	Shigella_phage	4.8e-114	80.9
AUL85396.1\|2787231_2788020_-	hypothetical protein	G9L6A8	Escherichia_phage	5.1e-42	65.0
AUL85397.1\|2788097_2788520_-	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	5.9e-69	93.6
AUL85398.1\|2788516_2788759_-	XRE family transcriptional regulator	K7PKH4	Enterobacteria_phage	2.3e-17	62.1
AUL85399.1\|2788855_2789275_+	transcriptional regulator	K7PH71	Enterobacterial_phage	3.1e-14	60.6
AUL85400.1\|2789581_2789734_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	1.0e-07	55.3
AUL85401.1\|2789739_2789940_-	hypothetical protein	NA	NA	NA	NA
AUL85402.1\|2790145_2790994_+	transcriptional regulator	A0A0P0ZE80	Stx2-converting_phage	5.9e-60	60.8
AUL85403.1\|2791040_2791262_+	cell division protein FtsZ	A0A0U2RTC4	Escherichia_phage	6.9e-37	97.3
AUL87772.1\|2791261_2791432_+	hypothetical protein	A0A0U2SHB5	Escherichia_phage	3.3e-23	89.3
AUL85404.1\|2791512_2794182_+	exonuclease VIII	A0A0U2I1R6	Escherichia_phage	4.2e-205	61.3
AUL85405.1\|2794174_2794984_+	recombination and repair protein RecT	A0A1P8DTF2	Proteus_phage	8.8e-106	71.5
AUL87773.1\|2795040_2795235_+	restriction alleviation and modification enhancement protein	A0A0U2QQP4	Escherichia_phage	7.6e-32	96.9
AUL85406.1\|2795227_2795416_+	hypothetical protein	A0A0U2QL97	Escherichia_phage	1.6e-18	97.9
AUL85407.1\|2795515_2795731_+	hypothetical protein	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
AUL85408.1\|2795732_2796968_+\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	4.3e-237	98.0
AUL85409.1\|2797019_2797955_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	1.2e-146	99.2
2797044:2797069	attR	NA	NA	NA	NA
AUL85410.1\|2798083_2799457_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.5e-52	32.9
AUL85411.1\|2799486_2799660_-	hypothetical protein	NA	NA	NA	NA
AUL85412.1\|2799935_2800919_-	zinc transporter ZntB	NA	NA	NA	NA
AUL87774.1\|2801173_2802406_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	4.0e-17	39.5

DBSCAN-SWA_9

2973226 : 3137666

198

Enterobacteria_phage(25.0%)

head,lysis,tRNA,integrase,holin,terminase,protease,transposase,tail,capsid

attL 3123602:3123622|attR 3147750:3147770

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL85563.1\|2973226_2973920_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL87783.1\|2974084_2974996_+	hemolysin HlyE	NA	NA	NA	NA
AUL85564.1\|2975202_2975664_-	YcgN family cysteine cluster protein	NA	NA	NA	NA
AUL85565.1\|2975740_2976400_-	isomerase/hydrolase	NA	NA	NA	NA
AUL85566.1\|2976471_2976765_-	hypothetical protein	NA	NA	NA	NA
AUL85567.1\|2977006_2977408_+	inhibitor of g-type lysozyme	NA	NA	NA	NA
AUL85568.1\|2977527_2977896_-	hypothetical protein	NA	NA	NA	NA
AUL85569.1\|2978051_2978279_-	hypothetical protein	NA	NA	NA	NA
AUL85570.1\|2978418_2979114_+	septum site-determining protein MinC	NA	NA	NA	NA
AUL85571.1\|2979137_2979950_+	septum site-determining protein MinD	NA	NA	NA	NA
AUL85572.1\|2979953_2980220_+	cell division topological specificity factor	NA	NA	NA	NA
AUL85573.1\|2981049_2981235_-	hypothetical protein	NA	NA	NA	NA
AUL85574.1\|2981335_2981509_+	hypothetical protein	NA	NA	NA	NA
AUL85575.1\|2981510_2981855_+	glycine zipper family protein	NA	NA	NA	NA
AUL85576.1\|2981864_2982194_+	hypothetical protein	NA	NA	NA	NA
AUL87784.1\|2982250_2984572_-	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV18	Escherichia_phage	1.8e-90	43.3
AUL87785.1\|2985150_2985294_+	hypothetical protein	NA	NA	NA	NA
AUL85577.1\|2985298_2985517_-	hypothetical protein	NA	NA	NA	NA
AUL85578.1\|2987501_2987750_-	hypothetical protein	NA	NA	NA	NA
AUL85579.1\|2987862_2988129_-	RcsB connector protein for regulation of biofilm and acid-resistance	NA	NA	NA	NA
AUL85580.1\|2988157_2988430_-	two-component-system connector protein YmgA	NA	NA	NA	NA
AUL85581.1\|2988472_2988709_-	two-component-system connector protein YcgZ	NA	NA	NA	NA
AUL85582.1\|2989022_2990234_+	diguanylate phosphodiesterase	NA	NA	NA	NA
AUL85583.1\|2990438_2991170_+	helix-turn-helix-type transcriptional regulator	Q9EYF2	Enterobacteria_phage	2.7e-53	50.5
AUL85584.1\|2991390_2991795_+	DUF1398 domain-containing protein	NA	NA	NA	NA
AUL85585.1\|2992490_2992811_+	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	1.1e-38	64.7
AUL85586.1\|2992878_2993031_-	isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-21	100.0
AUL87786.1\|2993510_2993948_+	acetyltransferase	NA	NA	NA	NA
AUL85587.1\|2994204_2994558_-	XRE family transcriptional regulator	NA	NA	NA	NA
AUL85588.1\|2994840_2995221_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
AUL85589.1\|2995217_2995565_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
AUL85590.1\|2997167_2997377_-	hypothetical protein	NA	NA	NA	NA
AUL85591.1\|2997511_2998465_+\|protease	outer membrane protease PgtE	NA	NA	NA	NA
AUL85592.1\|2998651_3000136_+	alpha/beta hydrolase	NA	NA	NA	NA
AUL85593.1\|3000319_3000625_-\|tail	phage tail protein	K7PMH7	Enterobacteria_phage	2.8e-12	76.5
AUL87787.1\|3000723_3001350_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AUL85594.1\|3001847_3002030_+	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA
AUL85595.1\|3002108_3002609_+	ferritin-like domain-containing protein	NA	NA	NA	NA
AUL85596.1\|3002645_3003152_+	ferritin-like domain-containing protein	NA	NA	NA	NA
AUL85597.1\|3003170_3004061_+	Mn-containing catalase	NA	NA	NA	NA
AUL85598.1\|3004180_3004762_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.5e-102	94.8
AUL85599.1\|3004761_3007833_-\|tail	phage tail protein	U5N099	Enterobacteria_phage	1.9e-68	82.1
AUL85600.1\|3007897_3008419_-\|tail	phage tail tape measure protein	A0A291AWV3	Escherichia_phage	2.2e-41	100.0
AUL85601.1\|3009868_3010075_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
AUL85602.1\|3010071_3011997_-\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.4
AUL85603.1\|3011971_3012517_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	3.1e-94	98.3
AUL85604.1\|3012905_3013100_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	3.7e-26	96.9
AUL85605.1\|3013264_3013471_-	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	5.8e-30	100.0
AUL85606.1\|3013756_3014167_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	2.7e-71	98.5
AUL85607.1\|3014458_3014752_+	lipoprotein bor	K7PL54	Enterobacteria_phage	1.5e-47	99.0
AUL85608.1\|3014783_3015245_-\|lysis	lysis protein	A0A0K2FJD0	Enterobacteria_phage	1.9e-76	100.0
AUL85609.1\|3015241_3015718_-	lysozyme	K7PKV2	Enterobacteria_phage	1.0e-85	96.8
AUL85610.1\|3015704_3016022_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	3.3e-40	86.1
AUL87788.1\|3016331_3016877_-	antiterminator	I6PDF8	Cronobacter_phage	3.4e-45	49.7
AUL85611.1\|3017150_3017387_+	excisionase	NA	NA	NA	NA
AUL85612.1\|3017376_3018519_+\|integrase	integrase	Q77Z02	Phage_21	1.2e-204	99.4
AUL85613.1\|3018632_3019883_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.9e-22	98.1
AUL85614.1\|3020054_3020708_+	23S rRNA pseudouridine synthase E	NA	NA	NA	NA
AUL85615.1\|3020717_3021179_+	NUDIX hydrolase	NA	NA	NA	NA
AUL85616.1\|3021232_3022339_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
AUL87789.1\|3022374_3023016_+	lysogenization protein HflD	NA	NA	NA	NA
AUL85617.1\|3023019_3024390_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.2e-108	44.9
AUL85618.1\|3024558_3025230_+	two-component system response regulator PhoP	NA	NA	NA	NA
AUL85619.1\|3025229_3026690_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
AUL85620.1\|3026765_3027887_+	50S ribosomal protein L16 arginine hydroxylase	NA	NA	NA	NA
AUL85621.1\|3027935_3029162_-	peptidase T	NA	NA	NA	NA
AUL85622.1\|3029217_3029433_+	hypothetical protein	NA	NA	NA	NA
AUL85623.1\|3029411_3030548_+	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	9.4e-29	39.8
AUL85624.1\|3030531_3031395_+	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	2.0e-10	28.2
AUL85625.1\|3032441_3033092_+	DUF1076 domain-containing protein	B6DZZ5	Stx2-converting_phage	2.8e-25	37.2
AUL85626.1\|3033166_3034225_+	type III effector	NA	NA	NA	NA
AUL85627.1\|3034352_3034988_-	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	3.7e-75	92.0
AUL85628.1\|3035055_3035637_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	2.7e-48	54.8
AUL85629.1\|3035748_3036018_-\|tail	phage tail protein	Q687E5	Enterobacteria_phage	6.4e-45	100.0
AUL85630.1\|3036019_3037333_-\|tail	phage tail protein	A0A0P0ZD68	Stx2-converting_phage	7.4e-78	98.9
AUL87790.1\|3037397_3038021_-	hypothetical protein	A0A1U8QHD6	Enterobacteria_phage	8.7e-69	60.9
AUL85631.1\|3038089_3041569_-\|tail	phage tail protein	B6DZB5	Enterobacteria_phage	0.0e+00	94.5
AUL85632.1\|3041804_3042485_-\|tail	phage tail protein	Q9EYE5	Enterobacteria_phage	1.0e-107	90.6
AUL85633.1\|3042382_3043126_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	7.3e-147	98.4
AUL85634.1\|3043136_3043835_-\|tail	phage minor tail protein L	B6DZB1	Enterobacteria_phage	1.7e-129	96.6
AUL85635.1\|3043834_3044176_-\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	6.4e-58	93.8
AUL85636.1\|3047453_3047735_-	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	2.3e-45	98.9
AUL87791.1\|3047758_3048154_-\|tail	phage tail protein	A0A0P0ZE84	Stx2-converting_phage	7.7e-63	97.6
AUL85637.1\|3048918_3049263_-	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
AUL85638.1\|3049259_3049706_-	hypothetical protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
AUL85639.1\|3049702_3050053_-\|head,tail	head-tail adaptor protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
AUL85640.1\|3050063_3050390_-\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDE0	Stx2-converting_phage	2.0e-53	99.1
AUL85641.1\|3052914_3053136_-	hypothetical protein	A0A0P0ZD92	Stx2-converting_phage	2.9e-35	98.6
AUL85642.1\|3053180_3055118_-\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	99.8
AUL85643.1\|3055181_3056843_-\|terminase	terminase	A0A0N7KZG0	Stx2-converting_phage	0.0e+00	99.5
AUL85644.1\|3056839_3057403_-\|terminase	terminase small subunit	A0A0P0ZD56	Stx2-converting_phage	1.1e-89	100.0
AUL85645.1\|3057693_3058059_-	HNH endonuclease	B6ETE5	Enterobacteria_phage	7.8e-62	95.0
AUL85646.1\|3058100_3058286_+	DUF3950 domain-containing protein	H6WZK6	Escherichia_phage	6.4e-20	88.5
AUL85647.1\|3058415_3058556_-	hypothetical protein	NA	NA	NA	NA
AUL87792.1\|3058697_3058916_-	hypothetical protein	Q9T1L1	Enterobacteria_phage	6.4e-11	73.3
AUL85648.1\|3058912_3059137_-	hypothetical protein	NA	NA	NA	NA
AUL87793.1\|3059160_3059628_-\|lysis	lysis protein	A0A0H4IT10	Shigella_phage	7.2e-68	87.1
AUL85649.1\|3059785_3059977_-	hypothetical protein	A0A0M4S639	Salmonella_phage	7.8e-05	63.9
AUL85650.1\|3060054_3060588_-	lysozyme	A0A1U9AJ98	Stx1_converting_phage	2.1e-100	95.5
AUL85651.1\|3060620_3060815_-	hypothetical protein	NA	NA	NA	NA
AUL85652.1\|3060783_3061020_+	hypothetical protein	NA	NA	NA	NA
AUL85653.1\|3060968_3061313_+	hypothetical protein	NA	NA	NA	NA
AUL85654.1\|3061275_3061491_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	1.7e-32	97.2
AUL85655.1\|3061772_3063623_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	99.0
AUL85656.1\|3064036_3064303_-	hypothetical protein	NA	NA	NA	NA
AUL85657.1\|3064193_3064625_-	tellurite resistance protein	H6WZJ6	Escherichia_phage	3.6e-66	96.5
AUL85658.1\|3064803_3065025_-	hypothetical protein	K7PJU3	Enterobacteria_phage	2.0e-20	65.2
AUL85659.1\|3065077_3065302_-	hypothetical protein	NA	NA	NA	NA
AUL85660.1\|3065681_3066740_-	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	1.2e-192	91.5
AUL85661.1\|3066890_3067088_-	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	4.0e-28	98.5
AUL85662.1\|3067306_3067990_-	antiterminator	I6PDF8	Cronobacter_phage	1.2e-55	48.9
AUL85663.1\|3067986_3068346_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.7e-37	65.8
AUL85664.1\|3068358_3069408_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.5e-110	54.9
AUL85665.1\|3069409_3069688_-	hypothetical protein	I6PCV7	Cronobacter_phage	6.3e-11	48.4
AUL87794.1\|3069628_3069826_+	hypothetical protein	NA	NA	NA	NA
AUL85666.1\|3069803_3070289_-	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
AUL85667.1\|3070307_3070487_-	hypothetical protein	NA	NA	NA	NA
AUL85668.1\|3070818_3071163_-	hypothetical protein	A0A2R2Z2X8	Escherichia_phage	9.7e-54	92.1
AUL85669.1\|3071166_3071454_-	hypothetical protein	A0A1I9LJM1	Stx_converting_phage	2.5e-47	95.8
AUL85670.1\|3071456_3071816_-	hypothetical protein	A0A076GCN9	Escherichia_phage	1.3e-37	78.6
AUL85671.1\|3071981_3072164_-	hypothetical protein	A0A2R2Z308	Escherichia_phage	1.0e-25	95.0
AUL85672.1\|3072311_3072617_-	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	1.5e-50	95.0
AUL85673.1\|3072613_3072931_-	DNA-binding protein	A0A222YXX1	Escherichia_phage	3.0e-33	71.6
AUL85674.1\|3072927_3073644_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.0e-73	63.4
AUL85675.1\|3073665_3074412_-	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	8.1e-114	83.2
AUL87795.1\|3074418_3075387_-	DNA-binding protein	U5P0A0	Shigella_phage	9.0e-73	52.4
AUL85676.1\|3075409_3075835_-	Rha family transcriptional regulator	NA	NA	NA	NA
AUL85677.1\|3075831_3076059_-	cell division protein	NA	NA	NA	NA
AUL85678.1\|3076155_3076803_+	helix-turn-helix domain-containing protein	A0A1P8DTH0	Proteus_phage	4.7e-09	25.9
AUL85679.1\|3077076_3077229_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	6.0e-08	55.3
AUL85680.1\|3077618_3077807_+	cell division inhibitor	NA	NA	NA	NA
AUL85681.1\|3077803_3077992_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AUL85682.1\|3078084_3080628_+	exonuclease	V5UQJ3	Shigella_phage	7.1e-234	69.8
AUL87796.1\|3080689_3080959_+	excisionase	NA	NA	NA	NA
AUL85683.1\|3080927_3082046_+\|integrase	integrase	Q77Z04	Phage_21	3.5e-84	44.7
AUL85684.1\|3082122_3082590_-	DUF2335 domain-containing protein	A0A1B0YZW3	Pseudomonas_phage	4.4e-09	35.0
AUL85685.1\|3082567_3082771_-	hypothetical protein	NA	NA	NA	NA
AUL85686.1\|3083119_3083332_+	hypothetical protein	NA	NA	NA	NA
AUL85687.1\|3083452_3084814_+	type III secretion protein GogB	Q9MBM1	Phage_Gifsy-1	1.4e-50	29.2
AUL85688.1\|3084874_3085150_+	secretion protein EspO	NA	NA	NA	NA
AUL85689.1\|3085229_3085355_-	NleB	Q8HAB2	Salmonella_phage	8.7e-05	58.3
AUL85690.1\|3085377_3085965_-	hypothetical protein	NA	NA	NA	NA
AUL85691.1\|3087545_3088239_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL85692.1\|3088236_3090297_-	type III effector	A0A0N7KZG3	Stx2-converting_phage	2.8e-63	29.1
AUL85693.1\|3090887_3093236_-	type III secretion system effector HECT-type E3 ubiquitin transferase	NA	NA	NA	NA
AUL85694.1\|3093451_3093721_-\|tail	phage tail protein	A0A2R2Z347	Escherichia_phage	2.4e-44	98.9
AUL85695.1\|3093722_3095036_-\|tail	phage tail protein	A0A0P0ZD68	Stx2-converting_phage	2.0e-78	99.1
AUL85696.1\|3095100_3095700_-	Ail/Lom family protein	A0A0P0ZBV0	Stx2-converting_phage	2.0e-110	99.0
AUL85697.1\|3095766_3099243_-\|tail	phage tail protein	Q687E8	Enterobacteria_phage	0.0e+00	96.4
AUL85698.1\|3099489_3100170_-\|tail	phage tail protein	Q9EYE5	Enterobacteria_phage	2.3e-107	90.2
AUL85699.1\|3100067_3100811_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	9.2e-150	99.6
AUL85700.1\|3100821_3101520_-\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	1.7e-129	97.0
AUL85701.1\|3101519_3101861_-\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	2.0e-59	96.5
AUL85702.1\|3105138_3105420_-	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	2.3e-45	98.9
AUL85703.1\|3105443_3105806_-\|tail	phage tail protein	A0A0P0ZE84	Stx2-converting_phage	4.6e-62	98.3
AUL85704.1\|3106599_3106944_-	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
AUL85705.1\|3106940_3107387_-	hypothetical protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
AUL85706.1\|3107307_3107733_-\|head,tail	head-tail adaptor protein	A0A0P0ZB28	Stx2-converting_phage	2.8e-58	99.1
AUL85707.1\|3107743_3108070_-\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDE0	Stx2-converting_phage	2.0e-53	99.1
AUL85708.1\|3110425_3110647_-	hypothetical protein	H6WZL1	Escherichia_phage	3.4e-36	100.0
AUL85709.1\|3110691_3112629_-\|capsid	phage major capsid protein	B6ETE8	Enterobacteria_phage	0.0e+00	99.2
AUL85710.1\|3112692_3114354_-\|terminase	terminase large subunit	A0A0P0ZEI4	Stx2-converting_phage	0.0e+00	100.0
AUL85711.1\|3114350_3114914_-\|terminase	terminase small subunit	A0A0N7KZJ8	Stx2-converting_phage	8.1e-90	100.0
AUL85712.1\|3115029_3115209_-	hypothetical protein	H6WZK7	Escherichia_phage	8.6e-22	91.1
AUL85713.1\|3115205_3115571_-	HNH endonuclease	B6ETE5	Enterobacteria_phage	3.1e-66	100.0
AUL85714.1\|3115612_3115840_+	DUF3950 domain-containing protein	A0A0P0ZE23	Stx2-converting_phage	1.7e-35	100.0
AUL85715.1\|3116207_3116675_-\|lysis	lysis protein	A0A0P0ZDL0	Stx2-converting_phage	9.0e-79	100.0
AUL85716.1\|3116828_3117380_-	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	2.3e-97	96.3
AUL85717.1\|3117650_3118184_-	lysozyme	A0A0N7KZF9	Stx2-converting_phage	4.3e-101	99.4
AUL87797.1\|3118234_3118579_-	DUF1327 domain-containing protein	A0A0P0ZD64	Stx2-converting_phage	1.0e-58	100.0
AUL85718.1\|3118583_3118799_-\|holin	holin	Q6H9V8	Enterobacteria_phage	1.7e-32	97.2
AUL85719.1\|3119233_3121084_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	98.7
AUL85720.1\|3121497_3121764_-	hypothetical protein	NA	NA	NA	NA
AUL85721.1\|3121654_3122086_-	tellurite resistance protein	H6WZJ6	Escherichia_phage	3.6e-66	96.5
AUL85722.1\|3122651_3123473_-	antitermination protein	K7P7B9	Enterobacteria_phage	4.1e-82	61.2
AUL85723.1\|3123469_3123844_-	hypothetical protein	V5URS4	Shigella_phage	1.3e-32	62.7
3123602:3123622	attL	NA	NA	NA	NA
AUL85724.1\|3123856_3124906_-	hypothetical protein	U5P0K4	Shigella_phage	7.7e-110	54.3
AUL85725.1\|3124907_3125180_-	hypothetical protein	S4TNP0	Salmonella_phage	1.1e-12	53.0
AUL85726.1\|3125301_3125646_-	TIGR00156 family protein	A0A1I9LJU6	Stx_converting_phage	6.1e-56	99.1
AUL85727.1\|3125765_3125978_-	hypothetical protein	A0A0P0ZAX5	Stx2-converting_phage	8.6e-29	98.6
AUL85728.1\|3126211_3126769_-	DUF551 domain-containing protein	A0A0N7KZV3	Escherichia_phage	2.8e-34	41.7
AUL85729.1\|3126770_3126989_-	sugar acetyltransferase inhibitor	A0A2R2Z311	Escherichia_phage	3.1e-21	70.8
AUL85730.1\|3127116_3127428_-	hypothetical protein	A0A0U2QV73	Escherichia_phage	7.2e-56	92.2
AUL85731.1\|3127420_3127648_-	hypothetical protein	A0A1B5FPG2	Escherichia_phage	5.1e-11	49.3
AUL87798.1\|3127644_3127926_-	DNA-binding protein	A0A222YXX1	Escherichia_phage	3.6e-30	73.6
AUL85732.1\|3127958_3128675_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.6e-71	63.0
AUL85733.1\|3128696_3129443_-	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	1.4e-113	83.8
AUL85734.1\|3129449_3130520_-	phage replisome organizer	A0A088CD36	Shigella_phage	4.5e-65	66.2
AUL85735.1\|3130591_3131017_-	Rha family transcriptional regulator	NA	NA	NA	NA
AUL85736.1\|3131000_3131324_-	transcriptional regulator	A0A0R6PH31	Moraxella_phage	6.2e-10	44.9
AUL85737.1\|3131448_3131925_+	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	5.7e-12	53.4
AUL85738.1\|3132243_3132396_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	8.7e-07	51.1
AUL85739.1\|3132885_3133074_+	cell division inhibition protein DicB	NA	NA	NA	NA
AUL85740.1\|3133070_3133262_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AUL85741.1\|3133355_3135827_+	exonuclease	K7PLW7	Enterobacteria_phage	8.5e-59	60.3
AUL85742.1\|3135888_3136158_+	excisionase	NA	NA	NA	NA
AUL85743.1\|3136126_3137245_+\|integrase	integrase	Q77Z04	Phage_21	2.9e-83	44.2
AUL85744.1\|3137321_3137666_-	DUF2335 domain-containing protein	A0A1B0YZW3	Pseudomonas_phage	4.3e-09	35.5
3147750:3147770	attR	NA	NA	NA	NA

DBSCAN-SWA_10

3281715 : 3309289

Escherichia_phage(30.43%)

lysis,integrase,holin,terminase,protease,transposase,tail

attL 3297511:3297526|attR 3315007:3315022

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL85883.1\|3281715_3281985_-\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	7.8e-43	95.5
AUL87807.1\|3283364_3283988_-	hypothetical protein	A0A1U8QHD6	Enterobacteria_phage	1.3e-69	61.4
AUL87808.1\|3284056_3285739_-\|tail	phage tail protein	Q6H9T2	Enterobacteria_phage	7.0e-307	98.8
AUL85884.1\|3286561_3287071_-\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
AUL85885.1\|3287473_3287698_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.7e-20	92.5
AUL85886.1\|3287779_3288094_-	PerC family transcriptional regulator	NA	NA	NA	NA
AUL85887.1\|3288336_3288477_-	hypothetical protein	NA	NA	NA	NA
AUL85888.1\|3288559_3289027_-\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	2.2e-72	93.5
AUL85889.1\|3289028_3289142_-	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
AUL85890.1\|3289362_3289896_-	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.1e-99	94.4
AUL85891.1\|3289940_3290123_-	hypothetical protein	NA	NA	NA	NA
AUL85892.1\|3290091_3290328_+	hypothetical protein	NA	NA	NA	NA
AUL85893.1\|3290276_3290621_+	hypothetical protein	NA	NA	NA	NA
AUL85894.1\|3290583_3290799_-\|holin	holin	Q6H9V8	Enterobacteria_phage	1.7e-32	97.2
AUL87809.1\|3292457_3293682_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.1e-176	98.7
AUL85895.1\|3294957_3295731_-	iroE	NA	NA	NA	NA
AUL85896.1\|3296278_3296491_+	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	1.5e-25	95.4
AUL85897.1\|3296658_3296937_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.7e-12	48.4
AUL85898.1\|3296938_3297988_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.4e-110	54.9
3297511:3297526	attL	NA	NA	NA	NA
AUL85899.1\|3298000_3298372_+	hypothetical protein	V5URS4	Shigella_phage	1.3e-35	63.7
AUL85900.1\|3298361_3298733_+	antitermination protein	Q777W5	Enterobacteria_phage	1.0e-53	84.0
AUL85901.1\|3298884_3299703_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AUL85902.1\|3299989_3300187_+	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	2.6e-27	96.9
AUL85903.1\|3300812_3301085_-	hypothetical protein	A0A0U2S629	Escherichia_phage	1.1e-12	45.8
AUL85904.1\|3301193_3301595_+	XRE family transcriptional regulator	A0A1B5FPF4	Escherichia_phage	7.4e-13	54.5
AUL85905.1\|3301622_3301814_+	antitoxin	NA	NA	NA	NA
AUL85906.1\|3301813_3302101_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AUL85907.1\|3302377_3302533_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	3.0e-07	53.2
AUL85908.1\|3302534_3302663_+	hypothetical protein	NA	NA	NA	NA
AUL85909.1\|3302674_3303064_+	hypothetical protein	A0A2R2Z306	Escherichia_phage	1.5e-05	30.0
AUL85910.1\|3303250_3303436_-	hypothetical protein	NA	NA	NA	NA
AUL87810.1\|3303437_3303743_-	hypothetical protein	NA	NA	NA	NA
AUL85911.1\|3304009_3304198_+	cell division inhibition protein DicB	NA	NA	NA	NA
AUL85912.1\|3304194_3304386_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AUL85913.1\|3304479_3306915_+	exonuclease	A0A192Y6E0	Salmonella_phage	6.4e-59	58.2
AUL85914.1\|3306982_3307225_+	DUF4224 domain-containing protein	NA	NA	NA	NA
AUL85915.1\|3307202_3308222_+\|integrase	integrase	A0A192Y7M7	Salmonella_phage	1.3e-85	49.7
AUL85916.1\|3308629_3309289_+	BAX inhibitor protein	A0A2H4JFM9	uncultured_Caudovirales_phage	6.2e-41	48.5
3315007:3315022	attR	NA	NA	NA	NA

DBSCAN-SWA_11

3625261 : 3636977

Enterobacteria_phage(43.75%)

holin,transposase,integrase,tail

attL 3623498:3623512|attR 3637051:3637065

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3623498:3623512	attL	NA	NA	NA	NA
AUL87826.1\|3625261_3625507_-\|tail	phage tail protein	Q687E6	Enterobacteria_phage	2.4e-30	98.5
AUL86195.1\|3625731_3625947_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.0e-33	100.0
AUL86196.1\|3626813_3627530_-	hypothetical protein	NA	NA	NA	NA
AUL86197.1\|3627809_3628433_-	antitermination protein	K7PM87	Enterobacteria_phage	2.2e-112	98.1
AUL86198.1\|3628429_3629095_-	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	7.2e-130	98.6
AUL86199.1\|3629247_3629430_+	recombinase	A0A1I9LJN0	Stx_converting_phage	7.2e-24	98.3
AUL86200.1\|3629426_3630107_+	exonuclease	B6DZ61	Enterobacteria_phage	5.6e-130	97.3
AUL86201.1\|3630103_3630265_+	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	7.7e-22	96.0
AUL86202.1\|3630257_3630815_+	phage N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	2.0e-61	62.3
AUL86203.1\|3630825_3631107_+	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
AUL86204.1\|3631205_3631463_+	conjugal transfer protein TraR	A0A1I9LJM6	Stx_converting_phage	2.0e-32	97.1
AUL86205.1\|3631468_3632681_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	8.4e-169	99.0
AUL86206.1\|3633136_3633505_-	hypothetical protein	Q716C1	Shigella_phage	2.5e-39	97.7
AUL86207.1\|3633648_3634257_+	eae-like domain protein	Q9MCR3	Enterobacteria_phage	5.0e-21	96.4
AUL86208.1\|3634387_3635086_+	DUF1311 domain-containing protein	J9Q6K3	Salmonella_phage	1.5e-101	81.9
AUL86209.1\|3635310_3635622_+	hypothetical protein	A0A1I9LJL8	Stx_converting_phage	2.1e-55	100.0
AUL86210.1\|3635906_3636977_+\|integrase	integrase	Q9MCR4	Enterobacteria_phage	5.1e-202	100.0
3637051:3637065	attR	NA	NA	NA	NA

DBSCAN-SWA_12

4073332 : 4116014

Enterobacteria_phage(33.33%)

transposase,integrase

attL 4073275:4073334|attR 4102208:4102974

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4073275:4073334	attL	NA	NA	NA	NA
AUL86598.1\|4073332_4074026_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL86599.1\|4074873_4075764_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUL86600.1\|4075884_4080138_-	intimin-like adhesin FdeC	NA	NA	NA	NA
AUL86601.1\|4080703_4081555_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.2e-47	40.7
AUL86602.1\|4081581_4082571_+	aldo/keto reductase	NA	NA	NA	NA
AUL86603.1\|4082602_4083538_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL86604.1\|4083958_4084060_+	hypothetical protein	NA	NA	NA	NA
AUL87845.1\|4084423_4084687_+	50S ribosomal protein L31	NA	NA	NA	NA
AUL86605.1\|4084686_4084827_+	50S ribosomal protein L36	NA	NA	NA	NA
AUL86606.1\|4084861_4085089_-	hypothetical protein	NA	NA	NA	NA
AUL86607.1\|4085863_4086073_+	hypothetical protein	NA	NA	NA	NA
AUL86608.1\|4086047_4086742_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL86609.1\|4087253_4087889_+	fimbrial protein	NA	NA	NA	NA
AUL86610.1\|4087946_4088615_+	fimbrial chaperone EcpB	NA	NA	NA	NA
AUL86611.1\|4088800_4090014_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7
AUL86612.1\|4090065_4090218_-	AlpA family phage regulatory protein	NA	NA	NA	NA
AUL86613.1\|4090265_4090481_+	excinuclease ABC subunit B	NA	NA	NA	NA
AUL86614.1\|4090646_4091861_-\|integrase	integrase	Q7M297	Enterobacteria_phage	9.7e-133	56.5
AUL86615.1\|4092216_4093470_-	gamma-glutamyl-phosphate reductase	A0A1X9I5D4	Streptococcus_phage	9.8e-96	47.2
AUL86616.1\|4093481_4094585_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
AUL86617.1\|4095965_4096367_-	sigma factor-binding protein Crl	NA	NA	NA	NA
AUL86618.1\|4096424_4097669_-	esterase	NA	NA	NA	NA
AUL86619.1\|4097760_4098219_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
AUL86620.1\|4098479_4099937_+	cytosol nonspecific dipeptidase	NA	NA	NA	NA
AUL86621.1\|4099993_4100608_-	peptide chain release factor H	NA	NA	NA	NA
AUL86622.1\|4101690_4101954_-	hypothetical protein	NA	NA	NA	NA
AUL86623.1\|4102265_4102959_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL86624.1\|4103211_4104267_-	DNA polymerase IV	NA	NA	NA	NA
4102208:4102974	attR	NA	NA	NA	NA
AUL86625.1\|4104337_4105108_-	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA
AUL86626.1\|4105742_4106003_+	type II toxin-antitoxin system antitoxin DinJ	NA	NA	NA	NA
AUL86627.1\|4106005_4106284_+	type II toxin-antitoxin system mRNA interferase toxin YafQ	NA	NA	NA	NA
AUL86628.1\|4106439_4107180_+	transpeptidase	NA	NA	NA	NA
AUL86629.1\|4107150_4107918_-	class II glutamine amidotransferase	NA	NA	NA	NA
AUL86630.1\|4108123_4108702_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	3.3e-14	31.4
AUL86631.1\|4108941_4111386_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUL86632.1\|4111428_4111902_-	inhibitor of vertebrate lysozyme	NA	NA	NA	NA
AUL86633.1\|4112055_4112826_+	amidohydrolase	NA	NA	NA	NA
AUL86634.1\|4114413_4114713_-	hypothetical protein	NA	NA	NA	NA
AUL86635.1\|4115320_4116014_+\|transposase	IS1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

4121453 : 4192546

Enterobacteria_phage(11.11%)

transposase,tRNA,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL86639.1\|4121453_4121867_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AUL86640.1\|4121870_4123721_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AUL86641.1\|4125387_4126601_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7
AUL86642.1\|4128057_4128801_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA
AUL86643.1\|4128739_4130218_+	type VI secretion system protein TssA	NA	NA	NA	NA
AUL86644.1\|4130296_4133761_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AUL86645.1\|4135147_4135630_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AUL86646.1\|4135673_4136588_+	hypothetical protein	NA	NA	NA	NA
AUL86647.1\|4136597_4137077_+	hypothetical protein	NA	NA	NA	NA
AUL86648.1\|4137213_4137999_-	hypothetical protein	NA	NA	NA	NA
AUL87846.1\|4138537_4139269_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	3.4e-40	39.0
AUL86649.1\|4139333_4139801_+	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
AUL86650.1\|4139797_4140520_-	SAM-dependent methyltransferase	NA	NA	NA	NA
AUL86651.1\|4140553_4141309_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AUL86652.1\|4141380_4142739_+	murein transglycosylase D	A0A2H4J9N7	uncultured_Caudovirales_phage	1.3e-08	36.0
AUL86653.1\|4142787_4143411_-	SAM-dependent methyltransferase	NA	NA	NA	NA
AUL86654.1\|4143414_4144215_-	EEP domain-containing protein	NA	NA	NA	NA
AUL86655.1\|4144472_4145167_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL86656.1\|4151062_4151638_-	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AUL86657.1\|4151825_4152857_+	D-methionine ABC transporter, ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-35	40.2
AUL86658.1\|4152849_4153503_+	methionine ABC transporter	NA	NA	NA	NA
AUL86659.1\|4153542_4154358_+	methionine ABC transporter substrate-binding protein MetQ	NA	NA	NA	NA
AUL86660.1\|4154475_4154880_+	Rcs stress response system protein RcsF	NA	NA	NA	NA
AUL86661.1\|4154876_4155584_+\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
AUL86662.1\|4155694_4157413_+\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
AUL86663.1\|4158443_4159154_-	copper homeostasis/adhesion lipoprotein NlpE	NA	NA	NA	NA
AUL86664.1\|4159167_4159590_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
AUL86665.1\|4160017_4160218_+	hypothetical protein	NA	NA	NA	NA
AUL87847.1\|4160210_4160465_+	protein rof	NA	NA	NA	NA
AUL86666.1\|4160513_4161812_-\|tRNA	tRNA(Ile)-lysidine synthetase	NA	NA	NA	NA
AUL86667.1\|4161876_4162266_-	VOC family protein	NA	NA	NA	NA
AUL86668.1\|4162322_4164464_-	lysine decarboxylase	NA	NA	NA	NA
AUL86669.1\|4164562_4165522_-	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
AUL86670.1\|4165534_4169017_-	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	1.1e-208	36.9
AUL86671.1\|4169053_4169650_-	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	3.9e-26	40.0
AUL86672.1\|4169646_4170795_-	lipid-A-disaccharide synthase	NA	NA	NA	NA
AUL86673.1\|4170794_4171583_-	acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AUL86674.1\|4171586_4172042_-	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
AUL86675.1\|4172146_4173172_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
AUL86676.1\|4173175_4173661_-	chaperone protein Skp	NA	NA	NA	NA
AUL86677.1\|4173782_4176215_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA
AUL86678.1\|4176244_4177597_-\|protease	zinc metalloprotease RseP	NA	NA	NA	NA
AUL86679.1\|4177608_4178466_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
AUL86680.1\|4178478_4179237_-	(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase	R9W0U9	Flavobacterium_phage	7.7e-27	44.4
AUL86681.1\|4179425_4180622_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
AUL86682.1\|4180713_4181271_-	ribosome-recycling factor	NA	NA	NA	NA
AUL86683.1\|4181562_4182288_-	UMP kinase	NA	NA	NA	NA
AUL86684.1\|4182434_4183286_-	elongation factor Ts	NA	NA	NA	NA
AUL86685.1\|4183304_4183592_+	hypothetical protein	NA	NA	NA	NA
AUL86686.1\|4183543_4184269_-	30S ribosomal protein S2	NA	NA	NA	NA
AUL86687.1\|4184636_4185431_+	methionine aminopeptidase	NA	NA	NA	NA
AUL86688.1\|4185492_4188165_+	bifunctional uridylyltransferase/uridylyl-removing protein GlnD	NA	NA	NA	NA
AUL86689.1\|4188195_4189020_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
AUL86690.1\|4189334_4189721_+	hypothetical protein	NA	NA	NA	NA
AUL86691.1\|4189809_4190967_-	carbohydrate diacid regulon transcriptional regulator CdaR	NA	NA	NA	NA
AUL86692.1\|4191121_4192546_-\|protease	periplasmic serine endoprotease DegP	A0A1B1IT49	uncultured_Mediterranean_phage	1.9e-26	28.8

DBSCAN-SWA_14

4373522 : 4414709

Enterobacteria_phage(23.53%)

tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL86844.1\|4373522_4374209_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
AUL86845.1\|4374608_4374749_-	hypothetical protein	NA	NA	NA	NA
AUL86846.1\|4374844_4375561_+	DNA-binding response regulator	NA	NA	NA	NA
AUL86847.1\|4375620_4376973_-	cell envelope integrity protein CreD	NA	NA	NA	NA
AUL86848.1\|4377030_4378455_-	two-component system sensor histidine kinase CreC	Q8QKV7	Ectocarpus_siliculosus_virus	3.6e-09	20.4
AUL86849.1\|4378454_4379144_-	two-component system response regulator CreB	W8CYM9	Bacillus_phage	8.8e-30	35.3
AUL86850.1\|4379156_4379630_-	protein CreA	NA	NA	NA	NA
AUL86851.1\|4379840_4380710_+	right origin-binding protein	NA	NA	NA	NA
AUL86852.1\|4380706_4381354_-	phosphoglycerate mutase	NA	NA	NA	NA
AUL87856.1\|4381405_4381918_+	non-canonical purine NTP phosphatase	NA	NA	NA	NA
AUL86853.1\|4382064_4382391_-	Trp operon repressor	NA	NA	NA	NA
AUL86854.1\|4382480_4384418_-	murein transglycosylase	A0A1P8CWQ1	Bacillus_phage	2.3e-11	35.7
AUL87857.1\|4384526_4384655_-	methionine aminopeptidase	NA	NA	NA	NA
AUL86855.1\|4384628_4386296_+	energy-dependent translational throttle protein EttA	A0A1V0SKJ1	Klosneuvirus	3.7e-42	26.4
AUL86856.1\|4386602_4387835_-	trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR	A0A0C5K935	Enterococcus_phage	2.1e-82	42.6
AUL86857.1\|4387855_4389238_-	DNA repair protein RadA	NA	NA	NA	NA
AUL86858.1\|4389286_4390255_-	phosphoserine phosphatase	NA	NA	NA	NA
AUL86859.1\|4390360_4391005_+	hypothetical protein	NA	NA	NA	NA
AUL86860.1\|4391032_4392049_+	lipoate-protein ligase LplA	NA	NA	NA	NA
AUL86861.1\|4392049_4393381_-	transcriptional regulator	NA	NA	NA	NA
AUL86862.1\|4393547_4394267_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
AUL86863.1\|4394323_4395547_-	phosphopentomutase	NA	NA	NA	NA
AUL86864.1\|4395598_4396921_-	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	6.8e-79	39.8
AUL86865.1\|4397087_4397867_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
AUL86866.1\|4398125_4399676_+	YjjI family glycine radical enzyme	NA	NA	NA	NA
AUL86867.1\|4399647_4399800_+	hypothetical protein	NA	NA	NA	NA
AUL86868.1\|4399806_4400511_+	YjjW family glycine radical enzyme activase	NA	NA	NA	NA
AUL86869.1\|4400623_4401406_-	metal-dependent hydrolase	NA	NA	NA	NA
AUL86870.1\|4401402_4402476_-	patatin family protein	NA	NA	NA	NA
AUL86871.1\|4402597_4402777_-	DUF1328 domain-containing protein	A0A0N7CBR2	Salmonella_phage	2.0e-10	64.2
AUL86872.1\|4402885_4403491_-	molecular chaperone OsmY	NA	NA	NA	NA
AUL86873.1\|4403883_4405470_-	peptide chain release factor 3	D0R0F5	Streptococcus_phage	5.3e-30	24.9
AUL86874.1\|4405689_4405938_+	damage-inducible protein DinI	A5LH55	Enterobacteria_phage	1.1e-38	100.0
AUL86875.1\|4406306_4406576_-\|tail	phage tail protein	H6WZN0	Escherichia_phage	3.8e-45	100.0
AUL86876.1\|4406577_4407891_-\|tail	phage tail protein	A0A0P0ZCC1	Stx2-converting_phage	3.2e-81	98.2
AUL86877.1\|4407955_4408555_-	Ail/Lom family protein	A0A0P0ZCF6	Stx2-converting_phage	5.9e-107	97.0
AUL86878.1\|4408621_4412101_-\|tail	phage tail protein	B6DZB5	Enterobacteria_phage	0.0e+00	96.4
AUL86879.1\|4412337_4413018_-\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	1.6e-108	91.1
AUL86880.1\|4412915_4413659_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	9.8e-144	96.3
AUL86881.1\|4413669_4414368_-\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	2.0e-130	97.8
AUL86882.1\|4414367_4414709_-\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	4.7e-61	97.3

DBSCAN-SWA_15

4473732 : 4571779

109

Stx2-converting_phage(37.8%)

head,lysis,tRNA,integrase,holin,terminase,tail,transposase,capsid

attL 4525746:4525763|attR 4574718:4574735

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL86934.1\|4473732_4474427_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL86935.1\|4474587_4475313_+	DNA-binding response regulator	NA	NA	NA	NA
AUL86936.1\|4475270_4475948_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AUL86937.1\|4475984_4476773_-	hydroxamate siderophore iron reductase FhuF	NA	NA	NA	NA
AUL86938.1\|4476874_4477150_+	DUF1435 domain-containing protein	NA	NA	NA	NA
AUL86939.1\|4477710_4478742_-	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA	NA	NA	NA
AUL86940.1\|4478844_4479258_+	DNA polymerase III subunit psi	NA	NA	NA	NA
AUL86941.1\|4479226_4479673_+	ribosomal-protein-alanine N-acetyltransferase RimI	NA	NA	NA	NA
AUL86942.1\|4479687_4480365_+	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA
AUL86943.1\|4480430_4480532_+	peptide chain release factor 3	NA	NA	NA	NA
AUL86944.1\|4480750_4481974_+\|integrase	integrase	A0A291AWU1	Escherichia_phage	1.3e-233	98.0
AUL87861.1\|4482145_4483051_-	hypothetical protein	NA	NA	NA	NA
AUL86945.1\|4483924_4484119_-	DNA-binding protein	A5LH59	Enterobacteria_phage	5.8e-32	98.4
AUL87862.1\|4484118_4484451_-	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	1.5e-43	100.0
AUL86946.1\|4484953_4485640_-	hypothetical protein	H6WZG2	Escherichia_phage	3.7e-121	87.1
AUL86947.1\|4485636_4485858_-	conjugal transfer protein TraR	A0A1I9LJM6	Stx_converting_phage	2.9e-35	100.0
AUL86948.1\|4485956_4486238_-	cell division protein ZapA	Q6H9Z3	Enterobacteria_phage	3.2e-47	100.0
AUL86949.1\|4486248_4486440_-	hypothetical protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
AUL87863.1\|4486417_4486594_-	DUF1317 domain-containing protein	A0A0P0ZAS9	Stx2-converting_phage	1.3e-22	100.0
AUL86950.1\|4486590_4487271_-	exonuclease	A0A0P0ZFI7	Escherichia_phage	1.9e-130	98.2
AUL86951.1\|4487267_4488218_-	recombinase RecT	A0A0P0ZFY9	Escherichia_phage	2.0e-173	96.8
AUL86952.1\|4488234_4488516_-	hypothetical protein	A0A0P0ZFG3	Escherichia_phage	1.1e-47	100.0
AUL86953.1\|4488536_4488818_-	AbrB family transcriptional regulator	A0A0P0ZGC3	Escherichia_phage	3.0e-45	100.0
AUL86954.1\|4488829_4489042_-	cell division inhibitor protein	A0A0P0ZGD1	Escherichia_phage	5.8e-33	100.0
AUL86955.1\|4489112_4490012_-	hypothetical protein	A0A0P0ZG86	Escherichia_phage	1.4e-139	96.2
AUL86956.1\|4490515_4491469_-	restriction endonuclease	A0A0P0ZG22	Escherichia_phage	7.0e-187	100.0
AUL86957.1\|4491465_4492935_-	SAM-dependent methyltransferase	A0A2L1IV91	Escherichia_phage	1.9e-284	99.6
AUL86958.1\|4493029_4493743_-	LexA family transcriptional repressor	A0A2R2X2B0	Escherichia_phage	6.3e-132	100.0
AUL86959.1\|4493838_4494042_+	Cro/Cl family transcriptional regulator	A0A2R2Z333	Escherichia_phage	9.8e-30	98.5
AUL86960.1\|4494212_4494407_+	hypothetical protein	NA	NA	NA	NA
AUL86961.1\|4494573_4494951_+	hypothetical protein	A0A2R2Z329	Escherichia_phage	7.6e-60	98.4
AUL86962.1\|4494944_4496465_+	ATP-dependent helicase	A0A2R2Z335	Escherichia_phage	8.3e-307	99.8
AUL86963.1\|4496454_4497426_+	DNA primase	A0A0H4IPK0	Shigella_phage	1.9e-195	100.0
AUL86964.1\|4497425_4497875_+	DUF1367 domain-containing protein	A0A0P0ZFW0	Escherichia_phage	7.6e-83	100.0
AUL86965.1\|4497882_4498446_+	recombination protein NinG	A0A0P0ZG59	Escherichia_phage	8.9e-105	100.0
AUL86966.1\|4498442_4498637_+	protein ninH	A0A0P0ZGE1	Escherichia_phage	1.4e-30	98.4
AUL86967.1\|4498629_4499064_+	antitermination protein	A0A0P0ZGJ3	Escherichia_phage	4.8e-82	100.0
AUL86968.1\|4499052_4499298_-	hypothetical protein	A0A0P0ZGS0	Escherichia_phage	5.0e-36	100.0
AUL86969.1\|4499312_4499465_+	DNA methylase	A0A2R2Z327	Escherichia_phage	4.0e-20	100.0
AUL86970.1\|4499853_4500813_+	Shiga toxin Stx2 subunit A	Q5TJL6	Enterobacteria_phage	9.6e-176	99.7
AUL86971.1\|4500824_4501094_+	Shiga toxin Stx2 subunit B	Q5TJL5	Enterobacteria_phage	2.1e-43	100.0
AUL86972.1\|4501390_4501714_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	6.9e-62	100.0
AUL86973.1\|4501901_4502596_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL86974.1\|4502731_4504669_+	sialate O-acetylesterase	A0A0P0ZBP4	Stx2-converting_phage	0.0e+00	99.1
AUL86975.1\|4504805_4504985_+	DUF1378 domain-containing protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
AUL86976.1\|4505025_4505298_+	DUF826 domain-containing protein	A0A0P0ZBB8	Stx2-converting_phage	2.2e-21	100.0
AUL86977.1\|4505374_4505590_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.0e-33	100.0
AUL86978.1\|4505589_4506087_+	lysozyme	A0A0N7KZA0	Stx2-converting_phage	2.4e-90	97.0
AUL86979.1\|4506083_4506521_+\|lysis	lysis protein	A0A0P0ZBQ9	Stx2-converting_phage	4.2e-70	96.6
AUL86980.1\|4506723_4507221_+	DNA-binding protein	A0A0P0ZBU2	Stx2-converting_phage	3.6e-94	100.0
AUL86981.1\|4507217_4507475_+	hypothetical protein	A0A0P0ZBT1	Stx2-converting_phage	5.0e-39	100.0
AUL86982.1\|4507551_4507686_-	hypothetical protein	NA	NA	NA	NA
AUL86983.1\|4507937_4508165_-	DUF3950 domain-containing protein	A0A0P0ZE23	Stx2-converting_phage	1.7e-35	100.0
AUL86984.1\|4508206_4508572_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	4.0e-66	99.2
AUL87864.1\|4508540_4508678_+	DNase	H6WZK7	Escherichia_phage	8.6e-06	75.0
AUL86985.1\|4508861_4509425_+\|terminase	terminase small subunit	A0A0P0ZDD1	Stx2-converting_phage	4.7e-90	100.0
AUL86986.1\|4509421_4511083_+\|terminase	terminase large subunit	A0A0N7KZG0	Stx2-converting_phage	0.0e+00	99.5
AUL86987.1\|4511146_4513084_+\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	99.5
AUL87865.1\|4513128_4513350_+	hypothetical protein	A0A0P0ZD92	Stx2-converting_phage	5.8e-36	100.0
AUL86988.1\|4515870_4516197_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDE0	Stx2-converting_phage	5.4e-54	100.0
AUL86989.1\|4516207_4516558_+\|head,tail	head-tail adaptor protein	A0A0P0ZB28	Stx2-converting_phage	1.0e-58	99.1
AUL86990.1\|4516554_4517001_+	hypothetical protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
AUL86991.1\|4517068_4517341_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	3.9e-42	98.9
AUL86992.1\|4517406_4518123_+\|tail	phage tail protein	B6DZA6	Enterobacteria_phage	2.8e-127	99.6
AUL86993.1\|4518137_4518512_+\|tail	phage tail protein	A0A0P0ZE84	Stx2-converting_phage	1.7e-64	99.2
AUL86994.1\|4519814_4520129_+	hypothetical protein	A0A0P0ZE78	Stx2-converting_phage	1.2e-34	97.8
AUL86995.1\|4522093_4522435_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	4.7e-61	97.3
AUL86996.1\|4522434_4523133_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	2.0e-130	97.8
AUL86997.1\|4523143_4523887_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	9.8e-144	96.3
AUL86998.1\|4524700_4528180_+\|tail	phage tail protein	B6DZB5	Enterobacteria_phage	0.0e+00	96.4
4525746:4525763	attL	NA	NA	NA	NA
AUL86999.1\|4528246_4528846_+	Ail/Lom family protein	A0A0P0ZCF6	Stx2-converting_phage	5.9e-107	97.0
AUL87000.1\|4528910_4530224_+\|tail	phage tail protein	A0A0P0ZE15	Stx2-converting_phage	3.6e-80	97.9
AUL87001.1\|4530225_4530495_+\|tail	phage tail protein	H6WZN0	Escherichia_phage	1.9e-44	97.8
AUL87002.1\|4530704_4530896_+	hypothetical protein	NA	NA	NA	NA
AUL87003.1\|4530924_4531911_+	peptidase M85	NA	NA	NA	NA
AUL87004.1\|4532282_4532498_-	DinI family protein	Q687E4	Enterobacteria_phage	1.9e-31	98.6
AUL87005.1\|4532596_4532977_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
AUL87006.1\|4532973_4533321_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
AUL87007.1\|4533370_4534909_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	6.5e-299	99.6
AUL87008.1\|4537722_4537869_+	DUF1378 domain-containing protein	A0A2R2Z345	Escherichia_phage	1.9e-06	55.3
AUL87009.1\|4537908_4538602_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL87010.1\|4538711_4538957_+	DUF826 domain-containing protein	NA	NA	NA	NA
AUL87011.1\|4539571_4539772_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
AUL87012.1\|4539725_4540463_+	protein mom	A0A0C4UQZ7	Shigella_phage	7.5e-104	79.0
AUL87013.1\|4540916_4541954_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AUL87014.1\|4542880_4543441_-	DNA-invertase	A0A0C4UR34	Shigella_phage	4.3e-75	75.7
AUL87866.1\|4543454_4543640_-	hypothetical protein	NA	NA	NA	NA
AUL87015.1\|4543566_4543890_+\|tail	phage tail protein	A0A0U2SAV1	Escherichia_phage	1.2e-21	56.4
AUL87867.1\|4543924_4544446_-\|tail	phage tail protein	A0A0U2QV64	Escherichia_phage	2.1e-47	52.6
AUL87868.1\|4544525_4544729_-\|tail	phage tail protein	NA	NA	NA	NA
AUL87016.1\|4545412_4545973_-	DUF2313 domain-containing protein	C9DGQ7	Escherichia_phage	3.9e-44	49.1
AUL87017.1\|4545963_4547049_-	hypothetical protein	A0A0C4UQU9	Shigella_phage	1.1e-98	53.2
AUL87018.1\|4547193_4548480_-\|integrase	site-specific integrase	A0A0N7KZF5	Stx2-converting_phage	5.8e-253	100.0
AUL87019.1\|4548513_4548768_-	excisionase	Q859D3	Escherichia_coli_phage	3.0e-44	100.0
AUL87020.1\|4548786_4548921_-	hypothetical protein	A0A0P0ZDP5	Stx2-converting_phage	4.9e-22	100.0
AUL87021.1\|4550048_4550399_-	Eae protein	A0A0P0ZBF8	Stx2-converting_phage	7.0e-60	100.0
AUL87022.1\|4550389_4550926_-	HD family hydrolase	A0A0P0ZCH9	Stx2-converting_phage	9.7e-101	100.0
AUL87023.1\|4551053_4551878_-	DUF2303 domain-containing protein	A0A0P0ZBZ4	Stx2-converting_phage	2.7e-150	100.0
AUL87024.1\|4551943_4552306_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
AUL87025.1\|4552399_4553093_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL87026.1\|4553707_4557697_-	autotransporter outer membrane beta-barrel domain-containing protein	Q9LA58	Enterobacterial_phage	5.2e-308	45.1
AUL87027.1\|4559059_4559754_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL87028.1\|4559844_4561107_-\|integrase	integrase	Q7M297	Enterobacteria_phage	1.7e-79	38.2
AUL87029.1\|4561573_4562593_+	NAD(P)-dependent alcohol dehydrogenase	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	2.4e-44	30.1
AUL87030.1\|4564386_4565469_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA
AUL87031.1\|4565468_4566569_-	LPS export ABC transporter permease LptF	NA	NA	NA	NA
AUL87032.1\|4566835_4568347_+	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	1.0e-46	38.0
AUL87869.1\|4568480_4568924_+	DNA polymerase III subunit chi	NA	NA	NA	NA
AUL87033.1\|4568923_4571779_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	7.9e-141	36.7
4574718:4574735	attR	NA	NA	NA	NA

DBSCAN-SWA_16

4649569 : 4703505

Vibrio_phage(15.38%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL87109.1\|4649569_4650721_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
AUL87110.1\|4650677_4651040_-	hypothetical protein	NA	NA	NA	NA
AUL87111.1\|4651058_4651460_-	DUF2170 domain-containing protein	NA	NA	NA	NA
AUL87112.1\|4651586_4652318_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
AUL87113.1\|4652498_4654940_-	ribonuclease R	Q0GXV6	Lactococcus_phage	2.9e-67	33.1
AUL87114.1\|4654978_4655404_-	transcriptional regulator	NA	NA	NA	NA
AUL87115.1\|4655608_4656907_-	adenylosuccinate synthetase	W5S5V7	Pithovirus	2.2e-66	35.9
AUL87116.1\|4657010_4657208_-	DUF2065 domain-containing protein	NA	NA	NA	NA
AUL87117.1\|4657289_4658294_-\|protease	protease modulator HflC	NA	NA	NA	NA
AUL87118.1\|4658296_4659556_-\|protease	protease modulator HflK	A0A1L2CVV0	Pectobacterium_phage	3.6e-05	25.5
AUL87119.1\|4659641_4660922_-	GTPase HflX	NA	NA	NA	NA
AUL87120.1\|4660998_4661307_-	RNA-binding protein Hfq	NA	NA	NA	NA
AUL87121.1\|4661392_4662343_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
AUL87122.1\|4662335_4664183_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	3.4e-60	41.3
AUL87123.1\|4664192_4665527_-	N-acetylmuramoyl-L-alanine amidase AmiB	A0A067ZJB6	Vibrio_phage	8.8e-18	31.0
AUL87124.1\|4665545_4666007_-\|tRNA	tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE	NA	NA	NA	NA
AUL87125.1\|4665978_4667526_-	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
AUL87126.1\|4667524_4668664_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
AUL87127.1\|4669564_4670110_-	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.2e-28	40.4
AUL87128.1\|4670204_4671257_+	ribosome small subunit-dependent GTPase	NA	NA	NA	NA
AUL87129.1\|4671353_4672322_+	phosphatidylserine decarboxylase	NA	NA	NA	NA
AUL87130.1\|4672343_4675667_+	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA
AUL87131.1\|4676605_4677299_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL87132.1\|4678312_4679290_-	elongation factor P--(R)-beta-lysine ligase	A0A2K9KZX5	Tupanvirus	6.8e-28	28.2
AUL87133.1\|4679614_4681423_+	fumarate reductase (quinol) flavoprotein subunit	NA	NA	NA	NA
AUL87134.1\|4681415_4682150_+	succinate dehydrogenase/fumarate reductase iron-sulfur subunit	NA	NA	NA	NA
AUL87135.1\|4682160_4682556_+	fumarate reductase subunit FrdC	NA	NA	NA	NA
AUL87136.1\|4682566_4682926_+	fumarate reductase subunit D	NA	NA	NA	NA
AUL87137.1\|4682988_4684122_+	BlaEC family class C beta-lactamase	NA	NA	NA	NA
AUL87138.1\|4684210_4684744_+	hypothetical protein	A0A1W6JNX6	Morganella_phage	2.7e-47	55.0
AUL87139.1\|4684740_4685058_-	quaternary ammonium compound-resistance protein SugE	NA	NA	NA	NA
AUL87140.1\|4685239_4685386_-	entericidin B	NA	NA	NA	NA
AUL87141.1\|4685496_4685622_-	entericidin A	NA	NA	NA	NA
AUL87142.1\|4685673_4686240_-	elongation factor P	NA	NA	NA	NA
AUL87143.1\|4686281_4687310_+	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA
AUL87144.1\|4687704_4688574_+	hypothetical protein	NA	NA	NA	NA
AUL87145.1\|4688776_4689130_-	DUF4156 domain-containing protein	NA	NA	NA	NA
AUL87146.1\|4689267_4690914_-	molecular chaperone GroEL	A0A2I7SAK5	Vibrio_phage	5.3e-190	68.9
AUL87147.1\|4690957_4691251_-	co-chaperone GroES	K4F9I2	Cronobacter_phage	9.2e-13	45.4
AUL87148.1\|4691526_4692783_+	L-methionine/branched-chain amino acid transporter	NA	NA	NA	NA
AUL87149.1\|4692798_4693275_-	suppressor of F exclusion of phage T7	NA	NA	NA	NA
AUL87150.1\|4693611_4695048_+	aspartate ammonia-lyase	NA	NA	NA	NA
AUL87151.1\|4695165_4696467_+	anaerobic C4-dicarboxylate transporter DcuA	NA	NA	NA	NA
AUL87152.1\|4696582_4696921_+	divalent-cation tolerance protein CutA	NA	NA	NA	NA
AUL87153.1\|4696896_4698594_+	protein-disulfide reductase DsbD	NA	NA	NA	NA
AUL87154.1\|4698630_4699206_+	transcriptional regulator	NA	NA	NA	NA
AUL87155.1\|4700453_4701667_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7
AUL87156.1\|4702232_4703505_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	4.9e-175	98.0

DBSCAN-SWA_17

4825223 : 4876840

Enterobacteria_phage(31.25%)

lysis,integrase,holin,terminase,transposase,tail

attL 4825210:4825269|attR 4844232:4844997

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4825210:4825269	attL	NA	NA	NA	NA
AUL87268.1\|4825223_4825918_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL87269.1\|4826569_4826716_-\|integrase	integrase	NA	NA	NA	NA
AUL87270.1\|4826674_4826956_+	hypothetical protein	NA	NA	NA	NA
AUL87271.1\|4827054_4827591_-	ssDNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	1.1e-56	78.7
AUL87272.1\|4827845_4830668_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	56.1
AUL87273.1\|4830702_4831059_-	hypothetical protein	NA	NA	NA	NA
AUL87274.1\|4831062_4831479_-	thiamine phosphate synthase	NA	NA	NA	NA
AUL87275.1\|4831589_4832303_-	acid phosphatase AphA	NA	NA	NA	NA
AUL87276.1\|4833428_4834622_-	aromatic amino acid transaminase	NA	NA	NA	NA
AUL87277.1\|4834874_4835954_-	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	4.0e-29	27.9
AUL87278.1\|4836006_4837422_-	replicative DNA helicase	O80281	Escherichia_phage	4.8e-200	78.3
AUL87279.1\|4837504_4838488_+	quinone oxidoreductase	NA	NA	NA	NA
AUL87280.1\|4840832_4843547_+	DUF4765 domain-containing protein	A0A0N7KZG3	Stx2-converting_phage	0.0e+00	100.0
AUL87281.1\|4843582_4844276_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL87282.1\|4844276_4844993_+	DUF4765 domain-containing protein	A0A0N7KZG3	Stx2-converting_phage	6.6e-129	100.0
AUL87283.1\|4845170_4845500_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	1.7e-31	61.5
4844232:4844997	attR	NA	NA	NA	NA
AUL87284.1\|4847186_4847456_-\|tail	phage tail protein	Q6H9S8	Enterobacteria_phage	1.9e-44	98.9
AUL87285.1\|4847457_4848771_-\|tail	phage tail protein	A0A0P0ZE15	Stx2-converting_phage	5.5e-81	97.9
AUL87286.1\|4848835_4849435_-	Ail/Lom family protein	A0A0P0ZCF6	Stx2-converting_phage	2.0e-110	99.5
AUL87287.1\|4849501_4852978_-\|tail	phage tail protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	96.2
AUL87288.1\|4852982_4853246_-	hypothetical protein	A0A0N7KZG0	Stx2-converting_phage	3.7e-45	100.0
AUL87289.1\|4853242_4853806_-\|terminase	terminase small subunit	A0A0P0ZDD1	Stx2-converting_phage	4.7e-90	100.0
AUL87290.1\|4854093_4854459_-	HNH endonuclease	A0A0P0ZCH0	Stx2-converting_phage	2.0e-65	100.0
AUL87291.1\|4854500_4854728_+	DUF3950 domain-containing protein	A0A0P0ZCA1	Stx2-converting_phage	3.9e-35	100.0
AUL87292.1\|4855090_4855558_-\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	1.8e-74	96.1
AUL87293.1\|4855559_4855778_-	hypothetical protein	Q687G2	Enterobacteria_phage	1.0e-16	93.3
AUL87294.1\|4855855_4856389_-	lysozyme	A0A0N7KZF9	Stx2-converting_phage	2.8e-100	98.3
AUL87295.1\|4856439_4856784_-	DUF1327 domain-containing protein	A0A0P0ZD64	Stx2-converting_phage	1.0e-58	100.0
AUL87296.1\|4856788_4857004_-\|holin	holin	Q6H9V8	Enterobacteria_phage	7.7e-33	98.6
AUL87297.1\|4857442_4859293_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	98.9
AUL87298.1\|4859706_4859973_-	hypothetical protein	NA	NA	NA	NA
AUL87299.1\|4860737_4861796_-	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	4.9e-181	86.7
AUL87300.1\|4861946_4862150_-	hypothetical protein	A0A291AWX6	Escherichia_phage	1.8e-31	98.5
AUL87301.1\|4862420_4862867_+	hypothetical protein	NA	NA	NA	NA
AUL87302.1\|4862951_4863317_-	antitermination protein	Q777W5	Enterobacteria_phage	7.9e-54	81.8
AUL87303.1\|4863334_4864324_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.7e-194	99.4
AUL87304.1\|4864331_4865147_-	DNA-binding protein	U5P4K5	Shigella_phage	2.9e-149	99.6
AUL87305.1\|4865309_4865705_-	RusA family crossover junction endodeoxyribonuclease	A5LH74	Enterobacteria_phage	9.1e-64	96.0
AUL87306.1\|4865701_4866355_-	phage N-6-adenine-methyltransferase	Q8SBE9	Shigella_phage	3.3e-127	99.5
AUL87307.1\|4866449_4867256_-	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	7.9e-123	88.1
AUL87879.1\|4867252_4867477_-	hypothetical protein	A0A291AX25	Escherichia_phage	8.5e-35	94.6
AUL87308.1\|4867481_4868027_-	immunity protein	Q8SBF3	Shigella_phage	4.0e-94	98.9
AUL87880.1\|4867989_4868169_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	5.0e-30	94.9
AUL87309.1\|4868315_4868867_-	hypothetical protein	A0A291AWW8	Escherichia_phage	4.5e-101	100.0
AUL87310.1\|4868910_4869111_-	transcriptional regulator	U5P445	Shigella_phage	7.9e-32	100.0
AUL87311.1\|4869201_4869876_+	LexA family transcriptional repressor	U5P0T5	Shigella_phage	8.6e-131	99.1
AUL87312.1\|4869945_4870176_+	hypothetical protein	A0A291AWY6	Escherichia_phage	2.5e-13	97.4
AUL87313.1\|4870277_4870472_-	hypothetical protein	A0A291AWX8	Escherichia_phage	1.0e-31	100.0
AUL87314.1\|4870544_4870907_+	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
AUL87315.1\|4870971_4871796_+	DUF2303 domain-containing protein	U5P439	Shigella_phage	6.0e-150	100.0
AUL87316.1\|4871923_4872460_+	HD family hydrolase	S5MW55	Escherichia_phage	7.4e-101	100.0
AUL87317.1\|4872450_4872813_+	hypothetical protein	S5MC15	Escherichia_phage	2.1e-67	99.2
AUL87318.1\|4872809_4873013_+	hypothetical protein	K7PLX1	Enterobacteria_phage	5.2e-31	98.5
AUL87319.1\|4873005_4873245_+	hypothetical protein	S5MQM0	Escherichia_phage	4.4e-37	100.0
AUL87320.1\|4873241_4873796_+	hypothetical protein	K7PJQ4	Enterobacteria_phage	4.1e-102	99.5
AUL87321.1\|4873797_4873989_+	hypothetical protein	K7PKJ7	Enterobacteria_phage	1.6e-26	98.4
AUL87322.1\|4874998_4875571_+	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	2.4e-110	100.0
AUL87323.1\|4875607_4875889_+	pyocin activator protein PrtN	K7PGU0	Enterobacteria_phage	2.8e-43	96.8
AUL87324.1\|4876306_4876840_-	hypothetical protein	K7PKJ4	Enterobacteria_phage	5.3e-99	99.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP024055

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3623 : 68417

Stx2-converting_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL82724.1\|3623_5162_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	6.5e-299	99.6
AUL82725.1\|5211_5559_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
AUL82726.1\|5555_5936_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
AUL82790.1\|6169_6535_-	hypothetical protein	NA	NA	NA	NA
AUL82727.1\|6545_6737_-	hypothetical protein	K7PLX1	Enterobacteria_phage	3.5e-05	41.3
AUL82728.1\|7041_10944_-	autotransporter outer membrane beta-barrel domain-containing protein	Q9LA58	Enterobacterial_phage	5.5e-238	40.4
AUL82729.1\|11386_12925_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	6.5e-299	99.6
AUL82730.1\|12974_13322_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
AUL82731.1\|13581_13962_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
AUL82732.1\|13958_14306_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
AUL82733.1\|14355_15894_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	6.5e-299	99.6
AUL82734.1\|16487_17486_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
AUL82735.1\|17559_19281_-	phosphoethanolamine transferase CptA	NA	NA	NA	NA
AUL82736.1\|19370_20477_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
AUL82737.1\|20476_21298_-	carbohydrate transporter	NA	NA	NA	NA
AUL82738.1\|21564_21807_-	hypothetical protein	NA	NA	NA	NA
AUL82739.1\|22753_23967_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	8.4e-169	99.0
AUL82740.1\|24601_25333_-	complement resistance protein TraT	NA	NA	NA	NA
AUL82741.1\|25346_25784_-	conjugal transfer protein TraS	NA	NA	NA	NA
AUL82742.1\|25855_27017_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	4.0e-51	40.6
AUL82743.1\|27031_29809_-	conjugal transfer protein TraG	NA	NA	NA	NA
AUL82744.1\|29805_31179_-	conjugal transfer protein TraH	NA	NA	NA	NA
AUL82745.1\|31165_31591_-	conjugal transfer protein TrbF	NA	NA	NA	NA
AUL82746.1\|31544_31919_-	conjugal transfer protein TrbJ	NA	NA	NA	NA
AUL82747.1\|31815_32361_-	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB	NA	NA	NA	NA
AUL82748.1\|32347_32632_-	type-F conjugative transfer system pilin chaperone TraQ	NA	NA	NA	NA
AUL82749.1\|32712_32934_+	toxin ArtA	NA	NA	NA	NA
AUL82750.1\|32989_33337_-	protein TrbA	NA	NA	NA	NA
AUL82751.1\|33352_34126_-	type-F conjugative transfer system pilin assembly protein TraF	NA	NA	NA	NA
AUL82752.1\|34088_34349_-	protein TrbE	NA	NA	NA	NA
AUL82791.1\|34372_35764_-	type-F conjugative transfer system mating-pair stabilization protein TraN	NA	NA	NA	NA
AUL82753.1\|36174_36462_-	hypothetical protein	NA	NA	NA	NA
AUL82754.1\|36486_36645_-	single-stranded DNA-binding protein	NA	NA	NA	NA
AUL82755.1\|36702_37089_-	hypothetical protein	NA	NA	NA	NA
AUL82756.1\|37207_37399_-	hypothetical protein	NA	NA	NA	NA
AUL82757.1\|37395_37818_-	DUF1380 domain-containing protein	NA	NA	NA	NA
AUL82792.1\|37864_38167_-	antirestriction protein	NA	NA	NA	NA
AUL82758.1\|39733_39955_-	hypothetical protein	NA	NA	NA	NA
AUL82759.1\|39955_40639_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.9e-29	37.4
AUL82760.1\|40715_41021_-	hypothetical protein	NA	NA	NA	NA
AUL82793.1\|41024_41927_-	DUF1281 domain-containing protein	NA	NA	NA	NA
AUL82761.1\|41964_42237_-	hypothetical protein	NA	NA	NA	NA
AUL82762.1\|42578_43550_-	protein SopB	I3WF22	Macacine_betaherpesvirus	4.8e-175	100.0
AUL82763.1\|43549_44716_-	protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	7.0e-229	100.0
AUL82764.1\|45365_46579_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	8.4e-169	99.0
AUL82765.1\|47363_48341_+	repFIB replication protein A	J9Q7H0	Salmonella_phage	3.9e-100	59.2
AUL82766.1\|48625_49366_-	recombinase	I3WFA4	Macacine_betaherpesvirus	2.0e-24	57.6
AUL82767.1\|49876_50161_-	hypothetical protein	NA	NA	NA	NA
AUL82768.1\|51261_51651_-	cytochrome b562 family protein	NA	NA	NA	NA
AUL82769.1\|51694_53905_-	Catalase-peroxidase 2	NA	NA	NA	NA
AUL82770.1\|54080_55293_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	8.4e-169	99.0
AUL82771.1\|55296_55509_-	hypothetical protein	NA	NA	NA	NA
AUL82772.1\|58156_67102_+	toxin B	NA	NA	NA	NA
AUL82773.1\|67204_68417_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP024056

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP024055

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection