CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP024617	Escherichia coli strain SMN152SH1 plasmid pO177A1, complete sequence	0 crisprs	NA	0	1
CP024616	Escherichia coli strain SMN152SH1 plasmid pO177B1, complete sequence	0 crisprs	NA	0	0
CP024615	Escherichia coli strain SMN152SH1 plasmid pO177C1, complete sequence	0 crisprs	NA	0	0
CP024618	Escherichia coli strain SMN152SH1 chromosome, complete genome	4 crisprs	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas6e,cas7,cas8e	3	18

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

11113 : 19863

Stx2-converting_phage(66.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL87970.1\|11113_11494_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
AUL87971.1\|11753_12101_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
AUL87972.1\|14130_18033_+	autotransporter outer membrane beta-barrel domain-containing protein	Q9LA58	Enterobacterial_phage	5.5e-238	40.4
AUL87973.1\|18337_18529_+	hypothetical protein	K7PLX1	Enterobacteria_phage	3.5e-05	41.3
AUL88027.1\|18539_18905_+	hypothetical protein	NA	NA	NA	NA
AUL87974.1\|19138_19519_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
AUL87975.1\|19515_19863_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP024618

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CRISPR-Cas detection and classification

Crispr_ID: CP024618_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024618_1

562443-562558

Orphan

Consensus_repeat	Method
GATAAGACGCGCCAGCGTCGCATCAGGCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024618_1

>merge|CP024618|1|562443-562558|CRISPRCasFinder
GATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTT

>CP024618|1|1|562443-562558|CRISPRCasFinder
GATAAGACGCGCCAGCGTCGCATCAGGCGTT	GAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCA
GATAAGACGCGTCAGCGTCGCATCAGGCGTT

Protein	Signature genes	Signature genes Name	Protein_function
CP024618.1\|AUL88548.1\|570195_571179_-\|thiamine-ABC-transporter-substrate-binding-subunit	unknown	unknown	gnl\|CDD\|236883
CP024618.1\|AUL88538.1\|554583_555399_+\|molecular-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP024618.1\|AUL88534.1\|548828_549650_-\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
CP024618.1\|AUL88551.1\|574545_575151_-\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
CP024618.1\|AUL88541.1\|559256_561608_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP024618.1\|AUL88546.1\|567927_568626_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	unknown	unknown	gnl\|CDD\|182716
CP024618.1\|AUL88533.1\|548448_548826_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP024618.1\|AUL88543.1\|562577_564080_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP024618.1\|AUL92932.1\|566129_567008_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
CP024618.1\|AUL88537.1\|551974_554329_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP024618.1\|AUL88550.1\|573086_573218_+\|glucose-uptake-inhibitor-SgrT	unknown	unknown	gnl\|CDD\|374203
CP024618.1\|AUL88549.1\|571342_572998_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|184188
CP024618.1\|AUL88542.1\|561682_562378_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP024618.1\|AUL88540.1\|556186_559093_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP024618.1\|AUL88535.1\|549646_550636_-\|4-hydroxythreonine-4-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234696
CP024618.1\|AUL88539.1\|555515_556175_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP024618.1\|AUL88547.1\|568609_570220_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	unknown	unknown	gnl\|CDD\|181853
CP024618.1\|AUL88544.1\|564090_565791_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP024618.1\|AUL88545.1\|567093_567858_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
CP024618.1\|AUL88536.1\|550635_551922_-\|chaperone-SurA	unknown	unknown	gnl\|CDD\|236758

Protein	Function_ID	Function_description	E-value
CP024618.1\|AUL88548.1\|570195_571179_-\|thiamine-ABC-transporter-substrate-binding-subunit	gnl\|CDD\|236883	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional.	0
CP024618.1\|AUL88538.1\|554583_555399_+\|molecular-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	1.09407e-169
CP024618.1\|AUL88534.1\|548828_549650_-\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.76119e-148
CP024618.1\|AUL88551.1\|574545_575151_-\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	5.04233e-143
CP024618.1\|AUL88541.1\|559256_561608_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP024618.1\|AUL88546.1\|567927_568626_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	gnl\|CDD\|182716	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ.	3.50301e-164
CP024618.1\|AUL88533.1\|548448_548826_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	3.63315e-76
CP024618.1\|AUL88543.1\|562577_564080_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP024618.1\|AUL92932.1\|566129_567008_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
CP024618.1\|AUL88537.1\|551974_554329_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP024618.1\|AUL88550.1\|573086_573218_+\|glucose-uptake-inhibitor-SgrT	gnl\|CDD\|374203	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT.	0.00206924
CP024618.1\|AUL88549.1\|571342_572998_-\|transcriptional-regulator	gnl\|CDD\|184188	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR.	0
CP024618.1\|AUL88542.1\|561682_562378_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	9.28933e-180
CP024618.1\|AUL88540.1\|556186_559093_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP024618.1\|AUL88535.1\|549646_550636_-\|4-hydroxythreonine-4-phosphate-dehydrogenase	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP024618.1\|AUL88539.1\|555515_556175_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	1.55263e-158
CP024618.1\|AUL88547.1\|568609_570220_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	gnl\|CDD\|181853	PRK09433, thiP, thiamine transporter membrane protein; Reviewed.	0
CP024618.1\|AUL88544.1\|564090_565791_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP024618.1\|AUL88545.1\|567093_567858_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	2.87417e-49
CP024618.1\|AUL88536.1\|550635_551922_-\|chaperone-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0

>CP024618.1|AUL88542.1|561682_562378_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ
>CP024618.1|AUL88541.1|559256_561608_-|DNA-polymerase-II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPDIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF
>CP024618.1|AUL88540.1|556186_559093_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAVQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
>CP024618.1|AUL88539.1|555515_556175_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPHLLLHAEMLTITHPAYGNSMTFKAPADF
>CP024618.1|AUL88538.1|554583_555399_+|molecular-chaperone-DjlA
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
>CP024618.1|AUL88537.1|551974_554329_-|LPS-assembly-protein-LptD
MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQVVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL
>CP024618.1|AUL88536.1|550635_551922_-|chaperone-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN
>CP024618.1|AUL88535.1|549646_550636_-|4-hydroxythreonine-4-phosphate-dehydrogenase
MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRPYSPNSPAQPQTTGTLTLLPVALRESVTAGQLAIENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ
>CP024618.1|AUL88534.1|548828_549650_-|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES
>CP024618.1|AUL88533.1|548448_548826_-|Co2+/Mg2+-efflux-protein-ApaG
MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH
>CP024618.1|AUL88543.1|562577_564080_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR
>CP024618.1|AUL88544.1|564090_565791_-|ribulokinase
MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGCLPPASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVATL
>CP024618.1|AUL92932.1|566129_567008_+|arabinose-operon-transcriptional-regulator-AraC
MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGGVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEKVNDVAVKLS
>CP024618.1|AUL88545.1|567093_567858_+|DedA-family-protein
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
>CP024618.1|AUL88546.1|567927_568626_-|thiamine-ABC-transporter-ATP-binding-protein-ThiQ
MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQHKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTDELLSGKASASALLGITG
>CP024618.1|AUL88547.1|568609_570220_-|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP
MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWVAVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
>CP024618.1|AUL88548.1|570195_571179_-|thiamine-ABC-transporter-substrate-binding-subunit
MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKKPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR
>CP024618.1|AUL88549.1|571342_572998_-|transcriptional-regulator
MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANKQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP
>CP024618.1|AUL88550.1|573086_573218_+|glucose-uptake-inhibitor-SgrT
MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES
>CP024618.1|AUL88551.1|574545_575151_-|3-isopropylmalate-dehydratase-small-subunit
MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKTGEKTYRFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN

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Crispr_ID: CP024618_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024618_3

3892101-3892251

TypeI-E

I-E

Consensus_repeat	Method
GAACGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

2 spacers

cas2,cas6e,cas7,cas8e,cas3

The CRISPR arrays of CP024618_3

>merge|CP024618|3|3892101-3892251|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACTCTTACTGCTTGGTATGCGGAATCACACCCTGAACGGTTTATCCCCGCTGGCGCGGGGAACACTGAAGCATCAAACATTTGGTGGACCAAACGGACGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP024618|3|1|3892101-3892251|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACTCTTA	CTGCTTGGTATGCGGAATCACACCCTGAA
CGGTTTATCCCCGCTGGCGCGGGGAACACTGA	AGCATCAAACATTTGGTGGACCAAACGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP024618.1\|AUL91647.1\|3890981_3892019_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP024618.1\|AUL91645.1\|3888392_3889820_-\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
CP024618.1\|AUL91646.1\|3889821_3890730_-\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP024618.1\|AUL91651.1\|3896214_3897774_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP024618.1\|AUL91654.1\|3902490_3903225_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP024618.1\|AUL91657.1\|3907126_3907492_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP024618.1\|AUL91641.1\|3886180_3886891_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP024618.1\|AUL91643.1\|3887414_3887738_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371891
CP024618.1\|AUL91653.1\|3902073_3902226_-\|Hok/Gef-family-protein	unknown	unknown	gnl\|CDD\|366840
CP024618.1\|AUL91639.1\|3884655_3885705_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP024618.1\|AUL91650.1\|3894946_3896218_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
CP024618.1\|AUL91652.1\|3899181_3901881_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP024618.1\|AUL91649.1\|3893556_3894207_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP024618.1\|AUL91648.1\|3892347_3892641_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP024618.1\|AUL91638.1\|3883913_3884675_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP024618.1\|AUL91644.1\|3887787_3888393_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP024618.1\|AUL91640.1\|3885701_3886181_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP024618.1\|AUL91655.1\|3903299_3905012_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP024618.1\|AUL91656.1\|3905011_3906811_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP024618.1\|AUL91642.1\|3886909_3887221_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156

Protein	Function_ID	Function_description	E-value
CP024618.1\|AUL91647.1\|3890981_3892019_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP024618.1\|AUL91645.1\|3888392_3889820_-\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP024618.1\|AUL91646.1\|3889821_3890730_-\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP024618.1\|AUL91651.1\|3896214_3897774_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	7.29179e-164
CP024618.1\|AUL91654.1\|3902490_3903225_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.39575e-137
CP024618.1\|AUL91657.1\|3907126_3907492_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	9.8593e-60
CP024618.1\|AUL91641.1\|3886180_3886891_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	5.68505e-122
CP024618.1\|AUL91643.1\|3887414_3887738_-\|hypothetical-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
CP024618.1\|AUL91653.1\|3902073_3902226_-\|Hok/Gef-family-protein	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
CP024618.1\|AUL91639.1\|3884655_3885705_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP024618.1\|AUL91650.1\|3894946_3896218_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	6.42679e-129
CP024618.1\|AUL91652.1\|3899181_3901881_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.03627e-177
CP024618.1\|AUL91649.1\|3893556_3894207_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	5.19362e-90
CP024618.1\|AUL91648.1\|3892347_3892641_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.35543e-65
CP024618.1\|AUL91638.1\|3883913_3884675_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
CP024618.1\|AUL91644.1\|3887787_3888393_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
CP024618.1\|AUL91640.1\|3885701_3886181_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
CP024618.1\|AUL91655.1\|3903299_3905012_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP024618.1\|AUL91656.1\|3905011_3906811_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP024618.1\|AUL91642.1\|3886909_3887221_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62

>CP024618.1|AUL91647.1|3890981_3892019_+|aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALVIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>CP024618.1|AUL91646.1|3889821_3890730_-|sulfate-adenylyltransferase-subunit-2
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFIHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>CP024618.1|AUL91645.1|3888392_3889820_-|sulfate-adenylyltransferase
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>CP024618.1|AUL91644.1|3887787_3888393_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>CP024618.1|AUL91643.1|3887414_3887738_-|hypothetical-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>CP024618.1|AUL91642.1|3886909_3887221_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>CP024618.1|AUL91641.1|3886180_3886891_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAVPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>CP024618.1|AUL91640.1|3885701_3886181_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>CP024618.1|AUL91639.1|3884655_3885705_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQTLLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>CP024618.1|AUL91638.1|3883913_3884675_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>CP024618.1|AUL91648.1|3892347_3892641_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>CP024618.1|AUL91649.1|3893556_3894207_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRQEELQGAFRFFVLSQERPAESETFTIECRPFVSELRTGQSLCFNLRANPTICKAGKRHDLLMEAKRQVKGQAEGRDIWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTAPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>CP024618.1|AUL91650.1|3894946_3896218_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSIVKDEHKVALRKWHEELQDKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVKTVILGGATRLRVSSQSLKRAWRTSELFEQALAGHIGVRSGRIAREAATILIEKGIEDKKAIEWAVEIADYLGKAKKDKKQKNDKKPKDPLTSAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEKDLALLRKDRMAVDIAMFGRMLAKKPGFNVEAACQVAHAFGVSETIVENDFFTAVDDLRQASEDAGAGHVDETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLEVAVQRITTLRENMNTVYEQKTDYASFDVMNKQGSMKDVLDFICA
>CP024618.1|AUL91651.1|3896214_3897774_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDISAPRADLQGAVWQFLLGLLQTSFAPKDHRRWDDIWEDGLEAEKLREALQSLEHAFQFGPDSPSFMQDFDELKVKATSIASLLPDAPGKQTKERNTDHFIKRDTTQHLCLHCVPLALFSIQLNAPIGGRGYYPGLRGGGPLTTLIELLEYQGNQQTPLWRKLWLNVMPQDEADLPLPKTFDDLVFPWLAPTRTSELDGAVVTDEQVNKLQAYWGMPRRIRIDFKTTSIGNCDICGRQSDALLGLMSLKNYGVQYVMWRHPLTPRLPLKEGGDFYSVKPQPGGLIWRDWLGLIEVGNSKNNTELPAQVVKLLNASNLKQTRVGLWGFGFDFEDMKVRCWYEHHFPLLLNKKEDLIPKLRLAAQAASHILSLLHRALKEAWFSEKKTTKLDFGFVDIDFWNKTQHRFLRLVRKIEEGQDPDELLSKWQKEMWLFARQDFDDRVFTNPYEPVDLERVMTARKKYFTTSAEKQNANAAREKKQEAAE
>CP024618.1|AUL91652.1|3899181_3901881_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWEKTRRGEKEGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPEDKAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAHPMDIKGYWQKTLVQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQQGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGTEGQQEAPFLEKDYYPWLTHVTKSDVNSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCTQVIEQSVDIDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEGVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLAICIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRLWCIEQRQDPEMANVILVNDDESCGYSATEGLIGKVG
>CP024618.1|AUL91653.1|3902073_3902226_-|Hok/Gef-family-protein
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>CP024618.1|AUL91654.1|3902490_3903225_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP024618.1|AUL91655.1|3903299_3905012_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>CP024618.1|AUL91656.1|3905011_3906811_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLTELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY
>CP024618.1|AUL91657.1|3907126_3907492_+|6-carboxytetrahydropterin-synthase-QueD
MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE

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Crispr_ID: CP024618_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024618_4

3919701-3919789

Orphan

I-E

Consensus_repeat	Method
GGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024618_4

>merge|CP024618|4|3919701-3919789|CRISPRCasFinder
GGTTTATCCCCGCTGGCGCGGGGAACACAACGCATAGACGGGAAAAGTCTGCTCGATTGGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP024618|4|3|3919701-3919789|CRISPRCasFinder
GGTTTATCCCCGCTGGCGCGGGGAACAC	AACGCATAGACGGGAAAAGTCTGCTCGATTGGC
GGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP024618.1\|AUL91664.1\|3912876_3914331_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
CP024618.1\|AUL91671.1\|3922013_3923312_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
CP024618.1\|AUL91669.1\|3920128_3920800_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP024618.1\|AUL91667.1\|3916807_3918286_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
CP024618.1\|AUL91675.1\|3926461_3926710_-\|antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
CP024618.1\|AUL91663.1\|3911445_3912783_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
CP024618.1\|AUL91659.1\|3908831_3909092_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
CP024618.1\|AUL91666.1\|3915503_3916781_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
CP024618.1\|AUL91673.1\|3925264_3926056_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP024618.1\|AUL91660.1\|3909108_3909684_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
CP024618.1\|AUL91677.1\|3929069_3930371_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
CP024618.1\|AUL91676.1\|3926787_3929022_-\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
CP024618.1\|AUL91670.1\|3920938_3921079_+\|hypothetical-protein	unknown	unknown	unknown
CP024618.1\|AUL91662.1\|3910688_3911468_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
CP024618.1\|AUL91668.1\|3918452_3919147_+\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|281403
CP024618.1\|AUL91674.1\|3926126_3926462_-\|mRNA-interferase-MazF	unknown	unknown	gnl\|CDD\|182138
CP024618.1\|AUL91665.1\|3914400_3915186_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|187605
CP024618.1\|AUL91678.1\|3930427_3933184_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
CP024618.1\|AUL91661.1\|3909831_3910692_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
CP024618.1\|AUL91672.1\|3923399_3925037_-\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437

Protein	Function_ID	Function_description	E-value
CP024618.1\|AUL91664.1\|3912876_3914331_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	8.373e-83
CP024618.1\|AUL91671.1\|3922013_3923312_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP024618.1\|AUL91669.1\|3920128_3920800_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.23739e-155
CP024618.1\|AUL91667.1\|3916807_3918286_+\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.97427e-109
CP024618.1\|AUL91675.1\|3926461_3926710_-\|antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	1.67446e-47
CP024618.1\|AUL91663.1\|3911445_3912783_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.74708e-50
CP024618.1\|AUL91659.1\|3908831_3909092_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	8.55479e-42
CP024618.1\|AUL91666.1\|3915503_3916781_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	2.41032e-29
CP024618.1\|AUL91673.1\|3925264_3926056_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	2.17301e-159
CP024618.1\|AUL91660.1\|3909108_3909684_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
CP024618.1\|AUL91677.1\|3929069_3930371_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
CP024618.1\|AUL91676.1\|3926787_3929022_-\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP024618.1\|AUL91662.1\|3910688_3911468_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.5507e-62
CP024618.1\|AUL91668.1\|3918452_3919147_+\|IS1-family-transposase	gnl\|CDD\|281403	pfam03400, DDE_Tnp_IS1, IS1 transposase. Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases.	7.88437e-84
CP024618.1\|AUL91674.1\|3926126_3926462_-\|mRNA-interferase-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
CP024618.1\|AUL91665.1\|3914400_3915186_-\|oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.14286e-138
CP024618.1\|AUL91678.1\|3930427_3933184_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
CP024618.1\|AUL91661.1\|3909831_3910692_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.34125e-89
CP024618.1\|AUL91672.1\|3923399_3925037_-\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0

>CP024618.1|AUL91668.1|3918452_3919147_+|IS1-family-transposase
MASVNIHCPRCQSAQVYRHGQNPKGRDRFRCRDCHRVFQLTYTYQARKPGMKELITEMAFNGAGVRDTARTLKIGINTVIRTFKKLAPKRITSSPVAHADVALICELDEQWSYVGSKARQHWLWYAYNTKTGGVLAYTFGPRTDQTCRELLALLTPFNIGMLTSDDWGSYGREVPKNKHLTGKIFTQRIERNNLTLRTRIKRLARKTICFSRSVEIHEKVIGAFIEKHMFY
>CP024618.1|AUL91667.1|3916807_3918286_+|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASSVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>CP024618.1|AUL91666.1|3915503_3916781_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>CP024618.1|AUL91665.1|3914400_3915186_-|oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSVKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>CP024618.1|AUL91664.1|3912876_3914331_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMTEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>CP024618.1|AUL91663.1|3911445_3912783_-|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>CP024618.1|AUL91662.1|3910688_3911468_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTIAEKAQKLWQDYLRQRMQP
>CP024618.1|AUL91661.1|3909831_3910692_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPICLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>CP024618.1|AUL91660.1|3909108_3909684_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>CP024618.1|AUL91659.1|3908831_3909092_+|ferredoxin-family-protein
MSVAHNLWRVADAPHIVPADSVERQMVQRLINACPAGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>CP024618.1|AUL91669.1|3920128_3920800_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVISRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>CP024618.1|AUL91670.1|3920938_3921079_+|hypothetical-protein
MLEENKENVFNHVKIPTKLYLFFSVLVFNDNKSKITDAAVNLFIQI
>CP024618.1|AUL91671.1|3922013_3923312_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIALALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP024618.1|AUL91672.1|3923399_3925037_-|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>CP024618.1|AUL91673.1|3925264_3926056_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQIAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>CP024618.1|AUL91674.1|3926126_3926462_-|mRNA-interferase-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>CP024618.1|AUL91675.1|3926461_3926710_-|antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAALVNDITPENLHENIDWGEPKDKEVW
>CP024618.1|AUL91676.1|3926787_3929022_-|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>CP024618.1|AUL91677.1|3929069_3930371_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACLGSLQAIRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>CP024618.1|AUL91678.1|3930427_3933184_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGANIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTLTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGVLLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVLNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG

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Crispr_ID: CP024618_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024618_5

4263111-4263231

Orphan

Consensus_repeat	Method
CACCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024618_5

>merge|CP024618|5|4263111-4263231|CRISPRCasFinder
CACCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCATCAGGTACAAAACACAACAACATCAACAAGTTGAGCACCCCGTAGGCCGGATAAGGTGCGCCAGCATCGCATCCGGCA

>CP024618|5|4|4263111-4263231|CRISPRCasFinder
CACCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCA	TCAGGTACAAAACACAACAACATCAACAAGTTGAG
CACCCCGTAGGCCGGATAAGGTGCGCCAGCATCGCATCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
CP024618.1\|AUL91970.1\|4260743_4261100_+\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|225694
CP024618.1\|AUL91969.1\|4259913_4260608_-\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|281403
CP024618.1\|AUL91968.1\|4259362_4259728_+\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|225694
CP024618.1\|AUL91975.1\|4264589_4265921_-\|transporter	unknown	unknown	gnl\|CDD\|273283
CP024618.1\|AUL91980.1\|4270359_4271568_-\|propionate-kinase	unknown	unknown	gnl\|CDD\|183484
CP024618.1\|AUL91982.1\|4272946_4273936_-\|serine/threonine-dehydratase	unknown	unknown	gnl\|CDD\|236317
CP024618.1\|AUL91981.1\|4271593_4272925_-\|threonine/serine-transporter-TdcC	unknown	unknown	gnl\|CDD\|184191
CP024618.1\|AUL91973.1\|4262875_4263040_+\|hypothetical-protein	unknown	unknown	unknown
CP024618.1\|AUL91965.1\|4257136_4257436_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372871
CP024618.1\|AUL91966.1\|4257531_4258014_+\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
CP024618.1\|AUL91979.1\|4270140_4270326_-\|formate-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
CP024618.1\|AUL91978.1\|4268032_4270141_-\|formate-C-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
CP024618.1\|AUL91971.1\|4261150_4262047_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176122
CP024618.1\|AUL91983.1\|4274034_4274973_-\|transcriptional-regulator-TdcA	unknown	unknown	gnl\|CDD\|182391
CP024618.1\|AUL91976.1\|4266193_4267558_-\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|185000
CP024618.1\|AUL91964.1\|4256742_4257147_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227681
CP024618.1\|AUL91967.1\|4258083_4259070_+\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223512
CP024618.1\|AUL91974.1\|4263251_4264562_-\|serine-dehydratase-subunit-alpha-family-protein	unknown	unknown	gnl\|CDD\|226206
CP024618.1\|AUL91977.1\|4267629_4268019_-\|reactive-intermediate/imine-deaminase	unknown	unknown	gnl\|CDD\|105214
CP024618.1\|AUL91972.1\|4262151_4262853_+\|pirin-like-protein-YhaK	unknown	unknown	gnl\|CDD\|224655

Protein	Function_ID	Function_description	E-value
CP024618.1\|AUL91970.1\|4260743_4261100_+\|DUF805-domain-containing-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	1.17161e-38
CP024618.1\|AUL91969.1\|4259913_4260608_-\|IS1-family-transposase	gnl\|CDD\|281403	pfam03400, DDE_Tnp_IS1, IS1 transposase. Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases.	7.88437e-84
CP024618.1\|AUL91968.1\|4259362_4259728_+\|DUF805-domain-containing-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	3.68376e-42
CP024618.1\|AUL91975.1\|4264589_4265921_-\|transporter	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	2.53913e-167
CP024618.1\|AUL91980.1\|4270359_4271568_-\|propionate-kinase	gnl\|CDD\|183484	PRK12379, PRK12379, propionate kinase.	0
CP024618.1\|AUL91982.1\|4272946_4273936_-\|serine/threonine-dehydratase	gnl\|CDD\|236317	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB.	0
CP024618.1\|AUL91981.1\|4271593_4272925_-\|threonine/serine-transporter-TdcC	gnl\|CDD\|184191	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional.	0
CP024618.1\|AUL91965.1\|4257136_4257436_+\|hypothetical-protein	gnl\|CDD\|372871	pfam13997, YqjK, YqjK-like protein. The YqjK-like protein family includes the E. coli YqjK protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length. There is a single completely conserved residue R that may be functionally important.	6.11451e-20
CP024618.1\|AUL91966.1\|4257531_4258014_+\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	5.63883e-30
CP024618.1\|AUL91979.1\|4270140_4270326_-\|formate-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	1.28474e-24
CP024618.1\|AUL91978.1\|4268032_4270141_-\|formate-C-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
CP024618.1\|AUL91971.1\|4261150_4262047_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176122	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold. HupR, a member of the LysR family, activates hupA transcription under low-iron conditions in the presence of hemin. The expression of many iron-uptake genes, such as hupA, is regulated at the transcriptional level by iron and an iron-binding repressor protein called Fur (ferric uptake regulation). Under iron-abundant conditions with heme, the active Fur repressor protein represses transcription of the iron-uptake gene hupA, and prevents transcriptional activation via HupR. Under low-iron conditions with heme, the Fur repressor is inactive and transcription of the hupA is allowed. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.2986e-51
CP024618.1\|AUL91983.1\|4274034_4274973_-\|transcriptional-regulator-TdcA	gnl\|CDD\|182391	PRK10341, PRK10341, transcriptional regulator TdcA.	0
CP024618.1\|AUL91976.1\|4266193_4267558_-\|L-serine-ammonia-lyase	gnl\|CDD\|185000	PRK15040, PRK15040, L-serine ammonia-lyase.	0
CP024618.1\|AUL91964.1\|4256742_4257147_+\|hypothetical-protein	gnl\|CDD\|227681	COG5393, COG5393, Predicted membrane protein [Function unknown].	2.73939e-60
CP024618.1\|AUL91967.1\|4258083_4259070_+\|glutathione-S-transferase-family-protein	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	0
CP024618.1\|AUL91974.1\|4263251_4264562_-\|serine-dehydratase-subunit-alpha-family-protein	gnl\|CDD\|226206	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism].	0
CP024618.1\|AUL91977.1\|4267629_4268019_-\|reactive-intermediate/imine-deaminase	gnl\|CDD\|105214	PRK11401, PRK11401, enamine/imine deaminase.	2.43767e-83
CP024618.1\|AUL91972.1\|4262151_4262853_+\|pirin-like-protein-YhaK	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	6.08497e-67

>CP024618.1|AUL91973.1|4262875_4263040_+|hypothetical-protein
MSKKSAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAETRLAEDEATA
>CP024618.1|AUL91972.1|4262151_4262853_+|pirin-like-protein-YhaK
MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSDHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVWLHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV
>CP024618.1|AUL91971.1|4261150_4262047_-|LysR-family-transcriptional-regulator
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFSGK
>CP024618.1|AUL91970.1|4260743_4261100_+|DUF805-domain-containing-protein
MQWYLSVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLILGLELPYLSMLYLLATFLPVLALAIRRLHDTDRSGAWALLFFVPFIGWLVLLVFFCTEGTSGSNRYGNDPKFGSN
>CP024618.1|AUL91969.1|4259913_4260608_-|IS1-family-transposase
MASVNIHCPRCQSAQVYRHGQNPKGRDRFRCRDCHRVFQLTYTYQARKPGMKELITEMAFNGAGVRDTARTLKIGINTVIRTFKKLAPKRITSSPVAHADVALICELDEQWSYVGSKARQHWLWYAYNTKTGGVLAYTFGPRTDQTCRELLALLTPFNIGMLTSDDWGSYGREVPKNKHLTGKIFTQRIERNNLTLRTRIKRLARKTICFSRSVEIHEKVIGAFIEKHMFY
>CP024618.1|AUL91968.1|4259362_4259728_+|DUF805-domain-containing-protein
MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEP
>CP024618.1|AUL91967.1|4258083_4259070_+|glutathione-S-transferase-family-protein
MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQHEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG
>CP024618.1|AUL91966.1|4257531_4258014_+|DoxX-family-protein
MIHSIDSNDANTAPLHKKTISSLSGAVESMMKKLEDVGVLVARILMPILFITAGWGKITAYSGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW
>CP024618.1|AUL91965.1|4257136_4257436_+|hypothetical-protein
MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWNMLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG
>CP024618.1|AUL91964.1|4256742_4257147_+|hypothetical-protein
MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEKANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIWTLRKSRKSTLLRHTRHELANDRQLLEEESREQ
>CP024618.1|AUL91974.1|4263251_4264562_-|serine-dehydratase-subunit-alpha-family-protein
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNGVVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR
>CP024618.1|AUL91975.1|4264589_4265921_-|transporter
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS
>CP024618.1|AUL91976.1|4266193_4267558_-|L-serine-ammonia-lyase
MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGTHIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
>CP024618.1|AUL91977.1|4267629_4268019_-|reactive-intermediate/imine-deaminase
MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA
>CP024618.1|AUL91978.1|4268032_4270141_-|formate-C-acetyltransferase
MEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIVGLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEIGEDLEATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFKAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDGEYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKEDPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREMLLDAIEHPEKYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAL
>CP024618.1|AUL91979.1|4270140_4270326_-|formate-acetyltransferase
MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGDESFLAEATPATTELWEK
>CP024618.1|AUL91980.1|4270359_4271568_-|propionate-kinase
MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAFLSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITDEVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLPWKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLIRRLVMEHLAVLGVEIDTEMNNRSNSCGERIVSSENARVICAVIPTNEEKMIALDAIHLGKVNAPAEFA
>CP024618.1|AUL91981.1|4271593_4272925_-|threonine/serine-transporter-TdcC
MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSKPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLILKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF
>CP024618.1|AUL91982.1|4272946_4273936_-|serine/threonine-dehydratase
MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA
>CP024618.1|AUL91983.1|4274034_4274973_-|transcriptional-regulator-TdcA
MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKTASVLVELAKEYSSYNGCRRRQLIEVG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP024618_1	1.1\|562474\|54\|CP024618\|CRISPRCasFinder	562474-562527	54	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	165411-165464	1	0.981
CP024618_2	2.1\|1623921\|40\|CP024618\|CRISPRCasFinder	1623921-1623960	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	1	0.975
CP024618_3	3.2\|3892194\|29\|CP024618\|PILER-CR	3892194-3892222	29	JN882286	Cronobacter phage vB_CsaP_GAP52, complete genome	19327-19355	6	0.793
CP024618_3	3.2\|3892194\|29\|CP024618\|PILER-CR	3892194-3892222	29	MK448454	Streptococcus satellite phage Javan361, complete genome	9192-9220	7	0.759
CP024618_1	1.1\|562474\|54\|CP024618\|CRISPRCasFinder	562474-562527	54	NZ_CP048385	Citrobacter freundii strain 62 plasmid p6_C, complete sequence	72431-72484	12	0.778

1. spacer 1.1|562474|54|CP024618|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.981

gaatgccggatgcgctttgcttatccggcctacaaaatcgcagcgtgtaggcca	CRISPR spacer
caatgccggatgcgctttgcttatccggcctacaaaatcgcagcgtgtaggcca	Protospacer
 *****************************************************

2. spacer 2.1|1623921|40|CP024618|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

acagcacagcggggggaatttcaagaatgacccgcagcgc	CRISPR spacer
acagcacagcgggggtaatttcaagaatgacccgcagcgc	Protospacer
*************** ************************

3. spacer 3.2|3892194|29|CP024618|PILER-CR matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 6, identity: 0.793

tgaagcatcaaacatttggtg--gaccaaac	CRISPR spacer
tgaagcaccaaacatttggtgtcgggtaa--	Protospacer
*******.*************  *. .**

4. spacer 3.2|3892194|29|CP024618|PILER-CR matches to MK448454 (Streptococcus satellite phage Javan361, complete genome) position: , mismatch: 7, identity: 0.759

tgaagcatcaaacatttggtggaccaaac	CRISPR spacer
tgaagaatcaaaaatttggtggattgata	Protospacer
***** ****** **********...*

5. spacer 1.1|562474|54|CP024618|CRISPRCasFinder matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 12, identity: 0.778

gaatgccggatgcgctttgcttatccggcctacaaaatcgc-----agcgtgtaggcca	CRISPR spacer
tactgccggatgcgctttgcttatccggcctacaataccgcgaattaatttgta-----	Protospacer
 * ******************************** *.***     *.. ****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 8130

Escherichia_phage(41.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL88035.1\|0_552_+	hypothetical protein	A0A291AWW8	Escherichia_phage	4.5e-101	100.0
AUL92906.1\|698_878_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	5.0e-30	94.9
AUL88036.1\|840_1386_+	immunity protein	Q8SBF3	Shigella_phage	4.0e-94	98.9
AUL92907.1\|1390_1615_+	hypothetical protein	A0A291AX25	Escherichia_phage	8.5e-35	94.6
AUL88037.1\|1611_2418_+	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	7.9e-123	88.1
AUL88038.1\|2512_3166_+	phage N-6-adenine-methyltransferase	Q8SBE9	Shigella_phage	3.3e-127	99.5
AUL88039.1\|3162_3558_+	RusA family crossover junction endodeoxyribonuclease	A5LH74	Enterobacteria_phage	9.1e-64	96.0
AUL88040.1\|3720_4536_+	DNA-binding protein	U5P4K5	Shigella_phage	2.9e-149	99.6
AUL88041.1\|4543_5533_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.7e-194	99.4
AUL88042.1\|5550_5916_+	antitermination protein	Q777W5	Enterobacteria_phage	7.9e-54	81.8
AUL88043.1\|6000_6447_-	hypothetical protein	NA	NA	NA	NA
AUL88044.1\|6717_6921_+	hypothetical protein	A0A291AWX6	Escherichia_phage	1.8e-31	98.5
AUL88045.1\|7071_8130_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	4.9e-181	86.7

DBSCAN-SWA_2

11852 : 43627

Stx2-converting_phage(55.56%)

lysis,transposase,tail,integrase,terminase,holin

attL 24561:24620|attR 43583:44348

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL88047.1\|11852_12068_+\|holin	holin	Q6H9V8	Enterobacteria_phage	7.7e-33	98.6
AUL88048.1\|12072_12417_+	DUF1327 domain-containing protein	A0A0P0ZD64	Stx2-converting_phage	1.0e-58	100.0
AUL88049.1\|12467_13001_+	lysozyme	A0A0N7KZF9	Stx2-converting_phage	2.8e-100	98.3
AUL88050.1\|13296_13764_+\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	1.8e-74	96.1
AUL88051.1\|14126_14354_-	DUF3950 domain-containing protein	A0A0P0ZCA1	Stx2-converting_phage	3.9e-35	100.0
AUL88052.1\|14395_14761_+	HNH endonuclease	A0A0P0ZCH0	Stx2-converting_phage	2.0e-65	100.0
AUL88053.1\|15048_15612_+\|terminase	terminase small subunit	A0A0P0ZDD1	Stx2-converting_phage	4.7e-90	100.0
AUL88054.1\|15608_15872_+	hypothetical protein	A0A0N7KZG0	Stx2-converting_phage	3.7e-45	100.0
AUL92908.1\|16841_19352_+\|tail	phage tail protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	95.7
AUL88055.1\|19418_20018_+	Ail/Lom family protein	A0A0P0ZCF6	Stx2-converting_phage	2.0e-110	99.5
AUL88056.1\|21395_21665_+\|tail	phage tail protein	Q6H9S8	Enterobacteria_phage	1.9e-44	98.9
AUL92909.1\|23351_23681_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	1.7e-31	61.5
AUL88057.1\|23858_24575_-	DUF4765 domain-containing protein	A0A0N7KZG3	Stx2-converting_phage	6.6e-129	100.0
24561:24620	attL	NA	NA	NA	NA
AUL88058.1\|24574_25269_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL88059.1\|25304_28019_-	DUF4765 domain-containing protein	A0A0N7KZG3	Stx2-converting_phage	0.0e+00	100.0
AUL88060.1\|30363_31347_-	quinone oxidoreductase	NA	NA	NA	NA
AUL88061.1\|31429_32845_+	replicative DNA helicase	O80281	Escherichia_phage	4.8e-200	78.3
AUL88062.1\|32897_33977_+	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	4.0e-29	27.9
AUL88063.1\|34229_35423_+	aromatic amino acid transaminase	NA	NA	NA	NA
AUL88064.1\|36548_37262_+	acid phosphatase AphA	NA	NA	NA	NA
AUL88065.1\|37372_37789_+	thiamine phosphate synthase	NA	NA	NA	NA
AUL88066.1\|37792_38149_+	hypothetical protein	NA	NA	NA	NA
AUL88067.1\|38183_41006_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	56.1
AUL88068.1\|40956_41139_+	hypothetical protein	NA	NA	NA	NA
AUL88069.1\|41260_41797_+	ssDNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	1.1e-56	78.7
AUL88070.1\|41895_42177_-	hypothetical protein	NA	NA	NA	NA
AUL88071.1\|42135_42282_+\|integrase	integrase	NA	NA	NA	NA
AUL88072.1\|42933_43627_+\|transposase	IS1 family transposase	NA	NA	NA	NA
43583:44348	attR	NA	NA	NA	NA

DBSCAN-SWA_3

274409 : 381784

Stx2-converting_phage(26.32%)

transposase,integrase,tail,tRNA,protease

attL 309030:309089|attR 381783:382549

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL88287.1\|274409_275762_+\|protease	metalloprotease PmbA	NA	NA	NA	NA
AUL88288.1\|275816_276203_+	cytochrome b562	NA	NA	NA	NA
AUL88289.1\|276247_276712_-	anaerobic ribonucleoside-triphosphate reductase activating protein	K4F9T1	Cronobacter_phage	3.8e-53	57.7
AUL88290.1\|276870_279009_-	anaerobic ribonucleoside triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	1.5e-266	64.5
AUL88291.1\|279402_281058_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
AUL88292.1\|281107_282529_-	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
AUL88293.1\|282647_283595_-	HTH-type transcriptional regulator TreR	C6ZCU4	Enterobacteria_phage	7.9e-13	21.8
AUL88294.1\|283973_286670_+	magnesium-translocating P-type ATPase	M1HLC0	Paramecium_bursaria_Chlorella_virus	9.0e-46	27.4
AUL88295.1\|286875_287262_-	reactive intermediate/imine deaminase	NA	NA	NA	NA
AUL88296.1\|287334_287796_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
AUL88297.1\|287808_288744_-	aspartate carbamoyltransferase catalytic subunit	M1HWF9	Paramecium_bursaria_Chlorella_virus	2.9e-52	40.2
AUL88298.1\|288747_288882_-	pyrBI operon leader peptide	NA	NA	NA	NA
AUL88299.1\|289011_289194_+	hypothetical protein	NA	NA	NA	NA
AUL88300.1\|289162_289558_-	hypothetical protein	NA	NA	NA	NA
AUL88301.1\|289688_290402_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AUL88302.1\|290472_291066_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AUL88303.1\|291785_293414_+	DNA-binding protein	NA	NA	NA	NA
AUL88304.1\|293486_294491_-	ornithine carbamoyltransferase	NA	NA	NA	NA
AUL88305.1\|294652_295069_+	regulator of ribonuclease activity B	NA	NA	NA	NA
AUL88306.1\|295114_295618_-	N-acetyltransferase	NA	NA	NA	NA
AUL88307.1\|295810_297007_+	DUF898 domain-containing protein	NA	NA	NA	NA
AUL88308.1\|297062_299918_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	7.9e-141	36.7
AUL92917.1\|299917_300361_-	DNA polymerase III subunit chi	NA	NA	NA	NA
AUL88309.1\|300494_302006_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	1.0e-46	38.0
AUL88310.1\|302272_303373_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA
AUL88311.1\|303372_304455_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
AUL88312.1\|306248_307268_-	NAD(P)-dependent alcohol dehydrogenase	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	2.4e-44	30.1
AUL88313.1\|307734_308997_+\|integrase	integrase	Q7M297	Enterobacteria_phage	1.7e-79	38.2
309030:309089	attL	NA	NA	NA	NA
AUL88314.1\|309087_309781_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL88315.1\|311144_315134_+	autotransporter outer membrane beta-barrel domain-containing protein	Q9LA58	Enterobacterial_phage	5.2e-308	45.1
AUL88316.1\|315747_316442_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL88317.1\|316535_316898_+	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
AUL88318.1\|316963_317788_+	DUF2303 domain-containing protein	A0A0P0ZBZ4	Stx2-converting_phage	2.7e-150	100.0
AUL88319.1\|317915_318452_+	HD family hydrolase	A0A0P0ZCH9	Stx2-converting_phage	9.7e-101	100.0
AUL88320.1\|318442_318793_+	Eae protein	A0A0P0ZBF8	Stx2-converting_phage	7.0e-60	100.0
AUL88321.1\|319920_320055_+	hypothetical protein	A0A0P0ZDP5	Stx2-converting_phage	4.9e-22	100.0
AUL88322.1\|320073_320328_+	excisionase	Q859D3	Escherichia_coli_phage	3.0e-44	100.0
AUL88323.1\|320361_321648_+\|integrase	site-specific integrase	A0A0N7KZF5	Stx2-converting_phage	5.8e-253	100.0
AUL88324.1\|321792_322878_+	hypothetical protein	A0A0C4UQU9	Shigella_phage	1.1e-98	53.2
AUL88325.1\|322868_323429_+	DUF2313 domain-containing protein	C9DGQ7	Escherichia_phage	3.9e-44	49.1
AUL88326.1\|323428_324340_+\|tail	phage tail protein	C9DGQ8	Escherichia_phage	6.4e-28	39.5
AUL92918.1\|324374_324896_-\|tail	phage tail protein	A0A0U2QV64	Escherichia_phage	2.1e-47	52.6
AUL92919.1\|324975_325179_-\|tail	phage tail protein	NA	NA	NA	NA
AUL88327.1\|325201_325387_+	hypothetical protein	NA	NA	NA	NA
AUL88328.1\|328077_328275_+	envelope stress response protein PspG	NA	NA	NA	NA
AUL88329.1\|328358_329096_-	protein mom	A0A0C4UQZ7	Shigella_phage	7.5e-104	79.0
AUL88330.1\|329049_329250_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
AUL88331.1\|329859_330105_-	DUF826 domain-containing protein	NA	NA	NA	NA
AUL88332.1\|330245_330903_-\|transposase	IS1 family transposase	A0A0U2RK18	Escherichia_phage	8.2e-126	99.1
AUL88333.1\|330942_331089_-	DUF1378 domain-containing protein	A0A2R2Z345	Escherichia_phage	1.9e-06	55.3
AUL88334.1\|331906_332095_-	hypothetical protein	NA	NA	NA	NA
AUL88335.1\|335808_336189_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
AUL88336.1\|336287_336503_+	DinI family protein	Q687E4	Enterobacteria_phage	1.9e-31	98.6
AUL88337.1\|336874_337861_-	peptidase M85	NA	NA	NA	NA
AUL88338.1\|337889_338081_-	hypothetical protein	NA	NA	NA	NA
AUL88339.1\|338290_338560_-\|tail	phage tail protein	H6WZN0	Escherichia_phage	1.9e-44	97.8
AUL88340.1\|338561_339875_-\|tail	phage tail protein	A0A0P0ZE15	Stx2-converting_phage	3.6e-80	97.9
AUL88341.1\|339939_340539_-	Ail/Lom family protein	A0A0P0ZCF6	Stx2-converting_phage	5.9e-107	97.0
AUL88342.1\|340605_344085_-\|tail	phage tail protein	B6DZB5	Enterobacteria_phage	0.0e+00	96.5
AUL88343.1\|344321_345002_-\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	1.6e-108	91.1
AUL88344.1\|344899_345643_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	9.8e-144	96.3
AUL88345.1\|346350_346692_-\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	4.7e-61	97.3
AUL88346.1\|347600_348446_-	hypothetical protein	A0A0P0ZCJ4	Stx2-converting_phage	1.1e-117	99.2
AUL88347.1\|349964_350093_-\|tail	phage tail protein	H6WZM0	Escherichia_phage	2.5e-15	100.0
AUL88348.1\|350169_350864_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL88349.1\|350925_351576_+	molecular chaperone FimC	NA	NA	NA	NA
AUL88350.1\|351642_354279_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
AUL88351.1\|354288_354819_+	protein FimF	NA	NA	NA	NA
AUL88352.1\|354831_355335_+	protein FimG	NA	NA	NA	NA
AUL92920.1\|355354_356257_+	fimbrial protein	NA	NA	NA	NA
AUL88353.1\|356429_357773_-	gluconate transporter	NA	NA	NA	NA
AUL88354.1\|357852_358161_+	hypothetical protein	NA	NA	NA	NA
AUL88355.1\|358112_359297_+	mannonate dehydratase	NA	NA	NA	NA
AUL88356.1\|359377_360838_+	fructuronate reductase	H8ZJP8	Ostreococcus_tauri_virus	1.9e-50	32.4
AUL88357.1\|360859_361054_-	hypothetical protein	NA	NA	NA	NA
AUL88358.1\|361052_361826_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUL88359.1\|361966_362794_-	DUF2686 domain-containing protein	NA	NA	NA	NA
AUL88360.1\|363357_363501_+	hypothetical protein	NA	NA	NA	NA
AUL88361.1\|363466_363859_+	anti-adapter protein IraD	NA	NA	NA	NA
AUL88362.1\|363851_364763_-	transcriptional regulator	NA	NA	NA	NA
AUL88363.1\|364827_366000_-	beta-aspartyl-peptidase	NA	NA	NA	NA
AUL88364.1\|366012_366474_-	hypothetical protein	NA	NA	NA	NA
AUL88365.1\|366470_367154_-	hypothetical protein	NA	NA	NA	NA
AUL88366.1\|367403_367958_+	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	2.0e-37	45.6
AUL88367.1\|367970_369149_-	MFS transporter	NA	NA	NA	NA
AUL88368.1\|369216_370077_-	hypothetical protein	NA	NA	NA	NA
AUL88369.1\|370141_370399_-	DUF3343 domain-containing protein	NA	NA	NA	NA
AUL88370.1\|370395_371163_-	hypothetical protein	NA	NA	NA	NA
AUL88371.1\|371172_372324_-	hypothetical protein	NA	NA	NA	NA
AUL88372.1\|372439_373720_-	DUF445 domain-containing protein	NA	NA	NA	NA
AUL88373.1\|373760_374993_-	MFS transporter	NA	NA	NA	NA
AUL88374.1\|375250_375463_+	hypothetical protein	NA	NA	NA	NA
AUL88375.1\|375459_376404_+	hypothetical protein	Q2A0A7	Sodalis_phage	5.9e-61	51.7
AUL88376.1\|376646_378059_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AUL88377.1\|378235_378400_+	DUF1127 domain-containing protein	NA	NA	NA	NA
AUL88378.1\|378497_380591_+	hypothetical protein	NA	NA	NA	NA
AUL88379.1\|380637_380979_-	endoribonuclease SymE	NA	NA	NA	NA
AUL88380.1\|381089_381784_-\|transposase	IS1 family transposase	NA	NA	NA	NA
381783:382549	attR	NA	NA	NA	NA

DBSCAN-SWA_4

405706 : 495242

Escherichia_phage(39.68%)

lysis,transposase,head,integrase,tail,terminase,tRNA,capsid,holin

attL 405494:405509|attR 439510:439525

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
405494:405509	attL	NA	NA	NA	NA
AUL88398.1\|405706_406401_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL88399.1\|406561_407287_+	DNA-binding response regulator	NA	NA	NA	NA
AUL88400.1\|407244_407922_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AUL88401.1\|407958_408747_-	hydroxamate siderophore iron reductase FhuF	NA	NA	NA	NA
AUL88402.1\|408848_409124_+	DUF1435 domain-containing protein	NA	NA	NA	NA
AUL88403.1\|409684_410716_-	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA	NA	NA	NA
AUL88404.1\|410818_411232_+	DNA polymerase III subunit psi	NA	NA	NA	NA
AUL88405.1\|411200_411647_+	ribosomal-protein-alanine N-acetyltransferase RimI	NA	NA	NA	NA
AUL88406.1\|411661_412339_+	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA
AUL88407.1\|412724_413948_+\|integrase	integrase	A0A291AWU1	Escherichia_phage	1.3e-233	98.0
AUL92923.1\|414119_415025_-	hypothetical protein	NA	NA	NA	NA
AUL88408.1\|415898_416093_-	DNA-binding protein	A5LH59	Enterobacteria_phage	5.8e-32	98.4
AUL92924.1\|416092_416425_-	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	1.5e-43	100.0
AUL88409.1\|416927_417614_-	hypothetical protein	H6WZG2	Escherichia_phage	3.7e-121	87.1
AUL88410.1\|417610_417832_-	conjugal transfer protein TraR	A0A1I9LJM6	Stx_converting_phage	2.9e-35	100.0
AUL88411.1\|417930_418212_-	cell division protein ZapA	Q6H9Z3	Enterobacteria_phage	3.2e-47	100.0
AUL88412.1\|418222_418414_-	hypothetical protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
AUL88413.1\|418391_418568_-	DUF1317 domain-containing protein	A0A0P0ZAS9	Stx2-converting_phage	1.3e-22	100.0
AUL88414.1\|418564_419245_-	exonuclease	A0A0P0ZFI7	Escherichia_phage	1.9e-130	98.2
AUL88415.1\|419241_420192_-	recombinase RecT	A0A0P0ZFY9	Escherichia_phage	2.0e-173	96.8
AUL88416.1\|420208_420490_-	hypothetical protein	A0A0P0ZFG3	Escherichia_phage	1.1e-47	100.0
AUL88417.1\|420510_420792_-	AbrB family transcriptional regulator	A0A0P0ZGC3	Escherichia_phage	3.0e-45	100.0
AUL88418.1\|420803_421016_-	cell division inhibitor protein	A0A0P0ZGD1	Escherichia_phage	5.8e-33	100.0
AUL88419.1\|421086_421986_-	hypothetical protein	A0A0P0ZG86	Escherichia_phage	1.4e-139	96.2
AUL88420.1\|422489_423443_-	restriction endonuclease	A0A0P0ZG22	Escherichia_phage	7.0e-187	100.0
AUL88421.1\|423439_424909_-	SAM-dependent methyltransferase	A0A2L1IV91	Escherichia_phage	1.9e-284	99.6
AUL88422.1\|425003_425717_-	LexA family transcriptional repressor	A0A2R2X2B0	Escherichia_phage	6.3e-132	100.0
AUL88423.1\|425812_426016_+	Cro/Cl family transcriptional regulator	A0A2R2Z333	Escherichia_phage	9.8e-30	98.5
AUL88424.1\|426186_426381_+	hypothetical protein	NA	NA	NA	NA
AUL88425.1\|426547_426925_+	hypothetical protein	A0A2R2Z329	Escherichia_phage	7.6e-60	98.4
AUL88426.1\|426918_428439_+	ATP-dependent helicase	A0A2R2Z335	Escherichia_phage	8.3e-307	99.8
AUL88427.1\|428428_429400_+	DNA primase	A0A0H4IPK0	Shigella_phage	1.9e-195	100.0
AUL88428.1\|429399_429849_+	DUF1367 domain-containing protein	A0A0P0ZFW0	Escherichia_phage	7.6e-83	100.0
AUL88429.1\|429856_430420_+	recombination protein NinG	A0A0P0ZG59	Escherichia_phage	8.9e-105	100.0
AUL88430.1\|430416_430611_+	protein ninH	A0A0P0ZGE1	Escherichia_phage	1.4e-30	98.4
AUL88431.1\|430603_431038_+	antitermination protein	A0A0P0ZGJ3	Escherichia_phage	4.8e-82	100.0
AUL88432.1\|431026_431272_-	hypothetical protein	A0A0P0ZGS0	Escherichia_phage	5.0e-36	100.0
AUL88433.1\|431286_431439_+	DNA methylase	A0A2R2Z327	Escherichia_phage	4.0e-20	100.0
AUL88434.1\|431827_432787_+	Shiga toxin Stx2 subunit A	Q5TJL6	Enterobacteria_phage	9.6e-176	99.7
AUL88435.1\|432798_433068_+	Shiga toxin Stx2 subunit B	Q5TJL5	Enterobacteria_phage	2.1e-43	100.0
AUL88436.1\|433364_433688_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	6.9e-62	100.0
AUL88437.1\|433875_434570_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL88438.1\|434705_436643_+	sialate O-acetylesterase	A0A0P0ZBP4	Stx2-converting_phage	0.0e+00	99.1
AUL88439.1\|436779_436959_+	DUF1378 domain-containing protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
AUL88440.1\|436999_437272_+	DUF826 domain-containing protein	A0A0P0ZBB8	Stx2-converting_phage	2.2e-21	100.0
AUL88441.1\|437348_437564_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.0e-33	100.0
AUL88442.1\|437563_438061_+	lysozyme	A0A0N7KZA0	Stx2-converting_phage	2.4e-90	97.0
AUL88443.1\|438057_438495_+\|lysis	lysis protein	A0A0P0ZBQ9	Stx2-converting_phage	4.2e-70	96.6
AUL88444.1\|438697_439195_+	DNA-binding protein	A0A0P0ZBU2	Stx2-converting_phage	3.6e-94	100.0
AUL88445.1\|439191_439449_+	hypothetical protein	A0A0P0ZBT1	Stx2-converting_phage	5.0e-39	100.0
AUL88446.1\|439525_439660_-	hypothetical protein	NA	NA	NA	NA
439510:439525	attR	NA	NA	NA	NA
AUL88447.1\|439911_440139_-	DUF3950 domain-containing protein	A0A0P0ZE23	Stx2-converting_phage	1.7e-35	100.0
AUL88448.1\|440180_440546_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	4.0e-66	99.2
AUL92925.1\|440514_440652_+	DNase	H6WZK7	Escherichia_phage	8.6e-06	75.0
AUL88449.1\|440835_441399_+\|terminase	terminase small subunit	A0A0P0ZDD1	Stx2-converting_phage	4.7e-90	100.0
AUL88450.1\|443119_445057_+\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	99.5
AUL92926.1\|445101_445323_+	hypothetical protein	A0A0P0ZD92	Stx2-converting_phage	5.8e-36	100.0
AUL88451.1\|448184_448535_+\|head,tail	head-tail adaptor protein	A0A0P0ZB28	Stx2-converting_phage	1.0e-58	99.1
AUL88452.1\|448531_448978_+	hypothetical protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
AUL88453.1\|448974_449319_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
AUL88454.1\|450512_450794_+	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	2.3e-45	98.9
AUL88455.1\|454073_454415_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	4.7e-61	97.3
AUL88456.1\|454414_455113_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	2.0e-130	97.8
AUL88457.1\|456667_457507_+\|tail	phage tail protein	A0A0P0ZBW1	Stx2-converting_phage	5.0e-152	97.8
AUL88458.1\|457630_460144_+\|tail	phage tail protein	B6DZB5	Enterobacteria_phage	0.0e+00	95.8
AUL88459.1\|460210_460810_+	Ail/Lom family protein	A0A0P0ZCF6	Stx2-converting_phage	5.9e-107	97.0
AUL88460.1\|462188_462458_+\|tail	phage tail protein	H6WZN0	Escherichia_phage	3.8e-45	100.0
AUL88461.1\|462826_463075_-	damage-inducible protein DinI	A5LH55	Enterobacteria_phage	1.1e-38	100.0
AUL88462.1\|463294_464881_+	peptide chain release factor 3	D0R0F5	Streptococcus_phage	5.3e-30	24.9
AUL88463.1\|465273_465879_+	molecular chaperone OsmY	NA	NA	NA	NA
AUL88464.1\|465987_466167_+	DUF1328 domain-containing protein	A0A0N7CBR2	Salmonella_phage	2.0e-10	64.2
AUL88465.1\|466288_467362_+	patatin family protein	NA	NA	NA	NA
AUL88466.1\|467358_468141_+	metal-dependent hydrolase	NA	NA	NA	NA
AUL88467.1\|469088_470639_-	YjjI family glycine radical enzyme	NA	NA	NA	NA
AUL88468.1\|470897_471677_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA
AUL88469.1\|471843_473166_+	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	6.8e-79	39.8
AUL88470.1\|473217_474441_+	phosphopentomutase	NA	NA	NA	NA
AUL88471.1\|474497_475217_+	purine-nucleoside phosphorylase	NA	NA	NA	NA
AUL88472.1\|475383_476715_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AUL88473.1\|476715_477732_-	lipoate-protein ligase LplA	NA	NA	NA	NA
AUL88474.1\|477759_478404_-	hypothetical protein	NA	NA	NA	NA
AUL88475.1\|478509_479478_+	phosphoserine phosphatase	NA	NA	NA	NA
AUL88476.1\|479526_480909_+	DNA repair protein RadA	NA	NA	NA	NA
AUL88477.1\|480929_482162_+	trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR	A0A0C5K935	Enterococcus_phage	2.1e-82	42.6
AUL88478.1\|482468_484136_-	energy-dependent translational throttle protein EttA	A0A1V0SKJ1	Klosneuvirus	3.7e-42	26.4
AUL92927.1\|484109_484238_+	methionine aminopeptidase	NA	NA	NA	NA
AUL88479.1\|484346_486284_+	murein transglycosylase	A0A1P8CWQ1	Bacillus_phage	2.3e-11	35.7
AUL88480.1\|486373_486700_+	Trp operon repressor	NA	NA	NA	NA
AUL92928.1\|486846_487359_-	non-canonical purine NTP phosphatase	NA	NA	NA	NA
AUL88481.1\|487410_488058_+	phosphoglycerate mutase	NA	NA	NA	NA
AUL88482.1\|488054_488924_-	right origin-binding protein	NA	NA	NA	NA
AUL88483.1\|489134_489608_+	protein CreA	NA	NA	NA	NA
AUL88484.1\|489620_490310_+	two-component system response regulator CreB	W8CYM9	Bacillus_phage	8.8e-30	35.3
AUL88485.1\|490309_491734_+	two-component system sensor histidine kinase CreC	Q8QKV7	Ectocarpus_siliculosus_virus	3.6e-09	20.4
AUL88486.1\|491791_493144_+	cell envelope integrity protein CreD	NA	NA	NA	NA
AUL88487.1\|493203_493920_-	DNA-binding response regulator	NA	NA	NA	NA
AUL88488.1\|494015_494156_+	hypothetical protein	NA	NA	NA	NA
AUL88489.1\|494555_495242_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_5

676218 : 753424

uncultured_Mediterranean_phage(12.5%)

plate,tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL88641.1\|676218_677643_+\|protease	periplasmic serine endoprotease DegP	A0A1B1IT49	uncultured_Mediterranean_phage	1.9e-26	28.8
AUL88642.1\|677797_678955_+	carbohydrate diacid regulon transcriptional regulator CdaR	NA	NA	NA	NA
AUL88643.1\|679043_679430_-	hypothetical protein	NA	NA	NA	NA
AUL88644.1\|679744_680569_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
AUL88645.1\|680599_683272_-	bifunctional uridylyltransferase/uridylyl-removing protein GlnD	NA	NA	NA	NA
AUL88646.1\|683333_684128_-	methionine aminopeptidase	NA	NA	NA	NA
AUL88647.1\|684495_685221_+	30S ribosomal protein S2	NA	NA	NA	NA
AUL88648.1\|685172_685460_-	hypothetical protein	NA	NA	NA	NA
AUL88649.1\|685478_686330_+	elongation factor Ts	NA	NA	NA	NA
AUL88650.1\|686476_687202_+	UMP kinase	NA	NA	NA	NA
AUL88651.1\|687493_688051_+	ribosome-recycling factor	NA	NA	NA	NA
AUL88652.1\|688142_689339_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
AUL88653.1\|689527_690286_+	(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase	R9W0U9	Flavobacterium_phage	7.7e-27	44.4
AUL88654.1\|690298_691156_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
AUL88655.1\|691167_692520_+\|protease	zinc metalloprotease RseP	NA	NA	NA	NA
AUL88656.1\|692549_694982_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
AUL88657.1\|695103_695589_+	chaperone protein Skp	NA	NA	NA	NA
AUL88658.1\|695592_696618_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
AUL88659.1\|696722_697178_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
AUL88660.1\|697181_697970_+	acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AUL88661.1\|697969_699118_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
AUL88662.1\|699114_699711_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	3.9e-26	40.0
AUL88663.1\|699747_703230_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	1.1e-208	36.9
AUL88664.1\|703242_704202_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
AUL88665.1\|704300_706442_+	lysine decarboxylase	NA	NA	NA	NA
AUL88666.1\|706498_706888_+	VOC family protein	NA	NA	NA	NA
AUL88667.1\|706952_708251_+\|tRNA	tRNA(Ile)-lysidine synthetase	NA	NA	NA	NA
AUL92936.1\|708299_708554_-	protein rof	NA	NA	NA	NA
AUL88668.1\|708546_708747_-	hypothetical protein	NA	NA	NA	NA
AUL88669.1\|709174_709597_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
AUL88670.1\|709610_710321_+	copper homeostasis/adhesion lipoprotein NlpE	NA	NA	NA	NA
AUL88671.1\|711351_713070_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
AUL88672.1\|713180_713888_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
AUL88673.1\|713884_714289_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
AUL88674.1\|714406_715222_-	methionine ABC transporter substrate-binding protein MetQ	NA	NA	NA	NA
AUL88675.1\|715261_715915_-	methionine ABC transporter	NA	NA	NA	NA
AUL88676.1\|715907_716939_-	D-methionine ABC transporter, ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-35	40.2
AUL88677.1\|717126_717702_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AUL88678.1\|723578_724272_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL88679.1\|724530_725331_+	EEP domain-containing protein	NA	NA	NA	NA
AUL88680.1\|725334_725958_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AUL88681.1\|726006_727365_-	murein transglycosylase D	A0A2H4J9N7	uncultured_Caudovirales_phage	1.3e-08	36.0
AUL88682.1\|727436_728192_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AUL88683.1\|728225_728948_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AUL88684.1\|728944_729412_-	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
AUL92937.1\|729476_730208_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	3.4e-40	39.0
AUL88685.1\|730746_731532_+	hypothetical protein	NA	NA	NA	NA
AUL88686.1\|731668_732148_-	hypothetical protein	NA	NA	NA	NA
AUL88687.1\|732157_733072_-	hypothetical protein	NA	NA	NA	NA
AUL88688.1\|733115_733598_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AUL88689.1\|734984_738449_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AUL88690.1\|738527_740006_-	type VI secretion system protein TssA	NA	NA	NA	NA
AUL88691.1\|739944_740688_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
AUL88692.1\|745023_746874_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AUL88693.1\|746877_747291_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AUL88694.1\|747297_748773_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AUL88695.1\|748823_749048_-	hypothetical protein	NA	NA	NA	NA
AUL88696.1\|749082_749583_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AUL88697.1\|752729_753424_-\|transposase	IS1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

1231764 : 1243480

Enterobacteria_phage(43.75%)

integrase,holin,tail,transposase

attL 1231677:1231691|attR 1245230:1245244

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1231677:1231691	attL	NA	NA	NA	NA
AUL89123.1\|1231764_1232835_-\|integrase	integrase	Q9MCR4	Enterobacteria_phage	5.1e-202	100.0
AUL89124.1\|1233119_1233431_-	hypothetical protein	A0A1I9LJL8	Stx_converting_phage	2.1e-55	100.0
AUL89125.1\|1233655_1234354_-	DUF1311 domain-containing protein	J9Q6K3	Salmonella_phage	1.5e-101	81.9
AUL89126.1\|1234484_1235093_-	eae-like domain protein	Q9MCR3	Enterobacteria_phage	5.0e-21	96.4
AUL89127.1\|1235236_1235605_+	hypothetical protein	Q716C1	Shigella_phage	2.5e-39	97.7
AUL89128.1\|1236059_1237273_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	8.4e-169	99.0
AUL89129.1\|1237278_1237536_-	conjugal transfer protein TraR	A0A1I9LJM6	Stx_converting_phage	2.0e-32	97.1
AUL89130.1\|1237634_1237916_-	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
AUL89131.1\|1237926_1238484_-	phage N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	2.0e-61	62.3
AUL89132.1\|1238476_1238638_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	7.7e-22	96.0
AUL89133.1\|1238634_1239315_-	exonuclease	B6DZ61	Enterobacteria_phage	5.6e-130	97.3
AUL89134.1\|1239311_1239494_-	recombinase	A0A1I9LJN0	Stx_converting_phage	7.2e-24	98.3
AUL89135.1\|1239646_1240312_+	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	7.2e-130	98.6
AUL89136.1\|1240308_1240932_+	antitermination protein	K7PM87	Enterobacteria_phage	2.2e-112	98.1
AUL89137.1\|1241211_1241928_+	hypothetical protein	NA	NA	NA	NA
AUL89138.1\|1242794_1243010_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.0e-33	100.0
AUL92954.1\|1243234_1243480_+\|tail	phage tail protein	Q687E6	Enterobacteria_phage	2.4e-30	98.5
1245230:1245244	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1545229 : 1585374

Escherichia_phage(30.43%)

lysis,transposase,integrase,tail,terminase,holin,protease

attL 1553717:1553732|attR 1571213:1571228

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL89398.1\|1545229_1546990_-\|protease	Lon protease family protein	NA	NA	NA	NA
AUL89399.1\|1547175_1547628_+	macrodomain Ter protein	NA	NA	NA	NA
AUL89400.1\|1547703_1548744_-	porin OmpA	NA	NA	NA	NA
AUL89401.1\|1548898_1549117_+	hypothetical protein	NA	NA	NA	NA
AUL89402.1\|1549100_1549610_-	cell division inhibitor SulA	NA	NA	NA	NA
AUL89403.1\|1549828_1550458_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
AUL92971.1\|1550420_1552574_-	TIGR01666 family membrane protein	NA	NA	NA	NA
AUL89404.1\|1552592_1553039_-	YccF domain-containing protein	NA	NA	NA	NA
AUL89405.1\|1553161_1555216_+	DNA helicase IV	A7KV33	Bacillus_phage	5.9e-21	27.9
1553717:1553732	attL	NA	NA	NA	NA
AUL89406.1\|1555247_1555706_-	methylglyoxal synthase	NA	NA	NA	NA
AUL89407.1\|1555801_1556464_-	hypothetical protein	NA	NA	NA	NA
AUL89408.1\|1556636_1557050_+	CoA-binding protein	NA	NA	NA	NA
AUL89409.1\|1557094_1557412_-	heat-shock protein HspQ	NA	NA	NA	NA
AUL89410.1\|1557469_1558660_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
AUL89411.1\|1558754_1559033_+	acylphosphatase	NA	NA	NA	NA
AUL89412.1\|1559029_1559359_-	sulfurtransferase TusE	NA	NA	NA	NA
AUL89413.1\|1559449_1560109_-	transmembrane protein	A0A2H4JFM9	uncultured_Caudovirales_phage	6.2e-41	48.5
AUL89414.1\|1560516_1561536_-\|integrase	integrase	A0A192Y7M7	Salmonella_phage	1.3e-85	49.7
AUL89415.1\|1561513_1561756_-	DUF4224 domain-containing protein	NA	NA	NA	NA
AUL89416.1\|1561823_1564259_-	exonuclease	A0A192Y6E0	Salmonella_phage	6.4e-59	58.2
AUL89417.1\|1564352_1564544_-	DUF1482 domain-containing protein	NA	NA	NA	NA
AUL89418.1\|1564540_1564729_-	cell division inhibition protein DicB	NA	NA	NA	NA
AUL92972.1\|1564995_1565301_+	hypothetical protein	NA	NA	NA	NA
AUL89419.1\|1565302_1565488_+	hypothetical protein	NA	NA	NA	NA
AUL89420.1\|1565674_1566064_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	1.5e-05	30.0
AUL89421.1\|1566075_1566204_-	hypothetical protein	NA	NA	NA	NA
AUL89422.1\|1566205_1566361_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	3.0e-07	53.2
AUL89423.1\|1566637_1566925_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AUL89424.1\|1566924_1567116_-	antitoxin	NA	NA	NA	NA
AUL89425.1\|1567143_1567545_-	XRE family transcriptional regulator	A0A1B5FPF4	Escherichia_phage	7.4e-13	54.5
AUL89426.1\|1567653_1567926_+	hypothetical protein	A0A0U2S629	Escherichia_phage	1.1e-12	45.8
AUL89427.1\|1568551_1568749_-	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	2.6e-27	96.9
AUL89428.1\|1569035_1569854_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AUL89429.1\|1570005_1570377_-	antitermination protein	Q777W5	Enterobacteria_phage	1.0e-53	84.0
AUL89430.1\|1570366_1570738_-	hypothetical protein	V5URS4	Shigella_phage	1.3e-35	63.7
AUL89431.1\|1570750_1571800_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.4e-110	54.9
1571213:1571228	attR	NA	NA	NA	NA
AUL89432.1\|1571801_1572080_-	hypothetical protein	I6PCV7	Cronobacter_phage	5.7e-12	48.4
AUL89433.1\|1572247_1572460_-	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	1.5e-25	95.4
AUL89434.1\|1573007_1573781_+	iroE	NA	NA	NA	NA
AUL92973.1\|1575055_1576281_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.1e-176	98.7
AUL89435.1\|1577939_1578155_+\|holin	holin	Q6H9V8	Enterobacteria_phage	1.7e-32	97.2
AUL89436.1\|1578117_1578462_-	hypothetical protein	NA	NA	NA	NA
AUL89437.1\|1578410_1578647_-	hypothetical protein	NA	NA	NA	NA
AUL89438.1\|1578615_1578798_+	hypothetical protein	NA	NA	NA	NA
AUL89439.1\|1578842_1579376_+	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.1e-99	94.4
AUL89440.1\|1579596_1579710_+	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
AUL89441.1\|1579711_1580179_+\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	2.2e-72	93.5
AUL89442.1\|1580261_1580402_+	hypothetical protein	NA	NA	NA	NA
AUL89443.1\|1580644_1580959_+	PerC family transcriptional regulator	NA	NA	NA	NA
AUL89444.1\|1581040_1581265_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.7e-20	92.5
AUL89445.1\|1581667_1582177_+\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
AUL92974.1\|1582999_1584682_+\|tail	phage tail protein	Q6H9T2	Enterobacteria_phage	7.0e-307	98.8
AUL92975.1\|1584750_1585374_+	hypothetical protein	A0A1U8QHD6	Enterobacteria_phage	1.3e-69	61.4

DBSCAN-SWA_8

1731072 : 1864126

157

Stx2-converting_phage(25.83%)

lysis,transposase,head,integrase,tail,terminase,tRNA,capsid,holin

attL 1794753:1794768|attR 1859882:1859897

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL89585.1\|1731072_1731417_+	DUF2335 domain-containing protein	A0A1B0YZW3	Pseudomonas_phage	4.3e-09	35.5
AUL89586.1\|1731493_1732612_-\|integrase	integrase	Q77Z04	Phage_21	2.9e-83	44.2
AUL89587.1\|1732580_1732850_-	excisionase	NA	NA	NA	NA
AUL89588.1\|1732911_1735383_-	exonuclease	K7PLW7	Enterobacteria_phage	8.5e-59	60.3
AUL89589.1\|1735476_1735668_-	DUF1482 domain-containing protein	NA	NA	NA	NA
AUL89590.1\|1735664_1735853_-	cell division inhibition protein DicB	NA	NA	NA	NA
AUL89591.1\|1736342_1736495_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	8.7e-07	51.1
AUL89592.1\|1736813_1737290_-	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	5.7e-12	53.4
AUL89593.1\|1737414_1737738_+	transcriptional regulator	A0A0R6PH31	Moraxella_phage	6.2e-10	44.9
AUL89594.1\|1737721_1738147_+	Rha family transcriptional regulator	NA	NA	NA	NA
AUL89595.1\|1738218_1739289_+	phage replisome organizer	A0A088CD36	Shigella_phage	4.5e-65	66.2
AUL89596.1\|1739295_1740042_+	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	1.4e-113	83.8
AUL89597.1\|1740063_1740780_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.6e-71	63.0
AUL92984.1\|1740812_1741094_+	DNA-binding protein	A0A222YXX1	Escherichia_phage	3.6e-30	73.6
AUL89598.1\|1741090_1741318_+	hypothetical protein	A0A1B5FPG2	Escherichia_phage	5.1e-11	49.3
AUL89599.1\|1741310_1741622_+	hypothetical protein	A0A0U2QV73	Escherichia_phage	7.2e-56	92.2
AUL89600.1\|1741749_1741968_+	sugar acetyltransferase inhibitor	A0A2R2Z311	Escherichia_phage	3.1e-21	70.8
AUL89601.1\|1741969_1742527_+	DUF551 domain-containing protein	A0A0N7KZV3	Escherichia_phage	2.8e-34	41.7
AUL89602.1\|1742759_1742972_+	hypothetical protein	A0A0P0ZAX5	Stx2-converting_phage	8.6e-29	98.6
AUL89603.1\|1743089_1743431_+	TIGR00156 family protein	A0A1I9LJU6	Stx_converting_phage	7.1e-49	92.1
AUL89604.1\|1743552_1743825_+	hypothetical protein	S4TNP0	Salmonella_phage	1.1e-12	53.0
AUL89605.1\|1744888_1745263_+	hypothetical protein	V5URS4	Shigella_phage	1.3e-32	62.7
AUL89606.1\|1745259_1746081_+	antitermination protein	K7P7B9	Enterobacteria_phage	4.1e-82	61.2
AUL89607.1\|1746646_1747078_+	tellurite resistance protein	H6WZJ6	Escherichia_phage	3.6e-66	96.5
AUL89608.1\|1746968_1747235_+	hypothetical protein	NA	NA	NA	NA
AUL89609.1\|1747645_1749496_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	98.7
AUL89610.1\|1749930_1750146_+\|holin	holin	Q6H9V8	Enterobacteria_phage	1.7e-32	97.2
AUL92985.1\|1750150_1750495_+	DUF1327 domain-containing protein	A0A0P0ZD64	Stx2-converting_phage	1.0e-58	100.0
AUL89611.1\|1750545_1751079_+	lysozyme	A0A0N7KZF9	Stx2-converting_phage	4.3e-101	99.4
AUL89612.1\|1751349_1751901_+	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	2.3e-97	96.3
AUL89613.1\|1752054_1752522_+\|lysis	lysis protein	A0A0P0ZDL0	Stx2-converting_phage	9.0e-79	100.0
AUL89614.1\|1752889_1753117_-	DUF3950 domain-containing protein	A0A0P0ZE23	Stx2-converting_phage	1.7e-35	100.0
AUL89615.1\|1753158_1753524_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	3.1e-66	100.0
AUL89616.1\|1753520_1753700_+	hypothetical protein	H6WZK7	Escherichia_phage	8.6e-22	91.1
AUL89617.1\|1753815_1754379_+\|terminase	terminase small subunit	A0A0N7KZJ8	Stx2-converting_phage	8.1e-90	100.0
AUL89618.1\|1754375_1756037_+\|terminase	terminase large subunit	A0A0P0ZEI4	Stx2-converting_phage	0.0e+00	100.0
AUL89619.1\|1756100_1758038_+\|capsid	phage major capsid protein	B6ETE8	Enterobacteria_phage	0.0e+00	99.2
AUL92986.1\|1758082_1758304_+	hypothetical protein	H6WZL1	Escherichia_phage	3.4e-36	100.0
AUL89620.1\|1760824_1761151_+\|head,tail	phage gp6-like head-tail connector protein	B6ETF0	Enterobacteria_phage	7.0e-54	100.0
AUL89621.1\|1761160_1761511_+\|head,tail	head-tail adaptor protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
AUL89622.1\|1761507_1761954_+	hypothetical protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
AUL89623.1\|1761950_1762295_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	9.4e-57	99.1
AUL89624.1\|1762353_1763070_+\|tail	phage tail protein	A0A0P0ZD29	Stx2-converting_phage	2.9e-129	100.0
AUL89625.1\|1763075_1763450_+\|tail	phage tail protein	A0A0N7KZA2	Stx2-converting_phage	2.3e-64	99.2
AUL89626.1\|1763473_1763755_+\|tail	phage tail protein	A0A0P0ZDE6	Stx2-converting_phage	1.3e-45	100.0
AUL89627.1\|1767034_1767376_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	2.0e-59	96.5
AUL89628.1\|1767375_1768074_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	1.7e-129	97.0
AUL89629.1\|1768084_1768828_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	9.2e-150	99.6
AUL89630.1\|1768725_1769406_+\|tail	phage tail protein	Q9EYE5	Enterobacteria_phage	2.3e-107	90.2
AUL89631.1\|1769652_1773129_+\|tail	phage tail protein	Q687E8	Enterobacteria_phage	0.0e+00	96.4
AUL89632.1\|1773195_1773795_+	Ail/Lom family protein	A0A0P0ZBV0	Stx2-converting_phage	2.0e-110	99.0
AUL89633.1\|1773859_1775173_+\|tail	phage tail protein	A0A0P0ZD68	Stx2-converting_phage	2.0e-78	99.1
AUL89634.1\|1775174_1775444_+\|tail	phage tail protein	A0A2R2Z347	Escherichia_phage	2.4e-44	98.9
AUL89635.1\|1775659_1778008_+	type III secretion system effector HECT-type E3 ubiquitin transferase	NA	NA	NA	NA
AUL89636.1\|1778598_1780659_+	type III effector	A0A0N7KZG3	Stx2-converting_phage	2.8e-63	29.1
AUL89637.1\|1780655_1781350_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL89638.1\|1782930_1783518_+	hypothetical protein	NA	NA	NA	NA
AUL89639.1\|1783540_1783666_+	NleB	Q8HAB2	Salmonella_phage	8.7e-05	58.3
AUL89640.1\|1783745_1784021_-	secretion protein EspO	NA	NA	NA	NA
AUL89641.1\|1784081_1785443_-	type III secretion protein GogB	Q9MBM1	Phage_Gifsy-1	1.4e-50	29.2
AUL89642.1\|1785563_1785776_-	hypothetical protein	NA	NA	NA	NA
AUL89643.1\|1786124_1786328_+	hypothetical protein	NA	NA	NA	NA
AUL89644.1\|1786305_1786773_+	DUF2335 domain-containing protein	A0A1B0YZW3	Pseudomonas_phage	4.4e-09	35.0
AUL89645.1\|1786849_1787968_-\|integrase	integrase	Q77Z04	Phage_21	3.5e-84	44.7
AUL92987.1\|1787936_1788206_-	excisionase	NA	NA	NA	NA
AUL89646.1\|1788267_1790811_-	exonuclease	V5UQJ3	Shigella_phage	7.1e-234	69.8
AUL89647.1\|1790903_1791092_-	DUF1482 domain-containing protein	NA	NA	NA	NA
AUL89648.1\|1791088_1791277_-	cell division inhibitor	NA	NA	NA	NA
AUL89649.1\|1791666_1791819_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	6.0e-08	55.3
AUL89650.1\|1792092_1792740_-	helix-turn-helix domain-containing protein	A0A1P8DTH0	Proteus_phage	4.7e-09	25.9
AUL89651.1\|1792836_1793064_+	cell division protein	NA	NA	NA	NA
AUL89652.1\|1793060_1793486_+	Rha family transcriptional regulator	NA	NA	NA	NA
AUL92988.1\|1793508_1794477_+	DNA-binding protein	U5P0A0	Shigella_phage	9.0e-73	52.4
AUL89653.1\|1794483_1795230_+	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	8.1e-114	83.2
1794753:1794768	attL	NA	NA	NA	NA
AUL89654.1\|1795251_1795968_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.0e-73	63.4
AUL89655.1\|1795964_1796282_+	DNA-binding protein	A0A222YXX1	Escherichia_phage	3.0e-33	71.6
AUL89656.1\|1796278_1796584_+	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	1.5e-50	95.0
AUL89657.1\|1796731_1796914_+	hypothetical protein	A0A2R2Z308	Escherichia_phage	1.0e-25	95.0
AUL89658.1\|1797079_1797439_+	hypothetical protein	A0A076GCN9	Escherichia_phage	1.3e-37	78.6
AUL89659.1\|1797441_1797729_+	hypothetical protein	A0A1I9LJM1	Stx_converting_phage	2.5e-47	95.8
AUL89660.1\|1797732_1798077_+	hypothetical protein	A0A2R2Z2X8	Escherichia_phage	9.7e-54	92.1
AUL89661.1\|1798408_1798588_+	hypothetical protein	NA	NA	NA	NA
AUL89662.1\|1798606_1799092_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
AUL92990.1\|1799069_1799267_-	hypothetical protein	NA	NA	NA	NA
AUL92989.1\|1799207_1799486_+	hypothetical protein	I6PCV7	Cronobacter_phage	6.3e-11	48.4
AUL89663.1\|1799487_1800537_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.5e-110	54.9
AUL89664.1\|1800549_1800909_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.7e-37	65.8
AUL89665.1\|1800905_1801589_+	antiterminator	I6PDF8	Cronobacter_phage	1.2e-55	48.9
AUL89666.1\|1801807_1802005_+	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	4.0e-28	98.5
AUL89667.1\|1802155_1803214_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	1.2e-192	91.5
AUL89668.1\|1803593_1803818_+	hypothetical protein	NA	NA	NA	NA
AUL89669.1\|1803870_1804092_+	hypothetical protein	K7PJU3	Enterobacteria_phage	2.0e-20	65.2
AUL89670.1\|1804270_1804702_+	tellurite resistance protein	H6WZJ6	Escherichia_phage	3.6e-66	96.5
AUL89671.1\|1804592_1804859_+	hypothetical protein	NA	NA	NA	NA
AUL89672.1\|1805272_1807123_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	98.7
AUL89673.1\|1807404_1807620_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	1.7e-32	97.2
AUL89674.1\|1807582_1807927_-	hypothetical protein	NA	NA	NA	NA
AUL89675.1\|1807875_1808112_-	hypothetical protein	NA	NA	NA	NA
AUL89676.1\|1808080_1808275_+	hypothetical protein	NA	NA	NA	NA
AUL89677.1\|1808307_1808841_+	lysozyme	A0A1U9AJ98	Stx1_converting_phage	2.1e-100	95.5
AUL89678.1\|1808918_1809110_+	hypothetical protein	A0A0M4S639	Salmonella_phage	7.8e-05	63.9
AUL92991.1\|1809267_1809735_+\|lysis	lysis protein	A0A0H4IT10	Shigella_phage	7.2e-68	87.1
AUL89679.1\|1809758_1809983_+	hypothetical protein	NA	NA	NA	NA
AUL92992.1\|1809979_1810198_+	hypothetical protein	Q9T1L1	Enterobacteria_phage	6.4e-11	73.3
AUL89680.1\|1810339_1810480_+	hypothetical protein	NA	NA	NA	NA
AUL89681.1\|1810609_1810795_-	DUF3950 domain-containing protein	H6WZK6	Escherichia_phage	6.4e-20	88.5
AUL89682.1\|1810836_1811202_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	7.8e-62	95.0
AUL89683.1\|1811492_1812056_+\|terminase	terminase small subunit	A0A0P0ZD56	Stx2-converting_phage	1.1e-89	100.0
AUL92993.1\|1812061_1813777_+\|terminase	terminase	A0A0N7KZG0	Stx2-converting_phage	0.0e+00	99.3
AUL92994.1\|1815753_1815975_+	hypothetical protein	A0A0P0ZD92	Stx2-converting_phage	2.9e-35	98.6
AUL89684.1\|1818501_1818828_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDE0	Stx2-converting_phage	2.0e-53	99.1
AUL89685.1\|1818838_1819189_+\|head,tail	head-tail adaptor protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
AUL89686.1\|1819185_1819632_+	hypothetical protein	A0A0P0ZCD2	Stx2-converting_phage	5.2e-76	98.6
AUL89687.1\|1819628_1819973_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
AUL89688.1\|1820039_1820756_+\|tail	phage tail protein	B6DZA6	Enterobacteria_phage	2.8e-127	99.6
AUL89689.1\|1820770_1821145_+\|tail	phage tail protein	A0A0P0ZE84	Stx2-converting_phage	1.7e-64	99.2
AUL89690.1\|1821168_1821450_+	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	2.3e-45	98.9
AUL89691.1\|1822967_1823384_+	hypothetical protein	A0A0P0ZDY0	Stx2-converting_phage	3.2e-43	86.5
AUL89692.1\|1824716_1825055_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	4.0e-52	89.5
AUL89693.1\|1825054_1825753_+\|tail	phage minor tail protein L	B6DZB1	Enterobacteria_phage	1.7e-129	96.6
AUL89694.1\|1825763_1826507_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	7.3e-147	98.4
AUL89695.1\|1826404_1827085_+\|tail	phage tail protein	Q9EYE5	Enterobacteria_phage	1.0e-107	90.6
AUL92995.1\|1830866_1831490_+	hypothetical protein	A0A1U8QHD6	Enterobacteria_phage	8.7e-69	60.9
AUL89696.1\|1831554_1832868_+\|tail	phage tail protein	A0A0P0ZD68	Stx2-converting_phage	7.4e-78	98.9
AUL89697.1\|1832869_1833139_+\|tail	phage tail protein	Q687E5	Enterobacteria_phage	6.4e-45	100.0
AUL89698.1\|1833250_1833832_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	2.7e-48	54.8
AUL89699.1\|1833899_1834535_+	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	3.7e-75	92.0
AUL89700.1\|1834662_1835721_-	type III effector	NA	NA	NA	NA
AUL89701.1\|1835795_1836446_-	DUF1076 domain-containing protein	B6DZZ5	Stx2-converting_phage	2.8e-25	37.2
AUL89702.1\|1837492_1838356_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	2.0e-10	28.2
AUL89703.1\|1838339_1839476_-	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	9.4e-29	39.8
AUL89704.1\|1839454_1839670_-	hypothetical protein	NA	NA	NA	NA
AUL89705.1\|1839725_1840952_+	peptidase T	NA	NA	NA	NA
AUL89706.1\|1841000_1842122_-	50S ribosomal protein L16 arginine hydroxylase	NA	NA	NA	NA
AUL89707.1\|1842197_1843658_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
AUL89708.1\|1843657_1844329_-	two-component system response regulator PhoP	NA	NA	NA	NA
AUL89709.1\|1844497_1845868_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.2e-108	44.9
AUL92996.1\|1845871_1846513_-	lysogenization protein HflD	NA	NA	NA	NA
AUL89710.1\|1846548_1847655_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
AUL89711.1\|1847708_1848170_-	NUDIX hydrolase	NA	NA	NA	NA
AUL89712.1\|1848179_1848833_-	23S rRNA pseudouridine synthase E	NA	NA	NA	NA
AUL89713.1\|1849004_1850255_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.9e-22	98.1
AUL89714.1\|1850368_1851511_-\|integrase	integrase	Q77Z02	Phage_21	1.2e-204	99.4
AUL89715.1\|1851500_1851737_-	excisionase	NA	NA	NA	NA
AUL92997.1\|1852010_1852556_+	antiterminator	I6PDF8	Cronobacter_phage	3.4e-45	49.7
AUL89716.1\|1852865_1853183_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	3.3e-40	86.1
AUL89717.1\|1853169_1853646_+	lysozyme	K7PKV2	Enterobacteria_phage	1.0e-85	96.8
AUL89718.1\|1853642_1854104_+\|lysis	lysis protein	A0A0K2FJD0	Enterobacteria_phage	1.9e-76	100.0
AUL89719.1\|1854135_1854429_-	lipoprotein bor	K7PL54	Enterobacteria_phage	1.5e-47	99.0
AUL89720.1\|1854720_1855131_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	2.7e-71	98.5
AUL89721.1\|1855416_1855623_+	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	5.8e-30	100.0
AUL89722.1\|1855787_1855982_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	3.7e-26	96.9
AUL89723.1\|1856370_1856916_+\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	3.1e-94	98.3
AUL89724.1\|1856890_1858816_+\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.4
AUL89725.1\|1858812_1859019_+\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
AUL89726.1\|1860468_1860990_+\|tail	phage tail tape measure protein	A0A291AWV3	Escherichia_phage	2.2e-41	100.0
1859882:1859897	attR	NA	NA	NA	NA
AUL89727.1\|1861054_1864126_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	1.9e-68	82.1

DBSCAN-SWA_9

2066474 : 2222582

151

Escherichia_phage(35.16%)

portal,lysis,transposase,head,integrase,tail,terminase,tRNA,capsid,holin

attL 2071812:2071837|attR 2117161:2117186

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL93012.1\|2066474_2067707_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	4.0e-17	39.5
AUL89913.1\|2067961_2068945_+	zinc transporter ZntB	NA	NA	NA	NA
AUL89914.1\|2069220_2069394_+	hypothetical protein	NA	NA	NA	NA
AUL89915.1\|2069423_2070797_+	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.5e-52	32.9
AUL89916.1\|2070925_2071861_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	1.2e-146	99.2
2071812:2071837	attL	NA	NA	NA	NA
AUL89917.1\|2071912_2073148_-\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	4.3e-237	98.0
AUL89918.1\|2073149_2073365_-	hypothetical protein	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
AUL89919.1\|2073464_2073653_-	hypothetical protein	A0A0U2QL97	Escherichia_phage	1.6e-18	97.9
AUL93013.1\|2073645_2073840_-	restriction alleviation and modification enhancement protein	A0A0U2QQP4	Escherichia_phage	7.6e-32	96.9
AUL89920.1\|2073896_2074706_-	recombination and repair protein RecT	A0A1P8DTF2	Proteus_phage	8.8e-106	71.5
AUL89921.1\|2074698_2077368_-	exonuclease VIII	A0A0U2I1R6	Escherichia_phage	4.2e-205	61.3
AUL93014.1\|2077448_2077619_-	hypothetical protein	A0A0U2SHB5	Escherichia_phage	3.3e-23	89.3
AUL89922.1\|2077618_2077840_-	cell division protein FtsZ	A0A0U2RTC4	Escherichia_phage	6.9e-37	97.3
AUL89923.1\|2077886_2078735_-	transcriptional regulator	A0A0P0ZE80	Stx2-converting_phage	5.9e-60	60.8
AUL89924.1\|2078940_2079141_+	hypothetical protein	NA	NA	NA	NA
AUL89925.1\|2079146_2079299_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	1.0e-07	55.3
AUL89926.1\|2079605_2080025_-	transcriptional regulator	K7PH71	Enterobacterial_phage	3.1e-14	60.6
AUL89927.1\|2080121_2080364_+	XRE family transcriptional regulator	K7PKH4	Enterobacteria_phage	2.3e-17	62.1
AUL89928.1\|2080360_2080783_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	5.9e-69	93.6
AUL89929.1\|2080860_2081649_+	hypothetical protein	G9L6A8	Escherichia_phage	5.1e-42	65.0
AUL89930.1\|2081655_2082402_+	DNA replication protein DnaC	V5UQI5	Shigella_phage	4.8e-114	80.9
AUL89931.1\|2082373_2083186_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	8.5e-117	87.7
AUL89932.1\|2083201_2083624_+	DUF977 domain-containing protein	A0A0U2QQN3	Escherichia_phage	2.8e-63	90.6
AUL89933.1\|2083620_2083851_+	hypothetical protein	A0A2R2Z315	Escherichia_phage	4.1e-16	76.8
AUL89934.1\|2084005_2084656_+	hypothetical protein	NA	NA	NA	NA
AUL89935.1\|2084642_2085764_+	DNA-binding protein	NA	NA	NA	NA
AUL89936.1\|2085886_2086099_+	type I toxin-antitoxin system hok family toxin	A0A0U2QV81	Escherichia_phage	1.2e-17	70.0
AUL89937.1\|2086073_2086262_-	hypothetical protein	NA	NA	NA	NA
AUL89938.1\|2086335_2086587_+	hypothetical protein	NA	NA	NA	NA
AUL89939.1\|2086658_2087258_+	DUF1367 domain-containing protein	A0A0U2RT94	Escherichia_phage	1.0e-106	92.5
AUL89940.1\|2087257_2087548_+	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	8.2e-46	87.5
AUL89941.1\|2087544_2088087_+	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	3.9e-73	72.3
AUL89942.1\|2088788_2090735_+	sialate O-acetylesterase	A0A075M342	Escherichia_Stx1-converting_recombinant_phage	0.0e+00	98.6
AUL89943.1\|2090871_2091051_+	DUF1378 domain-containing protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
AUL89944.1\|2091091_2091337_+	DUF826 domain-containing protein	A0A0P0ZGR2	Escherichia_phage	8.8e-17	100.0
AUL89945.1\|2091414_2091630_+\|holin	holin	A0A0P0ZFW5	Escherichia_phage	9.0e-34	100.0
AUL89946.1\|2091634_2092168_+	lysozyme	A0A1I9LJR4	Stx_converting_phage	1.8e-102	100.0
AUL89947.1\|2092438_2093008_+	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
AUL89948.1\|2093161_2093629_+\|lysis	lysis protein	Q9EYC9	Enterobacteria_phage	1.2e-78	100.0
AUL89949.1\|2093778_2094027_-	hypothetical protein	NA	NA	NA	NA
AUL89950.1\|2094083_2094560_+	DUF1441 domain-containing protein	Q9EYD0	Enterobacteria_phage	2.1e-83	100.0
AUL89951.1\|2094556_2096680_+\|terminase	terminase	Q9EYD1	Enterobacteria_phage	0.0e+00	100.0
AUL89952.1\|2096652_2096889_+	hypothetical protein	S5MBY8	Escherichia_phage	4.5e-34	100.0
AUL89953.1\|2096888_2098391_+\|portal	phage portal protein	Q9EYD2	Enterobacteria_phage	4.8e-291	100.0
AUL93015.1\|2098404_2100360_+	peptidase S14	S5M7Q8	Escherichia_phage	0.0e+00	99.7
AUL89954.1\|2100447_2100774_+	DUF2190 domain-containing protein	Q9EYD5	Enterobacteria_phage	6.1e-50	100.0
AUL89955.1\|2100766_2101048_+	DNA breaking-rejoining protein	Q8VNN4	Enterobacteria_phage	1.3e-45	98.9
AUL89956.1\|2101050_2101674_+\|tail	phage tail protein	Q8VNN3	Enterobacteria_phage	2.9e-104	98.6
AUL89957.1\|2101686_2102085_+\|tail	phage tail protein	Q9EYD7	Enterobacteria_phage	5.9e-71	100.0
AUL89958.1\|2102092_2102845_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	5.8e-136	100.0
AUL89959.1\|2102858_2103281_+\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	3.3e-72	98.6
AUL89960.1\|2103307_2103616_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	3.0e-54	99.0
AUL89961.1\|2103659_2106305_+\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	95.7
AUL89962.1\|2106301_2106631_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
AUL89963.1\|2106630_2107329_+\|tail	phage minor tail protein L	Q6H9T5	Enterobacteria_phage	5.8e-130	97.4
AUL89964.1\|2107334_2108078_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	2.8e-146	97.2
AUL89965.1\|2107975_2108653_+\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	2.6e-111	92.9
AUL89966.1\|2108893_2112367_+\|tail	phage tail protein	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	89.9
AUL89967.1\|2112434_2113034_+	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	2.6e-110	100.0
AUL89968.1\|2113098_2114421_+\|tail	phage tail protein	Q687E6	Enterobacteria_phage	2.0e-75	98.6
AUL89969.1\|2114422_2114692_+\|tail	phage tail protein	Q6H9S8	Enterobacteria_phage	2.4e-44	97.8
AUL89970.1\|2114804_2115380_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	5.3e-89	88.4
AUL89971.1\|2115452_2116082_+	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	1.3e-77	92.2
AUL89972.1\|2116163_2116805_+	DUF1076 domain-containing protein	B6DZC0	Enterobacteria_phage	6.8e-109	100.0
AUL89973.1\|2117385_2117820_-	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	4.0e-28	52.1
2117161:2117186	attR	NA	NA	NA	NA
AUL89974.1\|2119461_2122986_-	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
AUL89975.1\|2123259_2123526_+	DUF333 domain-containing protein	NA	NA	NA	NA
AUL89976.1\|2123522_2123945_-	heat-shock protein HslJ	NA	NA	NA	NA
AUL89977.1\|2124055_2125045_-	2-hydroxyacid dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	2.5e-70	44.0
AUL89978.1\|2125252_2127892_+	YdbH family protein	NA	NA	NA	NA
AUL89979.1\|2127888_2128074_+	YnbE family lipoprotein	NA	NA	NA	NA
AUL89980.1\|2128081_2128408_+	DUF1318 domain-containing protein	NA	NA	NA	NA
AUL89981.1\|2129719_2131219_+	NAD-dependent phenylacetaldehyde dehydrogenase	NA	NA	NA	NA
AUL89982.1\|2131277_2133551_-	primary-amine oxidase	NA	NA	NA	NA
AUL89983.1\|2133798_2135844_-	bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase	NA	NA	NA	NA
AUL89984.1\|2136128_2137058_+	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA
AUL89985.1\|2137069_2137357_+	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA
AUL89986.1\|2137365_2138112_+	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA
AUL89987.1\|2138126_2138624_+	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA
AUL89988.1\|2138631_2139702_+	phenylacetate-CoA oxygenase/reductase subunit PaaK	NA	NA	NA	NA
AUL89989.1\|2139698_2140466_+	2,3-dehydroadipyl-CoA hydratase	NA	NA	NA	NA
AUL89990.1\|2140465_2141254_+	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA
AUL89991.1\|2142670_2143093_+	phenylacetic acid degradation protein PaaD	NA	NA	NA	NA
AUL89992.1\|2143092_2144298_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
AUL89993.1\|2145740_2146691_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA
AUL89994.1\|2146672_2147263_+	phenylacetic acid degradation protein PaaY	NA	NA	NA	NA
AUL89995.1\|2147494_2148355_+	oxidoreductase	NA	NA	NA	NA
AUL89996.1\|2148418_2150725_+	DUF2773 domain-containing protein	NA	NA	NA	NA
AUL89997.1\|2150895_2151549_+	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
AUL89998.1\|2151548_2152445_+	hypothetical protein	NA	NA	NA	NA
AUL89999.1\|2152460_2154218_+	hypothetical protein	NA	NA	NA	NA
AUL93016.1\|2154231_2155524_+	hypothetical protein	NA	NA	NA	NA
AUL90000.1\|2155574_2156180_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
AUL90001.1\|2156380_2160283_+	ATP-dependent RNA helicase HrpA	A0A1V0SIV3	Klosneuvirus	2.2e-53	29.5
AUL90002.1\|2160554_2161355_+	YdcF family protein	NA	NA	NA	NA
AUL90003.1\|2161551_2162991_+	aldehyde dehydrogenase	NA	NA	NA	NA
AUL90004.1\|2163032_2164034_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AUL93017.1\|2164222_2164753_+	cytochrome b561	A0A0U2QLA7	Escherichia_phage	3.1e-19	44.9
AUL90005.1\|2164997_2165171_+	hypothetical protein	A0A0R6PKG1	Moraxella_phage	4.4e-07	67.4
AUL90006.1\|2165242_2165392_-	protein HokB	NA	NA	NA	NA
AUL90007.1\|2165491_2166861_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	6.3e-112	99.5
AUL90008.1\|2166938_2167151_+	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	1.3e-16	72.9
AUL90009.1\|2168676_2168943_+	hypothetical protein	NA	NA	NA	NA
AUL90010.1\|2169087_2169216_+	hypothetical protein	NA	NA	NA	NA
AUL90011.1\|2171768_2172113_+	DUF1327 domain-containing protein	A0A0P0ZD64	Stx2-converting_phage	1.0e-58	100.0
AUL90012.1\|2172163_2172697_+	lysozyme	A0A0N7KZF9	Stx2-converting_phage	2.8e-100	98.3
AUL90013.1\|2172774_2172993_+	hypothetical protein	Q687G2	Enterobacteria_phage	1.0e-16	93.3
AUL90014.1\|2172994_2173489_+\|lysis	lysis protein	Q9ZXB6	Enterobacteria_phage	4.0e-77	93.8
AUL90015.1\|2173485_2173710_+	hypothetical protein	NA	NA	NA	NA
AUL90016.1\|2174078_2174306_-	DUF3950 domain-containing protein	A0A0P0ZCA1	Stx2-converting_phage	3.9e-35	100.0
AUL90017.1\|2174347_2174713_+	HNH endonuclease	A0A0P0ZCH0	Stx2-converting_phage	2.0e-65	100.0
AUL90018.1\|2175733_2177671_+\|capsid	phage major capsid protein	H6WZL0	Escherichia_phage	0.0e+00	99.8
AUL93018.1\|2177715_2177937_+	hypothetical protein	H6WZL1	Escherichia_phage	3.4e-36	100.0
AUL90019.1\|2180463_2180790_+\|head,tail	phage gp6-like head-tail connector protein	B6ETF0	Enterobacteria_phage	7.0e-54	100.0
AUL90020.1\|2180799_2181150_+\|head,tail	head-tail adaptor protein	H6WZL5	Escherichia_phage	2.0e-59	100.0
AUL90021.1\|2181146_2181593_+	hypothetical protein	A0A0P0ZCD2	Stx2-converting_phage	8.1e-77	100.0
AUL90022.1\|2181991_2182708_+\|tail	phage tail protein	A0A0P0ZD29	Stx2-converting_phage	4.0e-126	97.5
AUL90023.1\|2182713_2183088_+\|tail	phage tail protein	A0A0N7KZA2	Stx2-converting_phage	7.8e-65	100.0
AUL90024.1\|2183111_2183393_+	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	7.9e-46	100.0
AUL90025.1\|2186674_2187016_+\|tail	phage tail protein	A0A0P0ZCS8	Stx2-converting_phage	8.7e-63	100.0
AUL90026.1\|2187015_2187714_+\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	8.4e-129	96.6
AUL90027.1\|2187724_2188468_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	6.8e-145	97.2
AUL90028.1\|2188365_2189046_+\|tail	tail assembly protein	Q6H9T3	Enterobacteria_phage	2.3e-107	91.2
AUL90029.1\|2188999_2189203_+	hypothetical protein	NA	NA	NA	NA
AUL90030.1\|2189233_2189761_-	superoxide dismutase	Q9MC02	Salmonella_phage	1.8e-59	60.5
AUL90031.1\|2189894_2193287_+\|tail	phage tail protein	A0A0P0ZDT4	Stx2-converting_phage	0.0e+00	88.0
AUL90032.1\|2193353_2193953_+	Ail/Lom family protein	H6WZM8	Escherichia_phage	4.2e-105	94.0
AUL90033.1\|2194017_2195331_+\|tail	phage tail protein	H6WZM9	Escherichia_phage	4.8e-77	97.9
AUL90034.1\|2195332_2195602_+\|tail	phage tail protein	Q6H9S8	Enterobacteria_phage	1.1e-44	98.9
AUL90035.1\|2195742_2196618_+	secretion protein EspS	A0A0P0ZCT1	Stx2-converting_phage	2.1e-161	99.3
AUL93019.1\|2196842_2197214_-	DUF1076 domain-containing protein	A0A0P0ZBX1	Stx2-converting_phage	1.7e-67	99.2
AUL90036.1\|2199483_2199687_-	selenoprotein YdfZ	J9Q802	Salmonella_phage	1.6e-11	55.2
AUL90037.1\|2199864_2200551_-	transcriptional regulator	NA	NA	NA	NA
AUL90038.1\|2200639_2201386_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AUL90039.1\|2201397_2201616_-	hypothetical protein	NA	NA	NA	NA
AUL93020.1\|2201522_2203568_+	peptidyl-dipeptidase Dcp	NA	NA	NA	NA
AUL90040.1\|2203611_2204082_-	hypothetical protein	NA	NA	NA	NA
AUL90041.1\|2204147_2204841_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL90042.1\|2205381_2206047_+	colanic acid/biofilm transcriptional regulator	NA	NA	NA	NA
AUL90043.1\|2206082_2208185_-	TonB-dependent siderophore receptor	A0A1B0VCF0	Salmonella_phage	1.1e-134	65.6
AUL93021.1\|2208099_2208279_+	hypothetical protein	NA	NA	NA	NA
AUL90044.1\|2208218_2208344_-	tonB-dependent receptor yncD	NA	NA	NA	NA
AUL90045.1\|2208426_2209488_+	hypothetical protein	NA	NA	NA	NA
AUL90046.1\|2209602_2211102_-	L-asparagine permease	NA	NA	NA	NA
AUL90047.1\|2211368_2211986_+	glutathione S-transferase family protein	NA	NA	NA	NA
AUL90048.1\|2212061_2212274_+	hypothetical protein	NA	NA	NA	NA
AUL90049.1\|2212498_2213192_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL90050.1\|2213772_2215431_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	8.3e-26	25.2
AUL90051.1\|2219243_2219486_+	hypothetical protein	NA	NA	NA	NA
AUL90052.1\|2219480_2220677_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUL90053.1\|2221445_2222582_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

2313690 : 2347634

Escherichia_phage(16.67%)

lysis,transposase,terminase,holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL90127.1\|2313690_2314385_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL90128.1\|2315340_2315859_+	L-methionine sulfoximine/L-methionine sulfone acetyltransferase	NA	NA	NA	NA
AUL90129.1\|2315855_2316305_+	hypothetical protein	NA	NA	NA	NA
AUL90130.1\|2316305_2316539_-	DUF2526 domain-containing protein	NA	NA	NA	NA
AUL93023.1\|2316624_2316846_-	GhoT/OrtT family toxin	NA	NA	NA	NA
AUL93024.1\|2316780_2316996_+	hypothetical protein	NA	NA	NA	NA
AUL90131.1\|2316992_2317088_+	stress response membrane protein YncL	NA	NA	NA	NA
AUL90132.1\|2317489_2318299_-	antibiotic acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	7.7e-17	41.0
AUL90133.1\|2318508_2319933_-	aminobutyraldehyde dehydrogenase	NA	NA	NA	NA
AUL90134.1\|2320737_2321679_-	ABC transporter permease	NA	NA	NA	NA
AUL90135.1\|2321679_2322657_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.6e-27	37.4
AUL90136.1\|2322708_2323854_-	spermidine/putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL90137.1\|2324098_2325505_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AUL90138.1\|2325583_2326000_-	type II toxin-antitoxin system HicB family antitoxin	F1C593	Cronobacter_phage	4.8e-31	57.8
AUL90139.1\|2326045_2326222_-	type II toxin-antitoxin system HicA family toxin	A0A0M3LQ86	Mannheimia_phage	5.2e-11	56.1
AUL90140.1\|2326443_2326674_+	DUF2554 domain-containing protein	NA	NA	NA	NA
AUL90141.1\|2326765_2328727_-\|protease	collagenase-like protease	Q6DW11	Phage_TP	9.2e-24	28.9
AUL90142.1\|2328799_2329336_-	XRE family transcriptional regulator	NA	NA	NA	NA
AUL90143.1\|2329388_2330603_+	BenE family transporter YdcO	NA	NA	NA	NA
AUL90144.1\|2330642_2331851_-\|transposase	transposase	A0A077SL42	Escherichia_phage	3.2e-208	93.5
AUL90145.1\|2332382_2333051_-	hypothetical protein	NA	NA	NA	NA
AUL90146.1\|2333353_2333947_-	tellurite resistance methyltransferase TehB	NA	NA	NA	NA
AUL90147.1\|2333943_2334936_-	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA
AUL90148.1\|2335059_2336040_+	hypothetical protein	NA	NA	NA	NA
AUL90149.1\|2336034_2336571_-	50S ribosomal protein L7/L12-serine acetyltransferase	NA	NA	NA	NA
AUL90150.1\|2336633_2336858_-	hypothetical protein	NA	NA	NA	NA
AUL90151.1\|2336873_2337077_+	hypothetical protein	NA	NA	NA	NA
AUL90152.1\|2336997_2338653_-	glucan biosynthesis protein D	NA	NA	NA	NA
AUL90153.1\|2338877_2340221_-	DUF1338 domain-containing protein	NA	NA	NA	NA
AUL93025.1\|2340437_2341361_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUL90154.1\|2341398_2341578_-	chemotaxis protein	NA	NA	NA	NA
AUL90155.1\|2341590_2343039_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	8.4e-06	24.4
AUL90156.1\|2344211_2344682_-\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	1.3e-77	98.1
AUL90157.1\|2344970_2345336_-	HNH endonuclease	A0A0P0ZCH0	Stx2-converting_phage	2.0e-65	100.0
AUL90158.1\|2345377_2345602_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.7e-20	92.5
AUL90159.1\|2345683_2345998_-	PerC family transcriptional regulator	NA	NA	NA	NA
AUL90160.1\|2346239_2346380_-	hypothetical protein	NA	NA	NA	NA
AUL90161.1\|2346462_2346930_-\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	1.8e-58	80.1
AUL90162.1\|2347418_2347634_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	7.7e-33	98.6

DBSCAN-SWA_11

2352575 : 2397315

Enterobacteria_phage(38.3%)

lysis,tail,holin,capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL93026.1\|2352575_2352773_-	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	6.8e-28	96.9
AUL90164.1\|2352985_2353675_-	antiterminator	I6PDF8	Cronobacter_phage	2.7e-55	47.6
AUL90165.1\|2353671_2354031_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	6.8e-34	61.1
AUL90166.1\|2354043_2355093_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.9e-108	53.4
AUL90167.1\|2355094_2355373_-	hypothetical protein	I6PCV7	Cronobacter_phage	4.8e-11	46.9
AUL90168.1\|2355540_2355753_-	type I toxin-antitoxin system hok family toxin	A0A0U2QV81	Escherichia_phage	6.8e-26	92.9
AUL90169.1\|2355942_2356047_-	hypothetical protein	NA	NA	NA	NA
AUL90170.1\|2356870_2357119_+	DNA damage-inducible protein DinI	B6DZC1	Enterobacteria_phage	1.4e-38	100.0
AUL90171.1\|2357115_2357250_-\|capsid	capsid protein	NA	NA	NA	NA
AUL90172.1\|2357280_2357922_-	DUF1076 domain-containing protein	B6DZC0	Enterobacteria_phage	6.8e-109	100.0
AUL90173.1\|2358003_2358633_-	T3SS effector protein NleG8	B6DZB9	Enterobacteria_phage	4.6e-78	92.8
AUL90174.1\|2358705_2359281_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	1.8e-89	88.9
AUL90175.1\|2359393_2359663_-\|tail	phage tail protein	Q6H9S8	Enterobacteria_phage	1.9e-44	98.9
AUL90176.1\|2359664_2360978_-\|tail	phage tail protein	A0A0P0ZE15	Stx2-converting_phage	3.6e-80	97.9
AUL90177.1\|2361038_2361638_-	Ail/Lom family protein	A0A0P0ZCF6	Stx2-converting_phage	5.9e-107	97.0
AUL90178.1\|2361704_2365181_-\|tail	phage tail protein	Q687E8	Enterobacteria_phage	0.0e+00	96.3
AUL90179.1\|2365416_2366097_-\|tail	tail assembly protein	A0A0P0ZDX8	Stx2-converting_phage	9.7e-114	98.2
AUL90180.1\|2365994_2366738_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	1.5e-147	97.6
AUL90181.1\|2366748_2367447_-\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	1.5e-130	98.3
AUL90182.1\|2367446_2367776_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
AUL90183.1\|2370455_2370764_-\|tail	phage tail assembly protein T	Q687F4	Enterobacteria_phage	1.3e-54	100.0
AUL90184.1\|2370790_2371213_-\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	2.2e-71	97.9
AUL90185.1\|2371226_2371979_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	5.8e-136	100.0
AUL90186.1\|2371986_2372385_-\|tail	phage tail protein	Q9EYD7	Enterobacteria_phage	5.9e-71	100.0
AUL90187.1\|2372397_2373021_-\|tail	phage tail protein	Q9EYD6	Enterobacteria_phage	2.5e-100	99.5
AUL90188.1\|2373023_2373305_-	DNA breaking-rejoining protein	Q8VNN4	Enterobacteria_phage	3.9e-45	97.8
AUL90189.1\|2373297_2373624_-	DUF2190 domain-containing protein	Q9EYD5	Enterobacteria_phage	6.1e-50	100.0
AUL90190.1\|2377169_2377406_-	hypothetical protein	S5MBY8	Escherichia_phage	4.5e-34	100.0
AUL90191.1\|2377378_2379502_-\|terminase	terminase	S5MDQ1	Escherichia_phage	0.0e+00	99.0
AUL90192.1\|2379498_2379975_-	DUF1441 domain-containing protein	Q8VNN8	Enterobacteria_phage	3.3e-84	100.0
AUL90193.1\|2380387_2380855_-\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	7.7e-78	100.0
AUL90194.1\|2381153_2381687_-	lysozyme	G9L6J6	Escherichia_phage	2.1e-100	96.6
AUL90195.1\|2382198_2382990_-	hypothetical protein	Q08JA0	Stx2-converting_phage	5.7e-33	85.5
AUL90196.1\|2382993_2383209_-\|holin	holin	Q6H9V8	Enterobacteria_phage	2.0e-33	100.0
AUL90197.1\|2383285_2383558_-	DUF826 domain-containing protein	A0A1I9LJR2	Stx_converting_phage	1.2e-22	100.0
AUL90198.1\|2383598_2383778_-	DUF1378 domain-containing protein	G9L6J3	Escherichia_phage	1.3e-25	100.0
AUL90199.1\|2386447_2387506_-	site-specific DNA-methyltransferase	S5MDR0	Escherichia_phage	2.6e-206	98.6
AUL90200.1\|2387657_2387855_-	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	6.8e-28	96.9
AUL90201.1\|2388081_2388903_-	antitermination protein	K7P7B9	Enterobacteria_phage	2.8e-83	61.9
AUL90202.1\|2388899_2389274_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	4.2e-34	62.7
AUL90203.1\|2389286_2390336_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.4e-110	54.3
AUL90204.1\|2390337_2390607_-	hypothetical protein	I6PCV7	Cronobacter_phage	2.7e-11	52.5
AUL90205.1\|2390660_2390888_-	hypothetical protein	NA	NA	NA	NA
AUL90206.1\|2391111_2391483_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AUL90207.1\|2391475_2391793_+	transcriptional regulator	NA	NA	NA	NA
AUL90208.1\|2391895_2392108_-	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	2.5e-28	95.7
AUL90209.1\|2392152_2392326_+	hypothetical protein	Q7Y2Q9	Escherichia_phage	3.1e-08	80.6
AUL90210.1\|2392322_2392871_-	hypothetical protein	A0A2R2Z302	Escherichia_phage	1.4e-41	75.4
AUL90211.1\|2393218_2393404_-	hypothetical protein	NA	NA	NA	NA
AUL90212.1\|2393463_2394222_-	DUF1627 domain-containing protein	A0A088CE47	Shigella_phage	1.2e-80	68.4
AUL90213.1\|2394256_2394922_-	replication protein	A0A0U2JGJ0	Escherichia_phage	3.5e-84	97.4
AUL90214.1\|2395722_2396274_-	hypothetical protein	NA	NA	NA	NA
AUL90215.1\|2396257_2396485_-	transcriptional regulator	NA	NA	NA	NA
AUL90216.1\|2396562_2396970_+	transcriptional regulator	I6PD69	Cronobacter_phage	7.2e-24	45.4
AUL90217.1\|2397159_2397315_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	8.8e-07	51.1

DBSCAN-SWA_12

2709764 : 2814265

107

Enterobacteria_phage(69.39%)

portal,plate,transposase,integrase,tail,holin,tRNA,capsid,terminase

attL 2751986:2752045|attR 2789327:2789447

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL90522.1\|2709764_2711537_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
AUL90523.1\|2711846_2712413_+	hydrolase	NA	NA	NA	NA
AUL90524.1\|2712409_2713228_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.5e-72	99.2
AUL90525.1\|2713280_2713676_+	hypothetical protein	NA	NA	NA	NA
AUL90526.1\|2713716_2714460_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
AUL90527.1\|2714456_2715428_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
AUL90528.1\|2715592_2718022_-	molybdopterin guanine dinucleotide-containing S/N-oxide reductase	NA	NA	NA	NA
AUL90529.1\|2718046_2719147_-	cytochrome C	NA	NA	NA	NA
AUL90530.1\|2719534_2720281_-	copper homeostasis protein CutC	NA	NA	NA	NA
AUL90531.1\|2720294_2720861_-	VOC family protein	NA	NA	NA	NA
AUL90532.1\|2721076_2722810_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	3.4e-86	33.5
AUL90533.1\|2722986_2723475_+	DUF1311 domain-containing protein	NA	NA	NA	NA
AUL90534.1\|2723596_2723989_-	flagellar biosynthesis protein FlhE	NA	NA	NA	NA
AUL90535.1\|2723988_2726067_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
AUL90536.1\|2726059_2727208_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
AUL90537.1\|2728064_2728454_-	two-component system response regulator	A0A2K9L4R0	Tupanvirus	1.3e-06	32.0
AUL90538.1\|2728468_2729518_-	chemotaxis response regulator protein-glutamate methylesterase	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
AUL90539.1\|2729520_2730381_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
AUL90540.1\|2730399_2732001_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	4.4e-16	30.6
AUL90541.1\|2732046_2733708_-	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	1.6e-08	62.5
AUL90542.1\|2733850_2734354_-	chemotaxis protein CheW	NA	NA	NA	NA
AUL90543.1\|2736343_2737270_-	motility protein MotB	NA	NA	NA	NA
AUL90544.1\|2737266_2738154_-	flagellar motor stator protein MotA	NA	NA	NA	NA
AUL90545.1\|2738860_2739211_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
AUL90546.1\|2739990_2740419_+	universal stress protein UspC	NA	NA	NA	NA
AUL90547.1\|2740425_2741850_-	trehalose-6-phosphate synthase	NA	NA	NA	NA
AUL90548.1\|2741824_2742625_-	trehalose-phosphatase	NA	NA	NA	NA
AUL90549.1\|2742791_2743778_-	L-arabinose ABC transporter permease AraH	NA	NA	NA	NA
AUL90550.1\|2743792_2745307_-	L-arabinose ABC transporter ATP-binding protein AraG	A0A2H4PQG7	Staphylococcus_phage	4.3e-13	27.1
AUL90551.1\|2745387_2746365_-	arabinose ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL90552.1\|2747161_2747665_+	ferritin	NA	NA	NA	NA
AUL90553.1\|2747743_2747995_-	DUF2766 domain-containing protein	NA	NA	NA	NA
AUL90554.1\|2748106_2748253_+	hypothetical protein	NA	NA	NA	NA
AUL90555.1\|2748458_2748782_+	hypothetical protein	NA	NA	NA	NA
AUL90556.1\|2748952_2749450_+	non-heme ferritin	NA	NA	NA	NA
AUL90557.1\|2749486_2749726_-	DUF2492 domain-containing protein	NA	NA	NA	NA
AUL90558.1\|2749917_2751129_+	tyrosine transporter TyrP	NA	NA	NA	NA
AUL90559.1\|2751190_2751856_-	YecA family protein	NA	NA	NA	NA
2751986:2752045	attL	NA	NA	NA	NA
AUL90560.1\|2752212_2753214_-\|integrase	integrase	Q94N03	Haemophilus_virus	9.3e-105	58.2
AUL90561.1\|2753219_2753567_-	DUF2511 domain-containing protein	NA	NA	NA	NA
AUL90562.1\|2753596_2754247_-	hypothetical protein	NA	NA	NA	NA
AUL90563.1\|2754262_2754667_-	transcriptional regulator	Q6QID2	Burkholderia_phage	1.6e-23	53.8
AUL90564.1\|2754742_2754949_+	hypothetical protein	NA	NA	NA	NA
AUL90565.1\|2754965_2755169_+	DNA-binding protein	P79674	Haemophilus_phage	3.1e-07	45.2
AUL90566.1\|2755190_2755541_+	DUF4761 domain-containing protein	A0A0A7NV42	Enterobacteria_phage	1.2e-48	81.0
AUL90567.1\|2755551_2755830_+	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	6.9e-34	77.2
AUL90568.1\|2755841_2756084_+	DUF4754 domain-containing protein	A0A0A7NQ71	Enterobacteria_phage	3.4e-37	97.5
AUL90569.1\|2756280_2756484_+	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	9.5e-25	80.6
AUL90570.1\|2756480_2756699_+	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	8.6e-08	50.8
AUL90571.1\|2756807_2757197_+	inositol monophosphatase	NA	NA	NA	NA
AUL90572.1\|2757193_2760034_+	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	88.6
AUL90573.1\|2760110_2761070_+	recombinase	A0A0A7NPX4	Enterobacteria_phage	2.0e-181	99.7
AUL90574.1\|2761074_2761386_+	chromosome partitioning protein	A0A0A7NPT5	Enterobacteria_phage	1.2e-47	95.1
AUL90575.1\|2761449_2762040_+	hypothetical protein	Q8HAA6	Salmonella_phage	1.8e-31	50.7
AUL90576.1\|2762529_2763576_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.5e-206	100.0
AUL90577.1\|2763575_2765327_-	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	0.0e+00	98.1
AUL90578.1\|2765481_2766318_+\|capsid	phage capsid protein	A0A0A7NRY7	Enterobacteria_phage	2.7e-150	99.6
AUL90579.1\|2766341_2767394_+\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	4.9e-189	94.6
AUL90580.1\|2767439_2768240_+\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	1.5e-126	89.1
AUL90581.1\|2768341_2768836_+\|capsid	capsid assembly protein	A0A0A7NPU2	Enterobacteria_phage	1.9e-87	97.0
AUL90582.1\|2768835_2769036_+\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	7.9e-32	98.5
AUL90583.1\|2769038_2769362_+\|holin	holin	A0A0A7NRY9	Enterobacteria_phage	1.7e-47	93.5
AUL90584.1\|2769358_2769751_+	peptidase M15	A0A0A7NQ86	Enterobacteria_phage	2.9e-70	98.5
AUL90585.1\|2769747_2770155_+	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	4.2e-64	95.6
AUL90586.1\|2770293_2772171_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	H6WZJ9	Escherichia_phage	1.1e-305	82.2
AUL90587.1\|2772194_2772662_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	6.7e-82	94.8
AUL90588.1\|2772654_2773290_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	1.1e-114	100.0
AUL90589.1\|2773286_2773868_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.2e-101	97.4
AUL90590.1\|2773864_2774215_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	9.2e-60	100.0
AUL90591.1\|2774218_2775115_+\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	1.9e-154	97.7
AUL90592.1\|2775107_2775638_+\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	4.3e-93	98.8
AUL90593.1\|2775640_2777773_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	2.7e-130	66.4
AUL90594.1\|2777772_2778351_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.2e-95	88.5
AUL90595.1\|2779121_2779616_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.1e-85	99.4
AUL90596.1\|2779622_2782430_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	95.6
AUL90597.1\|2782416_2782653_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	3.9e-22	98.0
AUL90598.1\|2782580_2782946_-\|tail	phage tail protein	A0A0A7NPZ0	Enterobacteria_phage	1.1e-55	96.7
AUL90599.1\|2783000_2783513_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	3.2e-93	100.0
AUL90600.1\|2783512_2784697_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	5.6e-226	99.5
AUL90601.1\|2784854_2785964_+	late control protein	A0A0A7NQ97	Enterobacteria_phage	2.4e-194	94.0
AUL90602.1\|2786363_2787503_+	hypothetical protein	NA	NA	NA	NA
AUL90603.1\|2787792_2788053_+	hypothetical protein	NA	NA	NA	NA
AUL90604.1\|2788243_2788384_+	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	7.0e-19	100.0
AUL90605.1\|2788572_2788965_-	hypothetical protein	NA	NA	NA	NA
AUL90606.1\|2789845_2790394_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
2789327:2789447	attR	NA	NA	NA	NA
AUL90607.1\|2790450_2792283_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA
AUL90608.1\|2792279_2792936_-	DNA-binding response regulator	NA	NA	NA	NA
AUL90609.1\|2793394_2793619_+	DUF2594 domain-containing protein	NA	NA	NA	NA
AUL90610.1\|2794638_2795391_-	L-cystine ABC transporter ATP-binding protein YecC	G9BWD6	Planktothrix_phage	6.0e-32	41.4
AUL90611.1\|2795387_2796056_-	amino acid ABC transporter permease	NA	NA	NA	NA
AUL90612.1\|2796070_2797057_-	D-cysteine desulfhydrase	NA	NA	NA	NA
AUL90613.1\|2797161_2797962_-	cystine ABC transporter substrate-binding protein	NA	NA	NA	NA
AUL90614.1\|2798049_2798601_-	flagella biosynthesis regulatory protein FliZ	NA	NA	NA	NA
AUL90615.1\|2799528_2800860_-	flagellin FliC	NA	NA	NA	NA
AUL90616.1\|2801105_2802521_+	flagellar filament capping protein FliD	NA	NA	NA	NA
AUL90617.1\|2802536_2802947_+	flagella export chaperone FliS	NA	NA	NA	NA
AUL90618.1\|2802946_2803312_+	flagellar protein FliT	NA	NA	NA	NA
AUL90619.1\|2803389_2804877_+	alpha-amylase	NA	NA	NA	NA
AUL90620.1\|2804910_2805324_-	hypothetical protein	NA	NA	NA	NA
AUL90621.1\|2805510_2806716_+	YeeE/YedE family protein	NA	NA	NA	NA
AUL90622.1\|2806712_2806946_+	SirA-like protein	NA	NA	NA	NA
AUL90623.1\|2807052_2807721_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	9.6e-82	60.8
AUL90624.1\|2808113_2808428_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
AUL90625.1\|2808642_2810301_+	flagellar basal body M-ring protein FliF	NA	NA	NA	NA
AUL90626.1\|2810293_2811289_+	flagellar motor switch protein FliG	NA	NA	NA	NA
AUL90627.1\|2811281_2811968_+	flagellar assembly protein FliH	NA	NA	NA	NA
AUL90628.1\|2813068_2814265_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

2839224 : 2904107

Escherichia_phage(41.94%)

plate,lysis,transposase,head,tail,holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL90658.1\|2839224_2839919_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL90659.1\|2839980_2840511_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	1.6e-55	99.1
AUL90660.1\|2840533_2840776_+	hypothetical protein	NA	NA	NA	NA
AUL90661.1\|2841146_2841461_-	PerC family transcriptional regulator	NA	NA	NA	NA
AUL90662.1\|2841674_2841851_-	hypothetical protein	NA	NA	NA	NA
AUL90663.1\|2841920_2842388_-\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	2.1e-67	87.7
AUL90664.1\|2842544_2843114_-	hypothetical protein	A0A2R2Z339	Escherichia_phage	1.5e-104	99.5
AUL90665.1\|2843388_2843922_-	lysozyme	A0A1I9LJR4	Stx_converting_phage	1.3e-100	97.7
AUL90666.1\|2843926_2844142_-\|holin	holin	A0A2R2Z340	Escherichia_phage	1.2e-33	100.0
AUL90667.1\|2844219_2844465_-	DUF826 domain-containing protein	A0A0P0ZGR2	Escherichia_phage	8.8e-17	100.0
AUL90668.1\|2844505_2844685_-	DUF1378 domain-containing protein	A0A0P0ZCJ7	Stx2-converting_phage	3.7e-25	100.0
AUL90669.1\|2847075_2847342_-	hypothetical protein	NA	NA	NA	NA
AUL93043.1\|2847232_2847487_-	hypothetical protein	H6WZJ6	Escherichia_phage	1.0e-36	98.8
AUL90670.1\|2847763_2848348_-	hypothetical protein	A0A2D1GNR8	Pseudomonas_phage	4.2e-17	39.8
AUL90671.1\|2848515_2848764_+	transcriptional regulator	A0A2D1GNH1	Pseudomonas_phage	1.3e-28	73.2
AUL90672.1\|2848765_2850856_+\|transposase	transposase	A0A2D1GNK9	Pseudomonas_phage	4.0e-166	47.4
AUL90673.1\|2850927_2851860_+	transcriptional regulator	A0A0C4UQR3	Shigella_phage	1.2e-69	48.3
AUL90674.1\|2851862_2852084_+	hypothetical protein	NA	NA	NA	NA
AUL90675.1\|2852096_2852351_+	hypothetical protein	NA	NA	NA	NA
AUL90676.1\|2852352_2852634_+	host nuclease inhibitor protein	I6WB15	Burkholderia_virus	2.8e-11	47.4
AUL90677.1\|2852630_2852903_+	hypothetical protein	NA	NA	NA	NA
AUL90678.1\|2852907_2853201_+	hypothetical protein	NA	NA	NA	NA
AUL90679.1\|2853212_2853743_+	host-nuclease inhibitor protein Gam	C9DGL8	Escherichia_phage	1.9e-48	57.1
AUL90680.1\|2853840_2854383_+	hypothetical protein	A0A0C4UQZ6	Shigella_phage	4.9e-28	39.4
AUL90681.1\|2854386_2854920_+	hypothetical protein	A0A0C4UQU2	Shigella_phage	5.9e-66	66.7
AUL90682.1\|2854919_2855435_+	hypothetical protein	C9DGM0	Escherichia_phage	1.2e-47	55.4
AUL90683.1\|2855438_2855990_+	AsnC family protein	NA	NA	NA	NA
AUL90684.1\|2855986_2856298_+	hypothetical protein	NA	NA	NA	NA
AUL90685.1\|2856294_2856663_+	hypothetical protein	NA	NA	NA	NA
AUL93044.1\|2856678_2857011_+	hypothetical protein	NA	NA	NA	NA
AUL90686.1\|2857003_2857201_+	hypothetical protein	A0A291AXE7	Shigella_phage	1.2e-05	34.5
AUL90687.1\|2857190_2857487_+	hypothetical protein	NA	NA	NA	NA
AUL90688.1\|2857483_2857993_+	DUF1018 domain-containing protein	A0A0C4UQU3	Shigella_phage	1.1e-26	41.9
AUL90689.1\|2858062_2858488_+	transcriptional regulator	NA	NA	NA	NA
AUL90690.1\|2858559_2859060_+	endolysin	B6SD29	Bacteriophage	3.0e-27	42.6
AUL93045.1\|2859278_2859725_+	lysozyme	B6SD19	Bacteriophage	1.2e-11	48.0
AUL90691.1\|2859734_2859962_+	conjugal transfer protein TraR	NA	NA	NA	NA
AUL90692.1\|2859942_2860251_+	DUF2730 domain-containing protein	NA	NA	NA	NA
AUL90693.1\|2860247_2860538_+	hypothetical protein	A0A0C4UR00	Shigella_phage	4.7e-25	63.2
AUL90694.1\|2860540_2861122_+	DUF3486 domain-containing protein	A0A0C4UQU5	Shigella_phage	1.9e-49	57.0
AUL90695.1\|2861121_2862786_+	hypothetical protein	A0A0C4UR29	Shigella_phage	8.1e-231	73.2
AUL93046.1\|2862785_2864375_+	DUF935 domain-containing protein	A0A0C4UQR8	Shigella_phage	1.4e-168	57.7
AUL90696.1\|2864358_2865690_+\|head	phage head morphogenesis protein	A0A0C4UQY9	Shigella_phage	3.9e-151	58.8
AUL90697.1\|2865811_2866285_+	phage virion morphogenesis protein	A0A0C4UR01	Shigella_phage	1.7e-37	53.9
AUL90698.1\|2866461_2867586_+\|protease	protease	A0A0C4UQU6	Shigella_phage	2.9e-78	47.9
AUL90699.1\|2867585_2868533_+\|head	head protein	A0A0C4UQR9	Shigella_phage	1.2e-122	67.2
AUL90700.1\|2868576_2868987_+	hypothetical protein	NA	NA	NA	NA
AUL90701.1\|2868983_2869403_+	DUF1320 domain-containing protein	A0A0C4UR02	Shigella_phage	4.7e-34	53.6
AUL90702.1\|2869399_2869960_+	DUF1834 domain-containing protein	A0A0C4UQU7	Shigella_phage	1.1e-41	47.7
AUL90703.1\|2869960_2870206_+	DUF2635 domain-containing protein	C9DGP6	Escherichia_phage	2.8e-07	54.5
AUL90704.1\|2870202_2871705_+\|tail	phage tail protein	C9DGP7	Escherichia_phage	5.6e-138	51.3
AUL90705.1\|2871713_2872079_+\|tail	phage tail protein	C9DGP8	Escherichia_phage	2.0e-25	51.7
AUL90706.1\|2872093_2872570_+	hypothetical protein	A0A0C4UR03	Shigella_phage	1.0e-21	50.8
AUL90707.1\|2872511_2872694_+	hypothetical protein	C9DGQ0	Escherichia_phage	3.2e-08	54.8
AUL90708.1\|2872696_2874772_+\|tail	tail tape measure protein	A0A0C4UQU8	Shigella_phage	3.7e-71	37.7
AUL90709.1\|2874737_2876108_+	multidrug DMT transporter permease	C9DGQ2	Escherichia_phage	1.0e-53	33.1
AUL90710.1\|2876091_2877216_+\|tail	phage tail protein	C9DGQ3	Escherichia_phage	2.9e-91	48.5
AUL90711.1\|2877205_2877820_+\|plate	phage baseplate assembly protein V	A0A0C4UQZ3	Shigella_phage	4.7e-51	51.0
AUL90712.1\|2877812_2878250_+	hypothetical protein	A0A0C4UR04	Shigella_phage	1.9e-38	53.5
AUL90713.1\|2879319_2879880_+	DUF2313 domain-containing protein	C9DGQ7	Escherichia_phage	2.3e-44	48.1
AUL90714.1\|2879879_2880791_+\|tail	phage tail protein	C9DGQ8	Escherichia_phage	2.9e-36	47.5
AUL93047.1\|2880825_2881347_-\|tail	phage tail protein	A0A0U2QV64	Escherichia_phage	2.1e-47	52.6
AUL93048.1\|2881426_2881630_-\|tail	phage tail protein	NA	NA	NA	NA
AUL90715.1\|2881652_2881859_+	hypothetical protein	NA	NA	NA	NA
AUL90716.1\|2881852_2882413_+	DNA-invertase	A0A0C4UR34	Shigella_phage	4.3e-75	75.7
AUL90717.1\|2882512_2884552_+	sialate O-acetylesterase	S5MDQ7	Escherichia_phage	4.3e-274	79.4
AUL90718.1\|2884698_2884881_+	DUF1378 domain-containing protein	S5MBZ5	Escherichia_phage	1.3e-09	54.4
AUL90719.1\|2884916_2885162_+	DUF826 domain-containing protein	NA	NA	NA	NA
AUL93049.1\|2885200_2885512_-	hypothetical protein	NA	NA	NA	NA
AUL90720.1\|2885779_2885980_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
AUL90721.1\|2885933_2886671_+	protein mom	A0A0C4UQZ7	Shigella_phage	1.7e-103	79.0
AUL90722.1\|2887424_2888138_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUL90723.1\|2888272_2888470_-	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	7.5e-27	95.4
AUL90724.1\|2888694_2889249_-	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	6.8e-65	66.9
AUL90725.1\|2889257_2889617_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	5.0e-37	63.5
AUL90726.1\|2889629_2890679_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.4e-110	54.3
AUL90727.1\|2890680_2890953_-	hypothetical protein	NA	NA	NA	NA
AUL90728.1\|2891074_2891419_-	TIGR00156 family protein	A0A1I9LJU6	Stx_converting_phage	6.1e-56	99.1
AUL90729.1\|2891538_2891751_-	Hok/Gef family protein	A0A0P0ZAX5	Stx2-converting_phage	6.0e-30	100.0
AUL90730.1\|2891984_2892542_-	DUF551 domain-containing protein	A0A0N7KZV3	Escherichia_phage	2.8e-34	41.7
AUL90731.1\|2892888_2893200_-	hypothetical protein	A0A0U2QV73	Escherichia_phage	7.2e-56	92.2
AUL90732.1\|2893192_2893420_-	hypothetical protein	A0A1B5FPG2	Escherichia_phage	5.1e-11	49.3
AUL93050.1\|2893416_2893698_-	DNA-binding protein	A0A222YXX1	Escherichia_phage	1.0e-29	73.6
AUL90733.1\|2893730_2894447_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	2.1e-71	62.6
AUL90734.1\|2894468_2895215_-	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	1.8e-113	82.8
AUL90735.1\|2895221_2896292_-	phage replisome organizer	A0A088CD36	Shigella_phage	8.5e-64	65.7
AUL90736.1\|2896363_2896789_-	Rha family transcriptional regulator	NA	NA	NA	NA
AUL93051.1\|2897728_2898526_+	protein MtfA	NA	NA	NA	NA
AUL90737.1\|2902894_2904107_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	3.5e-167	98.0

DBSCAN-SWA_14

3005706 : 3039499

Enterobacteria_phage(35.29%)

transposase,lysis,tail,integrase,terminase

attL 3009385:3009400|attR 3029518:3029533

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL90817.1\|3005706_3005844_+\|tail	phage tail protein	A0A2R2Z347	Escherichia_phage	3.7e-17	95.6
AUL90818.1\|3005949_3006831_+	T3SS effector protein NleH	A5LH48	Enterobacteria_phage	3.9e-147	90.4
AUL93057.1\|3006805_3006991_-	hypothetical protein	NA	NA	NA	NA
AUL90819.1\|3007097_3007886_+	cell division protein	A5LH49	Enterobacteria_phage	1.6e-144	98.1
AUL90820.1\|3008009_3008381_-\|integrase	integrase	K7PH54	Enterobacteria_phage	1.1e-58	95.1
AUL90821.1\|3008403_3008670_-	hypothetical protein	Q9ZXG3	Shigella_phage	1.6e-43	95.5
3009385:3009400	attL	NA	NA	NA	NA
AUL90822.1\|3009829_3010327_-\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.0e-11	32.5
AUL90823.1\|3010721_3010946_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	4.1e-21	92.7
AUL90824.1\|3011027_3011342_-	PerC family transcriptional regulator	NA	NA	NA	NA
AUL90825.1\|3011582_3011723_-	hypothetical protein	NA	NA	NA	NA
AUL90826.1\|3011805_3012273_-\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	2.1e-67	87.7
AUL90827.1\|3012424_3012640_-	hypothetical protein	NA	NA	NA	NA
AUL90828.1\|3012762_3013296_-	lysozyme	B6DZ92	Enterobacteria_phage	2.4e-99	95.5
AUL90829.1\|3013421_3013685_+	hypothetical protein	NA	NA	NA	NA
AUL90830.1\|3014151_3014379_-	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	4.2e-21	90.4
AUL90831.1\|3014922_3015639_-	hypothetical protein	NA	NA	NA	NA
AUL90832.1\|3015849_3016539_-	antitermination protein	I6PDF8	Cronobacter_phage	1.5e-58	48.1
AUL90833.1\|3016553_3016676_-	hypothetical protein	NA	NA	NA	NA
AUL90834.1\|3017013_3017973_+	DUF2219 domain-containing protein	NA	NA	NA	NA
AUL90835.1\|3019034_3019379_+	hypothetical protein	K7PJY7	Enterobacterial_phage	1.5e-59	99.1
AUL90836.1\|3019485_3019704_+	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
AUL90837.1\|3019681_3020755_+\|integrase	integrase	K7PHK0	Enterobacteria_phage	9.7e-193	95.8
AUL90838.1\|3021098_3022346_+	multidrug resistance protein MdtA	NA	NA	NA	NA
AUL90839.1\|3022345_3025468_+	multidrug transporter subunit MdtB	NA	NA	NA	NA
AUL90840.1\|3025468_3028546_+	multidrug resistance protein MdtC	NA	NA	NA	NA
AUL90841.1\|3028546_3029962_+	multidrug transporter subunit MdtD	NA	NA	NA	NA
3029518:3029533	attR	NA	NA	NA	NA
AUL90842.1\|3029958_3031362_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	3.0e-32	29.0
AUL90843.1\|3031358_3032081_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	1.9e-30	33.2
AUL90844.1\|3032271_3032604_+	DUF1508 domain-containing protein	NA	NA	NA	NA
AUL90845.1\|3032812_3033109_+	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
AUL90846.1\|3033110_3033407_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AUL90847.1\|3033509_3034871_+	U32 family peptidase	Q6DW11	Phage_TP	1.6e-216	99.5
AUL90848.1\|3035004_3035214_-	hypothetical protein	NA	NA	NA	NA
AUL90849.1\|3035201_3035519_-	hypothetical protein	NA	NA	NA	NA
AUL90850.1\|3035932_3036832_+	lipid kinase YegS	NA	NA	NA	NA
AUL90851.1\|3036913_3037693_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
AUL90852.1\|3037792_3038800_-	galactitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
AUL90853.1\|3038804_3039499_-\|transposase	IS1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

3056352 : 3139144

Enterobacteria_phage(38.57%)

transposase,lysis,head,tail,integrase,holin,tRNA,capsid,terminase

attL 3073453:3073468|attR 3141400:3141415

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL90868.1\|3056352_3057046_+\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL90869.1\|3058457_3059132_-	fimbrial assembly protein	NA	NA	NA	NA
AUL90870.1\|3059212_3059755_-	hypothetical protein	NA	NA	NA	NA
AUL90871.1\|3060046_3060328_-	DUF2574 domain-containing protein	NA	NA	NA	NA
AUL90872.1\|3060590_3061700_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AUL90873.1\|3061831_3063865_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.8e-54	27.6
AUL90874.1\|3071501_3071819_+	hypothetical protein	NA	NA	NA	NA
AUL90875.1\|3072124_3073213_+	MoxR family ATPase	NA	NA	NA	NA
AUL90876.1\|3073223_3075503_+	hypothetical protein	NA	NA	NA	NA
3073453:3073468	attL	NA	NA	NA	NA
AUL90877.1\|3075495_3076632_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	4.2e-162	97.1
AUL90878.1\|3076628_3078026_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	2.9e-237	67.0
AUL90879.1\|3078150_3078612_+	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	2.4e-76	99.3
AUL90880.1\|3078651_3079122_-	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	2.6e-81	99.4
AUL90881.1\|3079168_3079888_-	DNA-binding response regulator	NA	NA	NA	NA
AUL90882.1\|3079884_3081570_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	8.1e-303	99.3
AUL90883.1\|3081767_3082462_-\|transposase	IS1 family transposase	NA	NA	NA	NA
AUL93058.1\|3082630_3083659_+	secretion protein EspV	Q6H9S1	Enterobacteria_phage	2.0e-195	99.4
AUL90884.1\|3084311_3085556_+	hypothetical protein	H6WZN2	Escherichia_phage	2.0e-229	91.1
AUL90885.1\|3085887_3086469_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	4.3e-54	60.0
AUL90886.1\|3086579_3086849_-\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	4.9e-45	98.9
AUL90887.1\|3088887_3092364_-\|tail	phage tail protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	97.3
AUL90888.1\|3092599_3093280_-\|tail	tail assembly protein	A0A0P0ZDX8	Stx2-converting_phage	4.1e-112	96.4
AUL90889.1\|3093177_3093921_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	7.5e-144	96.3
AUL90890.1\|3093931_3094630_-\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	3.1e-131	98.7
AUL90891.1\|3094629_3094971_-\|tail	phage tail protein	A0A0P0ZCS8	Stx2-converting_phage	8.7e-63	100.0
AUL90892.1\|3098253_3098535_-	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	2.3e-45	98.9
AUL90893.1\|3099724_3100069_-	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
AUL90894.1\|3100065_3100512_-	hypothetical protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
AUL90895.1\|3100508_3100859_-\|head,tail	head-tail adaptor protein	A0A0P0ZB28	Stx2-converting_phage	1.0e-58	99.1
AUL90896.1\|3100869_3101196_-\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDE0	Stx2-converting_phage	5.4e-54	100.0
AUL90897.1\|3103722_3103944_-	hypothetical protein	A0A0P0ZD92	Stx2-converting_phage	5.8e-36	100.0
AUL90898.1\|3103988_3105926_-\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	100.0
AUL90899.1\|3105989_3107651_-\|terminase	terminase	A0A0P0ZEI4	Stx2-converting_phage	0.0e+00	98.6
AUL90900.1\|3107647_3108211_-\|terminase	terminase small subunit	A0A0P0ZD56	Stx2-converting_phage	3.3e-83	92.5
AUL90901.1\|3108394_3108532_-	DNase	H6WZK7	Escherichia_phage	6.6e-06	75.0
AUL90902.1\|3108500_3108866_-	HNH endonuclease	B6ETE5	Enterobacteria_phage	4.0e-66	99.2
AUL90903.1\|3108907_3109135_+	DUF3950 domain-containing protein	A0A0P0ZE23	Stx2-converting_phage	1.7e-35	100.0
AUL90904.1\|3109386_3109521_+	hypothetical protein	NA	NA	NA	NA
AUL90905.1\|3109597_3109855_-	hypothetical protein	A0A0P0ZBT1	Stx2-converting_phage	5.0e-39	100.0
AUL90906.1\|3109851_3110349_-	DNA-binding protein	A0A0P0ZBU2	Stx2-converting_phage	3.6e-94	100.0
AUL90907.1\|3110548_3110986_-\|lysis	lysis protein	A0A0P0ZBQ9	Stx2-converting_phage	4.2e-70	96.6
AUL90908.1\|3110982_3111480_-	lysozyme	A0A0N7KZA0	Stx2-converting_phage	2.4e-90	97.0
AUL90909.1\|3111479_3111695_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	7.7e-33	98.6
AUL90910.1\|3111693_3111855_+	hypothetical protein	NA	NA	NA	NA
AUL90911.1\|3111978_3113829_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	98.5
AUL90912.1\|3114906_3115395_-	antiterminator	Q5TJL7	Enterobacteria_phage	7.7e-89	99.4
AUL90913.1\|3115385_3116057_-	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	1.6e-129	96.9
AUL90914.1\|3116053_3116659_-	protein NinG	Q5TJL9	Enterobacteria_phage	8.1e-96	99.0
AUL90915.1\|3116658_3117381_-	DNA-binding protein	O48426	Enterobacteria_phage	3.6e-127	96.7
AUL90916.1\|3117532_3118582_-	hypothetical protein	Q9T208	Enterobacteria_phage	1.3e-181	100.0
AUL90917.1\|3118763_3119291_-	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	2.3e-99	98.9
AUL90918.1\|3119287_3119746_-	recombination protein NinB	M1FPM8	Enterobacteria_phage	1.6e-80	100.0
AUL90919.1\|3119801_3120092_-	protein ren	A0A1I9LJP5	Stx_converting_phage	9.6e-47	100.0
AUL90920.1\|3120088_3120790_-	Replication protein P	K7P6G2	Enterobacteria_phage	8.4e-129	99.1
AUL90921.1\|3120786_3121725_-	Replication protein O	A0A1I9LJP3	Stx_converting_phage	1.3e-172	100.0
AUL90922.1\|3121757_3122054_-	hypothetical protein	Q6H9X8	Enterobacteria_phage	5.2e-48	100.0
AUL90923.1\|3122192_3122420_-	DNA-binding protein	G9L677	Escherichia_phage	7.8e-36	100.0
AUL90924.1\|3122498_3123206_+	phage repressor protein C	G9L676	Escherichia_phage	1.5e-133	100.0
AUL90925.1\|3123266_3123608_+	DUF3024 domain-containing protein	G9L675	Escherichia_phage	2.8e-61	98.2
AUL90926.1\|3123674_3124136_+	hypothetical protein	G9L674	Escherichia_phage	1.9e-76	99.3
AUL90927.1\|3124129_3125176_+	serine/threonine protein kinase	G9L673	Escherichia_phage	1.3e-205	99.4
AUL90928.1\|3125831_3126215_+	antitermination protein	G9L671	Escherichia_phage	3.9e-64	100.0
AUL90929.1\|3126328_3127541_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	8.4e-169	99.0
AUL90930.1\|3127586_3128057_+	hypothetical protein	A0A1U9AJ69	Stx1_converting_phage	1.7e-88	100.0
AUL90931.1\|3128207_3128576_+	DUF2528 domain-containing protein	A0A1U9AJB3	Stx1_converting_phage	2.0e-65	100.0
AUL90932.1\|3128655_3128895_+	host cell division inhibitory peptide Kil	A0A0P0ZAF7	Stx2-converting_phage	1.6e-31	100.0
AUL90933.1\|3128920_3130133_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7
AUL90934.1\|3130313_3130610_+	host-nuclease inhibitor protein Gam	Q9EYA6	Enterobacteria_phage	4.3e-50	100.0
AUL90935.1\|3130615_3131401_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
AUL90936.1\|3131397_3132078_+	exonuclease	B6DZ61	Enterobacteria_phage	3.0e-131	98.2
AUL90937.1\|3132074_3132257_+	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	6.9e-27	96.7
AUL90938.1\|3132229_3132421_+	hypothetical protein	A0A0P0ZC67	Stx2-converting_phage	2.1e-26	98.4
AUL90939.1\|3132431_3132713_+	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	7.2e-47	98.9
AUL90940.1\|3132811_3133033_+	conjugal transfer protein TraR	A0A1I9LJM6	Stx_converting_phage	2.9e-35	100.0
AUL90941.1\|3133029_3133800_+	hypothetical protein	Q6H9Z5	Enterobacteria_phage	6.2e-141	98.8
AUL93059.1\|3134290_3134551_+	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	1.5e-43	82.3
AUL90942.1\|3134638_3134881_+	DUF4222 domain-containing protein	B6DZ51	Enterobacteria_phage	1.5e-37	100.0
AUL90943.1\|3134884_3135019_+	hypothetical protein	A0A0P0ZDP5	Stx2-converting_phage	4.9e-22	100.0
AUL90944.1\|3135037_3135292_+	excisionase	Q859D3	Escherichia_coli_phage	3.0e-44	100.0
AUL90945.1\|3135325_3136612_+\|integrase	site-specific integrase	Q9EY96	Enterobacteria_phage	7.6e-253	100.0
AUL90946.1\|3136632_3137334_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	3.9e-102	99.5
AUL90947.1\|3137393_3137501_+	hypothetical protein	NA	NA	NA	NA
AUL90948.1\|3137481_3138213_-	osmoprotectant uptake system permease	NA	NA	NA	NA
AUL90949.1\|3138217_3139144_-	ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-24	35.1
3141400:3141415	attR	NA	NA	NA	NA

DBSCAN-SWA_16

3330182 : 3474849

168

Escherichia_phage(39.52%)

plate,portal,bacteriocin,transposase,lysis,tail,integrase,holin,tRNA,capsid,terminase

attL 3410009:3410025|attR 3457407:3457423

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL91103.1\|3330182_3331073_-\|transposase	ISNCY family transposase	Q2A0A7	Sodalis_phage	1.2e-66	43.9
AUL91104.1\|3331269_3332043_-	histidine transport ATP-binding protein HisP	G9BWD6	Planktothrix_phage	2.4e-23	38.1
AUL91105.1\|3332050_3332767_-	histidine ABC transporter permease	NA	NA	NA	NA
AUL91106.1\|3332763_3333450_-	histidine ABC transporter permease	NA	NA	NA	NA
AUL91107.1\|3333539_3334322_-	histidine ABC transporter substrate-binding protein HisJ	NA	NA	NA	NA
AUL91108.1\|3334542_3335325_-	lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT	NA	NA	NA	NA
AUL91109.1\|3335590_3336160_-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA	NA	NA	NA
AUL91110.1\|3336254_3337772_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.9e-87	44.0
AUL91111.1\|3337808_3338297_-	colicin V production protein	NA	NA	NA	NA
AUL91112.1\|3338555_3339218_-	SPOR domain-containing protein	NA	NA	NA	NA
AUL91113.1\|3339207_3340476_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
AUL91114.1\|3340545_3341460_-	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA
AUL91115.1\|3341615_3342275_-	protein DedA	NA	NA	NA	NA
AUL91116.1\|3342357_3343170_-\|tRNA	tRNA pseudouridine(38-40) synthase	NA	NA	NA	NA
AUL91117.1\|3343169_3344183_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AUL91118.1\|3344248_3345406_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	1.7e-22	29.3
AUL91119.1\|3346498_3347712_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7
AUL91120.1\|3347785_3348136_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	2.7e-59	99.1
AUL91121.1\|3348139_3349036_+\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	1.1e-154	97.7
AUL91122.1\|3349028_3349559_+\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	5.1e-94	99.4
AUL91123.1\|3349561_3352024_+\|tail	phage tail protein	A0A0A7NV63	Enterobacteria_phage	8.1e-110	97.2
AUL91124.1\|3352023_3352602_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.9e-95	88.5
AUL93069.1\|3352645_3353122_-	serine acetyltransferase	NA	NA	NA	NA
AUL91125.1\|3353374_3353869_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.1e-85	99.4
AUL91126.1\|3353875_3356683_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	95.8
AUL91127.1\|3356669_3356906_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	1.9e-21	96.1
AUL91128.1\|3356833_3357199_-\|tail	phage tail protein	A0A0A7NPZ0	Enterobacteria_phage	1.7e-56	98.3
AUL91129.1\|3357253_3357766_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	3.2e-93	100.0
AUL91130.1\|3357765_3358950_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	8.1e-225	99.0
AUL91131.1\|3359107_3359431_+\|tail	phage tail protein	A0A0A7NQ97	Enterobacteria_phage	1.1e-43	100.0
AUL91132.1\|3362792_3363053_+	hypothetical protein	NA	NA	NA	NA
AUL91133.1\|3363244_3363385_+	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	7.0e-19	100.0
AUL91134.1\|3363647_3363980_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
AUL91135.1\|3363984_3364878_+	type VI secretion protein	NA	NA	NA	NA
AUL91136.1\|3365146_3366142_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
AUL91137.1\|3366138_3367317_-	arabinose transporter	NA	NA	NA	NA
AUL91138.1\|3367258_3367480_+	hypothetical protein	NA	NA	NA	NA
AUL91139.1\|3367625_3368846_-	beta-ketoacyl-[acyl-carrier-protein] synthase I	NA	NA	NA	NA
AUL91140.1\|3369004_3371011_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
AUL91141.1\|3371131_3371410_-	YfcL family protein	NA	NA	NA	NA
AUL91142.1\|3371443_3371992_-	elongation factor P hydroxylase	NA	NA	NA	NA
AUL91143.1\|3371991_3372801_-	hypothetical protein	NA	NA	NA	NA
AUL91144.1\|3372800_3373625_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
AUL91145.1\|3373628_3374714_-	chorismate synthase	A0A291AU41	Pandoravirus	9.1e-90	48.4
AUL91146.1\|3374748_3375681_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AUL91147.1\|3375846_3376398_+	endonuclease SmrB	NA	NA	NA	NA
AUL91148.1\|3376519_3377377_-	DUF2544 domain-containing protein	NA	NA	NA	NA
AUL91149.1\|3377378_3377903_-	fimbrial protein	NA	NA	NA	NA
AUL91150.1\|3380884_3381448_-	type 1 fimbrial protein	NA	NA	NA	NA
AUL91151.1\|3382122_3382608_-	phosphohistidine phosphatase	NA	NA	NA	NA
AUL91152.1\|3382810_3384955_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
AUL91153.1\|3384954_3386265_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
AUL91154.1\|3386445_3386730_-	hypothetical protein	NA	NA	NA	NA
AUL91155.1\|3386814_3387066_-	hypothetical protein	NA	NA	NA	NA
AUL91156.1\|3387101_3388442_+	long-chain fatty acid transporter	NA	NA	NA	NA
AUL91157.1\|3388807_3389866_+	hypothetical protein	NA	NA	NA	NA
AUL91158.1\|3390047_3390803_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
AUL91159.1\|3390828_3390999_-	hypothetical protein	NA	NA	NA	NA
AUL91160.1\|3391096_3392029_+	hypothetical protein	E7DYY8	Enterobacteria_phage	2.1e-167	99.7
AUL91161.1\|3392250_3400602_-	hypothetical protein	Q08J70	Stx2-converting_phage	0.0e+00	94.3
AUL91162.1\|3400670_3401936_-	hypothetical protein	A0A1I9LJU3	Stx_converting_phage	9.9e-205	98.8
AUL91163.1\|3401946_3402198_-\|bacteriocin	bacteriocin	A0A2R2Z351	Escherichia_phage	7.9e-13	100.0
AUL91164.1\|3402207_3402654_-	hypothetical protein	A0A2R2Z357	Escherichia_phage	6.2e-77	100.0
AUL91165.1\|3402656_3403313_-	hypothetical protein	A0A2R2Z361	Escherichia_phage	2.4e-109	100.0
AUL91166.1\|3403406_3403808_-	hypothetical protein	A0A2R2Z359	Escherichia_phage	3.7e-73	100.0
AUL91167.1\|3403864_3404005_-	Hok/Gef family protein	A0A2R2X2B4	Escherichia_phage	3.1e-19	100.0
AUL91168.1\|3404061_3404307_+	hypothetical protein	Q7Y2U2	Escherichia_phage	5.7e-40	100.0
AUL91169.1\|3404237_3404972_-	outer membrane protein	A0A2R2Z365	Escherichia_phage	1.3e-135	100.0
AUL91170.1\|3405062_3405680_-	hypothetical protein	A0A2R2Z362	Escherichia_phage	1.1e-121	100.0
AUL91171.1\|3405685_3405964_-	outer membrane protein	A0A2R2Z367	Escherichia_phage	1.1e-50	100.0
AUL91172.1\|3405978_3407247_-	host specificity protein J	A0A2L1IV54	Escherichia_phage	2.6e-213	89.5
AUL91173.1\|3407243_3408869_-	hypothetical protein	A0A088CBK0	Shigella_phage	0.0e+00	99.8
AUL91174.1\|3409034_3409277_+	outer membrane protein	NA	NA	NA	NA
AUL91175.1\|3409172_3409406_-	hypothetical protein	A0A0N7CHY0	Escherichia_phage	1.6e-39	100.0
AUL91176.1\|3409490_3409760_-\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	6.4e-45	98.9
AUL91177.1\|3409761_3411699_-\|tail	phage tail protein	A0A1I9LJS9	Stx_converting_phage	1.1e-64	100.0
3410009:3410025	attL	NA	NA	NA	NA
AUL91178.1\|3411695_3412346_-	hypothetical protein	A0A0H4J3F2	Shigella_phage	3.9e-120	99.5
AUL91179.1\|3412345_3412909_-	hypothetical protein	A0A2R2Z349	Escherichia_phage	3.2e-102	100.0
AUL91180.1\|3412892_3413354_-	hypothetical protein	A0A2R2Z354	Escherichia_phage	7.8e-75	100.0
AUL91181.1\|3413403_3413793_-	hypothetical protein	A0A2R2Z353	Escherichia_phage	9.9e-63	100.0
AUL91182.1\|3413848_3415063_-\|capsid	N4-gp56 family major capsid protein	A0A2R2Z358	Escherichia_phage	1.3e-233	100.0
AUL91183.1\|3415086_3416094_-	hypothetical protein	A0A2R2Z355	Escherichia_phage	1.5e-179	99.7
AUL91184.1\|3416251_3418396_-\|portal	portal protein	A0A2R2Z346	Escherichia_phage	0.0e+00	99.9
AUL91185.1\|3418395_3420102_-\|terminase	terminase	A0A1U9AJA6	Stx1_converting_phage	0.0e+00	100.0
AUL91186.1\|3420082_3420889_-\|terminase	terminase	A0A1U9AJA9	Stx1_converting_phage	1.7e-133	100.0
AUL91187.1\|3421288_3421546_-	hypothetical protein	A0A0P0ZBT1	Stx2-converting_phage	5.0e-39	100.0
AUL93070.1\|3421542_3422040_-	DNA-binding protein	A0A0H4IPL1	Shigella_phage	2.4e-93	100.0
AUL91188.1\|3422220_3422688_-\|lysis	lysis protein	A0A0H4IT10	Shigella_phage	1.2e-78	100.0
AUL91189.1\|3422844_3423411_-	hypothetical protein	A0A0H4IQ87	Shigella_phage	1.4e-105	100.0
AUL91190.1\|3423685_3424219_-	lysozyme	V5USG4	Shigella_phage	7.9e-103	100.0
AUL91191.1\|3424223_3424439_-\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
AUL91192.1\|3424515_3424788_-	DUF826 domain-containing protein	A0A1I9LJR2	Stx_converting_phage	1.2e-22	100.0
AUL91193.1\|3424828_3425008_-	DUF1378 domain-containing protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
AUL91194.1\|3425142_3427080_-	sialate O-acetylesterase	A0A1I9LJQ8	Stx_converting_phage	0.0e+00	99.8
AUL91195.1\|3427206_3427434_-	hypothetical protein	Q5MBW5	Stx1-converting_phage	7.8e-28	98.3
AUL91196.1\|3427889_3428603_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUL93071.1\|3428641_3428821_+	hypothetical protein	NA	NA	NA	NA
AUL91197.1\|3430183_3430381_-	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	9.8e-27	96.9
AUL91198.1\|3430607_3431429_-	antitermination protein	K7P7B9	Enterobacteria_phage	4.1e-82	61.2
AUL91199.1\|3431425_3431803_-	RusA family crossover junction endodeoxyribonuclease	A5VW85	Enterobacteria_phage	1.1e-37	64.9
AUL91200.1\|3431799_3432090_-	DUF1364 domain-containing protein	K7PKV0	Enterobacteria_phage	3.4e-52	100.0
AUL91201.1\|3432089_3432812_-	DNA-binding protein	A0A0P0ZBS6	Stx2-converting_phage	3.0e-129	99.6
AUL91202.1\|3432886_3433564_-	phage antirepressor Ant	A0A0P0ZC44	Stx2-converting_phage	4.0e-128	98.7
AUL91203.1\|3433839_3434022_-	NinE family protein	A0A0N7C1X3	Escherichia_phage	5.7e-29	100.0
AUL91204.1\|3434018_3434546_-	phage N-6-adenine-methyltransferase	H6WZI7	Escherichia_phage	1.2e-100	99.4
AUL91205.1\|3434542_3434989_-	recombination protein NinB	A0A0N7C2V1	Escherichia_phage	2.4e-81	100.0
AUL91206.1\|3434945_3435182_-	restriction alleviation protein, Lar family	Q8HA09	Enterobacteria_phage	1.2e-39	100.0
AUL91207.1\|3435192_3435408_-	hypothetical protein	A0A1I9LJP7	Stx_converting_phage	1.3e-32	100.0
AUL91208.1\|3435540_3435819_-	hypothetical protein	Q9EYB9	Enterobacteria_phage	2.2e-48	98.9
AUL91209.1\|3435889_3437266_-	replicative DNA helicase	A0A0P0ZC27	Stx2-converting_phage	2.4e-252	99.1
AUL91210.1\|3437262_3438150_-	replication protein	A5VW95	Enterobacteria_phage	4.9e-142	98.0
AUL91211.1\|3438212_3438485_-	hypothetical protein	G9L679	Escherichia_phage	2.7e-43	100.0
AUL91212.1\|3438507_3438807_-	hypothetical protein	A0A0P0ZBJ0	Stx2-converting_phage	3.7e-49	99.0
AUL91213.1\|3438948_3439164_-	XRE family transcriptional regulator	A0A0N7C2U7	Escherichia_phage	2.2e-35	100.0
AUL91214.1\|3439239_3439935_+	phage repressor	A0A0N7BTS4	Escherichia_phage	8.6e-134	100.0
AUL91215.1\|3440436_3440958_+	hypothetical protein	A0A0N7BTU4	Escherichia_phage	1.8e-88	100.0
AUL91216.1\|3441068_3441230_-	hypothetical protein	A0A0P0ZCZ3	Stx2-converting_phage	2.7e-22	100.0
AUL91217.1\|3441526_3441709_+	hypothetical protein	A0A0N7C057	Escherichia_phage	2.8e-28	100.0
AUL91218.1\|3441686_3441959_+	antitermination protein N	A0A0N7C217	Escherichia_phage	5.7e-41	100.0
AUL91219.1\|3442018_3442489_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	1.8e-87	99.4
AUL91220.1\|3442687_3442927_+	host cell division inhibitory peptide Kil	K7PL44	Enterobacteria_phage	2.6e-37	97.5
AUL91221.1\|3442923_3443112_+	hypothetical protein	G9L668	Escherichia_phage	2.2e-28	100.0
AUL91222.1\|3443120_3443801_+	ATP-binding protein	G9L667	Escherichia_phage	3.4e-127	100.0
AUL91223.1\|3443797_3444385_+	DUF669 domain-containing protein	G9L666	Escherichia_phage	5.4e-105	99.0
AUL91224.1\|3444408_3444705_+	RecBCD nuclease inhibitor	A5VWB0	Enterobacteria_phage	9.5e-50	98.0
AUL91225.1\|3444715_3444880_+	DUF2737 domain-containing protein	A0A2I6PID4	Escherichia_phage	4.6e-22	98.1
AUL91226.1\|3444876_3445491_+	hypothetical protein	A0A0P0ZFU9	Escherichia_phage	9.2e-55	71.7
AUL91227.1\|3445487_3445898_+	hypothetical protein	A0A076G6X8	Escherichia_phage	2.0e-29	72.1
AUL91228.1\|3445906_3446566_+	hypothetical protein	A0A2I6TCG8	Escherichia_phage	3.4e-39	61.5
AUL91229.1\|3446562_3447333_+	hypothetical protein	Q08J58	Stx2-converting_phage	1.5e-142	100.0
AUL91230.1\|3447334_3447526_+	hypothetical protein	Q6H9Z6	Enterobacteria_phage	1.2e-26	100.0
AUL91231.1\|3447528_3448125_+	DUF551 domain-containing protein	Q6H9Z7	Enterobacteria_phage	6.3e-117	99.5
AUL91232.1\|3448220_3448949_+	hypothetical protein	A0A0P0ZD96	Stx2-converting_phage	7.9e-130	100.0
AUL91233.1\|3449272_3449911_+	phage antirepressor Ant	A0A0P0ZG08	Escherichia_phage	5.5e-119	99.5
AUL91234.1\|3449966_3450398_+	regulator	A0A2R2Z303	Escherichia_phage	2.1e-74	99.3
AUL91235.1\|3450394_3451021_+	adenine methylase	A0A2R2Z304	Escherichia_phage	1.0e-122	100.0
AUL91236.1\|3450980_3451193_+	hypothetical protein	A0A0P0ZGA1	Escherichia_phage	7.1e-31	100.0
AUL91237.1\|3451228_3451606_+	hypothetical protein	A0A2R2Z2X7	Escherichia_phage	1.7e-51	98.4
AUL91238.1\|3451684_3451867_+	DNA-binding protein	A0A2R2Z2X2	Escherichia_phage	4.1e-27	100.0
AUL91239.1\|3451850_3453020_-\|integrase	integrase	A0A2R2Z2Y0	Escherichia_phage	3.7e-230	99.7
AUL91240.1\|3453451_3454618_+\|integrase	integrase	Q716F9	Shigella_phage	1.6e-220	98.7
AUL91241.1\|3454714_3455413_-	T3SS effector protein NleD	NA	NA	NA	NA
AUL91242.1\|3455459_3455669_+	hypothetical protein	NA	NA	NA	NA
AUL91243.1\|3455643_3456525_-	T3SS effector protein NleH	A5LH48	Enterobacteria_phage	1.1e-144	89.4
AUL91244.1\|3456630_3456900_-\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	4.9e-45	98.9
AUL91245.1\|3458276_3458876_-	Ail/Lom family protein	A0A0P0ZE39	Stx2-converting_phage	8.2e-109	98.0
3457407:3457423	attR	NA	NA	NA	NA
AUL91246.1\|3458942_3459674_-	host specificity protein J	Q687E8	Enterobacteria_phage	4.2e-123	99.6
AUL91247.1\|3460060_3460276_-\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
AUL91248.1\|3460352_3460625_-	DUF826 domain-containing protein	A0A0P0ZC09	Stx2-converting_phage	4.8e-24	100.0
AUL91249.1\|3460665_3460845_-	DUF1378 domain-containing protein	A0A2R2Z345	Escherichia_phage	1.4e-24	96.6
AUL91250.1\|3460981_3462919_-	sialate O-acetylesterase	A0A0P0ZBP4	Stx2-converting_phage	0.0e+00	96.4
AUL91251.1\|3463629_3463782_-	DNA methylase	A0A2R2Z327	Escherichia_phage	4.0e-20	100.0
AUL91252.1\|3463796_3464042_+	hypothetical protein	A0A0P0ZGS0	Escherichia_phage	5.0e-36	100.0
AUL91253.1\|3464030_3464465_-	antitermination protein	Q777W5	Enterobacteria_phage	1.8e-81	99.3
AUL91254.1\|3464457_3464652_-	protein ninH	G9L694	Escherichia_phage	1.9e-30	100.0
AUL91255.1\|3464648_3465254_-	recombination protein NinG	Q8VNP2	Enterobacteria_phage	1.9e-97	100.0
AUL91256.1\|3465253_3465976_-	DNA-binding protein	A0A0P0ZCB2	Stx2-converting_phage	3.9e-129	99.6
AUL91257.1\|3466050_3466785_-	phage antirepressor Ant	A0A0N7C203	Escherichia_phage	5.5e-123	99.6
AUL91258.1\|3467145_3467841_-\|transposase	IS1 family transposase	A0A0U2RK18	Escherichia_phage	3.1e-131	97.8
AUL91259.1\|3467876_3468017_-	NinE family protein	A5VW90	Enterobacteria_phage	1.0e-14	100.0
AUL91260.1\|3468536_3468983_-	recombination protein NinB	A0A0N7C2V1	Escherichia_phage	2.4e-81	100.0
AUL91261.1\|3468939_3469176_-	restriction alleviation protein, Lar family	Q8HA09	Enterobacteria_phage	1.2e-39	100.0
AUL91262.1\|3469186_3469402_-	hypothetical protein	A0A1I9LJP7	Stx_converting_phage	1.3e-32	100.0
AUL91263.1\|3469534_3469813_-	hypothetical protein	Q9ZWY1	Enterobacteria_phage	3.4e-49	100.0
AUL91264.1\|3469883_3470174_-	protein ren	A0A1I9LJP5	Stx_converting_phage	9.6e-47	100.0
AUL91265.1\|3470170_3470872_-	Replication protein P	A0A1U9AJJ8	Stx1_converting_phage	3.4e-130	100.0
AUL93072.1\|3470868_3471420_-	replication protein O	M1FN81	Enterobacteria_phage	9.6e-104	99.5
AUL91266.1\|3473415_3474849_+	glycosyl hydrolase family 32	F8WPR5	Bacillus_phage	9.1e-29	25.4

DBSCAN-SWA_17

3695666 : 3782630

Salmonella_phage(60.66%)

plate,portal,head,tail,integrase,tRNA,capsid

attL 3739356:3739400|attR 3774390:3774434

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL91457.1\|3695666_3696404_-\|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	NA	NA	NA	NA
AUL91458.1\|3696535_3697864_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.9e-45	30.8
AUL91459.1\|3698072_3698954_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUL91460.1\|3699056_3699644_+	cysteine/O-acetylserine efflux protein	NA	NA	NA	NA
AUL91461.1\|3699699_3700083_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	1.4e-32	72.0
AUL91462.1\|3700385_3701075_+	uracil-DNA glycosylase	A0A1L2JU97	Alcelaphine_gammaherpesvirus	1.3e-54	51.5
AUL91463.1\|3701122_3702160_-	methyltransferase	NA	NA	NA	NA
AUL91464.1\|3702149_3702353_-	hypothetical protein	NA	NA	NA	NA
AUL91465.1\|3702366_3702786_+	thiol disulfide reductase thioredoxin	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
AUL93077.1\|3702854_3703553_+	DTW domain-containing protein YfiP	NA	NA	NA	NA
AUL91466.1\|3703584_3706245_+	protein lysine acetyltransferase	NA	NA	NA	NA
AUL91467.1\|3706358_3707714_+	phosphatidylserine synthase	NA	NA	NA	NA
AUL91468.1\|3707759_3708083_+	lipoprotein	NA	NA	NA	NA
AUL91469.1\|3708079_3709378_-	MFS transporter	Q6JIH2	Burkholderia_virus	1.3e-45	32.2
AUL91470.1\|3709359_3709473_-	alpha-ketoglutarate permease	NA	NA	NA	NA
AUL91471.1\|3715154_3717728_-	chaperone protein ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
AUL91472.1\|3717857_3718589_-	laccase domain-containing protein	NA	NA	NA	NA
AUL91473.1\|3718585_3719566_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
AUL91474.1\|3719700_3720438_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AUL91475.1\|3720467_3720674_+	hypothetical protein	NA	NA	NA	NA
AUL91476.1\|3720708_3721050_+	ribosome-associated inhibitor A	NA	NA	NA	NA
AUL91477.1\|3721300_3722461_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AUL91478.1\|3722503_3723625_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AUL91479.1\|3723635_3724706_-	3-deoxy-7-phosphoheptulonate synthase	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.0e-90	51.2
AUL91480.1\|3724915_3725281_+	hypothetical protein	NA	NA	NA	NA
AUL91481.1\|3725430_3725949_+	DUF4154 domain-containing protein	NA	NA	NA	NA
AUL91482.1\|3725938_3727165_+	diguanylate cyclase	NA	NA	NA	NA
AUL91483.1\|3727180_3727663_+	hypothetical protein	NA	NA	NA	NA
AUL91484.1\|3727739_3728087_-	50S ribosomal protein L19	NA	NA	NA	NA
AUL91485.1\|3728128_3728896_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AUL91486.1\|3728926_3729475_-	ribosome maturation factor RimM	NA	NA	NA	NA
AUL91487.1\|3729493_3729742_-	30S ribosomal protein S16	NA	NA	NA	NA
AUL91488.1\|3729878_3731240_-	signal recognition particle protein	NA	NA	NA	NA
AUL93078.1\|3731406_3732198_+	inner membrane protein YpjD	NA	NA	NA	NA
AUL93079.1\|3732263_3733505_+	magnesium/cobalt efflux protein	NA	NA	NA	NA
AUL91489.1\|3733559_3734153_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
AUL91490.1\|3734149_3734344_-	molecular chaperone GrpE	NA	NA	NA	NA
AUL91491.1\|3734275_3735154_+	NAD(+) kinase	NA	NA	NA	NA
AUL91492.1\|3735239_3736901_+	DNA repair protein RecN	NA	NA	NA	NA
AUL91493.1\|3737049_3737391_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AUL91494.1\|3737452_3737743_-	RnfH family protein	NA	NA	NA	NA
AUL91495.1\|3737732_3738209_-	ubiquinone-binding protein	NA	NA	NA	NA
AUL91496.1\|3738340_3738823_+	SsrA-binding protein	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
3739356:3739400	attL	NA	NA	NA	NA
AUL91497.1\|3739523_3740006_+	hypothetical protein	Q19UP0	Mannheimia_phage	2.7e-17	34.3
AUL93080.1\|3740032_3740251_-	levansucrase regulator	Q53ZE7	Salmonella_virus	7.5e-28	77.8
AUL91498.1\|3740319_3741420_-	late control protein D	A0A1S6KZZ5	Salmonella_phage	3.4e-177	88.5
AUL91499.1\|3741416_3741902_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	8.3e-67	80.6
AUL91500.1\|3741898_3745060_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	1.8e-308	59.6
AUL91501.1\|3745052_3745172_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
AUL91502.1\|3745186_3745489_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
AUL91503.1\|3745543_3746059_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	2.1e-89	95.3
AUL91504.1\|3746068_3747241_-\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	2.1e-204	90.3
AUL91505.1\|3747383_3747950_-	DNA-invertase	A0A0F7LA37	Escherichia_phage	3.2e-86	86.3
AUL93081.1\|3748022_3748526_+\|tail	phage tail protein	Q9MCR6	Enterobacteria_phage	1.8e-40	54.3
AUL91506.1\|3748525_3749128_+\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	6.6e-98	89.4
AUL91507.1\|3749099_3749540_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	4.7e-53	69.7
AUL91508.1\|3749566_3750967_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	7.5e-153	78.4
AUL91509.1\|3750963_3751569_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.8e-111	93.0
AUL91510.1\|3751561_3752470_-\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	1.3e-142	90.1
AUL91511.1\|3752456_3752816_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	2.8e-51	85.7
AUL91512.1\|3752812_3753391_-\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	8.8e-92	85.9
AUL91513.1\|3753459_3753906_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.1e-62	84.9
AUL91514.1\|3753898_3754330_-\|tail	phage tail protein	E5G6N3	Salmonella_phage	1.3e-71	93.0
AUL91515.1\|3754292_3754496_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	3.0e-23	76.1
AUL91516.1\|3754425_3754854_-	hypothetical protein	E5G6N2	Salmonella_phage	4.2e-46	75.2
AUL91517.1\|3754850_3755228_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.1e-15	39.2
AUL93082.1\|3755229_3755703_-	lysozyme	E5G6N1	Salmonella_phage	3.7e-80	91.0
AUL91518.1\|3755722_3755938_-	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
AUL91519.1\|3755941_3756145_-\|tail	phage tail protein	E5G6M9	Salmonella_phage	1.4e-31	92.5
AUL91520.1\|3756144_3756609_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	7.9e-75	88.3
AUL91521.1\|3756704_3757355_-	hypothetical protein	E5G6M7	Salmonella_phage	4.7e-110	94.0
AUL91522.1\|3757358_3758417_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.4e-180	93.1
AUL91523.1\|3758433_3759267_-\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	8.2e-123	91.0
AUL91524.1\|3759409_3761176_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.5
AUL91525.1\|3761175_3762201_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	2.1e-173	88.1
AUL91526.1\|3762246_3762540_-	hypothetical protein	NA	NA	NA	NA
AUL91527.1\|3763023_3764916_-	NTPase KAP	NA	NA	NA	NA
AUL91528.1\|3765237_3765543_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AUL93083.1\|3765481_3765670_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
AUL91529.1\|3765823_3768238_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.8
AUL91530.1\|3768234_3769092_-	DNA adenine methylase	E5G6L8	Salmonella_phage	7.8e-161	96.8
AUL91531.1\|3769088_3769391_-	DUF3850 domain-containing protein	A0A0A8WI22	Clostridium_phage	9.8e-10	42.1
AUL91532.1\|3769387_3769615_-	hypothetical protein	E5G6L7	Salmonella_phage	2.7e-36	100.0
AUL91533.1\|3769614_3769848_-	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	6.4e-33	98.7
AUL91534.1\|3769915_3770257_-	hypothetical protein	E5G6L5	Salmonella_phage	6.6e-55	97.3
AUL91535.1\|3770374_3770671_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	4.9e-22	90.4
AUL91536.1\|3770678_3771188_-	hypothetical protein	E5G6L3	Salmonella_phage	7.3e-82	94.1
AUL91537.1\|3771220_3771463_-	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	6.8e-38	97.5
AUL91538.1\|3771586_3772216_+	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	2.1e-62	55.5
AUL91539.1\|3772219_3773239_+\|integrase	integrase	E5G6L0	Salmonella_phage	6.4e-186	94.0
AUL91540.1\|3773241_3774273_+	hypothetical protein	NA	NA	NA	NA
AUL91541.1\|3774705_3774954_+	damage-inducible protein DinI	A5LH55	Enterobacteria_phage	5.4e-38	98.8
3774390:3774434	attR	NA	NA	NA	NA
AUL91542.1\|3775114_3775756_-	DUF1076 domain-containing protein	B6DZC0	Enterobacteria_phage	4.8e-107	98.6
AUL91543.1\|3775837_3776467_-	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	2.1e-78	92.2
AUL91544.1\|3776539_3777121_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	2.1e-48	55.3
AUL91545.1\|3777231_3777501_-\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	4.9e-45	98.9
AUL91546.1\|3777502_3778816_-\|tail	phage tail protein	H6WZM9	Escherichia_phage	5.9e-75	97.0
AUL91547.1\|3778967_3779567_-	Ail/Lom family protein	A0A0P0ZE39	Stx2-converting_phage	3.1e-108	96.5
AUL91548.1\|3780857_3782630_+	hypothetical protein	A0A1U9AJG3	Stx1_converting_phage	0.0e+00	98.8

DBSCAN-SWA_18

5294529 : 5302459

Enterobacteria_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUL92891.1\|5294529_5295063_+	hypothetical protein	K7PKJ4	Enterobacteria_phage	5.3e-99	99.4
AUL92892.1\|5295480_5295762_-	pyocin activator protein PrtN	K7PGU0	Enterobacteria_phage	2.8e-43	96.8
AUL92893.1\|5295798_5296371_-	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	2.4e-110	100.0
AUL92894.1\|5297380_5297572_-	hypothetical protein	K7PKJ7	Enterobacteria_phage	1.6e-26	98.4
AUL92895.1\|5297573_5298128_-	hypothetical protein	K7PJQ4	Enterobacteria_phage	4.1e-102	99.5
AUL92896.1\|5298124_5298364_-	hypothetical protein	S5MQM0	Escherichia_phage	4.4e-37	100.0
AUL92897.1\|5298356_5298560_-	hypothetical protein	K7PLX1	Enterobacteria_phage	5.2e-31	98.5
AUL92898.1\|5298556_5298919_-	hypothetical protein	S5MC15	Escherichia_phage	2.1e-67	99.2
AUL92899.1\|5298909_5299446_-	HD family hydrolase	S5MW55	Escherichia_phage	7.4e-101	100.0
AUL92900.1\|5299573_5300398_-	DUF2303 domain-containing protein	U5P439	Shigella_phage	6.0e-150	100.0
AUL92901.1\|5300462_5300825_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
AUL92902.1\|5300897_5301092_+	hypothetical protein	A0A291AWX8	Escherichia_phage	1.0e-31	100.0
AUL92903.1\|5301193_5301424_-	hypothetical protein	A0A291AWY6	Escherichia_phage	2.5e-13	97.4
AUL92904.1\|5301493_5302168_-	LexA family transcriptional repressor	U5P0T5	Shigella_phage	8.6e-131	99.1
AUL92905.1\|5302258_5302459_+	transcriptional regulator	U5P445	Shigella_phage	7.9e-32	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP024617

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP024618

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection