CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP019203	Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence	0 crisprs	NA	0	0	1	0
CP019202	Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 chromosome, complete genome	2 crisprs	PD-DExK,csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	0	30	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP019202_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019202_1

964246-965862

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

26 spacers

cas3,cas8e

The CRISPR arrays of CP019202_1

>merge|CP019202|1|964246-965862|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTCGTACACCAGCGCTTTACCGGAGTGTCCGTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGATCAAATATCAGATAACCCCCGTCGGCAAACCGTGTTCCCCGCGCCAGCGGGGATAAACCGATCACATTCCTGAAAAATGACTCCCTTAGCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGAAGATATTGAAAGCGCCCAATCTTCCCAGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCAGCATTGACGCGAACCCTGCGCCGCTGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTGAAATATTGCTATTTCCGAAGGGGCTGATGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCCGCCTGAACAAAATCGACCACGTTATTAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTCCCGCGGGCGCTCCTGTTGGCCAGCATCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCCAATACGAGCTGAGTGCGCACGCCCTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGATCGACCGCCTGGAGGTTGAGGTGGTTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTGGATTGATTCTGATCGCCGTGGGCGGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGAAACAGAGATCGCGTCCGATAATGCCGACATGTGTTCCCCGCGCCAGCGGGGATAAACCGAGAATATTCAACTCCAGCGGGAAAAAGACGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAACTTTCATCAAACTGGATCGAAGGGCCACTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGTTTTAGCTCGCTGGAAACCTCGCTTTTGGTGTTCCCCGCGCCAGCGGGGATAAACCGACGCCGAGGGTGAATATTTAGACCGGGACGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGATCATCAATGTGGGAAGTTATCACAACGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAAATTCAGCGTCTGGAATGCAAGGATTTTGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTATATCCCCGAATCGTGCGCTACGTGAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGACGAGGTCATTTTCAGCACTCGTCAGGCGCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGATGCCCTGTTCGGCAAAATCCCGCCACGCTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTAAAACCGGTGCTGGATTTTGATGAAGACGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCATTCAACATCGCACTTAAGAACTTGTGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGATATTTATCCAGACTGTCGGACAGGGTGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTCATCGGGAGCCAACGCCGCGAGAATACGCGTGTTCCCCGCGCCAGCGGGGATAAACCCAGCACAATCATTATTAGATGAACTTTCATCAAGTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP019202|1|1|964246-965801|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTACACCAGCGCTTTACCGGAGTGTCCGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCAAATATCAGATAACCCCCGTCGGCAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCACATTCCTGAAAAATGACTCCCTTAGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGATATTGAAAGCGCCCAATCTTCCCAGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCAGCATTGACGCGAACCCTGCGCCGCTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGAAATATTGCTATTTCCGAAGGGGCTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCCGCCTGAACAAAATCGACCACGTTATTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCCCGCGGGCGCTCCTGTTGGCCAGCATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCAATACGAGCTGAGTGCGCACGCCCTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCGACCGCCTGGAGGTTGAGGTGGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGGATTGATTCTGATCGCCGTGGGCGGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAACAGAGATCGCGTCCGATAATGCCGACAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAATATTCAACTCCAGCGGGAAAAAGACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTTTCATCAAACTGGATCGAAGGGCCACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTTTTAGCTCGCTGGAAACCTCGCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCGAGGGTGAATATTTAGACCGGGACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATCATCAATGTGGGAAGTTATCACAACGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAAATTCAGCGTCTGGAATGCAAGGATTTTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTATATCCCCGAATCGTGCGCTACGTGAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGAGGTCATTTTCAGCACTCGTCAGGCGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGCCCTGTTCGGCAAAATCCCGCCACGCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAACCGGTGCTGGATTTTGATGAAGACGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATTCAACATCGCACTTAAGAACTTGTGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATATTTATCCAGACTGTCGGACAGGGTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCATCGGGAGCCAACGCCGCGAGAATACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCC

>CP019202|1|1|964246-965862|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTACACCAGCGCTTTACCGGAGTGTCCGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCAAATATCAGATAACCCCCGTCGGCAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCACATTCCTGAAAAATGACTCCCTTAGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGATATTGAAAGCGCCCAATCTTCCCAGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCAGCATTGACGCGAACCCTGCGCCGCTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGAAATATTGCTATTTCCGAAGGGGCTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCCGCCTGAACAAAATCGACCACGTTATTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCCCGCGGGCGCTCCTGTTGGCCAGCATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCAATACGAGCTGAGTGCGCACGCCCTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCGACCGCCTGGAGGTTGAGGTGGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGGATTGATTCTGATCGCCGTGGGCGGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAACAGAGATCGCGTCCGATAATGCCGACAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAATATTCAACTCCAGCGGGAAAAAGACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTTTCATCAAACTGGATCGAAGGGCCACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTTTTAGCTCGCTGGAAACCTCGCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCGAGGGTGAATATTTAGACCGGGACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATCATCAATGTGGGAAGTTATCACAACGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAAATTCAGCGTCTGGAATGCAAGGATTTTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTATATCCCCGAATCGTGCGCTACGTGAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGAGGTCATTTTCAGCACTCGTCAGGCGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGCCCTGTTCGGCAAAATCCCGCCACGCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAACCGGTGCTGGATTTTGATGAAGACGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATTCAACATCGCACTTAAGAACTTGTGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATATTTATCCAGACTGTCGGACAGGGTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCATCGGGAGCCAACGCCGCGAGAATACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCC	AGCACAATCATTATTAGATGAACTTTCATCAA
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP019202|1|1|964246-965862|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTACACCAGCGCTTTACCGGAGTGTCCGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCAAATATCAGATAACCCCCGTCGGCAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCACATTCCTGAAAAATGACTCCCTTAGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGATATTGAAAGCGCCCAATCTTCCCAGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCAGCATTGACGCGAACCCTGCGCCGCTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGAAATATTGCTATTTCCGAAGGGGCTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCCGCCTGAACAAAATCGACCACGTTATTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCCCGCGGGCGCTCCTGTTGGCCAGCATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCAATACGAGCTGAGTGCGCACGCCCTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCGACCGCCTGGAGGTTGAGGTGGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGGATTGATTCTGATCGCCGTGGGCGGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAACAGAGATCGCGTCCGATAATGCCGACAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAATATTCAACTCCAGCGGGAAAAAGACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTTTCATCAAACTGGATCGAAGGGCCACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTTTTAGCTCGCTGGAAACCTCGCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCGAGGGTGAATATTTAGACCGGGACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATCATCAATGTGGGAAGTTATCACAACGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAAATTCAGCGTCTGGAATGCAAGGATTTTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTATATCCCCGAATCGTGCGCTACGTGAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGAGGTCATTTTCAGCACTCGTCAGGCGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGCCCTGTTCGGCAAAATCCCGCCACGCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAACCGGTGCTGGATTTTGATGAAGACGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATTCAACATCGCACTTAAGAACTTGTGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATATTTATCCAGACTGTCGGACAGGGTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCATCGGGAGCCAACGCCGCGAGAATACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCC	AGCACAATCATTATTAGATGAACTTTCATCAA
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP019202.1\|AUM53169.1\|963277_963949_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP019202.1\|AUM53161.1\|954041_955337_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase	unknown	unknown	gnl\|CDD\|237291
CP019202.1\|AUM53163.1\|957706_958063_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|226136
CP019202.1\|AUM53172.1\|967630_969430_+\|sulfite-reductase-[NADPH]-flavoprotein,-alpha-component	unknown	unknown	gnl\|CDD\|182862
CP019202.1\|AUM53171.1\|966844_967207_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP019202.1\|AUM53173.1\|969429_971142_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402
CP019202.1\|AUM53168.1\|961843_963142_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP019202.1\|AUM56495.1\|971098_971317_-\|hypothetical-protein	unknown	unknown	unknown
CP019202.1\|AUM53177.1\|976262_977819_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP019202.1\|AUM53175.1\|972190_973144_-\|pathogenicity-island-1-effector-protein-SopD	unknown	unknown	gnl\|CDD\|185277
CP019202.1\|AUM53164.1\|958028_958325_+\|plasmid-stabilization-protein-ParE	unknown	unknown	gnl\|CDD\|226194
CP019202.1\|AUM53165.1\|958334_958487_-\|fimbrial-assembly-protein	unknown	unknown	gnl\|CDD\|185169
CP019202.1\|AUM53160.1\|951227_953984_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
CP019202.1\|AUM53174.1\|971243_971978_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP019202.1\|AUM53176.1\|973587_976251_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP019202.1\|AUM53170.1\|965959_966757_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP019202.1\|AUM53166.1\|959095_959896_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP019202.1\|AUM53167.1\|960123_961761_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP019202.1\|AUM56494.1\|967135_967306_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP019202.1\|AUM53162.1\|955388_957623_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797

Protein	Function_ID	Function_description	E-value
CP019202.1\|AUM53169.1\|963277_963949_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP019202.1\|AUM53161.1\|954041_955337_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
CP019202.1\|AUM53163.1\|957706_958063_+\|transcriptional-regulator	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
CP019202.1\|AUM53172.1\|967630_969430_+\|sulfite-reductase-[NADPH]-flavoprotein,-alpha-component	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP019202.1\|AUM53171.1\|966844_967207_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP019202.1\|AUM53173.1\|969429_971142_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP019202.1\|AUM53168.1\|961843_963142_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP019202.1\|AUM53177.1\|976262_977819_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP019202.1\|AUM53175.1\|972190_973144_-\|pathogenicity-island-1-effector-protein-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP019202.1\|AUM53164.1\|958028_958325_+\|plasmid-stabilization-protein-ParE	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	2.05732e-13
CP019202.1\|AUM53165.1\|958334_958487_-\|fimbrial-assembly-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	2.03735e-21
CP019202.1\|AUM53160.1\|951227_953984_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
CP019202.1\|AUM53174.1\|971243_971978_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.73232e-139
CP019202.1\|AUM53176.1\|973587_976251_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
CP019202.1\|AUM53170.1\|965959_966757_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	7.09684e-101
CP019202.1\|AUM53166.1\|959095_959896_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
CP019202.1\|AUM53167.1\|960123_961761_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP019202.1\|AUM53162.1\|955388_957623_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0

>CP019202.1|AUM53169.1|963277_963949_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP019202.1|AUM53168.1|961843_963142_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP019202.1|AUM53167.1|960123_961761_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>CP019202.1|AUM53166.1|959095_959896_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP019202.1|AUM53165.1|958334_958487_-|fimbrial-assembly-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLVF
>CP019202.1|AUM53164.1|958028_958325_+|plasmid-stabilization-protein-ParE
MRMVKLTPKASEDLENIWHYGWQHFGEIQADRYINHLSEIFSIMSANNIGTPRLELGEYIYALPFERHIIYFIQSVTEVIVIRILSQHQDSGKHVNWL
>CP019202.1|AUM53163.1|957706_958063_+|transcriptional-regulator
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>CP019202.1|AUM53162.1|955388_957623_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>CP019202.1|AUM53161.1|954041_955337_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVQALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>CP019202.1|AUM53160.1|951227_953984_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>CP019202.1|AUM53170.1|965959_966757_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDMSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLDITRKIKKLSREVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTMWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP019202.1|AUM53171.1|966844_967207_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP019202.1|AUM56494.1|967135_967306_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGY
>CP019202.1|AUM53172.1|967630_969430_+|sulfite-reductase-[NADPH]-flavoprotein,-alpha-component
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGSVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP019202.1|AUM53173.1|969429_971142_+|sulfite-reductase-subunit-beta
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLLLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKVKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAELGLVGKAPGRYNVHLGGNRMGTRIPRMYRENITESEILDSVDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP019202.1|AUM56495.1|971098_971317_-|hypothetical-protein
MVSANASTRSTFGSSFRAFRSSLDISSSRYTLPDGASLIRPTRAVGRIRHLCRHPAIQVIPRNHARDRAPGE
>CP019202.1|AUM53174.1|971243_971978_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP019202.1|AUM53175.1|972190_973144_-|pathogenicity-island-1-effector-protein-SopD
MPVTLSFGNHQNYMLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNIEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP019202.1|AUM53176.1|973587_976251_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>CP019202.1|AUM53177.1|976262_977819_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAEMPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE

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Crispr_ID: CP019202_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019202_2

982144-984040

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCNAGCGGGGATAAACCG	CRT

30 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP019202_2

>merge|CP019202|2|982144-984040|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGCGGAATACCACTATATAAAGCCCCTCAACCCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTTTACAAAAACTGGCCCCCTGAATTCATCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGATTTTAATGGCGGGCGAATTGTATTTAACGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTCCTGTAACATTCCGATATATAATTCTCCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCCAATTGCCGGCGACGGTTTCCATGTCAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGCGAAACAGGCCAGAGAACGCGAATTGCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTGTTCGATGTAGGTTTCTTCCTGAAGGCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTACCAGGCCCGTTTGTCTCAACCATGACCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGGCATGGCTGGCGACGTAGCGAACAAAATCGTGTTCCCCGCGCCAGCGGGGATAAACCGCATAAATTACTCGATGCGTACCTGTGAAATCTGTGTTCCCCGCGCCAGCGGGGATAAACCGATACAGTAGCAAAATAAAAAGGCCGCGTGAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAATGCCGTTTTGCCCGAGTTTTCACCGCCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCTATTGCCGGGGGTCGAGATGGCCGCCTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGATCCGCGCCTATGACGCAATGGTAACGACGTGTTCCCCGCGCCAGCGGGGATAAACCTGTAGCGCAGGGACTGGCAACGGTGCCGGGCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGAGACGGCCAGCCGCACCGGTGGCGGTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGTTTTATTCGACCTGAAAAAATGGATCGTGTGTTCCCCGCGCTAGCGGGGATAAACCGACATCTCGCGGACAATAGCGATTTCCACCGTCGTGTTCCCCGCGCTAGCGGGGATAAACCGCGTTTCGTTCATTTATTTAGTTTCCTGTTTCGGTGTTCCCCGCGCTAGCGGGGATAAACCCCTTGTTAAATACAGGCGGCGGCGGGGTTGGTGTTCCCCGCGCTAGCGGGGATAAACCGAACGGCGACGGGATCGTTTTTTGTGGCGAAAAGTGTTCCCCGCGCTAGCGGGGATAAACCGCAGGATTGGATTAATGAAGACGGGTACGAAATGTGTTCCCCGCGCTAGCGGGGATAAACCGAGATTGCAGAATTATATTTCACGCTGGCAGCAGTGTTCCCCGCGCTAGCGGGGATAAACCGCTGTTGTTATGCGTTGGATCGTAATAGTTAACGTGTTCCCCGCGCTAGCGGGGATAAACCGCTTGGCAGGGCTGCGCCGCAATGGCAGCAACAGTGTTCCCCGCGCTAGCGGGGATAAACCGGTCTTATAAATTGGGCTGATAGTGCCGCTGATGTGTTCCCCGCGCCAGCGGGGATAAACCGTACCTGCCGGGACTGGAGTGCAGGTAACCCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCCAGCCATTTAAACAGCGCTGCAGCGGGGATAAACCGACAGGGTATATGAGCTTATACGTCATGAACCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGTTGGTGGCGTTCGTCACCTGGCTGTCGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGACAAGGGCTGAAAAATGTTCCCCGCGTCAGCGGGGATAAACAC

>CP019202|2|2|982144-982539|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGAATACCACTATATAAAGCCCCTCAACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTACAAAAACTGGCCCCCTGAATTCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTTAATGGCGGGCGAATTGTATTTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTCCTGTAACATTCCGATATATAATTCTCCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCCAATTGCCGGCGACGGTTTCCATGTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCGAAACAGGCCAGAGAACGCGAATTGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>CP019202|2|2|982144-984040|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGAATACCACTATATAAAGCCCCTCAACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTACAAAAACTGGCCCCCTGAATTCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTTAATGGCGGGCGAATTGTATTTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTCCTGTAACATTCCGATATATAATTCTCCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCCAATTGCCGGCGACGGTTTCCATGTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCGAAACAGGCCAGAGAACGCGAATTGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTTCGATGTAGGTTTCTTCCTGAAGGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTACCAGGCCCGTTTGTCTCAACCATGACCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGGCATGGCTGGCGACGTAGCGAACAAAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAAATTACTCGATGCGTACCTGTGAAATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATACAGTAGCAAAATAAAAAGGCCGCGTGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATGCCGTTTTGCCCGAGTTTTCACCGCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTATTGCCGGGGGTCGAGATGGCCGCCTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATCCGCGCCTATGACGCAATGGTAACGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTAGCGCAGGGACTGGCAACGGTGCCGGGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGAGACGGCCAGCCGCACCGGTGGCGGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGTTTTATTCGACCTGAAAAAATGGATCGT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ACATCTCGCGGACAATAGCGATTTCCACCGTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGTTTCGTTCATTTATTTAGTTTCCTGTTTCG
GTGTTCCCCGCGCTAGCGGGGATAAACCC	CTTGTTAAATACAGGCGGCGGCGGGGTTG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AACGGCGACGGGATCGTTTTTTGTGGCGAAAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGGATTGGATTAATGAAGACGGGTACGAAAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGATTGCAGAATTATATTTCACGCTGGCAGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTGTTGTTATGCGTTGGATCGTAATAGTTAAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTTGGCAGGGCTGCGCCGCAATGGCAGCAACA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTCTTATAAATTGGGCTGATAGTGCCGCTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCTGCCGGGACTGGAGTGCAGGTAACCCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCCAGCCATTTAAACAGCGCTGCAGCGGGGATAAACCGACAGGGTATATGAGCTTATACGTCATGAACCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTTGGTGGCGTTCGTCACCTGGCTGTCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

>CP019202|2|2|982144-983817|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGAATACCACTATATAAAGCCCCTCAACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTACAAAAACTGGCCCCCTGAATTCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTTAATGGCGGGCGAATTGTATTTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTCCTGTAACATTCCGATATATAATTCTCCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCCAATTGCCGGCGACGGTTTCCATGTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCGAAACAGGCCAGAGAACGCGAATTGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTTCGATGTAGGTTTCTTCCTGAAGGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTACCAGGCCCGTTTGTCTCAACCATGACCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGGCATGGCTGGCGACGTAGCGAACAAAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAAATTACTCGATGCGTACCTGTGAAATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATACAGTAGCAAAATAAAAAGGCCGCGTGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATGCCGTTTTGCCCGAGTTTTCACCGCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTATTGCCGGGGGTCGAGATGGCCGCCTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATCCGCGCCTATGACGCAATGGTAACGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTAGCGCAGGGACTGGCAACGGTGCCGGGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGAGACGGCCAGCCGCACCGGTGGCGGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGTTTTATTCGACCTGAAAAAATGGATCGT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ACATCTCGCGGACAATAGCGATTTCCACCGTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGTTTCGTTCATTTATTTAGTTTCCTGTTTCG
GTGTTCCCCGCGCTAGCGGGGATAAACCC	CTTGTTAAATACAGGCGGCGGCGGGGTTG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AACGGCGACGGGATCGTTTTTTGTGGCGAAAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGGATTGGATTAATGAAGACGGGTACGAAAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGATTGCAGAATTATATTTCACGCTGGCAGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTGTTGTTATGCGTTGGATCGTAATAGTTAAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTTGGCAGGGCTGCGCCGCAATGGCAGCAACA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTCTTATAAATTGGGCTGATAGTGCCGCTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCTGCCGGGACTGGAGTGCAGGTAACCCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
CP019202.1\|AUM53181.1\|980186_980837_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP019202.1\|AUM53193.1\|991411_992173_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP019202.1\|AUM53185.1\|985351_986260_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP019202.1\|AUM53182.1\|980833_981754_+\|subtype-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP019202.1\|AUM53191.1\|989905_990385_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP019202.1\|AUM53180.1\|979458_980205_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP019202.1\|AUM53188.1\|988318_988675_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371891
CP019202.1\|AUM53178.1\|977815_978376_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
CP019202.1\|AUM53183.1\|981753_982047_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP019202.1\|AUM53177.1\|976262_977819_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP019202.1\|AUM53175.1\|972190_973144_-\|pathogenicity-island-1-effector-protein-SopD	unknown	unknown	gnl\|CDD\|185277
CP019202.1\|AUM53187.1\|987695_988301_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP019202.1\|AUM53184.1\|984054_985101_-\|Zn-dependent-exopeptidase-M28	unknown	unknown	gnl\|CDD\|182299
CP019202.1\|AUM53189.1\|988865_989177_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP019202.1\|AUM53186.1\|986269_987709_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
CP019202.1\|AUM53176.1\|973587_976251_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP019202.1\|AUM53174.1\|971243_971978_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP019202.1\|AUM53190.1\|989195_989906_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP019202.1\|AUM53192.1\|990381_991431_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP019202.1\|AUM53179.1\|978389_979448_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843

Protein	Function_ID	Function_description	E-value
CP019202.1\|AUM53181.1\|980186_980837_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	2.31556e-75
CP019202.1\|AUM53193.1\|991411_992173_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.66927e-145
CP019202.1\|AUM53185.1\|985351_986260_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP019202.1\|AUM53182.1\|980833_981754_+\|subtype-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	7.95508e-157
CP019202.1\|AUM53191.1\|989905_990385_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
CP019202.1\|AUM53180.1\|979458_980205_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	6.534e-48
CP019202.1\|AUM53188.1\|988318_988675_+\|hypothetical-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	2.71627e-48
CP019202.1\|AUM53178.1\|977815_978376_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
CP019202.1\|AUM53183.1\|981753_982047_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
CP019202.1\|AUM53177.1\|976262_977819_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP019202.1\|AUM53175.1\|972190_973144_-\|pathogenicity-island-1-effector-protein-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP019202.1\|AUM53187.1\|987695_988301_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	3.2499e-145
CP019202.1\|AUM53184.1\|984054_985101_-\|Zn-dependent-exopeptidase-M28	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP019202.1\|AUM53189.1\|988865_989177_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
CP019202.1\|AUM53186.1\|986269_987709_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP019202.1\|AUM53176.1\|973587_976251_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
CP019202.1\|AUM53174.1\|971243_971978_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.73232e-139
CP019202.1\|AUM53190.1\|989195_989906_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
CP019202.1\|AUM53192.1\|990381_991431_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP019202.1\|AUM53179.1\|978389_979448_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.4012e-132

>CP019202.1|AUM53183.1|981753_982047_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>CP019202.1|AUM53182.1|980833_981754_+|subtype-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLINKTGVRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIKPPQPAPDMLPPAIPEPESLGDSGHRGHG
>CP019202.1|AUM53181.1|980186_980837_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRREKSRQMIQFSSVDYTGVLVINDPVLFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>CP019202.1|AUM53180.1|979458_980205_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLEGSAADVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQEPWLRKEDACISQE
>CP019202.1|AUM53179.1|978389_979448_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>CP019202.1|AUM53178.1|977815_978376_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>CP019202.1|AUM53177.1|976262_977819_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAEMPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>CP019202.1|AUM53176.1|973587_976251_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>CP019202.1|AUM53175.1|972190_973144_-|pathogenicity-island-1-effector-protein-SopD
MPVTLSFGNHQNYMLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNIEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP019202.1|AUM53174.1|971243_971978_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP019202.1|AUM53184.1|984054_985101_-|Zn-dependent-exopeptidase-M28
MFSATRRFAVILALGVGFILPAQASSPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP019202.1|AUM53185.1|985351_986260_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP019202.1|AUM53186.1|986269_987709_+|sulfate-adenylyltransferase
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYCEETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLVPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPLVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP019202.1|AUM53187.1|987695_988301_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHHRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>CP019202.1|AUM53188.1|988318_988675_+|hypothetical-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVNDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>CP019202.1|AUM53189.1|988865_989177_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP019202.1|AUM53190.1|989195_989906_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP019202.1|AUM53191.1|989905_990385_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP019202.1|AUM53192.1|990381_991431_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP019202.1|AUM53193.1|991411_992173_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNILYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP019202_1	1.13\|965008\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	965008-965039	32	NZ_CP039495	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence	16537-16568	0	1.0
CP019202_1	1.13\|965008\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	965008-965039	32	KC139516	Salmonella phage FSL SP-016, partial genome	44540-44571	0	1.0
CP019202_1	1.13\|965008\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	965008-965039	32	NC_042346	Salmonella virus BTP1 genome assembly, chromosome: BTP1	23602-23633	0	1.0
CP019202_1	1.13\|965008\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	965008-965039	32	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	45442-45473	1	0.969
CP019202_1	1.13\|965008\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	965008-965039	32	CP051275	Salmonella phage SW-37, complete genome	22992-23023	1	0.969
CP019202_2	2.23\|983513\|32\|CP019202\|CRISPRCasFinder,CRT	983513-983544	32	CP053410	Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence	44895-44926	3	0.906
CP019202_1	1.17\|965252\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	965252-965283	32	NZ_LN554848	Aliivibrio wodanis genome assembly AWOD1, plasmid : pAWOD920	55242-55273	5	0.844
CP019202_2	2.11\|982784\|32\|CP019202\|CRISPRCasFinder,CRT	982784-982815	32	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	178636-178667	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_KT307967	Yersinia pseudotuberculosis strain IP2666 plasmid pYV2666, complete sequence	3657-3688	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NC_010157	Yersinia pestis Angola plasmid new_pCD, complete sequence	52733-52764	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NC_006153	Yersinia pseudotuberculosis IP 32953 plasmid pYV, complete sequence	3655-3686	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NC_005813	Yersinia pestis biovar Microtus str. 91001 plasmid pCD1, complete sequence	5726-5757	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP009491	Yersinia pestis strain PBM19 plasmid pCD1, complete sequence	22794-22825	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NC_010635	Yersinia pseudotuberculosis PB1/+ plasmid pYPTS01, complete sequence	18045-18076	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP009758	Yersinia pseudotuberculosis strain EP2/+ plasmid pCD, complete sequence	29230-29261	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP009779	Yersinia pseudotuberculosis PB1/+ plasmid pYAB, complete sequence	30995-31026	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP009711	Yersinia pseudotuberculosis IP 32953 strain IP32953 plasmid pYAC_1, complete sequence	33462-33493	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP009713	Yersinia pestis Pestoides F plasmid pCD, complete sequence	8420-8451	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP009703	Yersinia pestis strain Harbin35 plasmid unnamed2, complete sequence	53711-53742	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP009783	Yersinia pestis strain El Dorado plasmid pCD, complete sequence	41473-41504	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP009721	Yersinia pestis strain Shasta plasmid pCD, complete sequence	15954-15985	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP045260	Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pCD, complete sequence	2016-2047	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP033695	Yersinia pestis strain FDAARGOS_602 plasmid unnamed2, complete sequence	32080-32111	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NC_009377	Yersinia pestis Pestoides F plasmid CD, complete sequence	3737-3768	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NC_014017	Yersinia pestis Z176003 plasmid pCD1, complete sequence	53160-53191	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NC_017263	Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pCD, complete sequence	53373-53404	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP033697	Yersinia pestis strain FDAARGOS_601 plasmid unnamed1, complete sequence	67337-67368	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP033712	Yersinia pseudotuberculosis strain FDAARGOS_581 plasmid unnamed, complete sequence	52835-52866	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP033714	Yersinia pseudotuberculosis strain FDAARGOS_580 plasmid unnamed, complete sequence	1810-1841	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP032567	Yersinia pseudotuberculosis strain IP2666pIB1 plasmid pIB1, complete sequence	3657-3688	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP033708	Yersinia pseudotuberculosis strain FDAARGOS_583 plasmid unnamed, complete sequence	8879-8910	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP045147	Yersinia pestis strain SCPM-O-B-6899 (231) plasmid pCD, complete sequence	2016-2047	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP045156	Yersinia pestis strain SCPM-O-B-5935 (I-1996) plasmid pCD, complete sequence	2016-2047	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP045160	Yersinia pestis subsp. pestis bv. Medievalis strain SCPM-O-B-6530 plasmid pCD, complete sequence	2016-2047	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP006747	Yersinia pestis 8787 plasmid pCD1, complete sequence	29547-29578	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP009972	Yersinia pestis CO92 plasmid unnamed, complete sequence	21695-21726	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NC_003131	Yersinia pestis CO92 plasmid pCD1, complete sequence	55118-55149	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP045151	Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pCD, complete sequence	2016-2047	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP006791	Yersinia pestis 2944 plasmid pCD, complete sequence	25332-25363	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP006750	Yersinia pestis 3770 plasmid pCD1, complete sequence	63914-63945	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP006757	Yersinia pestis 1522 plasmid pCD, complete sequence	16846-16877	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_LT596222	Yersinia pseudotuberculosis isolate NZYP4713 plasmid 2	2004-2035	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP033710	Yersinia pseudotuberculosis strain FDAARGOS_582 plasmid unnamed, complete sequence	41051-41082	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NC_017157	Yersinia pestis D182038 plasmid pCD1, complete sequence	54483-54514	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NC_017153	Yersinia pestis D106004 plasmid pCD1, complete sequence	53160-53191	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP033716	Yersinia pseudotuberculosis strain FDAARGOS_579 plasmid unnamed, complete sequence	33032-33063	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NC_004839	Yersinia pestis strain KIM5 plasmid pCD1, complete sequence	3737-3768	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP033689	Yersinia pestis strain FDAARGOS_603 plasmid unnamed1, complete sequence	36155-36186	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP006761	Yersinia pestis 1413 plasmid pCD, complete sequence	34564-34595	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP006780	Yersinia pestis 1412 plasmid pCD, complete sequence	17614-17645	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP006753	Yersinia pestis 3067 plasmid pCD1, complete sequence	17769-17800	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP016274	Yersinia pestis strain Cadman plasmid pCD1, complete sequence	26932-26963	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP019710	Yersinia pestis strain 195/P plasmid pCD1, complete sequence	9952-9983	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP009905	Yersinia pestis Antiqua plasmid pCD, complete sequence	21643-21674	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP009990	Yersinia pestis strain Nicholisk 41 plasmid 2, complete sequence	51092-51123	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP009937	Yersinia pestis Angola plasmid pCD, complete sequence	11000-11031	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP009842	Yersinia pestis strain Dodson plasmid pCD, complete sequence	61073-61104	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP010069	Yersinia pseudotuberculosis str. PA3606 plasmid unnamed1, complete sequence	58463-58494	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP010246	Yersinia pestis Pestoides G plasmid pCD, complete sequence	47330-47361	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP010022	Yersinia pestis str. Pestoides B plasmid pCD, complete sequence	28027-28058	6	0.812
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NC_015056	Yersinia pestis Java 9 plasmid pCD, complete sequence	76315-76346	6	0.812
CP019202_2	2.20\|983333\|29\|CP019202\|CRISPRCasFinder,CRT	983333-983361	29	NZ_CP010957	Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence	225651-225679	6	0.793
CP019202_2	2.20\|983333\|29\|CP019202\|CRISPRCasFinder,CRT	983333-983361	29	AP013537	Uncultured Mediterranean phage uvMED DNA, complete genome, group G6, isolate: uvMED-CGR-C59A-MedDCM-OCT-S34-C49	24370-24398	6	0.793
CP019202_2	2.20\|983333\|29\|CP019202\|CRISPRCasFinder,CRT	983333-983361	29	AP014007	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C59A-MedDCM-OCT-S29-C45, * SEQUENCING IN PROGRESS *	26235-26263	6	0.793
CP019202_2	2.29\|983919\|32\|CP019202\|CRISPRCasFinder	983919-983950	32	NZ_CP033726	Clavibacter michiganensis subsp. michiganensis strain UF1 plasmid pCM2U-F1, complete sequence	43935-43966	6	0.812
CP019202_3	3.1\|1950258\|31\|CP019202\|CRISPRCasFinder	1950258-1950288	31	KY271396	Klebsiella phage 2 LV-2017, complete genome	33331-33361	6	0.806
CP019202_3	3.1\|1950258\|31\|CP019202\|CRISPRCasFinder	1950258-1950288	31	MN098327	Klebsiella phage Mulock, complete genome	34231-34261	6	0.806
CP019202_3	3.1\|1950258\|31\|CP019202\|CRISPRCasFinder	1950258-1950288	31	KY271395	Klebsiella phage 2b LV-2017, complete genome	11682-11712	6	0.806
CP019202_3	3.1\|1950258\|31\|CP019202\|CRISPRCasFinder	1950258-1950288	31	MK448230	Klebsiella phage ST16-OXA48phi5.2, complete genome	13189-13219	6	0.806
CP019202_1	1.8\|964703\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964703-964734	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3403299-3403330	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_CP044974	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B4) plasmid pPBL-H3_B4-2, complete sequence	75250-75281	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_CP053984	Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence	8273-8304	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_CP015373	Pandoraea pnomenusa strain MCB032 plasmid unnamed 2, complete sequence	23025-23056	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_CP026268	Aminobacter sp. MSH1 plasmid pBAM1, complete sequence	23153-23184	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NC_010935	Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence	9729-9760	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NC_017908	Mycobacterium abscessus subsp. bolletii F1725 plasmid BRA100, complete sequence	41202-41233	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	549233-549264	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	JX469834	Uncultured bacterium plasmid pDS3, complete sequence	38822-38853	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	JX469828	Uncultured bacterium plasmid pRSB223, complete sequence	6551-6582	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	JX469831	Uncultured bacterium plasmid pKSP212, complete sequence	45664-45695	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_CP044977	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-2, complete sequence	77800-77831	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	JN106171	Uncultured bacterium plasmid pAKD26, complete sequence	71417-71448	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	JN106172	Uncultured bacterium plasmid pAKD29, complete sequence	38666-38697	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	JN106173	Uncultured bacterium plasmid pAKD31, complete sequence	39847-39878	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	JN106174	Uncultured bacterium plasmid pAKD33, complete sequence	39847-39878	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	JN106165	Uncultured bacterium plasmid pAKD14, complete sequence	39844-39875	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	JN106166	Uncultured bacterium plasmid pAKD15, complete sequence	39844-39875	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	JN106168	Uncultured bacterium plasmid pAKD17, complete sequence	39844-39875	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	JN106169	Uncultured bacterium plasmid pAKD18, complete sequence	39829-39860	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_CP044551	Hydrogenophaga sp. BPS33 plasmid pBPS33-2, complete sequence	62497-62528	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NC_016968	Comamonas testosteroni plasmid pTB30, complete sequence	76964-76995	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NC_016978	Comamonas testosteroni plasmid pI2, complete sequence	66272-66303	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_CP017760	Cupriavidus necator strain NH9 plasmid pENH91, complete sequence	20743-20774	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_CP053554	Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence	19175-19206	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	KF743817	Proteus mirabilis plasmid R772, complete sequence	38759-38790	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	KF743818	Bordetella bronchiseptica plasmid R906, complete sequence	40977-41008	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_CP038640	Cupriavidus oxalaticus strain X32 plasmid unnamed5, complete sequence	74199-74230	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NC_019263	Delftia acidovorans plasmid pLME1, complete sequence	75102-75133	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NC_019264	Delftia acidovorans plasmid pNB8c, complete sequence	58096-58127	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NC_019283	Delftia acidovorans plasmid pC1-1, complete sequence	71953-71984	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NC_019320	Variovorax sp. DB1 plasmid pDB1, complete sequence	8004-8035	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_LR594664	Variovorax sp. RA8 plasmid 3	307956-307987	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NC_021077	Comamonas sp. 7D-2 plasmid pBHB, complete sequence	80572-80603	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NC_007337	Cupriavidus pinatubonensis JMP134 plasmid 1, complete sequence	8004-8035	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_LR594677	Variovorax sp. PBS-H4 plasmid 3	91682-91713	7	0.781
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NC_006830	Achromobacter xylosoxidans A8 plasmid pA81, complete sequence	78675-78706	7	0.781
CP019202_1	1.24\|965680\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	965680-965711	32	NZ_CP014690	Gluconobacter albidus strain TMW2.1191 plasmid pGS1191_1, complete sequence	221609-221640	7	0.781
CP019202_1	1.26\|965802\|32\|CP019202\|CRISPRCasFinder,CRT	965802-965833	32	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	4747-4778	7	0.781
CP019202_1	1.26\|965802\|32\|CP019202\|CRISPRCasFinder,CRT	965802-965833	32	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	389262-389293	7	0.781
CP019202_1	1.26\|965802\|32\|CP019202\|CRISPRCasFinder,CRT	965802-965833	32	AP014010	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, * SEQUENCING IN PROGRESS *	33568-33599	7	0.781
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	834462-834493	7	0.781
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	652620-652651	7	0.781
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	666481-666512	7	0.781
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	591710-591741	7	0.781
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP021819	Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence	492570-492601	7	0.781
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	1326784-1326815	7	0.781
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	235632-235663	7	0.781
CP019202_3	3.1\|1950258\|31\|CP019202\|CRISPRCasFinder	1950258-1950288	31	NC_008771	Verminephrobacter eiseniae EF01-2 plasmid pVEIS01, complete sequence	26884-26914	7	0.774
CP019202_3	3.1\|1950258\|31\|CP019202\|CRISPRCasFinder	1950258-1950288	31	NZ_CP047230	Moraxella osloensis strain YV1 plasmid p4, complete sequence	5720-5750	7	0.774
CP019202_3	3.1\|1950258\|31\|CP019202\|CRISPRCasFinder	1950258-1950288	31	NZ_CP011866	Enterobacter asburiae strain ATCC 35953 plasmid unnamed 3, complete sequence	4507-4537	7	0.774
CP019202_3	3.1\|1950258\|31\|CP019202\|CRISPRCasFinder	1950258-1950288	31	NZ_CP011866	Enterobacter asburiae strain ATCC 35953 plasmid unnamed 3, complete sequence	9665-9695	7	0.774
CP019202_3	3.1\|1950258\|31\|CP019202\|CRISPRCasFinder	1950258-1950288	31	NZ_CP011866	Enterobacter asburiae strain ATCC 35953 plasmid unnamed 3, complete sequence	14816-14846	7	0.774
CP019202_3	3.1\|1950258\|31\|CP019202\|CRISPRCasFinder	1950258-1950288	31	NC_019298	Rahnella sp. WMR121 plasmid pHW121, complete sequence	1909-1939	7	0.774
CP019202_3	3.1\|1950258\|31\|CP019202\|CRISPRCasFinder	1950258-1950288	31	NZ_KX364409	Aeromonas salmonicida subsp. salmonicida strain M16474-11 plasmid pAsa8, complete sequence	44287-44317	7	0.774
CP019202_3	3.1\|1950258\|31\|CP019202\|CRISPRCasFinder	1950258-1950288	31	NC_012209	Yersinia enterocolitica plasmid pYe4449-2, complete sequence	14303-14333	7	0.774
CP019202_1	1.5\|964520\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964520-964551	32	NZ_CP028919	Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence	34712-34743	8	0.75
CP019202_1	1.8\|964703\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964703-964734	32	NZ_LT984809	Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence	272071-272102	8	0.75
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_CP040989	Vibrio furnissii strain FDAARGOS_777 plasmid unnamed1, complete sequence	23089-23120	8	0.75
CP019202_1	1.11\|964886\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964886-964917	32	NZ_CP035511	Haematobacter massiliensis strain OT1 plasmid pOT1-1, complete sequence	188876-188907	8	0.75
CP019202_1	1.15\|965130\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	965130-965161	32	NZ_CP042333	Bosea sp. F3-2 plasmid pB32-2, complete sequence	28489-28520	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP024200	Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence	508622-508653	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	938103-938134	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	1142696-1142727	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	1515253-1515284	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	544308-544339	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	1138201-1138232	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	1084795-1084826	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	1048974-1049005	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	1239699-1239730	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	1224396-1224427	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	808919-808950	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	771861-771892	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	936442-936473	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	840415-840446	8	0.75
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	KC292024	Halovirus HHTV-2, complete genome	51651-51682	8	0.75
CP019202_2	2.25\|983635\|32\|CP019202\|CRISPRCasFinder,CRT	983635-983666	32	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	411938-411969	8	0.75
CP019202_2	2.29\|983919\|32\|CP019202\|CRISPRCasFinder	983919-983950	32	NZ_CP015231	Epibacterium mobile F1926 plasmid unnamed1, complete sequence	463868-463899	8	0.75
CP019202_2	2.29\|983919\|32\|CP019202\|CRISPRCasFinder	983919-983950	32	NC_021304	Streptomyces phage Sujidade, complete genome	1599-1630	8	0.75
CP019202_2	2.29\|983919\|32\|CP019202\|CRISPRCasFinder	983919-983950	32	MG663585	Streptomyces phage ToriToki, complete genome	15079-15110	8	0.75
CP019202_2	2.29\|983919\|32\|CP019202\|CRISPRCasFinder	983919-983950	32	MK112550	Streptomyces phage Olicious, complete genome	15086-15117	8	0.75
CP019202_2	2.29\|983919\|32\|CP019202\|CRISPRCasFinder	983919-983950	32	MG663582	Streptomyces phage HaugeAnator, complete genome	15086-15117	8	0.75
CP019202_2	2.29\|983919\|32\|CP019202\|CRISPRCasFinder	983919-983950	32	MG663586	Streptomyces phage ZooBear, complete genome	15086-15117	8	0.75
CP019202_2	2.29\|983919\|32\|CP019202\|CRISPRCasFinder	983919-983950	32	NC_048686	Streptomyces phage Immanuel3, complete genome	15090-15121	8	0.75
CP019202_2	2.29\|983919\|32\|CP019202\|CRISPRCasFinder	983919-983950	32	MG663584	Streptomyces phage Romero, complete genome	15079-15110	8	0.75
CP019202_1	1.1\|964275\|33\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964275-964307	33	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	991009-991041	9	0.727
CP019202_1	1.5\|964520\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964520-964551	32	NC_049851	Burkholderia phage BcepSauron, complete genome	40328-40359	9	0.719
CP019202_1	1.5\|964520\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964520-964551	32	NC_049850	Burkholderia phage BcepSaruman, complete genome	39621-39652	9	0.719
CP019202_1	1.10\|964825\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964825-964856	32	NZ_CP044073	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence	88620-88651	9	0.719
CP019202_1	1.11\|964886\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964886-964917	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	760675-760706	9	0.719
CP019202_1	1.18\|965313\|33\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	965313-965345	33	NZ_CP030128	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed2, complete sequence	337150-337182	9	0.727
CP019202_2	2.6\|982479\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	982479-982510	32	NZ_CP025882	Escherichia coli strain 503440 plasmid p503440_52, complete sequence	21245-21276	9	0.719
CP019202_2	2.6\|982479\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	982479-982510	32	NZ_CP025895	Escherichia coli strain 503025 plasmid p503025_52, complete sequence	49736-49767	9	0.719
CP019202_2	2.6\|982479\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	982479-982510	32	NZ_CP025867	Escherichia coli strain 504211 plasmid p504211_50, complete sequence	49975-50006	9	0.719
CP019202_2	2.6\|982479\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	982479-982510	32	NZ_CP025980	Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence	137273-137304	9	0.719
CP019202_2	2.6\|982479\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	982479-982510	32	NZ_CP025871	Escherichia coli strain 503829 plasmid p503829_52, complete sequence	8728-8759	9	0.719
CP019202_2	2.6\|982479\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	982479-982510	32	NZ_CP054369	Escherichia coli strain SCU-115 plasmid pSCU-115-1, complete sequence	142880-142911	9	0.719
CP019202_2	2.6\|982479\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	982479-982510	32	NZ_CP006000	Escherichia coli B7A plasmid pEB2, complete sequence	28176-28207	9	0.719
CP019202_2	2.6\|982479\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	982479-982510	32	NZ_CP012377	Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence	101019-101050	9	0.719
CP019202_2	2.6\|982479\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	982479-982510	32	NZ_CP050647	Escherichia coli strain PapM-36-2 plasmid pIncFIB, complete sequence	101888-101919	9	0.719
CP019202_2	2.6\|982479\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	982479-982510	32	CP025897	Escherichia coli strain 500465 plasmid p500465_152, complete sequence	63594-63625	9	0.719
CP019202_2	2.6\|982479\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	982479-982510	32	NZ_CP010126	Escherichia coli strain C8 plasmid A, complete genome	65388-65419	9	0.719
CP019202_2	2.6\|982479\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	982479-982510	32	NZ_CP031323	Escherichia coli strain ST2350 isolate Es_ST2350_SE1_NDM_03_2018 plasmid pEsST2350_SE_2, complete sequence	27432-27463	9	0.719
CP019202_2	2.9\|982662\|32\|CP019202\|CRISPRCasFinder,CRT	982662-982693	32	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	436590-436621	9	0.719
CP019202_2	2.9\|982662\|32\|CP019202\|CRISPRCasFinder,CRT	982662-982693	32	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	610630-610661	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	NZ_CP009975	Pseudomonas putida S12 plasmid pTTS12, complete sequence	84729-84760	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	NZ_CP039989	Pseudomonas aeruginosa strain T2436 plasmid pBT2436, complete sequence	145047-145078	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	NZ_CP039991	Pseudomonas aeruginosa strain T2101 plasmid pBT2101, complete sequence	145256-145287	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	NZ_CP045917	Pseudomonas aeruginosa strain CF39S plasmid pCF39S, complete sequence	148548-148579	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	MF344571	Pseudomonas aeruginosa plasmid pR31014-IMP, complete sequence	148330-148361	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	MF344568	Pseudomonas aeruginosa plasmid p727-IMP, complete sequence	151010-151041	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	MF344569	Pseudomonas aeruginosa plasmid p12939-PER, complete sequence	147600-147631	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	MF344570	Pseudomonas aeruginosa plasmid pA681-IMP, complete sequence	150756-150787	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	NZ_CP039294	Pseudomonas aeruginosa strain PABL048 plasmid pPABL048, complete sequence	392902-392933	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	CP027478	Pseudomonas koreensis strain P19E3 plasmid p1, complete sequence	223040-223071	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	NZ_CP040126	Pseudomonas aeruginosa strain PA298 plasmid pBM908, complete sequence	84333-84364	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	NZ_CP015879	Pseudomonas citronellolis strain SJTE-3 plasmid pRBL16, complete sequence	78216-78247	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	NZ_CP016215	Pseudomonas aeruginosa strain PA121617 plasmid pBM413, complete sequence	156756-156787	9	0.719
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	NZ_KY883660	Pseudomonas putida strain SY153 plasmid pSY153-MDR, complete sequence	154605-154636	9	0.719
CP019202_2	2.12\|982845\|32\|CP019202\|CRISPRCasFinder,CRT	982845-982876	32	NZ_CP047261	Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence	86590-86621	9	0.719
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP044424	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN1, complete sequence	48814-48845	9	0.719
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	KT381276	Mycobacterium phage Serenity, complete genome	13746-13777	9	0.719
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	77981-78012	9	0.719
CP019202_2	2.18\|983211\|32\|CP019202\|CRISPRCasFinder,CRT	983211-983242	32	AP014927	Ralstonia phage RSF1 DNA, complete genome	117193-117224	9	0.719
CP019202_2	2.22\|983452\|32\|CP019202\|CRISPRCasFinder,CRT	983452-983483	32	LR877331	Klebsiella phage vB_KpnM_311F genome assembly, chromosome: 1	58865-58896	9	0.719
CP019202_2	2.22\|983452\|32\|CP019202\|CRISPRCasFinder,CRT	983452-983483	32	MN434095	Klebsiella pneumoniae phage JIPh_Kp122, complete genome	157694-157725	9	0.719
CP019202_2	2.22\|983452\|32\|CP019202\|CRISPRCasFinder,CRT	983452-983483	32	KY000080	Klebsiella phage KPV15, complete genome	11451-11482	9	0.719
CP019202_2	2.22\|983452\|32\|CP019202\|CRISPRCasFinder,CRT	983452-983483	32	NC_028686	Klebsiella phage JD18, complete genome	157483-157514	9	0.719
CP019202_2	2.22\|983452\|32\|CP019202\|CRISPRCasFinder,CRT	983452-983483	32	MK421971	Klebsiella phage vB_KpnM_GF, partial genome	152891-152922	9	0.719
CP019202_2	2.27\|983757\|32\|CP019202\|CRISPRCasFinder,CRT	983757-983788	32	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1282116-1282147	9	0.719
CP019202_2	2.27\|983757\|32\|CP019202\|CRISPRCasFinder,CRT	983757-983788	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	983836-983867	9	0.719
CP019202_2	2.27\|983757\|32\|CP019202\|CRISPRCasFinder,CRT	983757-983788	32	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1282272-1282303	9	0.719
CP019202_2	2.29\|983919\|32\|CP019202\|CRISPRCasFinder	983919-983950	32	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	341970-342001	9	0.719
CP019202_2	2.29\|983919\|32\|CP019202\|CRISPRCasFinder	983919-983950	32	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	321406-321437	9	0.719
CP019202_1	1.11\|964886\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964886-964917	32	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	102029-102060	10	0.688
CP019202_1	1.11\|964886\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964886-964917	32	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	251833-251864	10	0.688
CP019202_1	1.11\|964886\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964886-964917	32	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	286129-286160	10	0.688
CP019202_1	1.11\|964886\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	964886-964917	32	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	442068-442099	10	0.688
CP019202_1	1.21\|965497\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	965497-965528	32	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	613341-613372	10	0.688
CP019202_1	1.26\|965802\|32\|CP019202\|CRISPRCasFinder,CRT	965802-965833	32	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	78355-78386	10	0.688
CP019202_1	1.26\|965802\|32\|CP019202\|CRISPRCasFinder,CRT	965802-965833	32	NZ_CP053971	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence	72031-72062	10	0.688
CP019202_1	1.26\|965802\|32\|CP019202\|CRISPRCasFinder,CRT	965802-965833	32	NZ_CP013278	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence	3413-3444	10	0.688
CP019202_1	1.26\|965802\|32\|CP019202\|CRISPRCasFinder,CRT	965802-965833	32	NC_018509	Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence	232722-232753	10	0.688
CP019202_1	1.26\|965802\|32\|CP019202\|CRISPRCasFinder,CRT	965802-965833	32	NZ_CP039724	Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence	129890-129921	10	0.688
CP019202_1	1.26\|965802\|32\|CP019202\|CRISPRCasFinder,CRT	965802-965833	32	NZ_CP051859	Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence	109941-109972	10	0.688
CP019202_1	1.26\|965802\|32\|CP019202\|CRISPRCasFinder,CRT	965802-965833	32	NZ_CP009347	Bacillus thuringiensis HD1002 plasmid 3, complete sequence	148697-148728	10	0.688
CP019202_1	1.26\|965802\|32\|CP019202\|CRISPRCasFinder,CRT	965802-965833	32	NZ_CP045025	Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence	3413-3444	10	0.688
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	NZ_KY494864	Pseudomonas aeruginosa strain FFUP_PS_37 plasmid pJB37, complete sequence	91265-91296	10	0.688
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	NZ_LT969519	Pseudomonas aeruginosa isolate RW109 genome assembly, plasmid: RW109 plasmid 1	116070-116101	10	0.688
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	NZ_MN433457	Pseudomonas aeruginosa strain PAB546 plasmid pNK546-KPC, complete sequence	200841-200872	10	0.688
CP019202_2	2.10\|982723\|32\|CP019202\|CRISPRCasFinder,CRT	982723-982754	32	NZ_CP045003	Pseudomonas aeruginosa strain PAG5 plasmid pPAG5, complete sequence	478203-478234	10	0.688
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	MG962370	Mycobacterium phage Kykar, complete genome	13914-13945	10	0.688
CP019202_2	2.13\|982906\|32\|CP019202\|CRISPRCasFinder,CRT	982906-982937	32	MK359312	Mycobacterium phage Fushigi, complete genome	14740-14771	10	0.688
CP019202_2	2.14\|982967\|32\|CP019202\|CRISPRCasFinder,CRT	982967-982998	32	NZ_CP019603	Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence	84615-84646	10	0.688
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP018080	Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence	170081-170112	10	0.688
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP020568	Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence	149487-149518	10	0.688
CP019202_2	2.16\|983089\|32\|CP019202\|CRISPRCasFinder,CRT	983089-983120	32	MH727593	Acidovorax phage ACPWH, complete genome	37920-37951	10	0.688
CP019202_2	2.29\|983919\|32\|CP019202\|CRISPRCasFinder	983919-983950	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	774630-774661	10	0.688
CP019202_2	2.30\|983980\|32\|CP019202\|CRISPRCasFinder	983980-984011	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
CP019202_2	2.30\|983980\|32\|CP019202\|CRISPRCasFinder	983980-984011	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
CP019202_1	1.13\|965008\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	965008-965039	32	NC_010683	Ralstonia pickettii 12J plasmid pRPIC01, complete sequence	22365-22396	11	0.656
CP019202_2	2.5\|982418\|32\|CP019202\|PILER-CR,CRISPRCasFinder,CRT	982418-982449	32	KU963249	Gordonia phage Yeezy, complete genome	46010-46041	11	0.656
CP019202_2	2.22\|983452\|32\|CP019202\|CRISPRCasFinder,CRT	983452-983483	32	MH729874	Klebsiella phage KP179, complete genome	150763-150794	11	0.656

1. spacer 1.13|965008|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039495 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence) position: , mismatch: 0, identity: 1.0

agaatattcaactccagcgggaaaaagacgca	CRISPR spacer
agaatattcaactccagcgggaaaaagacgca	Protospacer
********************************

2. spacer 1.13|965008|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 0, identity: 1.0

agaatattcaactccagcgggaaaaagacgca	CRISPR spacer
agaatattcaactccagcgggaaaaagacgca	Protospacer
********************************

3. spacer 1.13|965008|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_042346 (Salmonella virus BTP1 genome assembly, chromosome: BTP1) position: , mismatch: 0, identity: 1.0

agaatattcaactccagcgggaaaaagacgca	CRISPR spacer
agaatattcaactccagcgggaaaaagacgca	Protospacer
********************************

4. spacer 1.13|965008|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 1, identity: 0.969

agaatattcaactccagcgggaaaaagacgca	CRISPR spacer
agaatactcaactccagcgggaaaaagacgca	Protospacer
******.*************************

5. spacer 1.13|965008|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.969

agaatattcaactccagcgggaaaaagacgca	CRISPR spacer
agaatcttcaactccagcgggaaaaagacgca	Protospacer
***** **************************

6. spacer 2.23|983513|32|CP019202|CRISPRCasFinder,CRT matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.906

agattgcagaattatatttcacgctggcagca	CRISPR spacer
agcttgcagaattatatttcacactggcagcg	Protospacer
** *******************.********.

7. spacer 1.17|965252|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN554848 (Aliivibrio wodanis genome assembly AWOD1, plasmid : pAWOD920) position: , mismatch: 5, identity: 0.844

-ggatcatcaatgtgggaagttatcacaacgga	CRISPR spacer
gggattatt-atgtgggaagttattactacgga	Protospacer
 ****.**. **************.** *****

8. spacer 2.11|982784|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 6, identity: 0.812

-atacagtagcaaaataaaaaggccgcgtgagc	CRISPR spacer
caaatagc-gcaaagaaaaaaggccgcgtgagc	Protospacer
 * *.**. *****. *****************

9. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_KT307967 (Yersinia pseudotuberculosis strain IP2666 plasmid pYV2666, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

10. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NC_010157 (Yersinia pestis Angola plasmid new_pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

11. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NC_006153 (Yersinia pseudotuberculosis IP 32953 plasmid pYV, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

12. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NC_005813 (Yersinia pestis biovar Microtus str. 91001 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

13. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009491 (Yersinia pestis strain PBM19 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

14. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NC_010635 (Yersinia pseudotuberculosis PB1/+ plasmid pYPTS01, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

15. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009758 (Yersinia pseudotuberculosis strain EP2/+ plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

16. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009779 (Yersinia pseudotuberculosis PB1/+ plasmid pYAB, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

17. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009711 (Yersinia pseudotuberculosis IP 32953 strain IP32953 plasmid pYAC_1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

18. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009713 (Yersinia pestis Pestoides F plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

19. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009703 (Yersinia pestis strain Harbin35 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

20. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009783 (Yersinia pestis strain El Dorado plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

21. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009721 (Yersinia pestis strain Shasta plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

22. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP045260 (Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

23. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP033695 (Yersinia pestis strain FDAARGOS_602 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

24. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NC_009377 (Yersinia pestis Pestoides F plasmid CD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

25. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NC_014017 (Yersinia pestis Z176003 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

26. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NC_017263 (Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

27. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP033697 (Yersinia pestis strain FDAARGOS_601 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

28. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP033712 (Yersinia pseudotuberculosis strain FDAARGOS_581 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

29. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP033714 (Yersinia pseudotuberculosis strain FDAARGOS_580 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

30. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP032567 (Yersinia pseudotuberculosis strain IP2666pIB1 plasmid pIB1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

31. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP033708 (Yersinia pseudotuberculosis strain FDAARGOS_583 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

32. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP045147 (Yersinia pestis strain SCPM-O-B-6899 (231) plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

33. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP045156 (Yersinia pestis strain SCPM-O-B-5935 (I-1996) plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

34. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP045160 (Yersinia pestis subsp. pestis bv. Medievalis strain SCPM-O-B-6530 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

35. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP006747 (Yersinia pestis 8787 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

36. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009972 (Yersinia pestis CO92 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

37. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NC_003131 (Yersinia pestis CO92 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

38. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP045151 (Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

39. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP006791 (Yersinia pestis 2944 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

40. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP006750 (Yersinia pestis 3770 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

41. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP006757 (Yersinia pestis 1522 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

42. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_LT596222 (Yersinia pseudotuberculosis isolate NZYP4713 plasmid 2) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

43. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP033710 (Yersinia pseudotuberculosis strain FDAARGOS_582 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

44. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NC_017157 (Yersinia pestis D182038 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

45. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NC_017153 (Yersinia pestis D106004 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

46. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP033716 (Yersinia pseudotuberculosis strain FDAARGOS_579 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

47. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NC_004839 (Yersinia pestis strain KIM5 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

48. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP033689 (Yersinia pestis strain FDAARGOS_603 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

49. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP006761 (Yersinia pestis 1413 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

50. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP006780 (Yersinia pestis 1412 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

51. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP006753 (Yersinia pestis 3067 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

52. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP016274 (Yersinia pestis strain Cadman plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

53. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP019710 (Yersinia pestis strain 195/P plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

54. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009905 (Yersinia pestis Antiqua plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

55. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009990 (Yersinia pestis strain Nicholisk 41 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

56. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009937 (Yersinia pestis Angola plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

57. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009842 (Yersinia pestis strain Dodson plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

58. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP010069 (Yersinia pseudotuberculosis str. PA3606 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

59. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP010246 (Yersinia pestis Pestoides G plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

60. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP010022 (Yersinia pestis str. Pestoides B plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

61. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NC_015056 (Yersinia pestis Java 9 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

62. spacer 2.20|983333|29|CP019202|CRISPRCasFinder,CRT matches to NZ_CP010957 (Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence) position: , mismatch: 6, identity: 0.793

cttgttaaatacaggcggcggcggggttg	CRISPR spacer
cgagagaaatacaggcgacggcgcggttg	Protospacer
*  *  ***********.***** *****

63. spacer 2.20|983333|29|CP019202|CRISPRCasFinder,CRT matches to AP013537 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G6, isolate: uvMED-CGR-C59A-MedDCM-OCT-S34-C49) position: , mismatch: 6, identity: 0.793

cttgttaaatacaggcggcggcggggttg	CRISPR spacer
catcgcaaatacaggcggcggcggtggtg	Protospacer
* *  .****************** * **

64. spacer 2.20|983333|29|CP019202|CRISPRCasFinder,CRT matches to AP014007 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C59A-MedDCM-OCT-S29-C45, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.793

cttgttaaatacaggcggcggcggggttg	CRISPR spacer
catcgcaaatacaggcggcggcggtggtg	Protospacer
* *  .****************** * **

65. spacer 2.29|983919|32|CP019202|CRISPRCasFinder matches to NZ_CP033726 (Clavibacter michiganensis subsp. michiganensis strain UF1 plasmid pCM2U-F1, complete sequence) position: , mismatch: 6, identity: 0.812

--tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agtcg--ggccgcgttcttgacctggctgtcggt	Protospacer
  ***  **. ****** * **************

66. spacer 3.1|1950258|31|CP019202|CRISPRCasFinder matches to KY271396 (Klebsiella phage 2 LV-2017, complete genome) position: , mismatch: 6, identity: 0.806

acaaacccagcaatggcgcggctttgaagca	CRISPR spacer
gcgagcccagcaatggcgcgggtttgaaggt	Protospacer
.*.*.**************** *******

67. spacer 3.1|1950258|31|CP019202|CRISPRCasFinder matches to MN098327 (Klebsiella phage Mulock, complete genome) position: , mismatch: 6, identity: 0.806

acaaacccagcaatggcgcggctttgaagca	CRISPR spacer
gcgagcccagcaatggcgcgggtttgaaggt	Protospacer
.*.*.**************** *******

68. spacer 3.1|1950258|31|CP019202|CRISPRCasFinder matches to KY271395 (Klebsiella phage 2b LV-2017, complete genome) position: , mismatch: 6, identity: 0.806

acaaacccagcaatggcgcggctttgaagca	CRISPR spacer
gcgagcccagcaatggcgcgggtttgaaggt	Protospacer
.*.*.**************** *******

69. spacer 3.1|1950258|31|CP019202|CRISPRCasFinder matches to MK448230 (Klebsiella phage ST16-OXA48phi5.2, complete genome) position: , mismatch: 6, identity: 0.806

acaaacccagcaatggcgcggctttgaagca	CRISPR spacer
acgagtccagcaatggcgcgggtttgaaggt	Protospacer
**.*..*************** *******

70. spacer 1.8|964703|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

gctcccgcg-----ggcgctcctgttggccagcatca	CRISPR spacer
-----cgcgaccgtggcgatcctgctggccagcatca	Protospacer
     ****     **** *****.************

71. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044974 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B4) plasmid pPBL-H3_B4-2, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

72. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053984 (Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

73. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015373 (Pandoraea pnomenusa strain MCB032 plasmid unnamed 2, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

74. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026268 (Aminobacter sp. MSH1 plasmid pBAM1, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

75. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_010935 (Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

76. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_017908 (Mycobacterium abscessus subsp. bolletii F1725 plasmid BRA100, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

77. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

78. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to JX469834 (Uncultured bacterium plasmid pDS3, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

79. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to JX469828 (Uncultured bacterium plasmid pRSB223, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

80. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to JX469831 (Uncultured bacterium plasmid pKSP212, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

81. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044977 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-2, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

82. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to JN106171 (Uncultured bacterium plasmid pAKD26, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

83. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to JN106172 (Uncultured bacterium plasmid pAKD29, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

84. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to JN106173 (Uncultured bacterium plasmid pAKD31, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

85. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to JN106174 (Uncultured bacterium plasmid pAKD33, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

86. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to JN106165 (Uncultured bacterium plasmid pAKD14, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

87. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to JN106166 (Uncultured bacterium plasmid pAKD15, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

88. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to JN106168 (Uncultured bacterium plasmid pAKD17, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

89. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to JN106169 (Uncultured bacterium plasmid pAKD18, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

90. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044551 (Hydrogenophaga sp. BPS33 plasmid pBPS33-2, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

91. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_016968 (Comamonas testosteroni plasmid pTB30, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

92. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_016978 (Comamonas testosteroni plasmid pI2, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

93. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017760 (Cupriavidus necator strain NH9 plasmid pENH91, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

94. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053554 (Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

95. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to KF743817 (Proteus mirabilis plasmid R772, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

96. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to KF743818 (Bordetella bronchiseptica plasmid R906, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

97. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038640 (Cupriavidus oxalaticus strain X32 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

98. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_019263 (Delftia acidovorans plasmid pLME1, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

99. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_019264 (Delftia acidovorans plasmid pNB8c, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

100. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_019283 (Delftia acidovorans plasmid pC1-1, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

101. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_019320 (Variovorax sp. DB1 plasmid pDB1, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

102. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594664 (Variovorax sp. RA8 plasmid 3) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

103. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_021077 (Comamonas sp. 7D-2 plasmid pBHB, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

104. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_007337 (Cupriavidus pinatubonensis JMP134 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

105. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594677 (Variovorax sp. PBS-H4 plasmid 3) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

106. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_006830 (Achromobacter xylosoxidans A8 plasmid pA81, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

107. spacer 1.24|965680|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014690 (Gluconobacter albidus strain TMW2.1191 plasmid pGS1191_1, complete sequence) position: , mismatch: 7, identity: 0.781

cgatatttatccagactgtcggacagggtggt	CRISPR spacer
cgctgcttatccagactgtccggcagggtcgg	Protospacer
** *..************** *.****** *

108. spacer 1.26|965802|32|CP019202|CRISPRCasFinder,CRT matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 7, identity: 0.781

agcac-aatcattattagatgaactttcatcaa	CRISPR spacer
-ttacgaaagatttttagatgaacttgcatcaa	Protospacer
  .** **  *** ************ ******

109. spacer 1.26|965802|32|CP019202|CRISPRCasFinder,CRT matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 7, identity: 0.781

agcac-aatcattattagatgaactttcatcaa	CRISPR spacer
-ttacgaaagatttttagatgaacttgcatcaa	Protospacer
  .** **  *** ************ ******

110. spacer 1.26|965802|32|CP019202|CRISPRCasFinder,CRT matches to AP014010 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

agcacaatcattattagatgaactt--tcatcaa	CRISPR spacer
aacacaagaattattagatgaacttggtgatg--	Protospacer
*.*****  ****************  * **

111. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

ctctattgccgggggtcgagatggccgcctgc	CRISPR spacer
ctgccttggcgggggtcgagatgaccgccgac	Protospacer
** . *** **************.***** .*

112. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 7, identity: 0.781

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
cagagctccgccagccgcaccggcgacggtgc	Protospacer
***..  * **************.*.******

113. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.781

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
cagagctccgccagccgcaccggcgacggtgc	Protospacer
***..  * **************.*.******

114. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.781

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
cagagctccgccagccgcaccggcgacggtgc	Protospacer
***..  * **************.*.******

115. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.781

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
cagagctccgccagccgcaccggcgacggtgc	Protospacer
***..  * **************.*.******

116. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.781

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
cagagctccgccagccgcaccggcgacggtgc	Protospacer
***..  * **************.*.******

117. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.781

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
cagagctccgccagccgcaccggcgacggtgc	Protospacer
***..  * **************.*.******

118. spacer 3.1|1950258|31|CP019202|CRISPRCasFinder matches to NC_008771 (Verminephrobacter eiseniae EF01-2 plasmid pVEIS01, complete sequence) position: , mismatch: 7, identity: 0.774

acaaacccagcaatggcgcggctttgaagca	CRISPR spacer
tgaaacccagcattggcgcggcttttcggcc	Protospacer
  ********** ************  .**

119. spacer 3.1|1950258|31|CP019202|CRISPRCasFinder matches to NZ_CP047230 (Moraxella osloensis strain YV1 plasmid p4, complete sequence) position: , mismatch: 7, identity: 0.774

acaaacccagcaatggcgcggctttgaagca	CRISPR spacer
cctagcccagtaatggcgcggctttgaactg	Protospacer
 * *.*****.***************** ..

120. spacer 3.1|1950258|31|CP019202|CRISPRCasFinder matches to NZ_CP011866 (Enterobacter asburiae strain ATCC 35953 plasmid unnamed 3, complete sequence) position: , mismatch: 7, identity: 0.774

acaaacccagcaatggcgcggctttgaagca	CRISPR spacer
agaaatccagcaatggcgcggcttgtagccc	Protospacer
* ***.******************  *. *

121. spacer 3.1|1950258|31|CP019202|CRISPRCasFinder matches to NZ_CP011866 (Enterobacter asburiae strain ATCC 35953 plasmid unnamed 3, complete sequence) position: , mismatch: 7, identity: 0.774

acaaacccagcaatggcgcggctttgaagca	CRISPR spacer
agaaatccagcaatggcgcggcttgtagccc	Protospacer
* ***.******************  *. *

122. spacer 3.1|1950258|31|CP019202|CRISPRCasFinder matches to NZ_CP011866 (Enterobacter asburiae strain ATCC 35953 plasmid unnamed 3, complete sequence) position: , mismatch: 7, identity: 0.774

acaaacccagcaatggcgcggctttgaagca	CRISPR spacer
agaaatccagcaatggcgcggcttgtagccc	Protospacer
* ***.******************  *. *

123. spacer 3.1|1950258|31|CP019202|CRISPRCasFinder matches to NC_019298 (Rahnella sp. WMR121 plasmid pHW121, complete sequence) position: , mismatch: 7, identity: 0.774

acaaacccagcaatggcgcggctttgaagca	CRISPR spacer
agaaatccagcaatggcgcggcttgtagccc	Protospacer
* ***.******************  *. *

124. spacer 3.1|1950258|31|CP019202|CRISPRCasFinder matches to NZ_KX364409 (Aeromonas salmonicida subsp. salmonicida strain M16474-11 plasmid pAsa8, complete sequence) position: , mismatch: 7, identity: 0.774

acaaacccagcaatggcgcggctttgaagca----	CRISPR spacer
gaaaacccagcaacggcgcggctt----gcatcgc	Protospacer
. ***********.**********    ***

125. spacer 3.1|1950258|31|CP019202|CRISPRCasFinder matches to NC_012209 (Yersinia enterocolitica plasmid pYe4449-2, complete sequence) position: , mismatch: 7, identity: 0.774

acaaacccagcaatggcgcggctttgaagca-	CRISPR spacer
acaaaaccagtaatggcgcggc-ttacggcgt	Protospacer
***** ****.*********** **. .**.

126. spacer 1.5|964520|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028919 (Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tccagcattgacgcgaaccctgcgccgctggc	CRISPR spacer
gccgaccttgccgcgatccctgcgccgctgcg	Protospacer
 **..* *** ***** *************

127. spacer 1.8|964703|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT984809 (Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence) position: , mismatch: 8, identity: 0.75

gctcccgcgggcgctcctgttggccagcatca	CRISPR spacer
gatgacgcgagcgctcttgttggccagcgcga	Protospacer
* *  ****.******.***********.. *

128. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040989 (Vibrio furnissii strain FDAARGOS_777 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctatgccaccgcctggacgttgaggtgattgc	Protospacer
* .  * ********** *********.***

129. spacer 1.11|964886|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035511 (Haematobacter massiliensis strain OT1 plasmid pOT1-1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgtggattgattctgatcgccgtgggcgggc	CRISPR spacer
gggcatggtgatgctgatcgacgtgggcgggc	Protospacer
* *.. . **** ******* ***********

130. spacer 1.15|965130|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042333 (Bosea sp. F3-2 plasmid pB32-2, complete sequence) position: , mismatch: 8, identity: 0.75

--ccggttttagctcgctggaaacctcgcttttg	CRISPR spacer
agcagggcc--gctcgctggaatcctcggttttg	Protospacer
  * ** ..  *********** ***** *****

131. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP024200 (Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
acggcccaggccagccgcgctggtggcggtgc	Protospacer
  **    **********.*.***********

132. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

133. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

134. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

135. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

136. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

137. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

138. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

139. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

140. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

141. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

142. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

143. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

144. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
caggcgaaggccagccgcaccggcccctgccc	Protospacer
**** ** ***************.  * *. *

145. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to KC292024 (Halovirus HHTV-2, complete genome) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
caggagacggccagcctctccgggtgggaggt	Protospacer
**************** * ****  * *. *.

146. spacer 2.25|983635|32|CP019202|CRISPRCasFinder,CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 8, identity: 0.75

cttggcagggctgcgccgcaatggcagcaaca	CRISPR spacer
ctgtgatgggctgcgccgcattggcggcaatg	Protospacer
**  *  ************* ****.****..

147. spacer 2.29|983919|32|CP019202|CRISPRCasFinder matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
gaaatggtggcgtttgtcacctggatgtccga	Protospacer
  . **********.********* **** *

148. spacer 2.29|983919|32|CP019202|CRISPRCasFinder matches to NC_021304 (Streptomyces phage Sujidade, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
gttcttctggcgttcgtcgcctggctgtccgt	Protospacer
 . .*  ***********.********** **

149. spacer 2.29|983919|32|CP019202|CRISPRCasFinder matches to MG663585 (Streptomyces phage ToriToki, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

150. spacer 2.29|983919|32|CP019202|CRISPRCasFinder matches to MK112550 (Streptomyces phage Olicious, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

151. spacer 2.29|983919|32|CP019202|CRISPRCasFinder matches to MG663582 (Streptomyces phage HaugeAnator, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

152. spacer 2.29|983919|32|CP019202|CRISPRCasFinder matches to MG663586 (Streptomyces phage ZooBear, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

153. spacer 2.29|983919|32|CP019202|CRISPRCasFinder matches to NC_048686 (Streptomyces phage Immanuel3, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

154. spacer 2.29|983919|32|CP019202|CRISPRCasFinder matches to MG663584 (Streptomyces phage Romero, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

155. spacer 1.1|964275|33|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 9, identity: 0.727

tcgtacaccagcgctttaccggagtgtccgtgc	CRISPR spacer
tcgaacaccggcgctttaccggaggtcatcggc	Protospacer
*** *****.**************  . .  **

156. spacer 1.5|964520|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_049851 (Burkholderia phage BcepSauron, complete genome) position: , mismatch: 9, identity: 0.719

tccagcattgacgcgaaccctgcgccgctggc	CRISPR spacer
tgctctgccgacgcgaacactgcgtcgctggc	Protospacer
* *  ....********* *****.*******

157. spacer 1.5|964520|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_049850 (Burkholderia phage BcepSaruman, complete genome) position: , mismatch: 9, identity: 0.719

tccagcattgacgcgaaccctgcgccgctggc	CRISPR spacer
tgctctgccgacgcgaacactgcgtcgctggc	Protospacer
* *  ....********* *****.*******

158. spacer 1.10|964825|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044073 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
gagatcgcccgcctggaggctgagcaagacga	Protospacer
 ****** ***********.****  .* .*.

159. spacer 1.11|964886|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

gcgtggattgattctgatcgccgtgggcgggc	CRISPR spacer
ggcccgcaagattccgatcgccgtgcgcgggc	Protospacer
*  . *   *****.********** ******

160. spacer 1.18|965313|33|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030128 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

cgaaattcagcgtctggaatgcaaggattttgt	CRISPR spacer
cgaaatacagcgtcgggaatgcaacagtacctt	Protospacer
****** ******* ********* ..* .. *

161. spacer 2.6|982479|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025882 (Escherichia coli strain 503440 plasmid p503440_52, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

162. spacer 2.6|982479|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025895 (Escherichia coli strain 503025 plasmid p503025_52, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

163. spacer 2.6|982479|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025867 (Escherichia coli strain 504211 plasmid p504211_50, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

164. spacer 2.6|982479|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025980 (Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

165. spacer 2.6|982479|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025871 (Escherichia coli strain 503829 plasmid p503829_52, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

166. spacer 2.6|982479|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054369 (Escherichia coli strain SCU-115 plasmid pSCU-115-1, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

167. spacer 2.6|982479|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006000 (Escherichia coli B7A plasmid pEB2, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

168. spacer 2.6|982479|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012377 (Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

169. spacer 2.6|982479|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050647 (Escherichia coli strain PapM-36-2 plasmid pIncFIB, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

170. spacer 2.6|982479|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

171. spacer 2.6|982479|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010126 (Escherichia coli strain C8 plasmid A, complete genome) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

172. spacer 2.6|982479|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031323 (Escherichia coli strain ST2350 isolate Es_ST2350_SE1_NDM_03_2018 plasmid pEsST2350_SE_2, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

173. spacer 2.9|982662|32|CP019202|CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ttggcatggctggcgacgtagcgaacaaaatc	CRISPR spacer
ttggcgtggctggcgacgtcgcgctcccggac	Protospacer
*****.************* ***  *  .. *

174. spacer 2.9|982662|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 9, identity: 0.719

ttggcatggctggcgacgtagcgaacaaaatc	CRISPR spacer
ttggcgtggctggcgacgtcgcgctcccggac	Protospacer
*****.************* ***  *  .. *

175. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009975 (Pseudomonas putida S12 plasmid pTTS12, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

176. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP039989 (Pseudomonas aeruginosa strain T2436 plasmid pBT2436, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

177. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP039991 (Pseudomonas aeruginosa strain T2101 plasmid pBT2101, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

178. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP045917 (Pseudomonas aeruginosa strain CF39S plasmid pCF39S, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

179. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to MF344571 (Pseudomonas aeruginosa plasmid pR31014-IMP, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

180. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to MF344568 (Pseudomonas aeruginosa plasmid p727-IMP, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

181. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to MF344569 (Pseudomonas aeruginosa plasmid p12939-PER, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

182. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to MF344570 (Pseudomonas aeruginosa plasmid pA681-IMP, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

183. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP039294 (Pseudomonas aeruginosa strain PABL048 plasmid pPABL048, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

184. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to CP027478 (Pseudomonas koreensis strain P19E3 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

185. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP040126 (Pseudomonas aeruginosa strain PA298 plasmid pBM908, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

186. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP015879 (Pseudomonas citronellolis strain SJTE-3 plasmid pRBL16, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

187. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP016215 (Pseudomonas aeruginosa strain PA121617 plasmid pBM413, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

188. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to NZ_KY883660 (Pseudomonas putida strain SY153 plasmid pSY153-MDR, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

189. spacer 2.12|982845|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP047261 (Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence) position: , mismatch: 9, identity: 0.719

caatgccgttttgcccgagttttcaccgccgt	CRISPR spacer
aaatgcggttttgcccgggttttcgaccacaa	Protospacer
 ***** **********.******. *  *.

190. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP044424 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN1, complete sequence) position: , mismatch: 9, identity: 0.719

ctctattgccgggggtcgagatggccgcctgc	CRISPR spacer
acggggcgccgggggacgagatggccgcccgc	Protospacer
 .  . .******** *************.**

191. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to KT381276 (Mycobacterium phage Serenity, complete genome) position: , mismatch: 9, identity: 0.719

ctctattgccgggggtcgagatggccgcctgc	CRISPR spacer
acacgctgccggtggtcgagatgaccgcctac	Protospacer
 . ...****** **********.******.*

192. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 9, identity: 0.719

ctctattgccgggggtcgagatggccgcctgc	CRISPR spacer
cccggcccacggaggccgagatggccgcctgc	Protospacer
*.* ...  ***.**.****************

193. spacer 2.18|983211|32|CP019202|CRISPRCasFinder,CRT matches to AP014927 (Ralstonia phage RSF1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

acatctcgcggacaatagcgatttccaccgtc	CRISPR spacer
tcgatgcgcggccaacagcgatttccaccgga	Protospacer
 *. . ***** ***.**************

194. spacer 2.22|983452|32|CP019202|CRISPRCasFinder,CRT matches to LR877331 (Klebsiella phage vB_KpnM_311F genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.719

caggattggattaatgaagacgggtacgaaat	CRISPR spacer
ctgcattggattgataaagacgggtactggga	Protospacer
* * ********.**.*********** ...

195. spacer 2.22|983452|32|CP019202|CRISPRCasFinder,CRT matches to MN434095 (Klebsiella pneumoniae phage JIPh_Kp122, complete genome) position: , mismatch: 9, identity: 0.719

caggattggattaatgaagacgggtacgaaat	CRISPR spacer
ctgcattggattgataaagacgggtactggga	Protospacer
* * ********.**.*********** ...

196. spacer 2.22|983452|32|CP019202|CRISPRCasFinder,CRT matches to KY000080 (Klebsiella phage KPV15, complete genome) position: , mismatch: 9, identity: 0.719

caggattggattaatgaagacgggtacgaaat	CRISPR spacer
ctgcattggattgataaagacgggtactggga	Protospacer
* * ********.**.*********** ...

197. spacer 2.22|983452|32|CP019202|CRISPRCasFinder,CRT matches to NC_028686 (Klebsiella phage JD18, complete genome) position: , mismatch: 9, identity: 0.719

caggattggattaatgaagacgggtacgaaat	CRISPR spacer
ctgcattggattgataaagacgggtactggga	Protospacer
* * ********.**.*********** ...

198. spacer 2.22|983452|32|CP019202|CRISPRCasFinder,CRT matches to MK421971 (Klebsiella phage vB_KpnM_GF, partial genome) position: , mismatch: 9, identity: 0.719

caggattggattaatgaagacgggtacgaaat	CRISPR spacer
ctgcattggattgataaagacgggtactggga	Protospacer
* * ********.**.*********** ...

199. spacer 2.27|983757|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tacctgccgggactggagtgcaggtaacccca	CRISPR spacer
cacctgcccggactgaagtgcaggccggccgg	Protospacer
.******* ******.********. . ** .

200. spacer 2.27|983757|32|CP019202|CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 9, identity: 0.719

tacctgccgggactggagtgcaggtaacccca	CRISPR spacer
cacctgcccggactgaagtgcaggccggccgg	Protospacer
.******* ******.********. . ** .

201. spacer 2.27|983757|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tacctgccgggactggagtgcaggtaacccca	CRISPR spacer
cacctgcccggactgaagtgcaggccggccgg	Protospacer
.******* ******.********. . ** .

202. spacer 2.29|983919|32|CP019202|CRISPRCasFinder matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 9, identity: 0.719

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
cgggaggtggtgttggtcacctggctgtccaa	Protospacer
. *  *****.*** ************** .

203. spacer 2.29|983919|32|CP019202|CRISPRCasFinder matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 9, identity: 0.719

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
gcgttggtggcgtccgtcacatgggccgcgcc	Protospacer
 ************.****** *** .  ** .

204. spacer 1.11|964886|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtggattgattctgatcgccgtgggcgggc	CRISPR spacer
cctgacgctgattctggtcgccgggggcgggg	Protospacer
 *  . ..********.****** *******

205. spacer 1.11|964886|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtggattgattctgatcgccgtgggcgggc	CRISPR spacer
cctgacgctgattctggtcgccgggggcgggg	Protospacer
 *  . ..********.****** *******

206. spacer 1.11|964886|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtggattgattctgatcgccgtgggcgggc	CRISPR spacer
cctgacgctgattctggtcgccgggggcgggg	Protospacer
 *  . ..********.****** *******

207. spacer 1.11|964886|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtggattgattctgatcgccgtgggcgggc	CRISPR spacer
cctgacgctgattctggtcgccgggggcgggg	Protospacer
 *  . ..********.****** *******

208. spacer 1.21|965497|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atgccctgttcggcaaaatcccgccacgctgg	CRISPR spacer
tggccctgtccggcacaatcccgccggagcag	Protospacer
  *******.***** *********. . ..*

209. spacer 1.26|965802|32|CP019202|CRISPRCasFinder,CRT matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
tcttatggcattattagatgaattttcaacaa	Protospacer
  .   . **************.***** ***

210. spacer 1.26|965802|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

211. spacer 1.26|965802|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

212. spacer 1.26|965802|32|CP019202|CRISPRCasFinder,CRT matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

213. spacer 1.26|965802|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

214. spacer 1.26|965802|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

215. spacer 1.26|965802|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

216. spacer 1.26|965802|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

217. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to NZ_KY494864 (Pseudomonas aeruginosa strain FFUP_PS_37 plasmid pJB37, complete sequence) position: , mismatch: 10, identity: 0.688

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacccgtgaagctg	Protospacer
 . * *** *************.*****...

218. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to NZ_LT969519 (Pseudomonas aeruginosa isolate RW109 genome assembly, plasmid: RW109 plasmid 1) position: , mismatch: 10, identity: 0.688

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacccgtgaagctg	Protospacer
 . * *** *************.*****...

219. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to NZ_MN433457 (Pseudomonas aeruginosa strain PAB546 plasmid pNK546-KPC, complete sequence) position: , mismatch: 10, identity: 0.688

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacccgtgaagctg	Protospacer
 . * *** *************.*****...

220. spacer 2.10|982723|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP045003 (Pseudomonas aeruginosa strain PAG5 plasmid pPAG5, complete sequence) position: , mismatch: 10, identity: 0.688

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacccgtgaagctg	Protospacer
 . * *** *************.*****...

221. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to MG962370 (Mycobacterium phage Kykar, complete genome) position: , mismatch: 10, identity: 0.688

ctctattgccgggggtcgagatggccgcctgc	CRISPR spacer
tcacgcagccggtggtcgagatgaccgcctac	Protospacer
.. ... ***** **********.******.*

222. spacer 2.13|982906|32|CP019202|CRISPRCasFinder,CRT matches to MK359312 (Mycobacterium phage Fushigi, complete genome) position: , mismatch: 10, identity: 0.688

ctctattgccgggggtcgagatggccgcctgc	CRISPR spacer
tcacgcagccggtggtcgagatgaccgcctac	Protospacer
.. ... ***** **********.******.*

223. spacer 2.14|982967|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP019603 (Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence) position: , mismatch: 10, identity: 0.688

gtgatccgcgcctatgacgcaatggtaacgac	CRISPR spacer
gtgatccgcgcctatgatgccatcaccggaaa	Protospacer
*****************.** ** .. . .*

224. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP018080 (Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gcatagacggccagccccaccggcggcgtcag	Protospacer
  . ************ ******.**** ..

225. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to NZ_CP020568 (Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
ggtcgaacggcccgccgcaccggcggcggcac	Protospacer
 .  ..****** **********.*****..*

226. spacer 2.16|983089|32|CP019202|CRISPRCasFinder,CRT matches to MH727593 (Acidovorax phage ACPWH, complete genome) position: , mismatch: 10, identity: 0.688

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gtcggcggggccggccgcaccgttggcggtgt	Protospacer
   *. . ****.********* ********.

227. spacer 2.29|983919|32|CP019202|CRISPRCasFinder matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.688

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
aatctcatggcgtccgtcccctggctgtcgtg	Protospacer
   .* .******.**** ***********

228. spacer 2.30|983980|32|CP019202|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

229. spacer 2.30|983980|32|CP019202|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

230. spacer 1.13|965008|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to NC_010683 (Ralstonia pickettii 12J plasmid pRPIC01, complete sequence) position: , mismatch: 11, identity: 0.656

agaatattcaactccagcgggaaaaagacgca	CRISPR spacer
tcgtcgctcaactccagcgtgaaaaaggcggg	Protospacer
  . ...************ *******.** .

231. spacer 2.5|982418|32|CP019202|PILER-CR,CRISPRCasFinder,CRT matches to KU963249 (Gordonia phage Yeezy, complete genome) position: , mismatch: 11, identity: 0.656

gcccaattgccggcgacggtttccatgtcagc	CRISPR spacer
gcgcaattgccggggacggtttctgcacagat	Protospacer
** ********** *********..... ...

232. spacer 2.22|983452|32|CP019202|CRISPRCasFinder,CRT matches to MH729874 (Klebsiella phage KP179, complete genome) position: , mismatch: 11, identity: 0.656

caggattggattaatgaagacgggtacgaaat	CRISPR spacer
ttacattggattgataaagacgggtactggga	Protospacer
. . ********.**.*********** ...

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1148817 : 1157793

Enterobacteria_phage(83.33%)

integrase

attL 1153586:1153601|attR 1160408:1160423

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM53349.1\|1148817_1151151_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	84.4
AUM53350.1\|1151165_1151486_-	hypothetical protein	NA	NA	NA	NA
AUM53351.1\|1151482_1151710_-	hypothetical protein	NA	NA	NA	NA
AUM53352.1\|1151706_1152258_-	Ash-like/host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.1e-30	70.4
AUM53353.1\|1153058_1153796_+	glycoprotein 3	Q7M2A2	Enterobacteria_phage	9.0e-81	64.4
1153586:1153601	attL	NA	NA	NA	NA
AUM53354.1\|1153792_1154035_+	hypothetical protein	Q7M294	Enterobacteria_phage	5.2e-30	77.8
AUM53355.1\|1154051_1154618_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.2e-56	62.7
AUM53356.1\|1154581_1154767_-	hypothetical protein	NA	NA	NA	NA
AUM53357.1\|1155150_1156560_+	hypothetical protein	NA	NA	NA	NA
AUM53358.1\|1156596_1157793_-\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	4.1e-107	50.0
1160408:1160423	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1687017 : 1696188

Enterobacteria_phage(71.43%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM53813.1\|1687017_1687965_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
AUM53814.1\|1687948_1688680_+	ABC transporter permease	NA	NA	NA	NA
AUM53815.1\|1688660_1688768_-	hypothetical protein	NA	NA	NA	NA
AUM53816.1\|1688827_1689559_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
AUM53817.1\|1689781_1691467_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
AUM53818.1\|1691463_1692183_+	DNA-binding response regulator	NA	NA	NA	NA
AUM53819.1\|1692229_1692697_+	hypothetical protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
AUM53820.1\|1692753_1693284_-	hypothetical protein	Q9EYF5	Enterobacteria_phage	2.8e-15	31.7
AUM53821.1\|1693455_1693914_-	lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
AUM53822.1\|1694154_1696188_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	6.1e-55	26.9

DBSCAN-SWA_3

1851245 : 1861844

Morganella_phage(25.0%)

integrase

attL 1846236:1846256|attR 1852848:1852868

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1846236:1846256	attL	NA	NA	NA	NA
AUM53959.1\|1851245_1851719_-	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	2.1e-38	76.6
AUM53960.1\|1852365_1852656_-\|integrase	integrase	B7SYF8	Stenotrophomonas_phage	3.0e-08	49.1
AUM53961.1\|1853027_1853825_-	protein MtfA	NA	NA	NA	NA
1852848:1852868	attR	NA	NA	NA	NA
AUM53962.1\|1854593_1855013_+	DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
AUM53963.1\|1855015_1856284_+	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	9.3e-227	92.2
AUM53964.1\|1856738_1856951_+	cold-shock protein CspJ	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
AUM56521.1\|1856961_1857150_+	cold-shock protein	NA	NA	NA	NA
AUM53965.1\|1857408_1858605_-	porin	Q1MVN1	Enterobacteria_phage	4.3e-109	56.6
AUM53966.1\|1859253_1859565_+	hypothetical protein	NA	NA	NA	NA
AUM53967.1\|1859644_1860340_+	phosphohydrolase	S4W232	Pandoravirus	3.6e-07	28.0
AUM53968.1\|1860413_1861844_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_4

1931016 : 2058656

169

Salmonella_phage(35.43%)

tRNA,terminase,lysis,tail,head,capsid,portal,integrase,holin,transposase

attL 2046652:2046667|attR 2057865:2057880

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM54042.1\|1931016_1932750_-\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	4.9e-85	33.4
AUM54043.1\|1932986_1933556_+	VOC family protein	NA	NA	NA	NA
AUM54044.1\|1934557_1935529_-\|tRNA	tRNA (mo5U34)-methyltransferase	NA	NA	NA	NA
AUM54045.1\|1935525_1936269_-	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	5.4e-25	30.9
AUM54046.1\|1936309_1936705_-	hypothetical protein	NA	NA	NA	NA
AUM54047.1\|1936757_1937528_-	hypothetical protein	Q859D1	Escherichia_coli_phage	5.5e-57	80.3
AUM54048.1\|1937509_1938823_-\|integrase	integrase	Q8W658	Enterobacteria_phage	2.3e-228	87.4
AUM54049.1\|1938881_1939118_-	excisionase	Q8W657	Enterobacteria_phage	4.2e-40	93.6
AUM54050.1\|1939156_1939726_-	ATPase	A0A192Y6E0	Salmonella_phage	1.3e-90	82.5
AUM54051.1\|1940774_1941530_-	hypothetical protein	A0A1R3Y5Q7	Salmonella_virus	2.4e-150	99.2
AUM54052.1\|1941529_1942096_-	hypothetical protein	C6ZR30	Salmonella_phage	5.1e-52	66.9
AUM54053.1\|1942092_1942563_-	hypothetical protein	Q76H44	Enterobacteria_phage	1.5e-33	61.4
AUM54054.1\|1942559_1942730_-	hypothetical protein	I6S642	Salmonella_phage	6.1e-25	100.0
AUM54055.1\|1942740_1943034_-	RecBCD nuclease inhibitor	I6R984	Salmonella_phage	2.5e-50	100.0
AUM54056.1\|1943080_1943365_-	RecBCD nuclease inhibitor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
AUM54057.1\|1943364_1944072_-	recombinase	I6R0N0	Salmonella_phage	1.9e-133	96.2
AUM54058.1\|1944201_1944390_-	protein kil	I6S647	Salmonella_phage	3.7e-31	100.0
AUM54059.1\|1944370_1944529_-	hypothetical protein	Q76H38	Enterobacteria_phage	2.4e-23	100.0
AUM54060.1\|1944861_1945140_-	hypothetical protein	C6ZR42	Salmonella_phage	1.3e-45	100.0
AUM54061.1\|1945173_1945893_-	hypothetical protein	Q76H35	Enterobacteria_phage	1.5e-43	87.9
AUM54062.1\|1945976_1946171_-	restriction endonuclease	A0A2H4FS18	Salmonella_phage	2.5e-30	100.0
AUM54063.1\|1946249_1946588_-	hypothetical protein	E7C9Q7	Salmonella_phage	1.5e-54	94.6
AUM54064.1\|1946607_1946835_+	hypothetical protein	A0A075B8J1	Enterobacteria_phage	1.7e-30	100.0
AUM54065.1\|1946966_1947170_+	hypothetical protein	A0A2H5BFH9	Salmonella_phage	2.0e-27	100.0
AUM54066.1\|1947305_1947617_-	hypothetical protein	C6ZR45	Salmonella_phage	1.7e-44	99.0
AUM54067.1\|1947603_1948041_-	hypothetical protein	C6ZR46	Salmonella_phage	3.7e-74	97.2
AUM54068.1\|1948102_1948789_-	hypothetical protein	G8C7U1	Escherichia_phage	4.7e-92	76.4
AUM54069.1\|1948898_1949126_+	transcriptional regulator	A0A2H4FNF3	Salmonella_phage	1.1e-26	78.7
AUM54070.1\|1949234_1949525_+	hypothetical protein	I6RSP4	Salmonella_phage	2.4e-45	100.0
AUM54071.1\|1949546_1949807_+	hypothetical protein	G9L679	Escherichia_phage	3.4e-27	74.1
AUM56523.1\|1949869_1950730_+	replication protein	G9L680	Escherichia_phage	3.6e-89	65.0
AUM54072.1\|1950726_1952094_+	replicative DNA helicase	Q76H51	Enterobacteria_phage	2.3e-239	94.8
AUM54073.1\|1952090_1952357_+	hypothetical protein	NA	NA	NA	NA
AUM54074.1\|1952374_1952632_+	hypothetical protein	A0A1S5RG58	Helicobacter_phage	1.3e-10	46.0
AUM54075.1\|1952628_1952907_+	hypothetical protein	Q5G8S7	Enterobacteria_phage	5.1e-45	93.5
AUM54076.1\|1952977_1953250_+	hypothetical protein	Q9ZWY1	Enterobacteria_phage	9.7e-41	91.0
AUM54077.1\|1953252_1953549_+	hypothetical protein	E7C9R7	Salmonella_phage	1.1e-42	89.8
AUM54078.1\|1953505_1953952_+	protein ninB	I6R0N7	Salmonella_phage	7.8e-80	98.0
AUM54079.1\|1953948_1954125_+	protein ninE	A0A220NRK6	Escherichia_phage	3.9e-27	96.6
AUM54080.1\|1954127_1954529_+	hypothetical protein	G9L690	Escherichia_phage	6.0e-63	85.0
AUM54081.1\|1954521_1954698_+	protein ninF	K7P6R5	Enterobacteria_phage	9.1e-24	91.2
AUM54082.1\|1954690_1954927_+	hypothetical protein	C6ZR59	Salmonella_phage	8.1e-36	92.3
AUM54083.1\|1954907_1955378_+	hypothetical protein	C6ZR60	Salmonella_phage	4.8e-88	95.5
AUM54084.1\|1955365_1955548_+	hypothetical protein	C6ZR61	Salmonella_phage	2.5e-24	98.3
AUM54085.1\|1955544_1956168_+	antitermination protein	C6ZR62	Salmonella_phage	1.5e-113	99.0
AUM54086.1\|1956539_1957028_+	hypothetical protein	A0A248SKL5	Klebsiella_phage	4.7e-38	50.3
AUM54087.1\|1957109_1957631_+	endodeoxyribonuclease	A0A1V0E5R7	Salmonella_phage	1.6e-55	62.8
AUM54088.1\|1957856_1958183_+\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-52	100.0
AUM54089.1\|1958166_1958604_+	muraminidase	Q5G8R3	Enterobacteria_phage	1.1e-73	97.9
AUM54090.1\|1958600_1959038_+\|lysis	lysis protein	A0A0N6WGE8	Salmonella_phage	2.1e-69	94.5
AUM54091.1\|1959366_1959870_+	hypothetical protein	NA	NA	NA	NA
AUM54092.1\|1959937_1960282_+	HNH endonuclease	K7P7P6	Enterobacteria_phage	3.9e-47	73.9
AUM54093.1\|1960414_1960879_+\|terminase	terminase	Q9B019	Phage_GMSE-1	1.3e-48	62.1
AUM54094.1\|1960832_1962575_+\|terminase	terminase	A0A0U2C138	Paracoccus_phage	2.8e-141	46.2
AUM54095.1\|1962574_1963882_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	6.4e-215	85.5
AUM54096.1\|1963895_1964744_+	peptidase S14	K7PH05	Enterobacteria_phage	3.4e-132	88.2
AUM54097.1\|1964753_1965971_+\|capsid	capsid protein	K7PM57	Enterobacteria_phage	6.0e-199	88.9
AUM56524.1\|1966256_1966583_+	hypothetical protein	K7PKT4	Enterobacteria_phage	5.2e-49	85.2
AUM54098.1\|1966592_1966931_+\|head,tail	head-tail adaptor protein	A0A2H4JHK5	uncultured_Caudovirales_phage	6.6e-39	70.5
AUM54099.1\|1966927_1967377_+	hypothetical protein	S4TR46	Salmonella_phage	7.1e-73	96.0
AUM54100.1\|1967373_1967721_+	hypothetical protein	S4TTG3	Salmonella_phage	5.5e-57	96.5
AUM54101.1\|1967777_1968482_+\|tail	phage tail protein	K7PHL2	Enterobacterial_phage	4.4e-93	74.4
AUM54102.1\|1968509_1968881_+\|tail	phage tail protein	S4TSQ0	Salmonella_phage	8.8e-61	93.4
AUM56525.1\|1968904_1969183_+\|tail	phage tail protein	S4TND7	Salmonella_phage	1.9e-44	100.0
AUM54103.1\|1969239_1969575_+	hypothetical protein	S4TR42	Salmonella_phage	7.0e-57	100.0
AUM54104.1\|1969621_1972936_+\|tail	phage tail tape measure protein	S4TTF9	Salmonella_phage	0.0e+00	95.5
AUM54105.1\|1973038_1973287_-	hypothetical protein	NA	NA	NA	NA
AUM54106.1\|1973450_1974044_+	hypothetical protein	S4TSP7	Salmonella_phage	1.9e-110	99.5
AUM54107.1\|1974043_1974628_+	hypothetical protein	S4TND4	Salmonella_phage	7.0e-105	96.9
AUM54108.1\|1974634_1975033_+	hypothetical protein	S4TR39	Salmonella_phage	2.9e-70	94.7
AUM54109.1\|1975032_1977753_+\|tail	phage tail protein	S4TTF5	Salmonella_phage	0.0e+00	99.8
AUM54110.1\|1977761_1978721_+	hypothetical protein	H6WRW5	Salmonella_phage	9.6e-184	100.0
AUM54111.1\|1978731_1980030_+\|tail	phage tail protein	I6R0Q9	Salmonella_phage	4.5e-245	99.5
AUM54112.1\|1980266_1980686_+	DNA polymerase V subunit UmuD	I6S1S3	Salmonella_phage	6.5e-36	100.0
AUM54113.1\|1980688_1981957_+	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	2.8e-231	92.7
AUM54114.1\|1981949_1982621_-	DUF159 family protein	A0A2H4J5W2	uncultured_Caudovirales_phage	2.8e-81	61.3
AUM54115.1\|1982943_1983510_-	hydrolase	NA	NA	NA	NA
AUM54116.1\|1983834_1985607_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
AUM54117.1\|1985709_1986162_+	NUDIX pyrophosphatase	NA	NA	NA	NA
AUM54118.1\|1986191_1986932_+	transcriptional regulator	NA	NA	NA	NA
AUM54119.1\|1986968_1987490_+	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.6e-10	35.1
AUM54120.1\|1987491_1988091_-	hypothetical protein	NA	NA	NA	NA
AUM56526.1\|1988517_1988994_+	hypothetical protein	NA	NA	NA	NA
AUM54121.1\|1989353_1989965_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AUM54122.1\|1989973_1990984_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.4e-07	25.9
AUM54123.1\|1991062_1991848_-	zinc ABC transporter permease	NA	NA	NA	NA
AUM54124.1\|1991844_1992600_-	Mn2+/Zn2+ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.5e-18	29.4
AUM54125.1\|1992663_1993623_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
AUM54126.1\|1993638_1994958_+	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	2.6e-14	40.9
AUM54127.1\|1994848_1995076_-	hypothetical protein	NA	NA	NA	NA
AUM54128.1\|1995074_1996046_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
AUM54129.1\|1996118_1997561_-	pyruvate kinase II	NA	NA	NA	NA
AUM54130.1\|1997684_1998554_-	transcriptional regulator HexR	NA	NA	NA	NA
AUM54131.1\|1998737_1998923_-	hypothetical protein	NA	NA	NA	NA
AUM54132.1\|1998895_2000371_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	2.6e-79	37.5
AUM54133.1\|2000605_2002417_+	phosphogluconate dehydratase	NA	NA	NA	NA
AUM54134.1\|2002454_2003096_+	keto-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
AUM54135.1\|2003195_2004374_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
AUM54136.1\|2004504_2004795_+	damage-inducible protein YebG	NA	NA	NA	NA
AUM54137.1\|2004862_2005216_+	hypothetical protein	NA	NA	NA	NA
AUM54138.1\|2005309_2005969_+	protein YebE	NA	NA	NA	NA
AUM54139.1\|2006182_2008234_+	oligopeptidase B	NA	NA	NA	NA
AUM54140.1\|2008268_2008967_-	DNA polymerase III subunit epsilon	Q6UAU3	Klebsiella_phage	2.8e-07	40.4
AUM54141.1\|2008990_2009647_-	carbon-nitrogen hydrolase	NA	NA	NA	NA
AUM54142.1\|2009754_2009985_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3
AUM54143.1\|2010122_2010497_+	hypothetical protein	NA	NA	NA	NA
AUM54144.1\|2010497_2011373_+	hypothetical protein	NA	NA	NA	NA
AUM54145.1\|2011389_2011743_+	hypothetical protein	NA	NA	NA	NA
AUM54146.1\|2012125_2013205_-\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.3e-101	52.8
AUM56527.1\|2013179_2013452_-	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	1.4e-10	37.5
AUM54147.1\|2013530_2013947_-	hypothetical protein	NA	NA	NA	NA
AUM54148.1\|2013943_2016025_-	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	1.8e-198	52.1
AUM54149.1\|2016021_2016279_-	hypothetical protein	NA	NA	NA	NA
AUM54150.1\|2016372_2016552_-	hypothetical protein	A0A0U2QL97	Escherichia_phage	6.2e-12	60.3
AUM54151.1\|2016539_2017382_-	DNA methyltransferase	A0A0K1LM14	Caulobacter_phage	4.0e-69	49.8
AUM54152.1\|2017378_2017612_-	hypothetical protein	S4TVX5	Salmonella_phage	4.3e-13	47.7
AUM54153.1\|2017646_2018477_-	recombination and repair protein RecT	A0A1P8DTF2	Proteus_phage	1.0e-104	72.0
AUM54154.1\|2018469_2021160_-	exonuclease VIII	Q9QF34	Lambdoid_phage	8.0e-119	84.4
AUM54155.1\|2021300_2021636_-	hypothetical protein	NA	NA	NA	NA
AUM54156.1\|2021710_2021995_-	hypothetical protein	K7PGY4	Enterobacteria_phage	1.7e-08	53.2
AUM54157.1\|2022376_2022532_-	hypothetical protein	M4QQ57	Salicola_phage	8.0e-08	55.3
AUM54158.1\|2022828_2023227_-	transcriptional regulator	K7PH19	Enterobacteria_phage	1.2e-18	56.0
AUM54159.1\|2023325_2023580_+	transcriptional regulator	K7PKH4	Enterobacteria_phage	5.3e-17	60.9
AUM54160.1\|2024104_2025112_+	hypothetical protein	A0A0U2RT81	Escherichia_phage	6.2e-125	68.1
AUM54161.1\|2025104_2025566_+	replication protein	A0A0U2JGJ0	Escherichia_phage	7.8e-67	74.8
AUM54162.1\|2025579_2025975_+	DNA-binding protein	A0A088CBK9	Shigella_phage	1.7e-17	38.1
AUM54163.1\|2025971_2026244_+	hypothetical protein	NA	NA	NA	NA
AUM54164.1\|2026853_2027102_+	hypothetical protein	NA	NA	NA	NA
AUM54165.1\|2027165_2027765_+	hypothetical protein	A0A0U2RT94	Escherichia_phage	5.0e-98	83.9
AUM54166.1\|2027761_2027956_+	hypothetical protein	S4TNP0	Salmonella_phage	6.1e-13	61.5
AUM54167.1\|2027952_2028234_+	hypothetical protein	K7P7Q1	Enterobacteria_phage	1.7e-35	79.1
AUM54168.1\|2028230_2028785_+	antiterminator	A0A0U2S606	Escherichia_phage	2.8e-63	64.6
AUM54169.1\|2029030_2029207_+	addiction module toxin, HicA family	A0A0M3LQ86	Mannheimia_phage	1.2e-12	60.3
AUM54170.1\|2029257_2029665_+	antitoxin	F1C593	Cronobacter_phage	1.4e-38	63.0
AUM56528.1\|2029814_2030117_+	alpha/beta hydrolase	NA	NA	NA	NA
AUM54171.1\|2030094_2030634_+	lysozyme	K7PLY1	Enterobacteria_phage	3.4e-77	71.8
AUM54172.1\|2030734_2031199_+\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	6.3e-56	81.7
AUM54173.1\|2031424_2031607_+	hypothetical protein	NA	NA	NA	NA
AUM54174.1\|2031677_2032307_+	hypothetical protein	A0A0M3ULJ9	Salmonella_phage	9.6e-108	98.1
AUM54175.1\|2032309_2033929_+	TerL protein	A0A0M5M1R6	Salmonella_phage	1.5e-261	81.2
AUM54176.1\|2033928_2035449_+	hypothetical protein	A0A2R3UAL5	Myoviridae_environmental_samples	3.1e-104	43.9
AUM54177.1\|2035489_2036179_+\|head	phage head morphogenesis protein	H9C0V1	Aeromonas_phage	4.5e-58	49.6
AUM54178.1\|2036175_2037522_+	hypothetical protein	A0A219YCD3	Aeromonas_phage	4.2e-68	37.2
AUM54179.1\|2037523_2038006_+	hypothetical protein	A0A1X9SFC3	Acinetobacter_phage	1.1e-26	48.8
AUM54180.1\|2038005_2039034_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	2.3e-82	48.7
AUM54181.1\|2039037_2039385_+	hypothetical protein	H9C0V9	Aeromonas_phage	3.0e-10	40.2
AUM54182.1\|2039391_2039847_+	hypothetical protein	A0A068CGG9	Acinetobacter_phage	2.4e-15	40.8
AUM54183.1\|2039840_2040425_+	hypothetical protein	H9C0W2	Aeromonas_phage	3.2e-17	30.6
AUM54184.1\|2040421_2040787_+	hypothetical protein	A0A077KAW7	Edwardsiella_phage	8.8e-21	39.7
AUM54185.1\|2040771_2041317_+	hypothetical protein	NA	NA	NA	NA
AUM54186.1\|2041297_2042782_+	hypothetical protein	A0A077KGV4	Edwardsiella_phage	4.0e-96	41.0
AUM54187.1\|2042782_2043229_+	hypothetical protein	Q2NPD1	Xanthomonas_phage	4.8e-21	40.4
AUM54188.1\|2043228_2043633_+	hypothetical protein	H9C0W7	Aeromonas_phage	8.2e-20	44.8
AUM54189.1\|2043674_2043857_+	transcription elongation factor GreA	NA	NA	NA	NA
AUM54190.1\|2043840_2046012_+	transglycosylase	A0A0M4REK7	Salmonella_phage	1.4e-49	67.1
AUM54191.1\|2046008_2046719_+	hypothetical protein	A0A077KGW3	Edwardsiella_phage	5.0e-28	34.6
2046652:2046667	attL	NA	NA	NA	NA
AUM54192.1\|2046718_2047021_+	hypothetical protein	A0A077K9U4	Edwardsiella_phage	2.4e-24	50.5
AUM54193.1\|2047017_2047887_+	hypothetical protein	A0A077KC17	Edwardsiella_phage	5.3e-32	32.7
AUM54194.1\|2047867_2048545_+	oxidoreductase	A0A077KAY0	Edwardsiella_phage	1.6e-31	36.0
AUM54195.1\|2048557_2048914_+	hypothetical protein	A0A077KCA1	Edwardsiella_phage	1.6e-19	49.1
AUM54196.1\|2048910_2050152_+	hypothetical protein	A0A077KGW9	Edwardsiella_phage	9.1e-102	49.9
AUM54197.1\|2050153_2050756_+	hypothetical protein	H9C0Y0	Aeromonas_phage	5.9e-30	43.2
AUM54198.1\|2050745_2052197_+	short-chain dehydrogenase	E5G6P0	Salmonella_phage	7.3e-42	70.2
AUM54199.1\|2052193_2053018_+\|tail	phage tail protein	A0A0M4QWS3	Salmonella_phage	1.2e-150	93.4
AUM54200.1\|2053007_2053577_+\|tail	phage tail protein	A0A0M4RTP2	Salmonella_phage	3.2e-94	88.4
AUM54201.1\|2053726_2054581_+	protein YibB	NA	NA	NA	NA
AUM54202.1\|2054649_2056191_-	hypothetical protein	NA	NA	NA	NA
AUM54203.1\|2056954_2057263_-\|integrase	integrase	K7PHK0	Enterobacteria_phage	3.9e-14	41.9
AUM54204.1\|2057447_2058656_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.3e-46	48.7
2057865:2057880	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2879095 : 2953587

Bacillus_phage(16.67%)

tRNA,transposase,protease,integrase

attL 2894427:2894444|attR 2949233:2949250

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM54997.1\|2879095_2880496_+\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	1.3e-80	34.9
AUM54998.1\|2881102_2882194_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	1.7e-99	51.7
AUM54999.1\|2882378_2883569_+	aspartate aminotransferase	NA	NA	NA	NA
AUM55000.1\|2883592_2884276_-\|transposase	transposase	Q6H9S3	Enterobacteria_phage	2.6e-18	34.5
AUM55001.1\|2884446_2884848_-\|transposase	transposase	NA	NA	NA	NA
AUM55002.1\|2884945_2885593_-	MBL fold hydrolase	NA	NA	NA	NA
AUM55003.1\|2885620_2886169_-	outer membrane protein	A0A0K1LKR7	Rhodobacter_phage	1.2e-05	33.7
AUM55004.1\|2886428_2888276_-	L,D-transpeptidase	NA	NA	NA	NA
AUM55005.1\|2888620_2893087_-	cell division protein MukB	NA	NA	NA	NA
AUM55006.1\|2893086_2893791_-	condensin subunit E	NA	NA	NA	NA
AUM55007.1\|2893771_2895094_-	chromosome partition protein MukF	NA	NA	NA	NA
2894427:2894444	attL	NA	NA	NA	NA
AUM55008.1\|2895086_2895890_-	S-adenosyl-L-methionine-dependent methyltransferase	NA	NA	NA	NA
AUM55009.1\|2896025_2896802_+	hypothetical protein	NA	NA	NA	NA
AUM55010.1\|2896781_2897675_-	hypothetical protein	NA	NA	NA	NA
AUM55011.1\|2897885_2898632_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AUM55012.1\|2898628_2898811_-	hypothetical protein	NA	NA	NA	NA
AUM55013.1\|2898862_2900095_-	hypothetical protein	NA	NA	NA	NA
AUM55014.1\|2900138_2901116_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AUM55015.1\|2901112_2902861_-	lipid A export ATP-binding/permease MsbA	W8CYL7	Bacillus_phage	3.2e-60	30.5
AUM55016.1\|2902897_2905162_-	ComEC family protein	Q332C0	Clostridium_botulinum_C_phage	1.1e-09	22.5
AUM55017.1\|2905391_2905676_-	integration host factor subunit beta	A7KV42	Bacillus_phage	4.1e-10	40.2
AUM55018.1\|2905831_2907505_-	30S ribosomal protein S1	NA	NA	NA	NA
AUM55019.1\|2907618_2908302_-	cytidylate kinase	NA	NA	NA	NA
AUM55020.1\|2908474_2909236_-\|protease	metalloprotease	NA	NA	NA	NA
AUM55021.1\|2909378_2910662_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AUM55022.1\|2910732_2911821_-	3-phosphoserine/phosphohydroxythreonine aminotransferase	M1Q1P2	Streptococcus_phage	2.8e-78	46.5
AUM55023.1\|2912006_2912699_-	DUF421 domain-containing protein	NA	NA	NA	NA
AUM56562.1\|2912826_2914596_+	ribosomal protein S12 methylthiotransferase accessory factor YcaO	NA	NA	NA	NA
AUM55024.1\|2915000_2915858_+	formate transporter FocA	NA	NA	NA	NA
AUM55025.1\|2915917_2918200_+	formate acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.1e-161	42.0
AUM55026.1\|2918275_2919235_-	pathogenicity island 1 protein SopD2	NA	NA	NA	NA
AUM55027.1\|2919821_2920619_+	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	2.7e-22	26.5
AUM55028.1\|2920910_2922332_-	transporter	NA	NA	NA	NA
AUM55029.1\|2922549_2923698_-	MFS transporter	NA	NA	NA	NA
AUM55030.1\|2924047_2924911_-	dimethyl sulfoxide reductase	NA	NA	NA	NA
AUM55031.1\|2924912_2925530_-	dimethylsulfoxide reductase, chain B	A0A077SL61	Escherichia_phage	5.6e-76	59.1
AUM55032.1\|2925540_2927985_-	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	5.4e-223	50.5
AUM55033.1\|2928221_2929514_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.6e-95	44.5
AUM55034.1\|2929772_2931116_-	recombination factor protein RarA	G3MBE0	Bacillus_virus	1.6e-80	40.9
AUM56563.1\|2931125_2931737_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AUM56564.1\|2931879_2935914_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	2.9e-88	49.5
AUM55035.1\|2936048_2936543_-	leucine-responsive regulatory protein	NA	NA	NA	NA
AUM55036.1\|2936471_2936747_+	hypothetical protein	NA	NA	NA	NA
AUM55037.1\|2937089_2938058_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.1e-62	45.5
AUM55038.1\|2938171_2939938_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.5e-22	25.3
AUM55039.1\|2939938_2941660_+	amino acid ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.9e-13	23.5
AUM55040.1\|2941704_2942409_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AUM55041.1\|2942409_2942793_+	hypothetical protein	NA	NA	NA	NA
AUM55042.1\|2942720_2942939_+	translation initiation factor IF-1	NA	NA	NA	NA
AUM55043.1\|2943029_2943941_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUM55044.1\|2944049_2944910_+	quercetin 2,3-dioxygenase	NA	NA	NA	NA
AUM55045.1\|2944929_2945607_+	hydrolase	NA	NA	NA	NA
AUM55046.1\|2946274_2946652_+\|integrase	integrase	A0A077KET4	Ralstonia_phage	1.0e-19	40.2
AUM55047.1\|2946813_2947011_+	hypothetical protein	NA	NA	NA	NA
AUM55048.1\|2947223_2949500_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
2949233:2949250	attR	NA	NA	NA	NA
AUM55049.1\|2949530_2949851_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
AUM55050.1\|2950174_2950396_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
AUM55051.1\|2950350_2950545_-	hypothetical protein	NA	NA	NA	NA
AUM55052.1\|2950525_2952472_-	MacB family efflux pump subunit	G9BWD6	Planktothrix_phage	9.1e-40	42.3
AUM55053.1\|2952468_2953587_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9

DBSCAN-SWA_6

4278908 : 4323431

Burkholderia_phage(38.1%)

tRNA,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM56230.1\|4278908_4279907_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AUM56231.1\|4279994_4281305_-	conjugal transfer protein	NA	NA	NA	NA
AUM56232.1\|4281551_4282067_+	transcriptional regulator Zur	NA	NA	NA	NA
AUM56233.1\|4282165_4282378_-	CsbD family protein	NA	NA	NA	NA
AUM56234.1\|4282506_4283832_-	MATE family efflux transporter	NA	NA	NA	NA
AUM56235.1\|4284010_4284619_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
AUM56236.1\|4284727_4285096_-	diacylglycerol kinase	NA	NA	NA	NA
AUM56237.1\|4285266_4287687_+	glycerol-3-phosphate 1-O-acyltransferase	NA	NA	NA	NA
AUM56238.1\|4287785_4288658_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
AUM56239.1\|4288671_4289169_-	chorismate--pyruvate lyase	NA	NA	NA	NA
AUM56240.1\|4289349_4290267_-	maltose operon protein MalM	NA	NA	NA	NA
AUM56241.1\|4290430_4291789_-	maltoporin	NA	NA	NA	NA
AUM56242.1\|4291877_4292987_-	maltose/maltodextrin import ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
AUM56243.1\|4293348_4294539_+	maltose ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
AUM56244.1\|4294670_4296215_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
AUM56245.1\|4296229_4297120_+	maltose ABC transporter permease	NA	NA	NA	NA
AUM56246.1\|4297285_4297696_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
AUM56247.1\|4297838_4299935_-	hypothetical protein	NA	NA	NA	NA
AUM56248.1\|4299934_4300669_-	hypothetical protein	NA	NA	NA	NA
AUM56249.1\|4300665_4301304_-	hypothetical protein	NA	NA	NA	NA
AUM56250.1\|4301367_4301613_-	hypothetical protein	NA	NA	NA	NA
AUM56251.1\|4302053_4303703_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
AUM56252.1\|4304047_4305397_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
AUM56253.1\|4305527_4305875_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
AUM56254.1\|4306451_4306739_+	hypothetical protein	Q6QIC8	Burkholderia_phage	3.0e-16	48.1
AUM56255.1\|4306741_4307347_+	lytic murein transglycosylase	Q5ZQZ1	Pseudomonas_phage	5.5e-60	59.4
AUM56256.1\|4307359_4307674_+	hypothetical protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
AUM56257.1\|4307833_4308289_+	hypothetical protein	NA	NA	NA	NA
AUM56258.1\|4308285_4308483_+	hypothetical protein	Q6QIB1	Burkholderia_phage	1.3e-07	50.0
AUM56259.1\|4308472_4309900_+\|tail	phage tail protein	A4JWK5	Burkholderia_virus	3.1e-194	70.9
AUM56260.1\|4309899_4310424_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
AUM56261.1\|4310475_4310793_+	hypothetical protein	NA	NA	NA	NA
AUM56262.1\|4310752_4310881_+	hypothetical protein	NA	NA	NA	NA
AUM56263.1\|4310977_4313275_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	8.5e-61	27.3
AUM56264.1\|4313331_4314285_+	chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
AUM56265.1\|4314284_4314494_+	hypothetical protein	A4JWL2	Burkholderia_virus	2.2e-16	60.3
AUM56266.1\|4314481_4315525_+	phage protein D	A4JWL3	Burkholderia_virus	1.9e-76	45.6
AUM56267.1\|4315534_4316257_+\|plate	baseplate protein	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
AUM56268.1\|4316584_4316947_+	translocase	I1TED9	Salmonella_phage	1.2e-43	70.8
AUM56269.1\|4316943_4317873_+	glycosyltransferase	S5FKN0	Shigella_phage	6.7e-150	83.8
AUM56270.1\|4317872_4319420_+	hypothetical protein	B9UDL6	Salmonella_phage	2.5e-48	29.9
AUM56271.1\|4319583_4319943_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
AUM56272.1\|4319933_4321049_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	3.1e-101	52.2
AUM56273.1\|4321041_4321674_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	8.6e-24	56.4
AUM56274.1\|4321676_4323431_+\|tail	phage tail protein	A0A0M3ULF6	Salmonella_phage	4.2e-52	52.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP019203

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

41709 : 107536

Escherichia_phage(39.13%)

portal,tRNA,holin,lysis,plate,terminase,head,integrase,capsid,tail

attL 74624:74670|attR 105362:105408

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM56660.1\|41709_42147_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
AUM56661.1\|42143_43133_+	acetyltransferase	NA	NA	NA	NA
AUM56662.1\|43147_43594_-	transcriptional regulator	NA	NA	NA	NA
AUM56663.1\|43590_43902_-	cytoplasmic protein	NA	NA	NA	NA
AUM56664.1\|43987_44917_-	lipase	A0A167RJ59	Powai_lake_megavirus	4.5e-29	34.4
AUM56665.1\|45134_45446_+	toxin HigB-2	NA	NA	NA	NA
AUM56666.1\|45446_45737_+	transcriptional regulator	NA	NA	NA	NA
AUM56667.1\|45783_46713_-	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA
AUM56668.1\|46709_47345_-	formate dehydrogenase cytochrome b556 subunit	NA	NA	NA	NA
AUM56669.1\|47341_48244_-	formate dehydrogenase subunit beta	NA	NA	NA	NA
AUM56670.1\|48256_50671_-	formate dehydrogenase-N subunit alpha	NA	NA	NA	NA
AUM56671.1\|50719_51307_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUM56672.1\|51501_52338_+	sulfurtransferase FdhD	NA	NA	NA	NA
AUM56673.1\|52613_53645_-	hypothetical protein	NA	NA	NA	NA
AUM56674.1\|53826_54927_+	hypothetical protein	NA	NA	NA	NA
AUM56675.1\|55281_55605_-	branched-chain amino acid transport	NA	NA	NA	NA
AUM56676.1\|55604_56264_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUM56797.1\|56346_56913_+	transcriptional regulator	NA	NA	NA	NA
AUM56677.1\|57001_57316_-	L-rhamnose mutarotase	NA	NA	NA	NA
AUM56678.1\|57312_58461_-	lactaldehyde reductase	NA	NA	NA	NA
AUM56679.1\|58587_59415_-	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA
AUM56680.1\|59557_60817_-	L-rhamnose isomerase	NA	NA	NA	NA
AUM56681.1\|60813_62283_-	rhamnulokinase	NA	NA	NA	NA
AUM56682.1\|62570_63407_+	transcriptional activator RhaS	NA	NA	NA	NA
AUM56683.1\|63559_64408_+	HTH-type transcriptional activator RhaR	NA	NA	NA	NA
AUM56684.1\|64404_65439_-	rhamnose/proton symporter RhaT	NA	NA	NA	NA
AUM56685.1\|66057_66741_+	hypothetical protein	NA	NA	NA	NA
AUM56686.1\|66898_68206_-	hypothetical protein	NA	NA	NA	NA
AUM56687.1\|68198_68714_-	TRAP transporter small permease protein	NA	NA	NA	NA
AUM56688.1\|68732_69716_-	hypothetical protein	NA	NA	NA	NA
AUM56689.1\|70044_70665_+	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	2.4e-63	58.9
AUM56690.1\|70734_71424_+	MOSC domain-containing protein	NA	NA	NA	NA
AUM56691.1\|71435_71831_+	hypothetical protein	NA	NA	NA	NA
AUM56692.1\|71881_73255_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.2e-15	25.6
AUM56693.1\|73251_73950_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.4e-35	39.6
AUM56694.1\|74100_74601_+	stress adaptor protein CpxP	NA	NA	NA	NA
74624:74670	attL	NA	NA	NA	NA
AUM56695.1\|74786_75767_-\|integrase	integrase	S4TP66	Salmonella_phage	4.7e-186	100.0
AUM56696.1\|75836_76130_-	transcriptional regulator	Q1JS37	Enterobacteria_phage	2.7e-49	100.0
AUM56697.1\|76266_76539_+	hypothetical protein	Q1JS36	Enterobacteria_phage	1.4e-47	100.0
AUM56698.1\|76708_77209_+	replication protein B	A0A0F7LBQ6	Escherichia_phage	4.5e-92	100.0
AUM56699.1\|77272_77497_+	hypothetical protein	S4TP68	Salmonella_phage	2.3e-32	98.6
AUM56700.1\|77496_77799_+	hypothetical protein	U5N0U2	Enterobacteria_phage	2.5e-45	97.0
AUM56701.1\|77798_78023_+	hypothetical protein	A0A0F7LDG9	Escherichia_phage	8.5e-35	97.3
AUM56702.1\|78019_78295_+	hypothetical protein	U5N3W1	Enterobacteria_phage	1.6e-43	97.8
AUM56703.1\|78284_80567_+	replication protein A	A0A0F7LBQ2	Escherichia_phage	0.0e+00	98.4
AUM56704.1\|80683_82516_+	hypothetical protein	Q2P9X5	Enterobacteria_phage	4.1e-90	32.5
AUM56705.1\|82856_83891_-\|portal	phage portal protein	Q858W8	Yersinia_virus	4.2e-201	99.4
AUM56706.1\|83890_85663_-	oxidoreductase	A0A0F7LCM8	Escherichia_phage	0.0e+00	99.8
AUM56707.1\|85836_86691_+\|capsid	capsid scaffolding protein	Q94MF5	Enterobacteria_phage	2.2e-139	99.6
AUM56708.1\|86749_87823_+\|capsid	phage major capsid protein, P2 family	Q778Y7	Enterobacteria_phage	6.7e-202	100.0
AUM56709.1\|87826_88570_+\|terminase	terminase	Q94MH3	Enterobacteria_phage	3.1e-121	98.0
AUM56710.1\|88669_89179_+\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
AUM56711.1\|89178_89382_+\|tail	phage tail protein	U5N3E7	Enterobacteria_phage	4.0e-31	100.0
AUM56712.1\|89385_89667_+\|holin	holin	A0A0F7LDF8	Escherichia_phage	3.7e-43	100.0
AUM56713.1\|89666_90164_+	lysozyme	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
AUM56714.1\|90178_90604_+	protein lysA	U5N096	Enterobacteria_phage	2.8e-58	95.7
AUM56715.1\|90591_91017_+	protein lysB	U5N3W5	Enterobacteria_phage	4.7e-66	96.5
AUM56716.1\|90988_91162_+\|lysis	phage lysis protein	Q7Y4E1	Escherichia_virus	2.3e-24	96.5
AUM56717.1\|91124_91592_+\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	8.7e-82	98.7
AUM56718.1\|91584_92037_+	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	6.3e-77	100.0
AUM56719.1\|92103_92739_+\|plate	baseplate assembly protein	U5N3F0	Enterobacteria_phage	9.0e-114	99.1
AUM56720.1\|92735_93083_+\|plate	baseplate assembly protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
AUM56721.1\|93087_93996_+\|plate	baseplate assembly protein	Q858V6	Yersinia_virus	8.8e-163	100.0
AUM56722.1\|93988_94540_+\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	1.5e-104	99.5
AUM56723.1\|94596_96159_+	hypothetical protein	A0A1S6KZZ8	Salmonella_phage	1.5e-154	49.4
AUM56724.1\|96161_96695_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	5.7e-77	80.3
AUM56725.1\|96699_97287_-\|tail	phage tail protein	A0A1S6KZY8	Salmonella_phage	5.1e-95	83.6
AUM56798.1\|97286_97775_-\|tail	phage tail protein	A0A1S6KZZ0	Salmonella_phage	2.1e-70	82.6
AUM56726.1\|97994_98588_+	DNA-invertase	A0A0F7LA37	Escherichia_phage	1.8e-103	97.0
AUM56727.1\|98647_99838_+\|tail	phage tail protein	A0A0F7LBW9	Escherichia_phage	4.8e-225	99.5
AUM56728.1\|99850_100369_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
AUM56729.1\|100425_100701_+	hypothetical protein	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
AUM56730.1\|100733_100853_+\|tail	phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
AUM56731.1\|100845_103293_+\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	0.0e+00	94.8
AUM56732.1\|103307_103787_+\|tail	phage tail protein	O64315	Escherichia_phage	1.5e-84	99.4
AUM56733.1\|103786_104950_+	hypothetical protein	U5N3V4	Enterobacteria_phage	7.0e-205	99.2
AUM56734.1\|104995_105250_+	transcriptional regulator	M1SNR2	Escherichia_phage	1.3e-44	100.0
AUM56735.1\|105486_106389_+	cation-efflux pump FieF	NA	NA	NA	NA
105362:105408	attR	NA	NA	NA	NA
AUM56736.1\|106573_107536_+	ATP-dependent 6-phosphofructokinase	H8ZJH0	Ostreococcus_tauri_virus	8.8e-12	29.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP019202

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP019203

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection