CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP020817	Enterobacter sp. Crenshaw chromosome, complete genome	4 crisprs	csa3,WYL,DEDDh,DinG,cas3	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP020817_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020817_1

295508-295654

Orphan

Consensus_repeat	Method
TGTTTTCTCCCTCTCCCCGTGGGAGAGGGTCGGGGTGAGGGCACCAGACCGCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP020817_1

>merge|CP020817|1|295508-295654|CRISPRCasFinder
TGTTTTCTCCCTCTCCCCGTGGGAGAGGGTCGGGGTGAGGGCACCAGACCGCACGAGGAAAAGCACAAAGGCAACGCAAGTTGCCTTTTTTAATGTTTTCTCCCTCTCCCCGTGGGAGAGGGTCGGGGTGAGGGCACCAGACCGCAC

>CP020817|1|1|295508-295654|CRISPRCasFinder
TGTTTTCTCCCTCTCCCCGTGGGAGAGGGTCGGGGTGAGGGCACCAGACCGCAC	GAGGAAAAGCACAAAGGCAACGCAAGTTGCCTTTTTTAA
TGTTTTCTCCCTCTCCCCGTGGGAGAGGGTCGGGGTGAGGGCACCAGACCGCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP020817.1\|AUM01883.1\|286091_286949_+\|RNA-polymerase-sigma-factor-RpoH	unknown	unknown	gnl\|CDD\|235838
CP020817.1\|AUM01887.1\|290320_290482_+\|DUF4753-domain-containing-protein	unknown	unknown	unknown
CP020817.1\|AUM01886.1\|289826_290210_-\|aspartate-1-decarboxylase-autocleavage-activator-PanM	unknown	unknown	gnl\|CDD\|380212
CP020817.1\|AUM01900.1\|303890_304928_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|182305
CP020817.1\|AUM01888.1\|290634_291744_+\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|237959
CP020817.1\|AUM01891.1\|293987_294755_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183080
CP020817.1\|AUM01897.1\|300062_300809_+\|glycerophosphoryl-diester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236524
CP020817.1\|AUM01895.1\|298148_298994_+\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|182875
CP020817.1\|AUM01894.1\|297264_298152_+\|glycerol-3-phosphate-transporter-permease	unknown	unknown	gnl\|CDD\|182550
CP020817.1\|AUM01890.1\|292713_293991_+\|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivM	unknown	unknown	gnl\|CDD\|236896
CP020817.1\|AUM01893.1\|295822_297139_+\|sn-glycerol-3-phosphate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182876
CP020817.1\|AUM01884.1\|287085_288351_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180690
CP020817.1\|AUM01896.1\|298995_300066_+\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
CP020817.1\|AUM05811.1\|301296_303039_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|181992
CP020817.1\|AUM01898.1\|300792_301170_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182398
CP020817.1\|AUM01889.1\|291790_292717_+\|branched-chain-amino-acid-ABC-transporter-permease-LivH	unknown	unknown	gnl\|CDD\|182689
CP020817.1\|AUM01885.1\|288533_289649_+\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|237959
CP020817.1\|AUM01901.1\|305050_305746_+\|quercetin-2,3-dioxygenase	unknown	unknown	gnl\|CDD\|224655
CP020817.1\|AUM01892.1\|294756_295470_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183231
CP020817.1\|AUM01899.1\|303145_303634_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|182263

Protein	Function_ID	Function_description	E-value
CP020817.1\|AUM01883.1\|286091_286949_+\|RNA-polymerase-sigma-factor-RpoH	gnl\|CDD\|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	0
CP020817.1\|AUM01893.1\|295822_297139_+\|sn-glycerol-3-phosphate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182876	PRK10974, PRK10974, sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB.	0
CP020817.1\|AUM01885.1\|288533_289649_+\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|237959	PRK15404, PRK15404, high-affinity branched-chain amino acid ABC transporter substrate-binding protein.	0
CP020817.1\|AUM01900.1\|303890_304928_+\|oxidoreductase	gnl\|CDD\|182305	PRK10206, PRK10206, putative oxidoreductase; Provisional.	0
CP020817.1\|AUM01888.1\|290634_291744_+\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|237959	PRK15404, PRK15404, high-affinity branched-chain amino acid ABC transporter substrate-binding protein.	0
CP020817.1\|AUM01891.1\|293987_294755_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|183080	PRK11300, livG, leucine/isoleucine/valine transporter ATP-binding subunit; Provisional.	0
CP020817.1\|AUM01897.1\|300062_300809_+\|glycerophosphoryl-diester-phosphodiesterase	gnl\|CDD\|236524	PRK09454, ugpQ, cytoplasmic glycerophosphodiester phosphodiesterase; Provisional.	2.63696e-170
CP020817.1\|AUM01895.1\|298148_298994_+\|glycerol-3-phosphate-transporter	gnl\|CDD\|182875	PRK10973, PRK10973, sn-glycerol-3-phosphate ABC transporter permease UgpE.	0
CP020817.1\|AUM01894.1\|297264_298152_+\|glycerol-3-phosphate-transporter-permease	gnl\|CDD\|182550	PRK10561, PRK10561, sn-glycerol-3-phosphate ABC transporter permease UgpA.	0
CP020817.1\|AUM01890.1\|292713_293991_+\|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivM	gnl\|CDD\|236896	PRK11301, livM, leucine/isoleucine/valine transporter permease subunit; Provisional.	0
CP020817.1\|AUM01898.1\|300792_301170_-\|hypothetical-protein	gnl\|CDD\|182398	PRK10350, PRK10350, DUF2756 family protein.	2.42543e-23
CP020817.1\|AUM01884.1\|287085_288351_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180690	PRK06777, PRK06777, 4-aminobutyrate--2-oxoglutarate transaminase.	0
CP020817.1\|AUM01896.1\|298995_300066_+\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
CP020817.1\|AUM05811.1\|301296_303039_+\|gamma-glutamyltransferase	gnl\|CDD\|181992	PRK09615, ggt, gamma-glutamyltranspeptidase; Reviewed.	0
CP020817.1\|AUM01889.1\|291790_292717_+\|branched-chain-amino-acid-ABC-transporter-permease-LivH	gnl\|CDD\|182689	PRK10740, PRK10740, high-affinity branched-chain amino acid ABC transporter permease LivH.	0
CP020817.1\|AUM01886.1\|289826_290210_-\|aspartate-1-decarboxylase-autocleavage-activator-PanM	gnl\|CDD\|380212	NF033213, matur_PanM, aspartate 1-decarboxylase autocleavage activator PanM. Members of this family, called PanM (or PanZ), although related to the GNAT family N-acetyltransferases, have a different function. Then enzyme PanD, aspartate 1-decarboxylase, has an active site modified Ser residue, created by cleavage of a precursor form. PanM promotes the maturation of the CoA biosynthesis enzyme PanD, but also inhibits its activity in the presence of CoA. Figure 6 in PMID:26276430 identifies residues considered critical to interaction with PanD; seed alignment sequences and cutoff scores were chosen to separate proposed PanM from functionally distinct relatives.	1.54683e-80
CP020817.1\|AUM01901.1\|305050_305746_+\|quercetin-2,3-dioxygenase	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	3.05333e-83
CP020817.1\|AUM01892.1\|294756_295470_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|183231	PRK11614, livF, high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF.	1.04133e-169
CP020817.1\|AUM01899.1\|303145_303634_-\|N-acetyltransferase	gnl\|CDD\|182263	PRK10140, PRK10140, N-acetyltransferase.	1.74485e-118

>CP020817.1|AUM01892.1|294756_295470_+|ABC-transporter-ATP-binding-protein
MEKAMLTFDKVNAHYGKIQALHDVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTARIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAHRDEYQTRIKWVYELFPRLWERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRKEGMTIFLVEQNANQALKLADRGYVLENGRVVLEDTGDALLANEAVRSAYLGG
>CP020817.1|AUM01891.1|293987_294755_+|ABC-transporter-ATP-binding-protein
MSQPLLSVNGLMMRFGGLLAVNNVNLDLHKKEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTIMLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAQDEALDRAATWLDRIGLLQHANRQASNLAYGDQRRLEIVRCMVTQPEILMLDEPAAGLNPKETKELDELIAELRDSHDTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEEIRNNPDVIRAYLGEA
>CP020817.1|AUM01890.1|292713_293991_+|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivM
MKPMHFAMALLSAAMFFVLASVFMGVQLELNGTKLVVDTAADIRWQWVFIGTAVVFLFQLLRPLFQKTLKNVSGPKFVLPAIDGSTVKQKLFLVALLVAAVAWPFVVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEVTGGPNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGVKYDPSDRVIWLYLVALLLVVITLFVINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLKNGQAKGEQA
>CP020817.1|AUM01889.1|291790_292717_+|branched-chain-amino-acid-ABC-transporter-permease-LivH
MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWLLVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWIVGASENFAASITTMQLVIWVVTFIAMLALTLFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSFALLILVLLVMPTGILGRPEVEKV
>CP020817.1|AUM01888.1|290634_291744_+|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein
MKRNAKTLIAGMVALSISHAAMADDIKVAVVGAMSGPVAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIQYVIGHLCSSSTQPASDIYEDEGILMITPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKKGGANIVFFDGITAGEKDFSALIARLQKENIDFVYYGGYYPEMGQMLRQARATGLKTQFMGPEGVGNASLSNIAGDSAEGMLVTMPKRYDQDPANKAIVDALKAQKKDPSGPYVWITYAAVQSLATALDRSGSKEPLDLVKDLKAHGANTVIGPLNWDEKGDLKGFEFGVFKWHADGSSSAAK
>CP020817.1|AUM01887.1|290320_290482_+|DUF4753-domain-containing-protein
MGSLKTHGSKNKQNFNLNGSDLFGALYRYFMLQTALLFVYLCLISEYYLCLIA
>CP020817.1|AUM01886.1|289826_290210_-|aspartate-1-decarboxylase-autocleavage-activator-PanM
MKLTIVRLVTFSDQDHIDLGKIWPEYSPSSLRVDETHRIYAARFNERLLAAVRVTLSGTEGALDSLRVRDVTRRRGVGQYLIEEVIRENPSVTSWWMADVGVENRGVMAAFMQALGFTAQESGWEKR
>CP020817.1|AUM01885.1|288533_289649_+|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein
MGNLRMNMKGKALLAGCIALAFSTMAQADIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGEKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYKLTLRTTGLDSDQGPTAAKYIVEKVKPKRIAIVHDKQQYGEGLARSVQDNLKKANADVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSADPAEIATWLKANTVETVMGPLSWDAKGDLKGFEFGVFDWHANGTATDAK
>CP020817.1|AUM01884.1|287085_288351_+|aspartate-aminotransferase-family-protein
MKNNELNDRRLQATPRGIGVMCNFYADKAENATVWDVEGNEYIDFAAGIAVLNTGHRHPKVISAIEKQLHAFTHTAYQIVPYEGYVALAERINQRVPVDGPAKTAFFSTGAEAVENAVKIARAYTKRPGLITFGGAFHGRTFMTMALTGKVAPYKLGFGPFPGSVYHAQYPNELHGVSTAEALKSLERIFKADIAPDQVAAIILEPVQGEGGFNIAPADFMQALRALCDTHGILLIADEVQSGFARTGKLFSMEHHCVKPDLITMAKSLAGGMPLSAVSGRAEVMDAPAPGGLGGTYAGNPLAIAAAHAVLDVIDEEDLCTRSAHLGHHLVEVLNKAKEHCPYIADIRAQGSMVAVEFNDPQTGQPSPEFTRQVQERALQEGLLLLSCGVYGNVIRFLYPLTIPEAQFRKALDIISASLTR
>CP020817.1|AUM01883.1|286091_286949_+|RNA-polymerase-sigma-factor-RpoH
MTKEMQTLALAPVGNLESYIRAANTWPMLTAEEEKELAEKLHYQGDLEAAKKLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKAKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDMTFDMSSDDDASDSQPMAPVLYLQDKTSNFADGIEEDNWEDQAANKLTHAMEGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
>CP020817.1|AUM01893.1|295822_297139_+|sn-glycerol-3-phosphate-ABC-transporter-substrate-binding-protein
MTSLRHTALGLALGLAFATNAMAVTTIPFWHSMEGELGKEVDSLAQRFNDTHPDYKIVPVYKGNYEQSLSAGIAAFRTGNAPALLQVYEVGTATMMASKAIKPVYEVFKEAGINFDESQFVPTVAGYYTDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQDLAEYTAKLKAAGMKCGYASGWQGWIQIENFSAWHGLPVATKNNGFDGTDAVLEFNKPEQVKHIALLADLNKKGDFSYFGRKDESTEKFYNGDCAITTASSGSLADIRHYAKFNYGVGMMPYDADVKGAPQNAIIGGASLWVMQGKDKGTYKGVAEFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQGFYSKNPGADIATRQMLNKPPLPFTKGLRLGNMPQIRTIVDEELESVWTGKKTPQQALDSAVERGNQLLRRFEQSTKS
>CP020817.1|AUM01894.1|297264_298152_+|glycerol-3-phosphate-transporter-permease
MSSSRPVFRSRWLPYLLVAPQLVITVIFFIWPAGEALWYSVQSVDPFGLSSQFVGLDNFTALFHDSYYLDSFWTTMKFSALVTVSGLVASLFFAALVDYVVRGSRIYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFFAALQSIPRSLVEAAAIDGAGPIRRFFRLSLPLIAPVSFFLLVVNLVYAFFDTFPVIDAATAGGPVQATTTLIYKIYREGFAGLDLSASAAQSVVLMFLVIILTVVQFRYVESKVRYQ
>CP020817.1|AUM01895.1|298148_298994_+|glycerol-3-phosphate-transporter
MIENRRGLTIFSHTMLILGIIVILFPLYVAFVAATLDTKAVFDTPMTLIPGGHLFENMKTIWTQGVGANSAPFWLMMLNSFIMAFGITVGKITVSMLSAFAIVWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLKLLDSYAGLTLPLMASATATFLFRQFFMTLPDELIEAARIDGASPMRFFRDIVLPLSKTNLAALFVITFIYGWNQYLWPLLIIQDVNLGTAVAGIKGMIATGEGTTLWNQVMAAMLLTLIPPVVIVLAMQRAFVRGLVDSEK
>CP020817.1|AUM01896.1|298995_300066_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MAGLKLQAVTKSWDGKTQVIQPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTSGDIWIDRQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKGHIDERVKEAARILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQLHRRLKTTSLYVTHDQVEAMTLAQRVMVMNKGIAEQIGTPVEVYEKPATRFVASFIGSPAMNLLEGRISSAGTHFELESGMALPINWYYRGYAGRKMTLGIRPEHIVLTSQADGGVPLVMDTLEMLGADNLAHGRWGEQKMVVRLPHQERPKAGSTLWLHLPENHLHLFDGETGQRV
>CP020817.1|AUM01897.1|300062_300809_+|glycerophosphoryl-diester-phosphodiesterase
MSNWPYPHVVAHRGGGKLAPENTLAAIDVGARYGHTMIEFDAKLSKDGEIFLLHDDNLERTSNGWGVAGELPWRDLLKVDAGSWYSGEFKGEPLPLLADVADRCRQHGMMANIEIKPTTGTGPLTGKVIALAARELWEGMTAPLLSSFEIDALEAAQAVVPELPRGLLLDEWREDWRELTTRLACVSIHLNHRLLDEARVKMLKDAGLHILVYTVNKPQRAAELLRWGVDSICTDAIDLIGPDFSSAD
>CP020817.1|AUM01898.1|300792_301170_-|hypothetical-protein
MKRLWILTALIPFAALAQPLNTMNNPNQQGYVIPSQQRMQTEMMSQQQQQKGMLNQQLKTQTQMQQQSLQNQMNANTQRVQQGQVREQPLPNKNGGMLGGMTSSGSGQQHMLPPQSNGSMLNPQN
>CP020817.1|AUM05811.1|301296_303039_+|gamma-glutamyltransferase
MKPTFLRWVAIAALMAGGTFSVAANPPAAPPVSYGVEEDVFHPVRATHGMVASVDALATKVGVDILRQGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMMLRTKDGKTTAIDFREMAPSQASRDMFLDDQGNPDSKKSLTSHLATGTPGTVAGFSLALEKYGTMPLNKVVQPAIKLARDGFVVNDALADDLKTYGSEVIPNHENSKAIFWKDGEPLKKGDRLVQKNLAKSLELIAEHGPDAFYKGAIADQIAEEMQKNGGLITKADLAEYKAVEREPISGTYRGYEVFSMPPPSSGGIHIVQILNILENFDMHKFGFGSADAMQVMAEAEKRAYADRSEYLGDPDFVKVPWQALTNKAYAKSIADQIDINKAKPSSEIRPGKLAPYESNQTTHFSVVDKDGNAVAVTYTLNTTFGTGIVAGNSGILLNNEMDDFSAKPGVPNVYGLVGGDANAVGPKKRPLSSMSPTIVVKDGKTWLVTGSPGGSRIITTVLQMVVNSIDFGMNVAEATNAPRFHHQWLPDELRVEKGFSPDTIKLLEQRGQKVAVKEAMGSTQSIMVGPDGALFGASDPRSVDDLSAGY
>CP020817.1|AUM01899.1|303145_303634_-|N-acetyltransferase
MSEIVIRHAEPKDYDAIRQIHAQPEVYHNTLQVPHPSEQMWQERLSDQPGIKQLVACIEGHVAGHLCIVVAQRPRRSHVADFGICVGAQWQNRGVASALMRTMIDMCDNWLRVDRIELTVFVDNEPAIAVYKKHGFEIEGTGKRYALRNGEYVDAYYMARMK
>CP020817.1|AUM01900.1|303890_304928_+|oxidoreductase
MTLHCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRRAKPEEQSPQYSHIHFTSDLDEVLNDPQVKLVVVCTHADSHFDYAKRALEAGKNVLVEKPFTPTIAEAKALFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGDIVEIESHFDYYRPVAETQPGLPQDGSFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGDLKAIVKTSHLVKIDYPKFIVHGTKGSFVKYGIDQQETSLKANIMPGEPGFAADNSVGVLEYVNDEGVTVREELKPETGDYGRVYDALYETLTTGTPNYVKESDVLTNLEILERAFEQASPATVTLAK
>CP020817.1|AUM01901.1|305050_305746_+|quercetin-2,3-dioxygenase
MIYLRKANERGHANHGWLDSWHSFSFADYYDPNFMGFSALRVINDDVIDAGQGFGTHPHKDMEILTYVLEGAVEHQDSMGNKEQVPAGEFQIMSAGTGVRHSEYNPSKTEKLHLYQIWIIPEETGITPRYEQRRFDAKQGKQLVLSPDAREGSLKVHQDMELYRWALAKDEQSVHQIAANRRVWIQVVKGEVSINGTKATTADGLAVWDEQALSVHADSESEILLFDLPPV

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Crispr_ID: CP020817_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020817_2

964044-964153

Orphan

Consensus_repeat	Method
CCCTCTCCCTGTGGGAGAGGGCCAGGGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP020817_2

>merge|CP020817|2|964044-964153|CRISPRCasFinder
CCCTCTCCCTGTGGGAGAGGGCCAGGGTGGGGCAAGGTAAAAGCAAAACAGCAACGCAAGTTGCTGTTTTTGATGTTTTTACCCTCTCCCTGTGGGAGAGGGCTAGGGTG

>CP020817|2|2|964044-964153|CRISPRCasFinder
CCCTCTCCCTGTGGGAGAGGGCCAGGGTG	GGGCAAGGTAAAAGCAAAACAGCAACGCAAGTTGCTGTTTTTGATGTTTTTA
CCCTCTCCCTGTGGGAGAGGGCTAGGGTG

Protein	Signature genes	Signature genes Name	Protein_function
CP020817.1\|AUM02486.1\|974032_975850_+\|alpha-glycosidase	unknown	unknown	gnl\|CDD\|236759
CP020817.1\|AUM02481.1\|967309_968515_-\|exonuclease-sbcCD-subunit-D	unknown	unknown	gnl\|CDD\|182871
CP020817.1\|AUM02489.1\|979979_980582_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|184962
CP020817.1\|AUM02487.1\|975938_978554_+\|beta-carotene-15,15'-monooxygenase	unknown	unknown	gnl\|CDD\|378390
CP020817.1\|AUM02472.1\|958489_959299_-\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
CP020817.1\|AUM02479.1\|963119_964025_+\|fructokinase	unknown	unknown	gnl\|CDD\|236565
CP020817.1\|AUM02482.1\|968702_969392_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|182277
CP020817.1\|AUM02470.1\|956948_957269_+\|phosphate-starvation-inducible-protein-PsiF	unknown	unknown	gnl\|CDD\|183165
CP020817.1\|AUM02483.1\|969413_970709_+\|PAS-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|182895
CP020817.1\|AUM02484.1\|971118_972438_+\|branched-chain-amino-acid-transport-system-II-carrier-protein	unknown	unknown	gnl\|CDD\|185331
CP020817.1\|AUM02488.1\|978550_979936_+\|DUF3999-domain-containing-protein	unknown	unknown	gnl\|CDD\|372507
CP020817.1\|AUM02476.1\|960996_961674_+\|AroM-protein	unknown	unknown	gnl\|CDD\|182491
CP020817.1\|AUM02478.1\|962081_962996_-\|recombination-associated-protein-RdgC	unknown	unknown	gnl\|CDD\|234726
CP020817.1\|AUM02474.1\|959998_960523_+\|shikimate-kinase-II	unknown	unknown	gnl\|CDD\|235153
CP020817.1\|AUM02485.1\|972519_973893_+\|proline-specific-permease-ProY	unknown	unknown	gnl\|CDD\|182566
CP020817.1\|AUM02477.1\|961745_962033_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182565
CP020817.1\|AUM02473.1\|959396_959855_+\|DUF188-domain-containing-protein	unknown	unknown	gnl\|CDD\|178882
CP020817.1\|AUM02471.1\|957371_958475_+\|diguanylate-cyclase-AdrA	unknown	unknown	gnl\|CDD\|182329
CP020817.1\|AUM02475.1\|960567_960759_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182421
CP020817.1\|AUM02480.1\|964181_967313_-\|exonuclease-subunit-SbcC	unknown	unknown	gnl\|CDD\|182330

Protein	Function_ID	Function_description	E-value
CP020817.1\|AUM02486.1\|974032_975850_+\|alpha-glycosidase	gnl\|CDD\|236759	PRK10785, PRK10785, maltodextrin glucosidase; Provisional.	0
CP020817.1\|AUM02481.1\|967309_968515_-\|exonuclease-sbcCD-subunit-D	gnl\|CDD\|182871	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional.	0
CP020817.1\|AUM02489.1\|979979_980582_-\|peroxiredoxin	gnl\|CDD\|184962	PRK15000, PRK15000, peroxiredoxin C.	5.99401e-148
CP020817.1\|AUM02487.1\|975938_978554_+\|beta-carotene-15,15'-monooxygenase	gnl\|CDD\|378390	pfam10101, DUF2339, Predicted membrane protein (DUF2339). This domain, found in various hypothetical bacterial proteins, has no known function.	1.7381e-79
CP020817.1\|AUM02472.1\|958489_959299_-\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	3.29273e-130
CP020817.1\|AUM02479.1\|963119_964025_+\|fructokinase	gnl\|CDD\|236565	PRK09557, PRK09557, fructokinase; Reviewed.	0
CP020817.1\|AUM02482.1\|968702_969392_+\|DNA-binding-response-regulator	gnl\|CDD\|182277	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB.	4.34777e-162
CP020817.1\|AUM02470.1\|956948_957269_+\|phosphate-starvation-inducible-protein-PsiF	gnl\|CDD\|183165	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF.	5.90126e-44
CP020817.1\|AUM02483.1\|969413_970709_+\|PAS-domain-containing-sensor-histidine-kinase	gnl\|CDD\|182895	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR.	0
CP020817.1\|AUM02484.1\|971118_972438_+\|branched-chain-amino-acid-transport-system-II-carrier-protein	gnl\|CDD\|185331	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ.	0
CP020817.1\|AUM02488.1\|978550_979936_+\|DUF3999-domain-containing-protein	gnl\|CDD\|372507	pfam13163, DUF3999, Protein of unknown function (DUF3999). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 440 and 470 amino acids in length. There is a single completely conserved residue D that may be functionally important.	4.758e-78
CP020817.1\|AUM02476.1\|960996_961674_+\|AroM-protein	gnl\|CDD\|182491	PRK10481, PRK10481, hypothetical protein; Provisional.	4.5945e-122
CP020817.1\|AUM02478.1\|962081_962996_-\|recombination-associated-protein-RdgC	gnl\|CDD\|234726	PRK00321, rdgC, recombination associated protein; Reviewed.	0
CP020817.1\|AUM02474.1\|959998_960523_+\|shikimate-kinase-II	gnl\|CDD\|235153	PRK03731, aroL, shikimate kinase AroL.	2.05968e-105
CP020817.1\|AUM02485.1\|972519_973893_+\|proline-specific-permease-ProY	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
CP020817.1\|AUM02477.1\|961745_962033_+\|hypothetical-protein	gnl\|CDD\|182565	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase.	5.75461e-64
CP020817.1\|AUM02473.1\|959396_959855_+\|DUF188-domain-containing-protein	gnl\|CDD\|178882	PRK00124, PRK00124, YaiI/YqxD family protein.	2.14373e-76
CP020817.1\|AUM02471.1\|957371_958475_+\|diguanylate-cyclase-AdrA	gnl\|CDD\|182329	PRK10245, adrA, diguanylate cyclase AdrA; Provisional.	0
CP020817.1\|AUM02475.1\|960567_960759_+\|hypothetical-protein	gnl\|CDD\|182421	PRK10380, PRK10380, hypothetical protein; Provisional.	7.08366e-31
CP020817.1\|AUM02480.1\|964181_967313_-\|exonuclease-subunit-SbcC	gnl\|CDD\|182330	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional.	0

>CP020817.1|AUM02479.1|963119_964025_+|fructokinase
MRIGIDLGGTKTEVIALSEQGEQLFRHRLPTPRDDYHQTIETIASLVEMAEQATGQTGSVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSQRLNREVRLANDANCLAVSEAIDGAAAGAQTVFAVIIGTGCGAGVAFGGRAHIGGNGTAGEWGHNPLPWMDEDELKYRAEVPCYCGKQGCIETFISGTGFATDYHRLSGQPLKGNEIMRLVEEQDPVAELALSRYEMRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYATVPNLVKQWVFGGECETPIRKAVHGDSSGVRGAAWLWPE
>CP020817.1|AUM02478.1|962081_962996_-|recombination-associated-protein-RdgC
MLWFKNLMVYRLSRDVSLRAEEMEKQLAAYTFSPCGSQDMAKTGWVPPMGSQSDALTHASSTGQIIVCARKEEKILPTPVVKQALEAKIFKLEAEQGRKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSIGSLPVVPLALETPIELTLTEWVRSGAAAQGFQILDEAELKALLEDGGVIRAKKQDLVSDEIAVHIEAGKVVTKLALDWQQRIQFVMCDDGSVKRLKFCDELRDQNEDIDREDYAQRFDADFILMTGELAALIQNLVEGLGGEAQR
>CP020817.1|AUM02477.1|961745_962033_+|hypothetical-protein
MLQSNEYFSGKVKSIGFTSSSTGRASVGVMAEGEYTFGTAEAEEMTVVSGALNVLLPGETEWKVYAAGQVFNVPGHSEFHLQVAEPTSYLCRYLK
>CP020817.1|AUM02476.1|960996_961674_+|AroM-protein
MKATLAILTIGVVPVSEVLPLLTEHVSEQQITHLSLLGKMSREEVMEDYAVEAGEDPLATLLSDGKLAHVSRQKIERSLQGVIEVLDNQGYDVILLMSTAPIKGLTARNAILLEPMRIIPPLVASIVDGHQVGVIVPIEELMDNQEAKWHVLEKVPLYALANPFWDSEAKLIAAGKELLERGADVLILDCLGFHQHHRDLLQKALDVPVLLSNVLMARLASELLM
>CP020817.1|AUM02475.1|960567_960759_+|hypothetical-protein
MPTRPPYPREARIVTVEKGQTGHTVTWYQLRADHPKPDSLISEHETEQEALDAKRRYEDPDKT
>CP020817.1|AUM02474.1|959998_960523_+|shikimate-kinase-II
MTQPIFLVGPRGCGKTTVGLELARVCHRQFVDTDHWLQTEAGKTIAEIVEQEGWESFRARETAALKAVTTPSAVIATGGGIVLAECNRHFMREKGIVIYLSAPVSALVGRLEAFPEEGQRPALTSRPLNEEVSEVLAERDALYREAAHHVVDASASPEDVVIQIITALRLACAS
>CP020817.1|AUM02473.1|959396_959855_+|DUF188-domain-containing-protein
MAIWVDADACPNVIKEILFRAAERVQMPLTLVANQNIRVPPSRFIRSLRVPAGFDVADNEIVRLCRAEDLVITADIPLAAEVLEKGAAALNPRGERYSPSTIREKLTMRDFMDTMRASGVQTGGPDSLSQRDRQQFAAELDKWLLEVKRRTA
>CP020817.1|AUM02472.1|958489_959299_-|pyrroline-5-carboxylate-reductase
MDKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAELRDQYGINAAESAQEVAQVADIVFGAVKPNIMIKVLSDITSSLNKETLVVSIAAGVTLDQLARALGHDRKIVRAMPNTPSLVNAGMTSVTPNALVTTEEVADVLNIFRCFGEAEVIAESMIHPVVGVSGSAPAYVFMFLEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGKHPGELKDMVCSPGGTTIEAVRVLEERGFRSAVIEAMAKCMEKSEKLSKS
>CP020817.1|AUM02471.1|957371_958475_+|diguanylate-cyclase-AdrA
MMNDETYYNKKRIREEWNLTLSQDDPHRAGIQFARRVRLARAVGLAAMFFPVAGMLVTHFLPGGWWLLLVGWSFVWPHFAWQLSCRAASPHQQEIFNLKIDAIIAGLWIGVMGMNALPTAALVMMVGMNMMGSGGCRLFIPGIALTLLSALVTLPLVGKVAVFNPDLVEWGLTLPVLVLYPMLFAWLSHRTAVRLAEHKQRLEMMSTRDGMTGVFNRRHWEMLLRNEFEHCRRDHSTATILLIDIDHFKNINDTWGHDVGDEAIIAITRQLQRSVRSGDAIGRFGGDEFAVIMSQTAAESAIAVMSRLHERLEKLTLPCAPKEALRISVGVAPWGPQFGHYREWLKAADVALYRAKNAGRGRTEVAA
>CP020817.1|AUM02470.1|956948_957269_+|phosphate-starvation-inducible-protein-PsiF
MKTTLLVTLLSGLFLVASANAEEKTLTPQQQRMTTCNQQATSQSLKGDARKTYMSDCLKNGAAKPAEKSLTPQQQKMRECNAKATEQSLKGDDRSKFMSACLKKKV
>CP020817.1|AUM02480.1|964181_967313_-|exonuclease-subunit-SbcC
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPRLQKVSQAQNDLMTRDTAECLAEVEFEVKGTAYRAFWSQNRARNQPDGNLQAPRVELARCEDGKILADKVTDKLEQTAALTGLDYGRFTRSMLLSQGQFAAFLNARPSDRAELLEELTGTEIYGQISAMVFEKHKAARSVLEKCEAQAAGVVLLSEEQQQQLQQSLQALTDEEKTLLVQQQSQQKDFQWLTRHDELVLEQQRVAAMQQQAQQALTNAAPELAKLQLALPAAQLRPLWEHQQEQTARLTQTQQRIVEVNTRLQAKTALRARIRHTAQRNHEQLQTELKALAQWLVEHERYRLLGQEIAGWRAQFSQLNRDKTQLASLAARMGELRNRLAEMPENALTLTADEVSAAMEQQSRSRTLRQRLTSLHARYQPLQKRLRQSGESVQKAQADQNKLNETLTLRRQQYKEKHQHFLDLKALCEREATIKDLESYRSRLEAGKPCPLCGSSEHPAVAQYQSLELTDNQRRRDALEKEVAALKEEGLLVLGQVNALTQQIQRETDEAQMLSQEEQALTKEWMEACTSLNIALNIQEDITPWMNEQEQYERQLYQLSQRLTLQNQLNEQEVQERQYQQQLTAARQALENTLLSLSLNVPEDGNEAAWLHAREAEFAQWQEKQTQHGVLLERINALKPLLDTLPETNGEEAEPAIPDGWRDVHDECVSLQSQLSAQQQQEKLEQERLQQSQTQFTTALAASCFADRDAFLAALLDDDAIRHLVQLKQSLESQIQQAAALSGQANQQLQAHLSLRPEGLNADAPALQSQLQQLAERLRENTTHQGEIRQQLKQDSDNRQHQLALMQQIEEAARQADDWGYLNALIGSSTGDKFRKFAQGLTLDNLVWLANQQLNRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMKERIPVQIKVKKINGLGYSRLDKEFAVE
>CP020817.1|AUM02481.1|967309_968515_-|exonuclease-sbcCD-subunit-D
MRILHTSDWHLGQNFYSKSRAAEHEAFLNWLLETARTHEVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCHLVIVAGNHDSVATLNESRDILAFLNTTVVASAGHAPQILKKRDGTPGAVLCPIPFLRPRDIVQSQAGLSGAEKQQHLLQAITDYYHQQHADACALRGDQPIPVIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIVGGSEHIRYCGSPISLSFDETGKAKSVHLVSFSDGKLHAVETLEVPVTQPLAVLKGDLAAITAQLEQWRGTALNPPVWLDIEITTDDYLHDMQRKIQALTEDLPVEVLLVRRSREQREKILLSAQRETLSELRVEEVFERRLSQEEIDDAKRARLSELFSHTLHALNDEEENA
>CP020817.1|AUM02482.1|968702_969392_+|DNA-binding-response-regulator
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGLQFIKHLKREALTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMTGENPLDMGPTEFKLLHFFMTHPERVYSREQLLNNVWGTNVYVEDRTVDVHIRRLRKALELSGHDRMVQTVRGTGYRFSTRF
>CP020817.1|AUM02483.1|969413_970709_+|PAS-domain-containing-sensor-histidine-kinase
MLERLSWKRLVFELILCCIPAFLLGAFLGHLPWFLLASVTGLLIWHFWNLLRLSWWLWVDRSMTPPPGSGSWEPLLYGLHQMQMRNKKRRRELGSLIKRFRSGAESLPDAVILTTEEGTIFWCNGLAQQLLGLRWPDDNGQNILNLLRYPEFTLYLKKRDFTRPHNLKLNNGRHLEIRVMPYSDKQWLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMQEQTLEGAPREKALHTMREQTHRMEGLVKQLLTLSKIEAAPTLALNETIDVPMMLRVVEREAQTLSHKKHHLTFEVDNTLKVLGSEDELRSAISNLVYNAVNHTPEGTNIVVRWHHAPTGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLDIQSTLGKGTRFSFVIPERLIAKKIA
>CP020817.1|AUM02484.1|971118_972438_+|branched-chain-amino-acid-transport-system-II-carrier-protein
MTHHLKSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDGAMPLFIYSLIYFAIVILVSLYPGKLLDTVGNFLAPLKIVALIVLAVAAIVWPAGPISDAMDAYKNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTIWAGLMAGVGLTLLYLALFRLGSDSAMLVDQNANGAAILHAYVQHTFGGAGSMLLAALIFLACLVTAVGLTCACAEFFAQYLPLSYRTLVFILGIFSMAVSNLGLSHLIQVSIPVLTAIYPPCIVLVVLSFTRPWWNNSSRIIAPAMFISLIFGILDGIKASAFAHILPAWTQRLPLSEQGLAWLMPTVVALVLAIIWDRAAGRQVASNAH
>CP020817.1|AUM02485.1|972519_973893_+|proline-specific-permease-ProY
MESTNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPSASSFSRYAQENLGPLAGFITGWTYCFEILIVAIADVTAFGIYMGVWFPAVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGIAFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKVFAKTSRRGTPWVTVVVMTVALLFSVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLSPDEAKALKFKVPGGVATTVVGLIFLVFIIALIGYHPDTRISLYVGCAWIVLLLVGWVFKCRRDRQLAEAQ
>CP020817.1|AUM02486.1|974032_975850_+|alpha-glycosidase
MLNAWHLPVAPFVKQNKDNLVITLWLAGENQPERVTLRAEIDNEETGLKMHKLRSQPQPGITAWRANIDLNSGQPRRRYSFKLLWNNRQLWFTPQGFSRFPPARLEQFAVDYPDNGPQWVNDQVFYQIFPDRFARSEKRTADQDKIYHHHAAGHDIILKAWDEPLTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDEQFGGDEALLRLRKNTQNEGMRLILDGVFNHSGDSHAWFDRHNQSMGGACHNPDSPQRDWYSFNEEGRALDWLGYASLPKLDFQSPTLVNEIYGSEDSIVRHWLKAPWNMDGWRLDVVHMLGESGGARNNLQHVAGITRSAKAAQPEAFVFGEHFGDARQWLQNDAEDAAMNYRGFTFPLWGFLANTDISYDPNHIDAETCMAWMENYRAGLSHQQQLRMFNQLDSHDTARFKSLLGKDAARLPLAVTWLFTWPGVPCIYYGDEVGLDGNNDPFCRKIFPWEPEKHDKVLFSLYQRLAKLRKQSLALRYGGCQVVYAHDNVVVFARVYNQQRVLVAINRGEACEVVLDDSPLLKVAAWKNKEGKATIQDGVLALPAVSATIWFGS
>CP020817.1|AUM02487.1|975938_978554_+|beta-carotene-15,15'-monooxygenase
MDELYILGCLFLVFALVVAPVLAVIGFNRSTAARQEIARLRQRIEALEQRDVPESAPEPVQPTAPVAVTAPVVEDAPAPVDPWRSDTPAAVAEPAPAPTPAAKQPSAFGGILTSLARWFMQGNPLAKLGILLLFLGLSFLLRYTVEHSLFPLELRLVATALFAIVLLAVGWRLRHKQRVYALILQGGATGVLYLTVFGAFRLWQMLPMTLAFALLVVICAASVGLAVLQKALSLAMLASLGGYLAPLLLSTGGGSFVALFSFYLLLSIGILAISIWQHWRELNLLGLLFTFGVGGLWGLNDYQPEDYWICQLFLIANTLIFGVLSVALSLRAQEKGKQIIDGVLLFAPPLIGFGMQYGMTRHWEYGPALSALGYGAFYLTLASLALRRYPSLGRPLVMAALAIGGGFATLAIPLALSARWTAMAWALEGLGILWLGVQQHQRRMCYSGTALLVLALGSALWAQTNGVTSLSLLLIFTILSLCWLAAAWLWRTLFLPVSRALLAGGLLFWLVALLGASRLALTKELPILAGVLALTAASVWGCRQAAARLAWRELDASKWLLWPVMLLMVGYQLWHQQIVAAGWSNLAWCVALPAALMLLRRDGERLPPRIAMGLHLSLFWMILLALAAELYWFTRSLPWGMAAWGSGLAMAAGGGVIMGLSAAVRRRGWPFREWPALYACLAPIPAVVALLVLLVVTNFQDGVVYRQTWLPLVNPLEEGAAFALLGLVVFYRAVDRYYPAWLSQARPWPAVAMMAFGFWWLNGALMRALAWYGDVAWNMASLWDSRLIQTSFALFWMLSALVVMIHATRRASRQEWLCGAALLGVVMVKLMLVDSAGGGGLSRAVAFIGVAILVLIVGYFSPLPPKTGDEK
>CP020817.1|AUM02488.1|978550_979936_+|DUF3999-domain-containing-protein
MKWMKAVACTALLALSGPAFCDEGQTESPRDYAFGLSLDTSVPSQWYRVMLPLAVYEQSTSPDLHDVRVFNQSGEAVPFSLVSATRPQVPAQSTALRLFPLDASPLAASRGAGDSDKILLRSGSGVEIVLEGQKAAAAGQHYLLTLPEQATGEIAISQLQLLWNTPQTPWQGTASVYYSEDLKRWYTLREDMPLLDVVSGQDRLKLDRIDTDTVLSPDANRYLMVVLNAQSQGITLTGVNAISAPAQAAPEAIDLEGEGEQLSTSEAQWHWARPQPLSAVSLSLNGDGVLPVEIAWRSTEKDAWHPLKKEVLYRLEGKTSPPVSLNGGLVQAVKITTLNARLPEYLPSVTGHRDRYDLVFNAQGKAPYVLAWGNGAAKPASVEPGMLIPADLRKTYDMANLPQADILDDVALGGQERLTATSAAERESRMNTLLVWGVLIAGVILLAGMAWRIWRETQRKA
>CP020817.1|AUM02489.1|979979_980582_-|peroxiredoxin
MVLVTRPAPDFTAAAVLGNGEIVENFNFKQHTNGKATVLFFWPMDFTFVCPSELIAFDKRYEEFQKRGVEVVGVSFDSEFVHNAWRNTPVDKGGIGAVKYAMVADIKREIQQAYGIEHPDAGVALRGSFLIDANGIVRHQVVNDLPLGRNIDEMLRMVDALQFHEEHGEVCPAQWEKGKEGMNASPDGVAKYLSENVSSL

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Crispr_ID: CP020817_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020817_3

1032384-1032521

Orphan

Consensus_repeat	Method
CCCTCTCCCCGTGGGAGAGGGTCAGGGTGAGGGCATCAGGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP020817_3

>merge|CP020817|3|1032384-1032521|CRISPRCasFinder
CCCTCTCCCCGTGGGAGAGGGTCAGGGTGAGGGCATCAGGCCGTACAAGGCAAAAGCAAAACGGCAACCTTTGGTTGCCGTTTTTAATGTGTATCCCCTCTCCCCGTGGGAGAGGGTCAGGGTGAGGTCATCAGGCCG

>CP020817|3|3|1032384-1032521|CRISPRCasFinder
CCCTCTCCCCGTGGGAGAGGGTCAGGGTGAGGGCATCAGGCCG	TACAAGGCAAAAGCAAAACGGCAACCTTTGGTTGCCGTTTTTAATGTGTATC
CCCTCTCCCCGTGGGAGAGGGTCAGGGTGAGGTCATCAGGCCG

Protein	Signature genes	Signature genes Name	Protein_function
CP020817.1\|AUM02531.1\|1022594_1024295_-\|peptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|226909
CP020817.1\|AUM02530.1\|1021832_1022528_-\|7-cyano-7-deazaguanine-synthase	unknown	unknown	gnl\|CDD\|182967
CP020817.1\|AUM02537.1\|1030673_1031012_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|182629
CP020817.1\|AUM02532.1\|1024396_1025215_+\|thiamin-pyrimidine-pyrophosphate-hydrolase	unknown	unknown	gnl\|CDD\|185080
CP020817.1\|AUM02547.1\|1038904_1041994_+\|beta-D-galactosidase	unknown	unknown	gnl\|CDD\|236548
CP020817.1\|AUM02533.1\|1025255_1026302_-\|cysteine-synthase	unknown	unknown	gnl\|CDD\|223110
CP020817.1\|AUM02543.1\|1035237_1035453_+\|hypothetical-protein	unknown	unknown	unknown
CP020817.1\|AUM02538.1\|1031047_1032337_+\|ammonium-transporter	unknown	unknown	gnl\|CDD\|182630
CP020817.1\|AUM02544.1\|1035534_1036956_-\|DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224089
CP020817.1\|AUM02541.1\|1034150_1034462_-\|cysteine-methyltransferase	unknown	unknown	gnl\|CDD\|226219
CP020817.1\|AUM02534.1\|1026417_1026876_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
CP020817.1\|AUM02548.1\|1042033_1042861_-\|nickel/cobalt-efflux-protein-RcnA	unknown	unknown	gnl\|CDD\|236641
CP020817.1\|AUM02536.1\|1028671_1030453_+\|multidrug-ABC-transporter-permease/ATP-binding-protein	unknown	unknown	gnl\|CDD\|182733
CP020817.1\|AUM02529.1\|1021500_1021830_+\|putative-addiction-module-antidote-protein	unknown	unknown	gnl\|CDD\|226162
CP020817.1\|AUM02535.1\|1026906_1028679_+\|multidrug-ABC-transporter-permease/ATP-binding-protein	unknown	unknown	gnl\|CDD\|182732
CP020817.1\|AUM02542.1\|1034989_1035241_+\|hypothetical-protein	unknown	unknown	unknown
CP020817.1\|AUM02539.1\|1032528_1033389_-\|acyl-CoA-thioesterase-II	unknown	unknown	gnl\|CDD\|182519
CP020817.1\|AUM02540.1\|1033589_1034117_+\|glycoprotein-polysaccharide-metabolism-protein	unknown	unknown	gnl\|CDD\|225668
CP020817.1\|AUM02546.1\|1037731_1038802_+\|lac-repressor	unknown	unknown	gnl\|CDD\|181929
CP020817.1\|AUM02545.1\|1037042_1037654_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225239

Protein	Function_ID	Function_description	E-value
CP020817.1\|AUM02531.1\|1022594_1024295_-\|peptide-ABC-transporter-substrate-binding-protein	gnl\|CDD\|226909	COG4533, COG4533, ABC-type uncharacterized transport system, periplasmic component [General function prediction only].	0
CP020817.1\|AUM02530.1\|1021832_1022528_-\|7-cyano-7-deazaguanine-synthase	gnl\|CDD\|182967	PRK11106, PRK11106, queuosine biosynthesis protein QueC; Provisional.	0
CP020817.1\|AUM02537.1\|1030673_1031012_+\|glutamine-synthetase	gnl\|CDD\|182629	PRK10665, PRK10665, P-II family nitrogen regulator.	1.73427e-66
CP020817.1\|AUM02532.1\|1024396_1025215_+\|thiamin-pyrimidine-pyrophosphate-hydrolase	gnl\|CDD\|185080	PRK15126, PRK15126, HMP-PP phosphatase.	0
CP020817.1\|AUM02547.1\|1038904_1041994_+\|beta-D-galactosidase	gnl\|CDD\|236548	PRK09525, lacZ, beta-galactosidase.	0
CP020817.1\|AUM02533.1\|1025255_1026302_-\|cysteine-synthase	gnl\|CDD\|223110	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism].	4.3132e-111
CP020817.1\|AUM02538.1\|1031047_1032337_+\|ammonium-transporter	gnl\|CDD\|182630	PRK10666, PRK10666, ammonium transporter AmtB.	0
CP020817.1\|AUM02544.1\|1035534_1036956_-\|DNA-binding-transcriptional-regulator	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.25493e-90
CP020817.1\|AUM02541.1\|1034150_1034462_-\|cysteine-methyltransferase	gnl\|CDD\|226219	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	2.29539e-50
CP020817.1\|AUM02534.1\|1026417_1026876_+\|transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	5.50396e-53
CP020817.1\|AUM02548.1\|1042033_1042861_-\|nickel/cobalt-efflux-protein-RcnA	gnl\|CDD\|236641	PRK10019, PRK10019, nickel/cobalt efflux transporter RcnA.	1.93818e-160
CP020817.1\|AUM02536.1\|1028671_1030453_+\|multidrug-ABC-transporter-permease/ATP-binding-protein	gnl\|CDD\|182733	PRK10790, PRK10790, SmdB family multidrug efflux ABC transporter permease/ATP-binding protein.	0
CP020817.1\|AUM02529.1\|1021500_1021830_+\|putative-addiction-module-antidote-protein	gnl\|CDD\|226162	COG3636, COG3636, Predicted transcriptional regulator [Transcription].	9.1384e-24
CP020817.1\|AUM02535.1\|1026906_1028679_+\|multidrug-ABC-transporter-permease/ATP-binding-protein	gnl\|CDD\|182732	PRK10789, PRK10789, SmdA family multidrug ABC transporter permease/ATP-binding protein.	0
CP020817.1\|AUM02546.1\|1037731_1038802_+\|lac-repressor	gnl\|CDD\|181929	PRK09526, lacI, lac repressor; Reviewed.	0
CP020817.1\|AUM02539.1\|1032528_1033389_-\|acyl-CoA-thioesterase-II	gnl\|CDD\|182519	PRK10526, PRK10526, acyl-CoA thioesterase II; Provisional.	0
CP020817.1\|AUM02540.1\|1033589_1034117_+\|glycoprotein-polysaccharide-metabolism-protein	gnl\|CDD\|225668	COG3126, COG3126, Uncharacterized protein conserved in bacteria [Function unknown].	2.72992e-53
CP020817.1\|AUM02545.1\|1037042_1037654_+\|hypothetical-protein	gnl\|CDD\|225239	COG2364, COG2364, Predicted membrane protein [Function unknown].	1.33458e-38

>CP020817.1|AUM02538.1|1031047_1032337_+|ammonium-transporter
MKIATLKTGLGSLALLPGLALAATPAVVDKADNAFMMISTALVLFMSIPGIALFYGGLIRGKNVLSMLTQVAVTFALVCVLWVVYGYSLAFGTGNAFFGNFDWVMLKNIELTALMGSFYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWMTLSYVPIAHMVWGGGLLATHGALDFAGGTVVHINAAVAGLVGAYLIGKRVGFGKEAFKPHNLPMVFTGTAILYFGWFGFNAGSASAANEIAALAFVNTVVATAGAILSWVFGEWAVRGKPSLLGACSGAIAGLVGITPACGYVGVGGALLVGLVSGLAGLWGVTALKRVLRVDDPCDVFGVHGVCGIVGCIMTGIFAAKSLGGVGYAEGVTMVHQVLVQLESIAITVVWSAVVAFIGYKLADMTVGLRVPEEQEREGLDVNSHGENAYNA
>CP020817.1|AUM02537.1|1030673_1031012_+|glutamine-synthetase
MKLVTVVIKPFKLEDVREALSSMGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVKIDVAIADDQLDEVIDVISKAAYTGKIGDGKIFVAELQRVIRIRTGESDEAAL
>CP020817.1|AUM02536.1|1028671_1030453_+|multidrug-ABC-transporter-permease/ATP-binding-protein
MRKLGTMWPTLKRLLAYGSPWRKPLSVAVLLLWIAAITEVSGPLLISYFIDNMVAKSYLPLGLVAGLGVAYVGLQLAAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSEFDIQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAITIFPAVLIVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALVLCGLLMLFGLSSNGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDRPRQAYGNDERPLQSGTIAFDNVSFAYREDRLVLQDITLDVPSRGFVALVGHTGSGKSTLASLLMGYYPVTHGEIRLDGRPLASLSHTVLRKGVAMVQQDPVVLADTFYANVTLGRDYSQEQVWDVLEKVQLAELARGFSDGINTKLGEQGNNLSVGQKQLLALARVLIETPQILILDEATASIDSGTEQAIQQALAAVRDHTTLVVIAHRLSTIVEADTILVLHRGQAVERGTHRELLEAKGRYWQMYQLQLAGEELAASVRDEESLSA
>CP020817.1|AUM02535.1|1026906_1028679_+|multidrug-ABC-transporter-permease/ATP-binding-protein
MRLFAQLSWYFRREWQRYLGAVALLIIIAILQLIPPKVVGYVVDGVTEQHYTTARVLMWVGTLVLTAVIVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLIARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPIMALAINRYGEQLHERFKLAQAAFSSLNDRTQESMTSIRMIKAFGLEDRQSALFAADAADTGAKNMRVARIDARFDPTIYIAIGMANMLAIGGGSWMVVQGTLTLGQLTSFAMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVIDGSEAVPEGRGVMTVDVRKFVYPHTEHPVLENVSFTLQPGQMLGICGPTGSGKSTVLSLLQRHFDVTEGDIRFHDIPLTRLLLDEWRGRLAVVSQTPFLFSDTVANNIALGRPGATQEEIEHVARLASVHDDILRLPQGYETEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGDGRTVIISAHRLSALTEASEIVVLQHGHIAQRGQHETLAEQPGWYRDMYRYQQLEAALDDAPEQDEEAANA
>CP020817.1|AUM02534.1|1026417_1026876_+|transcriptional-regulator
MLDKIDRKLLSLLQNDCTLSLQALADAVNLTTTPCWKRLKKLEDDGILLGRVALLDPEKLGLGLTAFVLIKTQHHSSEWYCRFVTQVSEMPEVLGFWRMAGEYDYLMRVQVADMKRYDDFYKRLVNSVPGLSDVTSSFAMEQIKYTTALPIE
>CP020817.1|AUM02533.1|1025255_1026302_-|cysteine-synthase
MNSTWVKHAISEINADYQRSADTHLIRLSLPGFDGIQLYLKDESTHPTGSLKHRLARSLFLYGLCNGWIKEGTTIIESSSGSTAVSEAYFARLLGLPFIAVMPSCTAKRKIEQIEFYGGRCHFVESACEIYAASEMLARELNGHYMDQFTFAERATDWRGNNNIADSIFRQMTHEPHPVPSCIVMSAGTGGTSATIGRYIRCQGYDTQLMVVDPQNSVFLDYWQNRNAELRSPVGSKIEGVGRPRVEPSFIPDVVDEMMRVPDAASVATAHWLETQLGRKVGASTGTNMWGALQLAARMREEGRTGSIVTLLCDSGERYLETYYNAEWVQANIGDIAPWKAQIAELVK
>CP020817.1|AUM02532.1|1024396_1025215_+|thiamin-pyrimidine-pyrophosphate-hydrolase
MARLAAFDMDGTLLMPDHRLGEKTLNTLKRLRERDVTLTFATGRHVLEMRHLLGAFSLDAFLITGNGTRIHSVEGDVLHRQDLNPEVADIVLHSTWDTQASIHVFNDRGWFTGREIPELLHAHVYSGFKYQLIDLRRIPAHAVTKICFCGDHDDLCRLRIQLNEALGDRAHLTFSAVDCLEVLPVGCNKGSALAVLSDHLGLTLKECMAFGDAMNDREMLGSVGRGLIMGNAMAQLKAELPHLPVIGHCRNEAVSHFLTHWLDNNNLPYSPE
>CP020817.1|AUM02531.1|1022594_1024295_-|peptide-ABC-transporter-substrate-binding-protein
MRQLNRLNQYHRLWQPSQGATQQVTISELAARCFCSERHVRTLLRQAQEAGWLSWRAQSGRGKRGELTFHVAPESLRNAMMEEALKSGQQHNALELAQLAPEALRSLLHPFLGGQWQNDTPTLRIPYYRSLEPLQPGFLPGRAEQHLAGEVFSGLTRFNGNSSEPTGDLAHHWDVSADGLRWHFYIRSTLHWHNGDKIETAQLQRSLTALLTLPALRTLFQSVLCIETTHPQCLTFRLHQPDYWLPHRLATYCSRLAHPDHPVVGSGPFRLAAFEPDLVRLESHEQYHLSHPLLKAIEYWITPQLFDYSLGTSCRHPVQIAIGEADELESLRLVSSSTSLGFCYLTLKQSAHLSEIQAKRLINIIHLSRLLHTLPLNEGLITPTQELLPDWTIPEWPDLSDVTLPEALTLVYHLPVELHTMASQLKAYLALQGCELTVIFHDAKTWDGCLELADADIMMGDRLIGEAPEYTLEQWLRCDALWPHVLSAPAYAHLQATLDAVQTQAEARDRHAGLQAIFNRLMESAVLTPLFNYQYQISAPPGVNGIRLNTRGWFDFTEAWLPAPKS
>CP020817.1|AUM02530.1|1021832_1022528_-|7-cyano-7-deazaguanine-synthase
MKRAVVVFSGGQDSTTCLVQALHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPDASGIPNTFVPGRNILFLTLTAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKETRFETPLMWLDKAETWALADYWGKLDLVRNETLTCYNGIKGDGCGQCAACNLRANGLNHYLADKSGVMAAMQKKTGLK
>CP020817.1|AUM02529.1|1021500_1021830_+|putative-addiction-module-antidote-protein
MSATERKYSSSVSHHDAVVKMLRENPSYAQRYLQTALEEIYEEQGIPAYLIALRQVIEARGGIGEISAKAGLSRQQLYRTLSDNGNPTLTTLMKVTRAAGVKLFDSTVK
>CP020817.1|AUM02539.1|1032528_1033389_-|acyl-CoA-thioesterase-II
MSQALNNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQALYAAKETVPADRLVHSFHSYFLRPGDSAKPIVYDVEVLRDGNSFSARRVAAIQNGKPIFYMTASFQAPEPGYEHQKVMPPAPSPDSLKSETDIARALAHLLPPQVKEKFLCDKPLEIRPVEFHNPMKGHAAEPKRQVWIRANGTVPEDFRVHQYLLGYASDFNFLPVALQPHGVGFLEKGMQVATIDHSMWFHRPFNMNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRNRG
>CP020817.1|AUM02540.1|1033589_1034117_+|glycoprotein-polysaccharide-metabolism-protein
MKLVPMLSGVAIAVALSACAGKSAQVPVPAADPNGINTLSQQSIQQPNVSGTIWIKQKVALPPDAVLTVTLSDASLADAPSKVVAQRAVRTEGKQAPFSFVLPYNPSDVQPNARILLSAAVTINGKLVFITDTVQEAINNGGTKIDLNLVPVQQTEVPVAPQTNQPSLPTPPTQM
>CP020817.1|AUM02541.1|1034150_1034462_-|cysteine-methyltransferase
MDEHDSFPQRVWQIVASIPEGYVTTYGDVARLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGAISLTGPDLQRQRQALLSEGVQVSGSGQIDLQKFRWVY
>CP020817.1|AUM02542.1|1034989_1035241_+|hypothetical-protein
MATAVLNVKIDDALKERLRHYAEVNNENLSVTTEKLLLLAFEAVEEAGVSEEDIDNQHTEEESVSPFTPKEIKALRKLLKKRK
>CP020817.1|AUM02543.1|1035237_1035453_+|hypothetical-protein
MKQQLSTASDYNEACDLLRSGYVKHVRLGWNVGSDEFFRIASDWCDTGAKIKKDGDNFVISLKGFPIPPQH
>CP020817.1|AUM02544.1|1035534_1036956_-|DNA-binding-transcriptional-regulator
MSSRRFGSQSLVRLLGHWQQASSRTPLWRQLADALRLLILDGRLALNTRLPGERELATALDVSRTTISSALAHLREEGYLESRHGSGSRVILPDTRAVPTLSAASAALDLSTAALNAGPEIHQAYAHALTAITPHLSLTGYDQLGLPTLREAIAARYTARGLPTRADEVMVVNGAVSGFALILRMMTGPGDRVVVDHPTYPLAIAAIQGAQCRPVGVSLPETGWDTDGFAATLAQTAPRLAYLMPDFHNPTGRCMDIATRQAITDIAAQTRTALVVDETMVDLWFDAPPPPPLAAFNPQATVITLGSAGKSFWGGLRLGWIRASSRTIATLAQTRDTLDLGSPLLEQLAMQWLINNSETFLPARRKMLAERRDRCGDLLREHFPEWKFHEAEGGLSYWIELPGMLATQLAARAEIIGINLGTGTRFGLSGAFDRYLRMPFSLESTELEQALLRIKPLWLALNKNVPSLKRSVI
>CP020817.1|AUM02545.1|1037042_1037654_+|hypothetical-protein
MVRRLLQLYVGLGLYGLSTAMFIRSDLGVDPWDVFHLGVGMQLGMTIGTVIILVGAAVLLLWIPLRQMPGLGTISNVICIGLAADASMALIPELDSLPVRIAFLVSGIVMNAIATSMYIGAGFGPGPRDGLMTGIHARLGWSIRSVRTSIEVSVLLIGCVLGGTFGVGTVLYALTIGPLIQLCLPWFRQKPRIAEIPQPERVV
>CP020817.1|AUM02546.1|1037731_1038802_+|lac-repressor
MKAITLYDVALLAGVSYQTVSRVINDAEHVSARTREKVQQAMAELHYVPNLRAQQLAGKRTRTLGLITTDLALHAPSQIVSAVKSRAAEQGASVLISMVEQPQQCQAALQALLAQRVDALLVNVPLDDPLAEELGALASPVPVLFLDVAPSARVNSLVFNAEQGARLGVEHLLSLGHQRIALLSGPESSVSARARLAGWKATLALAGLNATAVAYGDWSAASGYEKGHVLLSGAALPDAILVANDQMALGVMRACAEKGIAIPGQLSVVGFDDTADSAWFSPPLATIRQAFREAGERSVEWLLAPSGGEACRQVQLPVTLVTRHSSARRNPKQAEREDLAQQLRSLALLAEQIARK
>CP020817.1|AUM02547.1|1038904_1041994_+|beta-D-galactosidase
MSTTSPLTLSAILARRDWENPGVTQWNRLAAHAPLHSWRNEPSAREDAGSTSRHYLNGVWQFSFFTAPERVPQAWVTEDCADAVAMPVPSNWQMQGFDTPIYTNVTYPIPVNPPFVPQENPTGCYSLTFEVDDAWLRSGQTRIIFDGVNSAFHLWCNGQWMGYSQDSRLPAEFDLSAALRPGQNRLAVMVLRWCDGSYLEDQDMWRMSGIFRDVALLHKPETQIADYHVVTDLNAELDRAVLKVDVALAGAGFADCEVVMTLWRTGEKCASVSRRPGSAIVDERGSWAERLTAAIPVDQPALWSAETPELYRLTIALLNPQGEVLEVEACDVGFRRVEIGNGLLKLNGKPLLIRGINRHEHHPENGQVMDEATMRRDIEIMKQHNFNAVRCSHYPNHPMWYRLCDRYGLYVVDEANIETHGMVPMSRLADDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWLKTTDPTRPVQYEGGGANTAATDIVCPMYARVDRDQPFPAVPKWSIKKWIGMPDETRPLILCEYAHAMGNSFGGFAKYWEAFRSHPRLQGGFVWDWVDQALTKRDEKGNLFWAYGGDFGDKPNDRQFCLNGLVFPDRSPHPALFEAQRAQQFFTFTQVSTSPLVIEVQSGYLFRHTDNEVLNWTVARDGDVLAAGEVTLSMAPEGTQRLEIDLPALKAVPGEVWLNVEVRQPRATPWSPADHRCAWEQWPLPAPLFIAPPVPAGEPPVLTQSDRILEIAHRQQRWQFDRVTGNLSQWWRNGVETLLSPLTDNVSRAPLDNDIGVSEATQIDPNAWVERWKAAGMYELTSRVLHCEARQHAGDVVVTTQHVLEYRGKALFMSRKVWRVDDRGVLHGDIQIDVASDIPEPARVGLSVHLAETPENVHWLGLGPHENYPDRKLAAQQGRWTLPLEAMHTPYIFPTENGLRCDTRELVVGTHQLNGRFHFSVSRYGQQQLRETTHHHLLREEPGCWLNLDAFHMGVGGDDSWSPSVSPEFILQTRQLRYTFSWQQNP
>CP020817.1|AUM02548.1|1042033_1042861_-|nickel/cobalt-efflux-protein-RcnA
MTDFASLLQQGNAWLFVPSAILLGALHGLEPGHSKTMMAAFIVAIRGTLKQAVLLGLAATLSHTAVVWLVAMAGLWFGRGWDAHTSEPWFQLISGGLIVAIALWMAWRTWKESQPHDHHHHDHDHHHNDHDHHHDHHHHHHEHSLVEEEWQDAHQRAHAQDINRRFSGQNVTTGQIVMFGLTGGLIPCPASITVLLICLQLKHFALGATLVFSFSIGLALTLVASGAIAALSLKHATKRWPGFSELSRKAPWISAALITVVGIYMSLHGLSGILA

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Crispr_ID: CP020817_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020817_4

1244241-1244367

Orphan

Consensus_repeat	Method
CCCGTGGGAGAGGGTTGGGGTGAGGGCATCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP020817_4

>merge|CP020817|4|1244241-1244367|CRISPRCasFinder
CCCGTGGGAGAGGGTTGGGGTGAGGGCATCAGGCTGCACATGGTAAAAGCAAAACGGCAACCACGTTGCCGTTTTTAGTGTTTGCCCCCTCTCCCCGTGGGAGAGGGGTGGGGTGAGGGCATCAGGC

>CP020817|4|4|1244241-1244367|CRISPRCasFinder
CCCGTGGGAGAGGGTTGGGGTGAGGGCATCAGGC	TGCACATGGTAAAAGCAAAACGGCAACCACGTTGCCGTTTTTAGTGTTTGCCCCCTCTC
CCCGTGGGAGAGGGGTGGGGTGAGGGCATCAGGC

Protein	Signature genes	Signature genes Name	Protein_function
CP020817.1\|AUM02739.1\|1247718_1248624_-\|glutamate/aspartate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236763
CP020817.1\|AUM02729.1\|1237602_1238070_-\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	unknown	unknown	gnl\|CDD\|129349
CP020817.1\|AUM02736.1\|1245423_1246149_-\|arginine-transporter-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|224051
CP020817.1\|AUM02741.1\|1250520_1251399_-\|magnesium/cobalt-efflux-protein	unknown	unknown	gnl\|CDD\|185050
CP020817.1\|AUM02737.1\|1246148_1246823_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|185062
CP020817.1\|AUM02726.1\|1233428_1234541_-\|septal-ring-lytic-transglycosylase-RlpA	unknown	unknown	gnl\|CDD\|236733
CP020817.1\|AUM02732.1\|1239318_1240350_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|235511
CP020817.1\|AUM02728.1\|1235672_1237574_-\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|236761
CP020817.1\|AUM02733.1\|1240349_1240919_-\|LPS-assembly-lipoprotein-LptE	unknown	unknown	gnl\|CDD\|236762
CP020817.1\|AUM02744.1\|1253162_1254587_-\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl\|CDD\|237673
CP020817.1\|AUM02740.1\|1248976_1250515_-\|apolipoprotein-N-acyltransferase	unknown	unknown	gnl\|CDD\|234721
CP020817.1\|AUM02743.1\|1251952_1252999_-\|nucleoside-triphosphate-hydrolase	unknown	unknown	gnl\|CDD\|224616
CP020817.1\|AUM05840.1\|1243730_1244213_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182915
CP020817.1\|AUM02742.1\|1251488_1251956_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|234575
CP020817.1\|AUM02745.1\|1254722_1255898_+\|2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol-hydroxylase	unknown	unknown	gnl\|CDD\|181199
CP020817.1\|AUM02731.1\|1238660_1239326_-\|nicotinate-nicotinamide-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
CP020817.1\|AUM02730.1\|1238073_1238391_-\|ribosome-silencing-factor-RsfS	unknown	unknown	gnl\|CDD\|183184
CP020817.1\|AUM02734.1\|1240933_1243540_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
CP020817.1\|AUM02738.1\|1246822_1247563_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
CP020817.1\|AUM02727.1\|1234557_1235670_-\|rod-shape-determining-protein-RodA	unknown	unknown	gnl\|CDD\|182737

Protein	Function_ID	Function_description	E-value
CP020817.1\|AUM02739.1\|1247718_1248624_-\|glutamate/aspartate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236763	PRK10797, PRK10797, glutamate and aspartate transporter subunit; Provisional.	0
CP020817.1\|AUM02729.1\|1237602_1238070_-\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	gnl\|CDD\|129349	TIGR00246, Ribosomal_RNA_large_subunit_methyltransferase_H, rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA. [Protein synthesis, tRNA and rRNA base modification].	1.15984e-97
CP020817.1\|AUM02736.1\|1245423_1246149_-\|arginine-transporter-ATP-binding-subunit	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	9.56625e-157
CP020817.1\|AUM02741.1\|1250520_1251399_-\|magnesium/cobalt-efflux-protein	gnl\|CDD\|185050	PRK15094, PRK15094, magnesium/cobalt transporter CorC.	0
CP020817.1\|AUM02737.1\|1246148_1246823_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|185062	PRK15107, PRK15107, glutamate/aspartate ABC transporter permease GltK.	7.63126e-145
CP020817.1\|AUM02726.1\|1233428_1234541_-\|septal-ring-lytic-transglycosylase-RlpA	gnl\|CDD\|236733	PRK10672, PRK10672, endolytic peptidoglycan transglycosylase RlpA.	0
CP020817.1\|AUM02732.1\|1239318_1240350_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	1.05253e-148
CP020817.1\|AUM02728.1\|1235672_1237574_-\|penicillin-binding-protein-2	gnl\|CDD\|236761	PRK10795, PRK10795, penicillin-binding protein 2; Provisional.	0
CP020817.1\|AUM02733.1\|1240349_1240919_-\|LPS-assembly-lipoprotein-LptE	gnl\|CDD\|236762	PRK10796, PRK10796, LPS-assembly lipoprotein RlpB; Provisional.	1.38198e-110
CP020817.1\|AUM02744.1\|1253162_1254587_-\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl\|CDD\|237673	PRK14325, PRK14325, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
CP020817.1\|AUM02740.1\|1248976_1250515_-\|apolipoprotein-N-acyltransferase	gnl\|CDD\|234721	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed.	0
CP020817.1\|AUM02743.1\|1251952_1252999_-\|nucleoside-triphosphate-hydrolase	gnl\|CDD\|224616	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms].	3.08069e-174
CP020817.1\|AUM05840.1\|1243730_1244213_+\|hypothetical-protein	gnl\|CDD\|182915	PRK11032, PRK11032, zinc ribbon-containing protein.	1.96533e-112
CP020817.1\|AUM02742.1\|1251488_1251956_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|234575	PRK00016, PRK00016, metal-binding heat shock protein; Provisional.	1.98965e-68
CP020817.1\|AUM02745.1\|1254722_1255898_+\|2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol-hydroxylase	gnl\|CDD\|181199	PRK08020, ubiF, 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed.	0
CP020817.1\|AUM02731.1\|1238660_1239326_-\|nicotinate-nicotinamide-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	6.25599e-86
CP020817.1\|AUM02730.1\|1238073_1238391_-\|ribosome-silencing-factor-RsfS	gnl\|CDD\|183184	PRK11538, PRK11538, ribosome silencing factor.	3.4468e-69
CP020817.1\|AUM02734.1\|1240933_1243540_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
CP020817.1\|AUM02738.1\|1246822_1247563_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.50884e-66
CP020817.1\|AUM02727.1\|1234557_1235670_-\|rod-shape-determining-protein-RodA	gnl\|CDD\|182737	PRK10794, PRK10794, rod shape-determining protein RodA.	0

>CP020817.1|AUM05840.1|1243730_1244213_+|hypothetical-protein
MNKVAQFYRELVATLTERLRNGERDIDALVEQARARVTQTGELTRTEVEEVTRAVRRDLEEFARSYQESQEEVTDSVFMRVIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVVGLGNLVCENCHHHFAVYTPDVLPLCPKCGHDQFQRRPFEP
>CP020817.1|AUM02734.1|1240933_1243540_-|leucine--tRNA-ligase
MKTGPLAAMQEQYRPEEIESKVQQHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDNLDHWPDTVKTMQRNWIGRSEGVEITFNVENYDQTLTVYTTRPDTFMGATYLAVAAGHPLAQKAAENNPELAAFIDECRNTKVAEADMATMEKKGVATGFYAKHPLTGEAIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFATKYSLPIKAVILAADGSEPDLSEQALTEKGTLFNSGEFSGLSFEEGFNAIADKLASLGVGERKVNFRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPEDQLPVILPEDVVMDGITSPIKADPEWAKTTVNGQPALRETDTFDTFMESSWYYARYTCPQYQDGMLDSDAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGANGERNWVSPVDAIVERDEKGRIVKAKDAEGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTALGNAPALNAAALTEDQQALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAPQDGEQDRALMREALLAVVRMLNPFTPHVSFTLWQELKGEGDIDNAPWPQADEAAMVENTTLVVVQVNGKVRGKITVAVDATEEQVRERAGQEPLVAKYLEGVTVRKVIYVPGKLLNLVVG
>CP020817.1|AUM02733.1|1240349_1240919_-|LPS-assembly-lipoprotein-LptE
MRQLATILLSLAVLVTAGCGWHLRNTTAVPAEMKTMIFDSSDPNGPLSRAVRNQLRLNGVELVEKQTLRQDVPSLRIIGGGLSRDTASIFQDGRTAEYQMVLTVNAAVLIPGKDIYPISTKVFRSFFDNPQTALAKDAEQQIIINEMYDKAAEQLIRKLPGIAASTRQGSDIVEKPVAGTLPAANSLGK
>CP020817.1|AUM02732.1|1239318_1240350_-|DNA-polymerase-III-subunit-delta
MIRLYPEQLRAQLKEGLRAAYLLLGNDPLLLQESLDAVRHEAASQGFDEHHTVQLDNNTDWNALFSLCQAMSLFASRQTIQILLPENGPNAAINEQLATLVSLLHSDLLLIVRGNKLTKAQENAAWFTQLAAHAVQVTCQTPEQAHLPKWVAARAKQNNLQLDDAANQLLCYCYEGNLLALAQALDRLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLSAKSKRAMHILQQLRLEGSEPVILLRTLQRELLLLITLKRQSAHTPLRSLFDKHRVWQNRRALITEAVNRLGHEQLRQAVQLLMRAELTLKQDYGQSVWAELESLSLLLCHKALADVFIDG
>CP020817.1|AUM02731.1|1238660_1239326_-|nicotinate-nicotinamide-nucleotide-adenylyltransferase
MDSMHSLQALYGGTFDPVHYGHLKPVEILANLIGLQRVTIMPNNVPPHRPQPEATSEQRKEMLALAIADKPLFRLDERELRRDTPSWTSQTLQEWRAEQGPDQPLAFIIGQDSLLNFPTWHQYETILENSHLLVCRRPGYPLTMREEQYQQWLEDHLTDNVEDLHNQPAGKIYLAETPWFDISATLIRERLQQGLACDDLLPTPVLAYIHAHGLYQKSADE
>CP020817.1|AUM02730.1|1238073_1238391_-|ribosome-silencing-factor-RsfS
MQGKALQDFVIDKIDDLKGQDIIAIDVKGKSSITDCMIICTGTSTRHVVSIADHVVQESRAAGLLPLGVEGEATADWVVVDLGDVIVHVMQDESRRLYELEKLWG
>CP020817.1|AUM02729.1|1237602_1238070_-|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH
MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELVEIPAGKRGKNADIKRILDKEGELMLAAAGKNRIVTLDIPGKPWDTPQLAQELERWKQDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
>CP020817.1|AUM02728.1|1235672_1237574_-|penicillin-binding-protein-2
MKLQNSFRDYTAESALFVRRALVAFTGILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGTPLALNRTIYQIEMMPEKVDNVQDTLEALKSVVDLNDDDIAAFKKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVSKINDKDVDRLDKDGKLANYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDVYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGILAMVSMPSYDPNLFVDGISSKDYSGLLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVINRNTSLFDPGWWQLPGSDKRYRDWKKWGHGHLNVTKSLEESADTFFYQVAYDMGIDRLSEWMSKFGYGHYTGVDLSEERSGNMPTREWKLKRFKKPWYQGDTIPVGIGQGYWTATPLQMNKAMMILINDGVVKVPHLLQSTVEDGKKVPWNQPHEAPVGDIHSGFWEIAKDGMYGVANRPNGTAHKYFAGTPYKVAAKSGTAQVFGLKANETYNAHRIAERLRDHKLMTAFAPYDNPQVAVAMILENGGAGPAVGTIMRQILDHIMLGDNNTELPAENPAAAAAEDQ
>CP020817.1|AUM02727.1|1234557_1235670_-|rod-shape-determining-protein-RodA
MTDNPNKKSLWDKIHIDPAMLLILLALLVYSALVIWSASGQDIGMMERKIGQIAMGLIIMVVMAQIPPRVYEGWAPYLYIFCIILLVAVDAFGAISKGAQRWLDLGVVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTAIALVLIFLPTLLVAAQPDLGTSILIALSGLFVLFLSGLSWRLIGIAVVLIAAFIPILWFFLMHDYQRQRVMMLLDPETDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVGILILLALYVLLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGVPLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV
>CP020817.1|AUM02726.1|1233428_1234541_-|septal-ring-lytic-transglycosylase-RlpA
MRKQWLGICIAASLLAACTSDDGQQQATVAPPQPAVCNGPIVEISGADPVYEPLNASANQDYQRDGKSYKIVQDPSRFSQAGFAAIYDAEPGSNLTASGEAFDPMQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRASADRLNTSNNTKVRIDPIIVAQDGSLSGPGTACTTVAKQTYALPDRPNLDGGMGSVSSPAEPAQPGGEIRPISNDTLQSEDSTGAPVKSSGFLGAPTTLASGVLEGSEPTPAPAPVAAPATQPAPVTAPAATQSAAVTAPAAASGSYVVQVGAVSDQARARQYQQRLSQQFGVPGRVEQNGAVWRIQMGPFASKSQAASLQQRLQNEAQLQSFIAVAK
>CP020817.1|AUM02736.1|1245423_1246149_-|arginine-transporter-ATP-binding-subunit
MISLKNVSKWYGHFQVLTDCSTEVKKGDVVVVCGPSGSGKSTLIKTVNGLEPVQQGEIVVNGTKVNDKKTNLAQLRSHVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKKASREKGLKLLERVGLSAHADKFPAQLSGGQQQRVAIARALCMDPVAMLFDEPTSALDPEMINEVLDVMVELAHEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKEEFFANPKSERAKDFLAKILH
>CP020817.1|AUM02737.1|1246148_1246823_-|amino-acid-ABC-transporter-permease
MYEFDWSSIVPSMPYLLDGLVITLKITVIAIIIGIVWGTLLAVMRLSSFKPLAWFATAYVNVFRSIPLVMVLLWFYLIVPGFLQKVLGLSPKTDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMQLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMVLFAGAVYFVISLSASLLVSWLKKRTV
>CP020817.1|AUM02738.1|1246822_1247563_-|amino-acid-ABC-transporter-permease
MSIDWNWGIFLQQAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSTLGTLYVELFRNVPLIVQFFTWYLVIPELLPENIGMWFKSELDPNVQFFVSSMMCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMNLVERKIRLPGNLGGK
>CP020817.1|AUM02739.1|1247718_1248624_-|glutamate/aspartate-ABC-transporter-substrate-binding-protein
MQLRKLATAMLVMGMSAGVVHAEDAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAAFSDTIFVVGTRLLTKKGGEIKDFADLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGTAQSKEAYGCMLRKDDPQFKKLIDDTIAQVQTSGEAEKWFDKWFKNPIPPKNLNMNFELSDDMKALFKSPNDKALN
>CP020817.1|AUM02740.1|1248976_1250515_-|apolipoprotein-N-acyltransferase
MAFAPLLERQRIRLLLALLLGASGTLAFSPYDIWPAAILSLMGLQGLTLNRRPVQAAAIGYFWGLGLFGSGINWVYVSIAQFGGMPGPVNVFLVVLLAAYLSLYTGLFAGILSRLWPKTTWLRVAIAAPVVWQITEFLRGWVLTGFPWLQFGYSQIDGPLKGLAPVMGVEAINFLLMVVCGLLVLALVQRCWKPLAVALVLFALPFPLRYIQWFTPEPERTLQVSMVQGNIPQSMKWDEKELLNTLKIYANATEEVMGKSQLIIWPESAIPDLEINQQPFLNMMNDLLLAHGSTLITGIVDARLNQQNRYDTYNSIITLGKDSEYSYHSTDRYNKNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYVQPQLHAHGLALTAAICYEIILGEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRSLELARPLLRSTNNGITAVIGPQGEIQAMIPQFTREVLTTKVTPTTGLTPYARTGNWPLWILTVLFGFGAVLMSLRQRRK
>CP020817.1|AUM02741.1|1250520_1251399_-|magnesium/cobalt-efflux-protein
MSDDNSHSSDTTTSKKGFFSLILNQLFHGEPKNRDELLELIRDSGQNDLIDEDTREMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMEKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEEDIDFRQLSRHTWTVRALASIEDFNDAFGTHFSDEEVDTIGGLVMQAFGHLPARGETVDIDGYQFKVAMADSRRIIQVHVRTPDDSPVPKLED
>CP020817.1|AUM02742.1|1251488_1251956_-|rRNA-maturation-RNase-YbeY
MSQVILDLQLACEDNSGMPDEAQFQKWLDGVIPQFQEESEVTIRLVDEAESHELNLTYRGKDKPTNVLSFPFEAPPGIEMPLLGDLIICRQVVEQEAKEQQKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMESLETEIMLALGYEDPYIAEKE
>CP020817.1|AUM02743.1|1251952_1252999_-|nucleoside-triphosphate-hydrolase
MNIDTREISLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVNAAADILRSLYVDTSPMRGEIQDIEPEQIHLAIKEARVLEQSAESVPDYGKAINIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRSTKSGLRHAIEVLAEVDEISFNFFHSEDVVRHPVVARIVNAYEAWEEADQKRKAELAAERKREAQEQEQK
>CP020817.1|AUM02744.1|1253162_1254587_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MTKKLHIKTWGCQMNEYDSSKMADLLDSTHGYQLTENAKDADVLLLNTCSIREKAQEKVFHVLGRWKLLKRKNPDLIIGVGGCVASQEGKLIRQRAPYVDIVFGPQTLHRLPEMINQVRGNRSPVVDVSFPEIEKFDRLPEPRADGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPADDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFAELLRLVAAIDGIDRIRFTTSHPMEFTDDIIDVYRDTPELVSFLHLPIQCGSDRVLNLMGRPHTVLEYKSTIRKLREARPDIQISSDFIVGFPGETADDFERTMKLIGEVNFDVSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQANAWSRRMLGTVQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEIVEVLTNSLRAKLVRTEDEMGLRIAESPESVISRTRKENDSGVGIYQP
>CP020817.1|AUM02745.1|1254722_1255898_+|2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol-hydroxylase
MTLLHTEVAVVGGGMVGGALALGLAQQGFEVTVIEQAAPPAFDPASKPDVRISAISAASVDLLRGLGVWEAVLAMRAHPYSRLETWEWENAHVAFDAAELKLPRLGYMVENNVLQQALWQALEAHPKVTLRVPASIKALHPQESGYSLTLDSGDELAVKLVVGADGANSQVRQMAGIGVHAWQYEQSCMLITVECEHAPGESTWQHFTPNGPHAFLPLFDNWASLVWYDKPARIRQLQGLSMEQLQREIRLHFPGRLGNVTPVAAGAFPLTRRHALQYAREGLALVGDAAHTIHPLAGQGVNLGYRDVDALLDVLSSARGHAENWASHQILKRYQTRRMADNFIMQSGMDLFYAGFSNDLAPVRILRNIGLMAAERAGGLKRQALKYALGL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1757828 : 1815721

Enterobacterial_phage(33.33%)

capsid,integrase,terminase,portal,head,tail,tRNA

attL 1767937:1767951|attR 1785674:1785688

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM03207.1\|1757828_1758941_-\|tRNA	tRNA(5-methylaminomethyl-2-thiouridine)- methyltransferase	NA	NA	NA	NA
AUM03208.1\|1758981_1759455_-	NUDIX hydrolase	NA	NA	NA	NA
AUM03209.1\|1759464_1760118_-	23S rRNA pseudouridine synthase E	NA	NA	NA	NA
AUM03210.1\|1760235_1761486_+	isocitrate dehydrogenase (NADP(+))	Q77Z09	Phage_21	7.9e-21	94.4
AUM03211.1\|1761563_1761911_+	hypothetical protein	NA	NA	NA	NA
AUM03212.1\|1761985_1762231_+	hypothetical protein	NA	NA	NA	NA
AUM03213.1\|1762521_1764021_-	diguanylate phosphodiesterase	NA	NA	NA	NA
AUM05854.1\|1764256_1765777_+	hypothetical protein	NA	NA	NA	NA
AUM05855.1\|1765902_1767375_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	2.0e-15	31.2
AUM03214.1\|1767660_1767909_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
1767937:1767951	attL	NA	NA	NA	NA
AUM05856.1\|1768183_1769212_-	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	1.7e-16	33.2
AUM03215.1\|1769522_1769777_+	DUF333 domain-containing protein	NA	NA	NA	NA
AUM03216.1\|1769857_1770163_+	hypothetical protein	NA	NA	NA	NA
AUM03217.1\|1770163_1770508_-	MarR family transcriptional regulator	NA	NA	NA	NA
AUM03218.1\|1770609_1771317_+	hypothetical protein	NA	NA	NA	NA
AUM03219.1\|1771349_1772537_-	MFS transporter	NA	NA	NA	NA
AUM03220.1\|1772636_1773428_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUM03221.1\|1773411_1773858_-	DUF441 family protein	NA	NA	NA	NA
AUM03222.1\|1774129_1774630_-	hypothetical protein	NA	NA	NA	NA
AUM03223.1\|1774892_1776035_-\|integrase	integrase	O21929	Phage_21	4.6e-92	47.9
AUM03224.1\|1776009_1776273_-	hypothetical protein	NA	NA	NA	NA
AUM03225.1\|1776305_1776575_-	hypothetical protein	K7PKM4	Enterobacterial_phage	4.9e-37	86.5
AUM03226.1\|1777528_1777729_-	hypothetical protein	NA	NA	NA	NA
AUM03227.1\|1777730_1778171_-	hypothetical protein	K7P6V8	Enterobacteria_phage	7.9e-08	46.8
AUM03228.1\|1778119_1778311_-	hypothetical protein	NA	NA	NA	NA
AUM03229.1\|1778307_1778778_-	hypothetical protein	A0A2H4FN96	Salmonella_phage	7.9e-14	50.0
AUM03230.1\|1778774_1779602_-	chromosome partitioning protein ParB	K7PKM7	Enterobacterial_phage	6.0e-126	87.4
AUM03231.1\|1779601_1779961_-	hypothetical protein	K7PJS4	Enterobacterial_phage	6.5e-53	91.6
AUM03232.1\|1780684_1780873_-	hypothetical protein	K7PGV8	Enterobacterial_phage	8.2e-07	96.3
AUM03233.1\|1781012_1781732_-	LexA family transcriptional repressor	A0A2R2X2B0	Escherichia_phage	2.4e-78	62.9
AUM03234.1\|1781830_1782049_+	hypothetical protein	A0A2K8HL98	Pseudomonas_phage	4.9e-11	60.3
AUM03235.1\|1782090_1782561_+	hypothetical protein	K7PJS5	Enterobacterial_phage	4.2e-76	92.9
AUM03236.1\|1782801_1783014_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	3.3e-12	63.5
AUM03237.1\|1782970_1783897_+	transcriptional regulator	K7PLZ7	Enterobacterial_phage	3.3e-72	88.2
AUM03238.1\|1783893_1784388_+	hypothetical protein	NA	NA	NA	NA
AUM03239.1\|1784387_1785047_+	DNA methyltransferase	I6PDF5	Cronobacter_phage	2.6e-100	80.5
AUM03240.1\|1785043_1785292_+	hypothetical protein	NA	NA	NA	NA
AUM03241.1\|1785288_1785609_+	LexA family transcriptional regulator	K7PHB4	Enterobacterial_phage	1.0e-41	78.3
AUM03242.1\|1785605_1785995_+	hypothetical protein	K7PKN5	Enterobacterial_phage	4.4e-71	100.0
1785674:1785688	attR	NA	NA	NA	NA
AUM03243.1\|1785991_1786981_+	hypothetical protein	K7PJS6	Enterobacterial_phage	5.1e-188	95.1
AUM05857.1\|1786995_1787358_+	antitermination protein Q	K7PGW2	Enterobacterial_phage	1.9e-60	97.5
AUM03244.1\|1787791_1788043_-	hypothetical protein	NA	NA	NA	NA
AUM05858.1\|1788053_1788917_-	hypothetical protein	NA	NA	NA	NA
AUM03245.1\|1789161_1789557_+	hypothetical protein	K7PHB9	Enterobacterial_phage	9.1e-64	99.2
AUM03246.1\|1789543_1789825_+	hypothetical protein	K7PKN9	Enterobacterial_phage	5.3e-42	92.5
AUM03247.1\|1789824_1790454_+	endolysin	G8C7W0	Escherichia_phage	3.4e-97	84.7
AUM03248.1\|1790461_1790737_+	hypothetical protein	G8C7W1	Escherichia_phage	4.7e-27	78.9
AUM03249.1\|1790913_1791426_-	hypothetical protein	NA	NA	NA	NA
AUM03250.1\|1791476_1792934_+	glycosyltransferase	A0A220NRM5	Escherichia_phage	2.2e-264	89.1
AUM03251.1\|1792915_1793506_+	hypothetical protein	K7PGW6	Enterobacterial_phage	1.0e-90	80.6
AUM03252.1\|1793502_1793847_+	HNH endonuclease	K7P7P4	Enterobacteria_phage	1.1e-46	73.0
AUM03253.1\|1793973_1794438_+\|terminase	terminase	Q9B019	Phage_GMSE-1	5.7e-49	62.7
AUM03254.1\|1794391_1796134_+\|terminase	terminase	A0A0U2C138	Paracoccus_phage	1.7e-133	44.3
AUM03255.1\|1796133_1797438_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	2.9e-223	88.9
AUM03256.1\|1797451_1798300_+	peptidase S14	K7PH05	Enterobacteria_phage	1.8e-138	92.1
AUM03257.1\|1798309_1799521_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	5.2e-195	86.5
AUM03258.1\|1799561_1799810_+	hypothetical protein	K7PHI6	Enterobacteria_phage	4.9e-15	83.0
AUM03259.1\|1799809_1800136_+	hypothetical protein	K7PKT4	Enterobacteria_phage	7.0e-46	77.8
AUM03260.1\|1800144_1800483_+\|head,tail	head-tail adaptor protein	A0A2H4JHK5	uncultured_Caudovirales_phage	4.7e-37	67.9
AUM03261.1\|1800479_1800929_+	hypothetical protein	K7PH84	Enterobacterial_phage	2.9e-74	98.0
AUM03262.1\|1800925_1801273_+	hypothetical protein	K7PKL6	Enterobacterial_phage	4.2e-57	97.4
AUM03263.1\|1801326_1801797_+\|tail	phage tail protein	A0A220NRQ0	Escherichia_phage	4.4e-81	98.7
AUM03264.1\|1801851_1802253_+\|tail	phage tail protein	K7PGV0	Enterobacterial_phage	7.3e-69	99.2
AUM05859.1\|1802276_1802540_+\|tail	phage tail protein	K7P7L5	Enterobacteria_phage	3.0e-39	90.8
AUM03265.1\|1802612_1802954_+	hypothetical protein	NA	NA	NA	NA
AUM03266.1\|1802995_1806256_+\|tail	phage tail tape measure protein	A0A220NRN7	Escherichia_phage	0.0e+00	74.8
AUM03267.1\|1806269_1806863_+	hypothetical protein	S4TSP7	Salmonella_phage	6.5e-98	86.8
AUM03268.1\|1806862_1807447_+	hypothetical protein	S4TND4	Salmonella_phage	2.5e-94	85.5
AUM03269.1\|1807453_1807852_+	hypothetical protein	S4TR39	Salmonella_phage	1.2e-63	82.6
AUM03270.1\|1807851_1810560_+\|tail	phage tail protein	S4TTF5	Salmonella_phage	0.0e+00	74.8
AUM03271.1\|1810562_1811516_+	hypothetical protein	G5DMH8	Enterobacter_virus	3.2e-99	53.8
AUM03272.1\|1811563_1812868_+\|tail	phage tail protein	K7PHF0	Enterobacteria_phage	3.6e-141	90.6
AUM03273.1\|1812963_1813230_-	virulence protein MsgA	K7PKR6	Enterobacteria_phage	8.9e-39	94.3
AUM03274.1\|1813318_1813558_+	hypothetical protein	K7P7N3	Enterobacteria_phage	6.7e-38	93.6
AUM03275.1\|1813557_1813878_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.3e-55	96.2
AUM03276.1\|1814437_1815721_-	hypothetical protein	A0A140HLI1	Bacillus_phage	1.3e-10	36.3

DBSCAN-SWA_2

1985109 : 2043239

Enterobacteria_phage(27.45%)

integrase,terminase,tail

attL 1977801:1977841|attR 2050812:2050852

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1977801:1977841	attL	NA	NA	NA	NA
AUM03436.1\|1985109_1986408_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	4.7e-16	24.5
AUM03437.1\|1986437_1987718_-\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	1.3e-122	53.1
AUM03438.1\|1987717_1987933_-	hypothetical protein	A0A0U2RY08	Escherichia_phage	8.5e-16	50.7
AUM03439.1\|1987997_1988240_-	DUF4060 domain-containing protein	K7PHF4	Enterobacteria_phage	7.8e-34	94.9
AUM03440.1\|1988278_1989364_-	enterohemolysin	K7PKR8	Enterobacteria_phage	3.7e-123	63.6
AUM03441.1\|1989373_1992094_-	exodeoxyribonuclease VIII	H6WRX1	Salmonella_phage	5.5e-293	62.6
AUM03442.1\|1992276_1992453_-	DUF1482 domain-containing protein	NA	NA	NA	NA
AUM03443.1\|1992662_1992854_+	hypothetical protein	S5FM78	Shigella_phage	1.2e-08	45.8
AUM03444.1\|1993311_1994229_-	hypothetical protein	A0A1R3Y6Z6	Salmonella_virus	6.0e-135	75.1
AUM03445.1\|1994318_1994732_-	transcriptional regulator	A0A0M4R5D1	Salmonella_phage	6.8e-46	75.0
AUM03446.1\|1994804_1995032_+	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	1.4e-21	64.9
AUM03447.1\|1995034_1995586_+	hypothetical protein	K7PJT7	Enterobacteria_phage	5.2e-33	48.4
AUM03448.1\|1995730_1996588_+	hypothetical protein	K7PGZ0	Enterobacteria_phage	3.4e-100	70.4
AUM03449.1\|1996584_1997271_+	phage replication protein	G8C7U6	Escherichia_phage	4.0e-83	64.6
AUM03450.1\|1997390_1997609_+	hypothetical protein	NA	NA	NA	NA
AUM05865.1\|1997935_1998844_-	lipid A biosynthesis palmitoleoyl acyltransferase	A0A1W6JP29	Morganella_phage	2.4e-75	52.9
AUM05866.1\|1999036_1999312_-	hypothetical protein	NA	NA	NA	NA
AUM05867.1\|1999712_1999946_+	hypothetical protein	A0A192Y6D5	Salmonella_phage	3.2e-16	55.3
AUM03451.1\|1999963_2008546_-	cyclic beta 1-2 glucan synthetase	NA	NA	NA	NA
AUM03452.1\|2009200_2009425_+	DNA damage-inducible protein I	K7PM44	Enterobacteria_phage	3.1e-21	62.3
AUM05868.1\|2009576_2009774_+	hypothetical protein	K7PHG9	Enterobacteria_phage	3.1e-20	70.5
AUM03453.1\|2009813_2010425_+	hypothetical protein	H6WRY7	Salmonella_phage	2.0e-94	82.5
AUM03454.1\|2010415_2010622_+	hypothetical protein	H6WRY8	Salmonella_phage	2.3e-26	78.5
AUM05869.1\|2010624_2010987_+	hypothetical protein	K7PM48	Enterobacteria_phage	2.6e-49	80.5
AUM03455.1\|2010983_2011817_+	antitermination protein	K7PKS8	Enterobacteria_phage	6.3e-123	78.3
AUM03456.1\|2012009_2012201_+	hypothetical protein	NA	NA	NA	NA
AUM03457.1\|2012871_2013174_+	hypothetical protein	O64361	Escherichia_phage	3.1e-32	67.3
AUM03458.1\|2013173_2013710_+	lysozyme	K7PM52	Enterobacteria_phage	2.6e-90	89.6
AUM03459.1\|2013706_2014225_+	hypothetical protein	K7PHH7	Enterobacteria_phage	2.3e-75	84.2
AUM03460.1\|2014613_2015027_+	C-lysozyme inhibitor	NA	NA	NA	NA
AUM03461.1\|2015107_2015341_-	hypothetical protein	NA	NA	NA	NA
AUM03462.1\|2015480_2016482_+\|terminase	terminase small subunit	I6X6R5	Burkholderia_virus	2.0e-38	42.7
AUM03463.1\|2016459_2017767_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	1.6e-141	56.7
AUM03464.1\|2017768_2019157_+	hypothetical protein	A0A1B0VMH0	Pseudomonas_phage	5.5e-124	49.5
AUM03465.1\|2019158_2020256_+	hypothetical protein	I6PD76	Cronobacter_phage	1.6e-118	58.5
AUM03466.1\|2020336_2021107_+	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	2.4e-68	60.3
AUM03467.1\|2021118_2022072_+	hypothetical protein	A0A1B0VMF8	Pseudomonas_phage	6.9e-134	75.3
AUM03468.1\|2022389_2022872_+	hypothetical protein	A0A2I7RQ74	Vibrio_phage	3.3e-07	30.6
AUM03469.1\|2022871_2023222_+	hypothetical protein	I6PD77	Cronobacter_phage	1.4e-28	49.6
AUM03470.1\|2023223_2023808_+	hypothetical protein	G8C7Q1	Escherichia_phage	3.2e-49	52.6
AUM03471.1\|2023804_2024215_+	hypothetical protein	I6PDJ8	Cronobacter_phage	8.3e-36	53.6
AUM03472.1\|2024281_2024953_+\|tail	phage tail protein	I6PBN6	Cronobacter_phage	6.1e-52	47.3
AUM03473.1\|2025020_2025332_+	hypothetical protein	I6PDG2	Cronobacter_phage	2.4e-35	68.0
AUM03474.1\|2025328_2025640_+	hypothetical protein	I6PD79	Cronobacter_phage	1.1e-16	63.3
AUM03475.1\|2025639_2028552_+\|tail	phage tail tape measure protein	I6PCW3	Cronobacter_phage	2.0e-131	35.8
AUM03476.1\|2028671_2029028_+	hypothetical protein	NA	NA	NA	NA
AUM03477.1\|2029092_2029440_+\|tail	phage tail protein	I6PBN7	Cronobacter_phage	3.7e-37	60.9
AUM03478.1\|2029436_2030192_+\|tail	phage minor tail protein L	K7PJS0	Enterobacterial_phage	9.4e-118	78.4
AUM03479.1\|2030193_2030916_+	peptidase P60	K7PJV6	Enterobacteria_phage	9.6e-128	83.9
AUM03480.1\|2030915_2031506_+\|tail	phage tail protein	K7PH91	Enterobacterial_phage	3.8e-58	61.7
AUM03481.1\|2031559_2032276_+	methyltransferase	NA	NA	NA	NA
AUM03482.1\|2032329_2035515_+	host specificity protein	O64335	Escherichia_phage	0.0e+00	86.7
AUM03483.1\|2035514_2035817_+	hypothetical protein	K7PHM8	Enterobacterial_phage	4.2e-45	85.9
AUM03484.1\|2035816_2036491_+	hypothetical protein	K7PGX6	Enterobacteria_phage	5.6e-98	80.4
AUM03485.1\|2036601_2036841_+	cor protein	E4WL42	Enterobacteria_phage	1.8e-19	59.7
AUM03486.1\|2036897_2038295_+\|tail	phage tail protein	K7PHF0	Enterobacteria_phage	8.0e-139	58.9
AUM03487.1\|2038446_2038866_+	DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	8.5e-36	57.5
AUM03488.1\|2038868_2040137_+	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	3.1e-230	92.4
AUM03489.1\|2041023_2041251_-	hypothetical protein	NA	NA	NA	NA
AUM03490.1\|2041806_2042025_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	2.1e-17	62.7
AUM03491.1\|2042312_2042525_+	cold-shock protein	NA	NA	NA	NA
AUM03492.1\|2042576_2043239_-	DUF159 family protein	A0A2H4J5W2	uncultured_Caudovirales_phage	2.8e-73	57.8
2050812:2050852	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2120597 : 2130671

Oenococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM03563.1\|2120597_2121812_+	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.1e-46	29.2
AUM03564.1\|2121826_2122846_+	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	1.0e-18	27.0
AUM03565.1\|2122919_2124287_+	MFS transporter	NA	NA	NA	NA
AUM03566.1\|2124506_2125970_+	D-mannonate oxidoreductase	G8DCZ3	Micromonas_pusilla_virus	5.1e-43	31.0
AUM03567.1\|2126013_2126217_-	selenoprotein YdfZ	J9Q802	Salmonella_phage	3.4e-14	58.2
AUM03568.1\|2126505_2126937_+	universal stress protein UspG	A0A1W6JNV4	Morganella_phage	1.1e-17	36.6
AUM03569.1\|2126970_2127657_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUM03570.1\|2127748_2128495_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AUM03571.1\|2128637_2130671_+	dipeptidyl carboxypeptidase II	A0A1V0SIU1	Klosneuvirus	2.1e-18	21.5

DBSCAN-SWA_4

2572404 : 2622988

Erwinia_phage(34.21%)

capsid,plate,terminase,integrase,head,portal,tail,holin,protease

attL 2592020:2592042|attR 2623065:2623087

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM03970.1\|2572404_2573451_-\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	8.1e-19	28.7
AUM03971.1\|2573702_2574464_+	NAD(P)-dependent oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	8.0e-08	23.5
AUM03972.1\|2574460_2575051_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
AUM03973.1\|2575086_2575962_-	23S rRNA pseudouridylate synthase B	NA	NA	NA	NA
AUM03974.1\|2576058_2576679_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
AUM03975.1\|2576675_2577557_-	phosphatase	NA	NA	NA	NA
AUM03976.1\|2577834_2579397_+	anthranilate synthase component I	NA	NA	NA	NA
AUM03977.1\|2579396_2580992_+	bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	2.2e-52	37.9
AUM03978.1\|2580995_2582354_+	bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase	A0A0P0IR83	Acinetobacter_phage	2.5e-36	40.6
AUM03979.1\|2582364_2583558_+	tryptophan synthase subunit beta	NA	NA	NA	NA
AUM03980.1\|2583557_2584367_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
AUM03981.1\|2584547_2585759_+	hypothetical protein	NA	NA	NA	NA
AUM03982.1\|2585755_2585989_+	SirA-like protein	NA	NA	NA	NA
AUM03983.1\|2586115_2586454_+	hypothetical protein	NA	NA	NA	NA
AUM03984.1\|2586500_2587133_-	outer membrane protein OmpW	NA	NA	NA	NA
AUM03985.1\|2587415_2587820_+	zinc/iron-chelating domain-containing protein	NA	NA	NA	NA
AUM03986.1\|2587845_2588589_+	hypothetical protein	NA	NA	NA	NA
AUM03987.1\|2588645_2589185_+	intracellular septation protein A	NA	NA	NA	NA
AUM03988.1\|2589289_2589685_+	acyl-CoA thioesterase	NA	NA	NA	NA
AUM03989.1\|2589724_2590447_-	TonB system transport protein TonB	NA	NA	NA	NA
AUM03990.1\|2590667_2590964_+	hypothetical protein	NA	NA	NA	NA
AUM03991.1\|2591005_2591959_-	MarR family transcriptional regulator	NA	NA	NA	NA
2592020:2592042	attL	NA	NA	NA	NA
AUM03992.1\|2592280_2593000_-	hypothetical protein	NA	NA	NA	NA
AUM03993.1\|2592996_2593836_-	hypothetical protein	NA	NA	NA	NA
AUM05886.1\|2594174_2594573_+	hypothetical protein	NA	NA	NA	NA
AUM03994.1\|2594615_2594837_-	transcriptional regulator	A0A2I8TV89	Erwinia_phage	4.6e-25	72.9
AUM03995.1\|2594913_2596083_-	hypothetical protein	Q6K1G4	Salmonella_virus	1.4e-160	74.9
AUM03996.1\|2596079_2596544_-\|tail	phage tail protein	A0A218M4I2	Erwinia_phage	1.3e-58	70.8
AUM03997.1\|2596556_2599004_-\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	4.6e-299	69.6
AUM03998.1\|2598993_2599116_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	4.2e-12	87.2
AUM03999.1\|2599148_2599454_-	hypothetical protein	A0A0F7LDQ8	Escherichia_phage	1.1e-27	73.6
AUM04000.1\|2599514_2600033_-\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	2.6e-79	82.0
AUM04001.1\|2600045_2601239_-\|tail	phage tail protein	A0A0F7LBW9	Escherichia_phage	3.1e-184	80.4
AUM04002.1\|2601363_2601960_-\|tail	phage tail protein	A0A218M4J2	Erwinia_phage	5.0e-90	83.2
AUM04003.1\|2601959_2602946_-\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	7.1e-142	79.1
AUM04004.1\|2602942_2603551_-\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	1.2e-110	96.0
AUM04005.1\|2603543_2604452_-\|plate	baseplate assembly protein	A0A218M4K5	Erwinia_phage	1.0e-150	93.4
AUM04006.1\|2604458_2604809_-\|plate	baseplate assembly protein	A0A0M4RE59	Salmonella_phage	5.8e-38	69.8
AUM04007.1\|2604805_2605447_-\|plate	baseplate assembly protein	Q6K1H6	Salmonella_virus	2.7e-97	83.1
AUM04008.1\|2605677_2606607_+	TIR domain-containing protein	NA	NA	NA	NA
AUM04009.1\|2606676_2607546_+\|protease	serine protease	NA	NA	NA	NA
AUM04010.1\|2607660_2608107_-	phage virion morphogenesis protein	O80313	Escherichia_phage	3.0e-47	66.0
AUM04011.1\|2608099_2608567_-\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	3.0e-58	69.0
AUM04012.1\|2608529_2608775_-\|holin	holin	S4TNY4	Salmonella_phage	1.0e-28	76.5
AUM04013.1\|2608662_2609088_-	protein lysB	O80310	Escherichia_phage	3.5e-45	69.3
AUM04014.1\|2609084_2609594_-	glycoside hydrolase	A0A218M4K3	Erwinia_phage	1.1e-77	85.7
AUM04015.1\|2609577_2609799_-	primosomal protein	A0A218M4L5	Erwinia_phage	1.1e-26	75.3
AUM04016.1\|2609789_2609993_-\|tail	phage tail protein	A0A218M4L8	Erwinia_phage	1.1e-25	80.6
AUM04017.1\|2609992_2610499_-\|head	head completion/stabilization protein	O80306	Escherichia_phage	1.1e-61	70.8
AUM04018.1\|2610598_2611348_-\|terminase	terminase	O80305	Escherichia_phage	8.8e-76	71.2
AUM04019.1\|2611351_2612419_-\|capsid	phage major capsid protein, P2 family	S4TUA6	Salmonella_phage	2.0e-169	83.1
AUM04020.1\|2612474_2613329_-\|capsid	GPO family capsid scaffolding protein	A0A218M4L9	Erwinia_phage	9.9e-116	72.2
AUM04021.1\|2613495_2615265_+	oxidoreductase	A0A218M4M1	Erwinia_phage	5.1e-300	84.7
AUM04022.1\|2615266_2616292_+\|portal	phage portal protein	Q6K1J0	Salmonella_virus	1.9e-169	83.9
AUM04023.1\|2616639_2617563_-	hypothetical protein	NA	NA	NA	NA
AUM04024.1\|2617656_2619945_-	replication protein	A0A0F7LBQ2	Escherichia_phage	0.0e+00	73.4
AUM04025.1\|2619946_2620210_-	hypothetical protein	U5N3W1	Enterobacteria_phage	1.5e-22	58.1
AUM04026.1\|2620233_2620452_-	hypothetical protein	S4TP68	Salmonella_phage	1.7e-11	66.7
AUM04027.1\|2620518_2621019_-	replication protein B	M1SV55	Escherichia_phage	2.8e-70	75.3
AUM04028.1\|2621185_2621461_-	hypothetical protein	Q1JS60	Enterobacteria_phage	1.2e-41	86.5
AUM04029.1\|2621581_2621881_+	transcriptional regulator	Q1JS61	Enterobacteria_phage	2.2e-38	77.8
AUM04030.1\|2621977_2622988_+\|integrase	integrase	Q83VS6	Escherichia_phage	6.8e-148	75.8
2623065:2623087	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3009438 : 3017385

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM04368.1\|3009438_3010542_-	aminotransferase	E5ES42	Bathycoccus_sp._RCC1105_virus	3.0e-40	32.1
AUM04369.1\|3010997_3011393_-	dTDP-6-deoxy-3,4-keto-hexulose isomerase	NA	NA	NA	NA
AUM04370.1\|3011396_3012260_-	glucose-1-phosphate thymidylyltransferase	A0A291LA53	Escherichia_phage	1.0e-112	68.8
AUM04371.1\|3012259_3013345_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	5.7e-100	51.8
AUM04372.1\|3013697_3014594_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	2.0e-42	41.9
AUM04373.1\|3014809_3015805_-	UDP-N-acetylglucosamine 4-epimerase	A0A0K1L6Z1	Scale_drop_disease_virus	2.1e-08	30.7
AUM04374.1\|3015987_3017385_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.7e-19	32.8

DBSCAN-SWA_6

3966724 : 4008122

Erwinia_phage(44.12%)

plate,tRNA,tail,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM05917.1\|3966724_3967966_+\|tRNA	multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	A0A0F6YPT7	Sinorhizobium_phage	1.3e-92	51.4
AUM05187.1\|3967976_3968798_-	undecaprenyl-diphosphatase	NA	NA	NA	NA
AUM05188.1\|3968904_3969273_-	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase	NA	NA	NA	NA
AUM05189.1\|3969380_3970001_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AUM05190.1\|3970086_3971553_+	MFS transporter	NA	NA	NA	NA
AUM05191.1\|3971593_3972016_-	MarR family transcriptional regulator	NA	NA	NA	NA
AUM05192.1\|3972163_3973177_+	alpha/beta hydrolase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	1.4e-55	38.8
AUM05193.1\|3973321_3974149_+	urease accessory protein	NA	NA	NA	NA
AUM05194.1\|3974159_3974462_+	urease subunit gamma	NA	NA	NA	NA
AUM05195.1\|3974472_3974787_+	urease subunit beta	NA	NA	NA	NA
AUM05196.1\|3974779_3976483_+	urease subunit alpha	NA	NA	NA	NA
AUM05197.1\|3976492_3976957_+	urease accessory protein UreE	NA	NA	NA	NA
AUM05198.1\|3976966_3977506_+	urease accessory protein UreJ	NA	NA	NA	NA
AUM05199.1\|3977505_3978180_+	urease accessory protein UreF	NA	NA	NA	NA
AUM05200.1\|3978189_3978807_+	urease accessory protein UreG	NA	NA	NA	NA
AUM05201.1\|3978851_3979865_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.8e-109	58.6
AUM05202.1\|3980101_3980317_+	30S ribosomal protein S21	NA	NA	NA	NA
AUM05203.1\|3980432_3982178_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.4e-76	39.0
AUM05204.1\|3982195_3982315_+	RNA polymerase subunit sigma	NA	NA	NA	NA
AUM05205.1\|3982331_3984179_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
AUM05206.1\|3984280_3984787_-	mismatch-specific DNA-glycosylase	NA	NA	NA	NA
AUM05207.1\|3985069_3985270_-	late control protein B	A0A2I8TV89	Erwinia_phage	6.3e-21	79.6
AUM05208.1\|3985337_3986492_-	hypothetical protein	A0A0M5M5V5	Salmonella_phage	1.5e-130	62.0
AUM05209.1\|3986488_3986953_-\|tail	phage tail protein	O80317	Escherichia_phage	6.9e-55	66.7
AUM05210.1\|3986964_3989244_-\|tail	phage tail tape measure protein	Q7Y4C8	Escherichia_virus	5.9e-131	39.9
AUM05918.1\|3989236_3989356_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	9.7e-14	89.7
AUM05211.1\|3989388_3989697_-	hypothetical protein	A0A0F7LDQ8	Escherichia_phage	4.5e-26	69.0
AUM05212.1\|3989753_3990272_-\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	7.7e-79	80.8
AUM05213.1\|3990283_3991471_-\|tail	phage tail protein	S4TRX2	Salmonella_phage	6.1e-188	83.3
AUM05214.1\|3991529_3992123_-	DNA-invertase	A0A0F7LA37	Escherichia_phage	1.4e-79	75.0
AUM05215.1\|3992565_3992961_+\|tail	phage tail protein	A0A2P1JUG3	Erwinia_phage	3.6e-12	35.4
AUM05216.1\|3992944_3993541_-\|tail	phage tail protein	A0A218M4J2	Erwinia_phage	4.7e-64	58.9
AUM05217.1\|3993540_3994623_-\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	4.8e-123	66.4
AUM05218.1\|3994619_3995228_-\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	1.9e-100	88.1
AUM05219.1\|3995220_3996129_-\|plate	baseplate assembly protein	A0A218M4K5	Erwinia_phage	1.4e-139	85.8
AUM05220.1\|3996134_3996485_-\|plate	baseplate assembly protein	A0A0M4RE59	Salmonella_phage	5.2e-39	69.8
AUM05221.1\|3996481_3997123_-\|plate	baseplate assembly protein	A0A0M4S6F6	Salmonella_phage	2.3e-88	76.5
AUM05222.1\|3997235_3997703_-\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	4.0e-50	61.9
AUM05223.1\|3997665_3997839_-\|lysis	phage lysis protein	S4TNY4	Salmonella_phage	8.1e-17	74.5
AUM05224.1\|3997798_3998326_-	protein lysB	A0A218M4K2	Erwinia_phage	7.2e-32	57.5
AUM05225.1\|3998220_3998730_-	glycoside hydrolase	A0A218M4K3	Erwinia_phage	3.3e-74	82.1
AUM05226.1\|3998713_3998935_-	primosomal protein	A0A218M4L5	Erwinia_phage	4.6e-25	75.0
AUM05227.1\|3998925_3999129_-\|tail	phage tail protein	U5N3E7	Enterobacteria_phage	4.0e-23	71.6
AUM05228.1\|3999308_3999749_-	DinI family protein	A0A218M4I0	Erwinia_phage	5.2e-52	75.2
AUM05229.1\|3999858_4002048_-	replication protein	A0A218M4H2	Erwinia_phage	0.0e+00	73.3
AUM05230.1\|4002049_4002271_-	hypothetical protein	A0A0M4S5Q7	Salmonella_phage	1.2e-25	76.4
AUM05231.1\|4002270_4002498_-	hypothetical protein	A0A0M3UL87	Salmonella_phage	9.9e-15	64.0
AUM05232.1\|4002566_4002905_-	hypothetical protein	A0A218M4I7	Erwinia_phage	5.1e-39	73.9
AUM05233.1\|4003132_4003708_+	phage repressor protein CI	A0A218M4J1	Erwinia_phage	1.7e-66	62.8
AUM05234.1\|4003990_4005160_+	DNA repair protein	NA	NA	NA	NA
AUM05235.1\|4005160_4005925_-	siderophore-interacting protein	NA	NA	NA	NA
AUM05236.1\|4006071_4006566_+	PadR family transcriptional regulator	NA	NA	NA	NA
AUM05237.1\|4006562_4008122_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-11	29.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP020817

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection