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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025582 Lactobacillus paracasei strain HD1.7 chromosome, complete genome 5 crisprs NA 0 15 0 0

Results visualization

1. CP025582
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025582_1 260598-260739 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025582_2 663250-663358 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025582_3 752002-752129 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025582_4 1928246-1928363 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025582_5 2306793-2308940 Orphan NA
32 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP025582_5 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308347-2308376 30 NZ_HG938356 Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence 142195-142224 4 0.867
CP025582_5 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308347-2308376 30 NZ_CP035515 Haematobacter massiliensis strain OT1 plasmid pOT1-5, complete sequence 9304-9333 4 0.867
CP025582_5 5.4|2307027|30|CP025582|CRISPRCasFinder,CRT 2307027-2307056 30 NZ_CP012103 Bacillus thuringiensis strain HS18-1 plasmid pHS18-4, complete sequence 66757-66786 5 0.833
CP025582_5 5.9|2307357|30|CP025582|CRISPRCasFinder,CRT 2307357-2307386 30 MK448932 Streptococcus phage Javan42, complete genome 35485-35514 5 0.833
CP025582_5 5.9|2307357|30|CP025582|CRISPRCasFinder,CRT 2307357-2307386 30 MK448692 Streptococcus phage Javan173, complete genome 44438-44467 5 0.833
CP025582_5 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308809-2308838 30 NZ_KY940428 UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence 115751-115780 5 0.833
CP025582_5 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308809-2308838 30 NZ_CP041978 Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence 20737-20766 5 0.833
CP025582_5 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308809-2308838 30 NC_011655 Bacillus cereus AH187 plasmid pAH187_270, complete sequence 91374-91403 5 0.833
CP025582_5 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308809-2308838 30 NC_010924 Bacillus cereus strain AH187 plasmid pCER270, complete sequence 147783-147812 5 0.833
CP025582_5 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308809-2308838 30 CP045776 Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence 137098-137127 5 0.833
CP025582_5 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308809-2308838 30 NZ_CP042928 Bacillus cereus strain G1-1 plasmid unnamed, complete sequence 122064-122093 5 0.833
CP025582_5 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308809-2308838 30 CP041980 Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence 5134-5163 5 0.833
CP025582_5 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308809-2308838 30 NC_016792 Bacillus cereus NC7401 plasmid pNCcld, complete sequence 146652-146681 5 0.833
CP025582_5 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308809-2308838 30 NZ_CP040343 Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence 157214-157243 5 0.833
CP025582_5 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308809-2308838 30 NZ_CP040341 Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence 181186-181215 5 0.833
CP025582_5 5.4|2307027|30|CP025582|CRISPRCasFinder,CRT 2307027-2307056 30 NZ_CP012101 Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence 30465-30494 6 0.8
CP025582_5 5.9|2307357|30|CP025582|CRISPRCasFinder,CRT 2307357-2307386 30 MK448990 Streptococcus phage Javan584, complete genome 42282-42311 6 0.8
CP025582_5 5.14|2307687|30|CP025582|CRISPRCasFinder,CRT 2307687-2307716 30 NZ_CP014508 Burkholderia sp. PAMC 28687 plasmid 1, complete sequence 146613-146642 6 0.8
CP025582_5 5.14|2307687|30|CP025582|CRISPRCasFinder,CRT 2307687-2307716 30 KX397366 Erwinia phage vB_EamM_ChrisDB, complete genome 35108-35137 6 0.8
CP025582_5 5.18|2307951|30|CP025582|CRISPRCasFinder,CRT 2307951-2307980 30 NZ_CP039899 Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877a, complete sequence 69980-70009 6 0.8
CP025582_5 5.18|2307951|30|CP025582|CRISPRCasFinder,CRT 2307951-2307980 30 NZ_CP053858 Rhizobium pusense strain 76 plasmid pR76, complete sequence 196322-196351 6 0.8
CP025582_5 5.18|2307951|30|CP025582|CRISPRCasFinder,CRT 2307951-2307980 30 NZ_CP039890 Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499a, complete sequence 69980-70009 6 0.8
CP025582_5 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308347-2308376 30 MN234226 Mycobacterium phage Curiosium, complete genome 19865-19894 6 0.8
CP025582_5 5.30|2308743|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308743-2308772 30 NZ_CP013746 Arthrobacter alpinus strain A3 plasmid unnamed, complete sequence 117714-117743 6 0.8
CP025582_5 5.32|2308875|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308875-2308904 30 MF001355 Proteus phage PM2, partial genome 135685-135714 6 0.8
CP025582_5 5.2|2306895|30|CP025582|CRISPRCasFinder,CRT 2306895-2306924 30 MT774411 CrAssphage cr273_1, complete genome 89800-89829 7 0.767
CP025582_5 5.2|2306895|30|CP025582|CRISPRCasFinder,CRT 2306895-2306924 30 MT774410 CrAssphage cr272_1, complete genome 43072-43101 7 0.767
CP025582_5 5.17|2307885|30|CP025582|CRISPRCasFinder,CRT 2307885-2307914 30 NZ_CP042276 Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence 325018-325047 7 0.767
CP025582_5 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308347-2308376 30 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 129041-129070 7 0.767
CP025582_5 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308347-2308376 30 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 1684078-1684107 7 0.767
CP025582_5 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308347-2308376 30 NC_008010 Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence 272092-272121 7 0.767
CP025582_5 5.30|2308743|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308743-2308772 30 NZ_CP049249 Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence 190932-190961 7 0.767
CP025582_5 5.1|2306829|30|CP025582|CRISPRCasFinder,CRT 2306829-2306858 30 MN694775 Marine virus AFVG_250M170, complete genome 38416-38445 8 0.733
CP025582_5 5.1|2306829|30|CP025582|CRISPRCasFinder,CRT 2306829-2306858 30 MN694117 Marine virus AFVG_250M169, complete genome 15403-15432 8 0.733
CP025582_5 5.1|2306829|30|CP025582|CRISPRCasFinder,CRT 2306829-2306858 30 MN693887 Marine virus AFVG_250M171, complete genome 15405-15434 8 0.733
CP025582_5 5.9|2307357|30|CP025582|CRISPRCasFinder,CRT 2307357-2307386 30 MK448998 Streptococcus phage Javan636, complete genome 33583-33612 8 0.733
CP025582_5 5.11|2307489|30|CP025582|CRISPRCasFinder,CRT 2307489-2307518 30 NZ_AP017976 Microbacterium sp. TPU 3598 plasmid MST3P, complete sequence 16443-16472 8 0.733
CP025582_5 5.14|2307687|30|CP025582|CRISPRCasFinder,CRT 2307687-2307716 30 NZ_CP030354 Novosphingobium sp. P6W plasmid pP6W1, complete sequence 402828-402857 8 0.733
CP025582_5 5.16|2307819|30|CP025582|CRISPRCasFinder,CRT 2307819-2307848 30 MN813686 Mycobacterium phage BirdsNest, complete genome 13514-13543 8 0.733
CP025582_5 5.17|2307885|30|CP025582|CRISPRCasFinder,CRT 2307885-2307914 30 NZ_CP017422 Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence 143059-143088 8 0.733
CP025582_5 5.19|2308017|30|CP025582|CRISPRCasFinder,CRT 2308017-2308046 30 NZ_CP046333 Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3 948273-948302 8 0.733
CP025582_5 5.19|2308017|30|CP025582|CRISPRCasFinder,CRT 2308017-2308046 30 NC_009339 Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence 319388-319417 8 0.733
CP025582_5 5.19|2308017|30|CP025582|CRISPRCasFinder,CRT 2308017-2308046 30 NC_007974 Cupriavidus metallidurans CH34 megaplasmid, complete sequence 98949-98978 8 0.733
CP025582_5 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308809-2308838 30 MK448986 Streptococcus phage Javan570, complete genome 18014-18043 8 0.733
CP025582_5 5.32|2308875|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308875-2308904 30 AP013379 Uncultured Mediterranean phage uvMED DNA, complete genome, group G14, isolate: uvMED-CGR-U-MedDCM-OCT-S28-C43 16218-16247 8 0.733
CP025582_5 5.32|2308875|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308875-2308904 30 AP014417 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S39-C59, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces 2676-2705 8 0.733
CP025582_5 5.32|2308875|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308875-2308904 30 MN855989 Bacteriophage sp. isolate 357, complete genome 844-873 8 0.733
CP025582_5 5.32|2308875|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308875-2308904 30 MF417937 Uncultured Caudovirales phage clone 10F_6, partial genome 13530-13559 8 0.733
CP025582_5 5.32|2308875|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308875-2308904 30 MN715150 Citrobacter phage NS1, complete genome 17279-17308 8 0.733
CP025582_5 5.13|2307621|30|CP025582|CRISPRCasFinder,CRT 2307621-2307650 30 NZ_CP019904 Escherichia coli strain MDR_56 plasmid unnamed1, complete sequence 14967-14996 9 0.7
CP025582_5 5.19|2308017|30|CP025582|CRISPRCasFinder,CRT 2308017-2308046 30 CP053919 Serratia marcescens strain LY1 plasmid unnamed1, complete sequence 48844-48873 9 0.7
CP025582_5 5.19|2308017|30|CP025582|CRISPRCasFinder,CRT 2308017-2308046 30 NZ_AP013065 Serratia marcescens SM39 plasmid pSMC2, complete sequence 47904-47933 9 0.7
CP025582_5 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308347-2308376 30 AY328853 Vibrio parahaemolyticus phage VP16C, partial sequence 42777-42806 9 0.7
CP025582_5 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR 2308347-2308376 30 KF854250 UNVERIFIED: Vibrio phage VP_EVC_2013, partial genome 42682-42711 9 0.7

1. spacer 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 4, identity: 0.867

caatgacc-ccgcgcagtggcagccgatcaa	CRISPR spacer
-gatgaccagcgcgcaggggcagccgatcaa	Protospacer
 .******  ******* *************

2. spacer 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035515 (Haematobacter massiliensis strain OT1 plasmid pOT1-5, complete sequence) position: , mismatch: 4, identity: 0.867

caatgacc-ccgcgcagtggcagccgatcaa	CRISPR spacer
-gatgaccaacgcgcaggggcagccgatcaa	Protospacer
 .******  ******* *************

3. spacer 5.4|2307027|30|CP025582|CRISPRCasFinder,CRT matches to NZ_CP012103 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-4, complete sequence) position: , mismatch: 5, identity: 0.833

ccacgttccaaagtgtattttgttgtcaca-	CRISPR spacer
taatgttcaaaagtgtattttgttgt-acat	Protospacer
. *.**** ***************** *** 

4. spacer 5.9|2307357|30|CP025582|CRISPRCasFinder,CRT matches to MK448932 (Streptococcus phage Javan42, complete genome) position: , mismatch: 5, identity: 0.833

gttggcggtgcggtttatgactatgctgcg	CRISPR spacer
gcaggcggtgcagtgtatgactatgctgct	Protospacer
*. ********.** ************** 

5. spacer 5.9|2307357|30|CP025582|CRISPRCasFinder,CRT matches to MK448692 (Streptococcus phage Javan173, complete genome) position: , mismatch: 5, identity: 0.833

gttggcggtgcggtttatgactatgctgcg	CRISPR spacer
gcaggcggtgcagtctatgactatgctgca	Protospacer
*. ********.**.**************.

6. spacer 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY940428 (UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence) position: , mismatch: 5, identity: 0.833

-gtaaaacatccaacatgtagcgtttaacca	CRISPR spacer
aatagaac-tccaatatgtagcgtttaaccg	Protospacer
 .**.*** *****.***************.

7. spacer 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041978 (Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

-gtaaaacatccaacatgtagcgtttaacca	CRISPR spacer
aatagaac-tccaatatgtagcgtttaaccg	Protospacer
 .**.*** *****.***************.

8. spacer 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NC_011655 (Bacillus cereus AH187 plasmid pAH187_270, complete sequence) position: , mismatch: 5, identity: 0.833

-gtaaaacatccaacatgtagcgtttaacca	CRISPR spacer
aatagaac-tccaatatgtagcgtttaaccg	Protospacer
 .**.*** *****.***************.

9. spacer 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NC_010924 (Bacillus cereus strain AH187 plasmid pCER270, complete sequence) position: , mismatch: 5, identity: 0.833

-gtaaaacatccaacatgtagcgtttaacca	CRISPR spacer
aatagaac-tccaatatgtagcgtttaaccg	Protospacer
 .**.*** *****.***************.

10. spacer 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to CP045776 (Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence) position: , mismatch: 5, identity: 0.833

-gtaaaacatccaacatgtagcgtttaacca	CRISPR spacer
aatagaac-tccaatatgtagcgtttaaccg	Protospacer
 .**.*** *****.***************.

11. spacer 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042928 (Bacillus cereus strain G1-1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

-gtaaaacatccaacatgtagcgtttaacca	CRISPR spacer
aatagaac-tccaatatgtagcgtttaaccg	Protospacer
 .**.*** *****.***************.

12. spacer 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to CP041980 (Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

-gtaaaacatccaacatgtagcgtttaacca	CRISPR spacer
aatagaac-tccaatatgtagcgtttaaccg	Protospacer
 .**.*** *****.***************.

13. spacer 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NC_016792 (Bacillus cereus NC7401 plasmid pNCcld, complete sequence) position: , mismatch: 5, identity: 0.833

-gtaaaacatccaacatgtagcgtttaacca	CRISPR spacer
aatagaac-tccaatatgtagcgtttaaccg	Protospacer
 .**.*** *****.***************.

14. spacer 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040343 (Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

-gtaaaacatccaacatgtagcgtttaacca	CRISPR spacer
aatagaac-tccaatatgtagcgtttaaccg	Protospacer
 .**.*** *****.***************.

15. spacer 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040341 (Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

-gtaaaacatccaacatgtagcgtttaacca	CRISPR spacer
aatagaac-tccaatatgtagcgtttaaccg	Protospacer
 .**.*** *****.***************.

16. spacer 5.4|2307027|30|CP025582|CRISPRCasFinder,CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 6, identity: 0.8

ccacgttccaaagtgtattttgttgtcaca-	CRISPR spacer
taatattcaaaagtgtattttgttgt-acat	Protospacer
. *..*** ***************** *** 

17. spacer 5.9|2307357|30|CP025582|CRISPRCasFinder,CRT matches to MK448990 (Streptococcus phage Javan584, complete genome) position: , mismatch: 6, identity: 0.8

gttggcggtgcggtttatgactatgctgcg	CRISPR spacer
aaaggcggtgcagtctatgactatgctgct	Protospacer
.  ********.**.************** 

18. spacer 5.14|2307687|30|CP025582|CRISPRCasFinder,CRT matches to NZ_CP014508 (Burkholderia sp. PAMC 28687 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.8

--aatcggtgtcaccaagatgcgcaagcaacc	CRISPR spacer
gcagtc--tgtcaccaagatgctcaagcaaag	Protospacer
  *.**  ************** *******  

19. spacer 5.14|2307687|30|CP025582|CRISPRCasFinder,CRT matches to KX397366 (Erwinia phage vB_EamM_ChrisDB, complete genome) position: , mismatch: 6, identity: 0.8

aatcggtgtcaccaagatgcgcaagcaacc	CRISPR spacer
acacgacgtcaccaagaaccgcaagcaacc	Protospacer
*  **..**********  ***********

20. spacer 5.18|2307951|30|CP025582|CRISPRCasFinder,CRT matches to NZ_CP039899 (Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877a, complete sequence) position: , mismatch: 6, identity: 0.8

-cgtttgattccgtttttcgtcctgctttct	CRISPR spacer
acgtgt-cttccgtttttcgtcctgttttgg	Protospacer
 *** *  *****************.***  

21. spacer 5.18|2307951|30|CP025582|CRISPRCasFinder,CRT matches to NZ_CP053858 (Rhizobium pusense strain 76 plasmid pR76, complete sequence) position: , mismatch: 6, identity: 0.8

-cgtttgattccgtttttcgtcctgctttct	CRISPR spacer
acgtgt-cttccgtttttcgtcctgttttgg	Protospacer
 *** *  *****************.***  

22. spacer 5.18|2307951|30|CP025582|CRISPRCasFinder,CRT matches to NZ_CP039890 (Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499a, complete sequence) position: , mismatch: 6, identity: 0.8

-cgtttgattccgtttttcgtcctgctttct	CRISPR spacer
acgtgt-cttccgtttttcgtcctgttttgg	Protospacer
 *** *  *****************.***  

23. spacer 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to MN234226 (Mycobacterium phage Curiosium, complete genome) position: , mismatch: 6, identity: 0.8

caatgaccccgcgcagtggcagccgatcaa	CRISPR spacer
caccggccccgcgcagcggcagccgatcct	Protospacer
** .*.**********.***********  

24. spacer 5.30|2308743|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013746 (Arthrobacter alpinus strain A3 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

--cggcttgtcctattcttcaatctcgttcta	CRISPR spacer
aacgg--tgtcctattcatcaatctcgtcccg	Protospacer
  ***  ********** **********.*..

25. spacer 5.32|2308875|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to MF001355 (Proteus phage PM2, partial genome) position: , mismatch: 6, identity: 0.8

gcatgacgagaagaaaacaaagctttaagt	CRISPR spacer
tcaccaagagaactaaacaaagctttaagt	Protospacer
 **. * *****  ****************

26. spacer 5.2|2306895|30|CP025582|CRISPRCasFinder,CRT matches to MT774411 (CrAssphage cr273_1, complete genome) position: , mismatch: 7, identity: 0.767

gataccaacatgtaaatgatatgaagctaa	CRISPR spacer
aaaaacaacaagtaaatgatatgaagaaga	Protospacer
.* * ***** ***************  .*

27. spacer 5.2|2306895|30|CP025582|CRISPRCasFinder,CRT matches to MT774410 (CrAssphage cr272_1, complete genome) position: , mismatch: 7, identity: 0.767

gataccaacatgtaaatgatatgaagctaa	CRISPR spacer
aaaaacaacaagtaaatgatatgaagaaga	Protospacer
.* * ***** ***************  .*

28. spacer 5.17|2307885|30|CP025582|CRISPRCasFinder,CRT matches to NZ_CP042276 (Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence) position: , mismatch: 7, identity: 0.767

cgcatcgtcatcacccgaacgaccagcttc	CRISPR spacer
tccatcatcatcacccgaacgacaatatta	Protospacer
. ****.**************** *  ** 

29. spacer 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 7, identity: 0.767

caatgaccccgcgcagtggcagccgatcaa	CRISPR spacer
caccaggcccgcgcagtggccgccgatcat	Protospacer
** ... ************* ******** 

30. spacer 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 7, identity: 0.767

caatgaccccgcgcagtggcagccgatcaa	CRISPR spacer
caccaggcccgcgcagtggccgccgatcat	Protospacer
** ... ************* ******** 

31. spacer 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NC_008010 (Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence) position: , mismatch: 7, identity: 0.767

caatgaccccgcgcagtggcagccgatcaa	CRISPR spacer
cagcaccagcgcgcaggggcagccgatcaa	Protospacer
**... *  ******* *************

32. spacer 5.30|2308743|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

cggcttgtcctattcttcaatctcgttcta	CRISPR spacer
gcacctgtcattttcttcaatctcgttctg	Protospacer
  .*.**** * *****************.

33. spacer 5.1|2306829|30|CP025582|CRISPRCasFinder,CRT matches to MN694775 (Marine virus AFVG_250M170, complete genome) position: , mismatch: 8, identity: 0.733

tgtcacatcaagctgttgttgttgttcttg	CRISPR spacer
caaagcttcaatctgttcttgttgttcttg	Protospacer
..  .* **** ***** ************

34. spacer 5.1|2306829|30|CP025582|CRISPRCasFinder,CRT matches to MN694117 (Marine virus AFVG_250M169, complete genome) position: , mismatch: 8, identity: 0.733

tgtcacatcaagctgttgttgttgttcttg	CRISPR spacer
caaagcttcaatctgttcttgttgttcttg	Protospacer
..  .* **** ***** ************

35. spacer 5.1|2306829|30|CP025582|CRISPRCasFinder,CRT matches to MN693887 (Marine virus AFVG_250M171, complete genome) position: , mismatch: 8, identity: 0.733

tgtcacatcaagctgttgttgttgttcttg	CRISPR spacer
caaagcttcaatctgttcttgttgttcttg	Protospacer
..  .* **** ***** ************

36. spacer 5.9|2307357|30|CP025582|CRISPRCasFinder,CRT matches to MK448998 (Streptococcus phage Javan636, complete genome) position: , mismatch: 8, identity: 0.733

gttggcggtgcggtttatgactatgctgcg	CRISPR spacer
tatggcggtgcgacttatgactatgccata	Protospacer
  **********..************....

37. spacer 5.11|2307489|30|CP025582|CRISPRCasFinder,CRT matches to NZ_AP017976 (Microbacterium sp. TPU 3598 plasmid MST3P, complete sequence) position: , mismatch: 8, identity: 0.733

cgtgtcgtttggattgccttgagagatcca	CRISPR spacer
cgtgccgtttggattgccttgaggtcagtg	Protospacer
****.******************.    ..

38. spacer 5.14|2307687|30|CP025582|CRISPRCasFinder,CRT matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 8, identity: 0.733

aatcggtgtcaccaagatgcgcaagcaacc	CRISPR spacer
agccggcgtcaccaagatgctcaagctggt	Protospacer
*..***.************* ***** . .

39. spacer 5.16|2307819|30|CP025582|CRISPRCasFinder,CRT matches to MN813686 (Mycobacterium phage BirdsNest, complete genome) position: , mismatch: 8, identity: 0.733

atgctgacacgggcgcagaggcgttttcta	CRISPR spacer
gcgctgacacgggcgcagcggcgcggacga	Protospacer
..**************** ****.   * *

40. spacer 5.17|2307885|30|CP025582|CRISPRCasFinder,CRT matches to NZ_CP017422 (Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence) position: , mismatch: 8, identity: 0.733

cgcatcgtcatcacccgaacgaccagcttc	CRISPR spacer
tcaatcgtcatctccggaacgaccagcaag	Protospacer
.  ********* ** ***********   

41. spacer 5.19|2308017|30|CP025582|CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 8, identity: 0.733

atcggtggccgctaacgccacgctggtgtc	CRISPR spacer
cgggctggccgctaccggcacgctggtgct	Protospacer
   * ********* ** **********..

42. spacer 5.19|2308017|30|CP025582|CRISPRCasFinder,CRT matches to NC_009339 (Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence) position: , mismatch: 8, identity: 0.733

atcggtggccgctaacgccacgctggtgtc	CRISPR spacer
tacatccgccgctatcaccacgctggtgtc	Protospacer
  *. . ******* *.*************

43. spacer 5.19|2308017|30|CP025582|CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.733

atcggtggccgctaacgccacgctggtgtc	CRISPR spacer
cgggctggccgctaccggcacgctggtgct	Protospacer
   * ********* ** **********..

44. spacer 5.31|2308809|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to MK448986 (Streptococcus phage Javan570, complete genome) position: , mismatch: 8, identity: 0.733

gtaaaacatccaacatgtagcgtttaacca	CRISPR spacer
tcatctcatccaacctgtagcgtttatcct	Protospacer
 .*   ******** *********** ** 

45. spacer 5.32|2308875|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to AP013379 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G14, isolate: uvMED-CGR-U-MedDCM-OCT-S28-C43) position: , mismatch: 8, identity: 0.733

gcatgacgagaagaaaacaaagctttaagt	CRISPR spacer
ttacttgcagaagaaaacaaagatttaagt	Protospacer
 .*.    ************** *******

46. spacer 5.32|2308875|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to AP014417 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S39-C59, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 8, identity: 0.733

gcatgacgagaagaaaacaaagctttaagt	CRISPR spacer
aatcaacgagaataaaacaaagttttaagc	Protospacer
.  ..******* *********.******.

47. spacer 5.32|2308875|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to MN855989 (Bacteriophage sp. isolate 357, complete genome) position: , mismatch: 8, identity: 0.733

gcatgacgagaagaaaacaaagctttaagt	CRISPR spacer
cagttagaagaagacaacaaagctttaaga	Protospacer
  .* * .****** ************** 

48. spacer 5.32|2308875|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to MF417937 (Uncultured Caudovirales phage clone 10F_6, partial genome) position: , mismatch: 8, identity: 0.733

gcatgacgagaagaaaacaaagctttaagt	CRISPR spacer
gagttgtcagaagaaaacaaagatttaaga	Protospacer
* .* .. ************** ****** 

49. spacer 5.32|2308875|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to MN715150 (Citrobacter phage NS1, complete genome) position: , mismatch: 8, identity: 0.733

gcatgacgagaagaaaacaaagctttaagt	CRISPR spacer
atctgacgagaagaaaacgaagcgttccgg	Protospacer
.. ***************.**** **  * 

50. spacer 5.13|2307621|30|CP025582|CRISPRCasFinder,CRT matches to NZ_CP019904 (Escherichia coli strain MDR_56 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

tacctccgttaaaatctcataaatgaatta	CRISPR spacer
ctaatccgtgaaaatctcagaaatgaaggc	Protospacer
.   ***** ********* *******   

51. spacer 5.19|2308017|30|CP025582|CRISPRCasFinder,CRT matches to CP053919 (Serratia marcescens strain LY1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

atcggtggccgctaacgccacgctggtgtc	CRISPR spacer
tgcggtggtggctaacgccacgctgagcaa	Protospacer
  ******. ***************.    

52. spacer 5.19|2308017|30|CP025582|CRISPRCasFinder,CRT matches to NZ_AP013065 (Serratia marcescens SM39 plasmid pSMC2, complete sequence) position: , mismatch: 9, identity: 0.7

atcggtggccgctaacgccacgctggtgtc	CRISPR spacer
tgcggtggtggctaacgccacgctgagcaa	Protospacer
  ******. ***************.    

53. spacer 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to AY328853 (Vibrio parahaemolyticus phage VP16C, partial sequence) position: , mismatch: 9, identity: 0.7

caatgaccccgcgcagtggcagccgatcaa	CRISPR spacer
ggggttcgacgcgcactggcagccgatcaa	Protospacer
 ..   *  ****** **************

54. spacer 5.24|2308347|30|CP025582|CRISPRCasFinder,CRT,PILER-CR matches to KF854250 (UNVERIFIED: Vibrio phage VP_EVC_2013, partial genome) position: , mismatch: 9, identity: 0.7

caatgaccccgcgcagtggcagccgatcaa	CRISPR spacer
ggggttcgacgcgcactggcagccgatcaa	Protospacer
 ..   *  ****** **************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage