CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP032839	Aeromonas veronii strain FC951 chromosome, complete genome	9 crisprs	csa3,DEDDh,DinG,cas3,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,PD-DExK	0	25	11	0
CP032840	Aeromonas veronii strain FC951 plasmid unnamed	1 crisprs	DEDDh	1	1	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP032839_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032839_1

312283-312368

Orphan

Consensus_repeat	Method
TTTGTGTGTTTTGTGCCTTTTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032839_1

>merge|CP032839|1|312283-312368|CRISPRCasFinder
TTTGTGTGTTTTGTGCCTTTTTGTTTTTTGATACACAACCCGCAAGGTACGCCACCACTGGGTTTAGCGTGTTTTTTGTGTGTTTT

>CP032839|1|1|312283-312368|CRISPRCasFinder
TTTGTGTGTTTTGTGCCTTTTTG	TTTTTTGATACACAACCCGCAAGGTACGCCACCACTGGGT
TTAGCGTGTTTTTTGTGTGTTTT

Protein	Signature genes	Signature genes Name	Protein_function
CP032839.1\|AYK20146.1\|309637_309853_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK16742.1\|314083_314332_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK16738.1\|310572_312126_+\|DUF3987-domain-containing-protein	unknown	unknown	gnl\|CDD\|379041
CP032839.1\|AYK16743.1\|315076_316285_+\|DUF4102-domain-containing-protein	unknown	unknown	gnl\|CDD\|170049
CP032839.1\|AYK16739.1\|312649_313267_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK20145.1\|306857_307484_-\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
CP032839.1\|AYK16744.1\|316585_317914_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|379017
CP032839.1\|AYK16741.1\|313825_314074_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK16745.1\|317967_318177_+\|AlpA-family-phage-regulatory-protein	unknown	unknown	gnl\|CDD\|283558
CP032839.1\|AYK16735.1\|307788_308760_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271177
CP032839.1\|AYK16746.1\|318187_318619_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK16736.1\|310044_310395_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK16734.1\|305712_306783_+\|lipopolysaccharide-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
CP032839.1\|AYK20144.1\|304580_305687_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|275200
CP032839.1\|AYK16733.1\|302893_304402_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
CP032839.1\|AYK16747.1\|319270_319525_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK16748.1\|319669_320026_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK16732.1\|302263_302719_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|377329
CP032839.1\|AYK16737.1\|310387_310576_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK16740.1\|313269_313671_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP032839.1\|AYK16732.1\|302263_302719_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|377329	pfam04364, DNA_pol3_chi, DNA polymerase III chi subunit, HolC. The DNA polymerase III holoenzyme (EC:2.7.7.7) is the polymerase responsible for the replication of the Escherichia coli chromosome. The holoenzyme is composed of the DNA polymerase III core, the sliding clamp, and the DnaX clamp loading complex. The DnaX complex contains either either the tau or gamma product of gene dnax, complexed to delta.delta' and to chi psi. Chi forms a 1:1 heterodimer with psi. The chi psi complex functions by increasing the affinity of tau and gamma for delta.delta' allowing a functional clamp-loading complex to form at physiological subunit concentrations. Psi is responsible for the interaction with DnaX (gamma/tau), but psi is insoluble unless it is in a complex with chi.	1.46119e-46
CP032839.1\|AYK16744.1\|316585_317914_+\|IS4-family-transposase	gnl\|CDD\|379017	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal. This family represents the N-terminal region of proteins carrying the transposase enzyme, DDE_Tnp_1 (that was Transposase_11), pfam01609, at the C-terminus. The full-length members are Insertion Element 4, IS4. Within the collection of E.coli strains, ECOR, the number of IS4 elements varies from zero to 14, with an average of 5 copies/strain.	9.83647e-26
CP032839.1\|AYK16733.1\|302893_304402_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
CP032839.1\|AYK16738.1\|310572_312126_+\|DUF3987-domain-containing-protein	gnl\|CDD\|379041	pfam13148, DUF3987, Protein of unknown function (DUF3987). A family of uncharacterized proteins found by clustering human gut metagenomic sequences.	1.13183e-16
CP032839.1\|AYK16743.1\|315076_316285_+\|DUF4102-domain-containing-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	2.05526e-94
CP032839.1\|AYK20144.1\|304580_305687_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|275200	TIGR04407, LptF_YjgP, LPS export ABC transporter permease LptF. Members of this family are LptF, one of homologous, two tandem-encoded permease genes of an export ATP transporter for lipopolysaccharide (LPS) assembly in most Gram-negative bacteria. The other permease subunit is LptG (TIGR04408). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	3.27937e-122
CP032839.1\|AYK20145.1\|306857_307484_-\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	1.42753e-15
CP032839.1\|AYK16734.1\|305712_306783_+\|lipopolysaccharide-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
CP032839.1\|AYK16735.1\|307788_308760_+\|site-specific-integrase	gnl\|CDD\|271177	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain. Rci protein is a tyrosine recombinase specifically involved in Shufflon type of DNA rearrangement in bacteria. The shufflon of plasmid R64 consists of four invertible DNA segments which are separated and flanked by seven 19-bp repeat sequences. RCI recombinase facilitates the site-specific recombination between any inverted repeats results in an inversion of the DNA segment(s) either independently or in groups. HP1 integrase promotes site-specific recombination of the HP1 genome into that of Haemophilus influenza. Bacteriophage Hp1_like integrases are tyrosine based site specific recombinases. They belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.11542e-42
CP032839.1\|AYK16745.1\|317967_318177_+\|AlpA-family-phage-regulatory-protein	gnl\|CDD\|283558	pfam05930, Phage_AlpA, Prophage CP4-57 regulatory protein (AlpA). This family consists of several short bacterial and phage proteins which are related to the E. coli protein AlpA. AlpA suppress two phenotypes of a delta lon protease mutant, overproduction of capsular polysaccharide and sensitivity to UV light. Several of the sequences in this family are thought to be DNA-binding proteins.	1.59757e-09

>CP032839.1|AYK16738.1|310572_312126_+|DUF3987-domain-containing-protein
MSHGTFADNLARFKEPKQQETKPSRKSPHLPQHEAGRMAREVMGTTESTLDDILASVAAEITEEPESAPVSLLEMAGDHPLATYARQVADSIQISRDSTFMIGLGLTSAVVGSTHSVKTPWDADLPLGLYVTAEQPPAAGKSGVMAAFQKPFRSALRSMNNARNNALDALEAQIDAADDPALKGALEEQMQGQAKPVRGWISNATPEALEKDAISPNDGFFMLASDERGLLNSVFGLSYGKGAPANMDAALKGFDGGAYVSVRATRRGFDGEVHGSIVCFAQPGSIESIMLASGGTGLSERFLWLSDDHNLGKRDHLKPWIKPDAEQFTRMCEETIKLMPLAPSLDRLTPLAIPAALLGDLRKAKQEIERELGDNGQFGNDAVRGAAGKFDMQVMKVASILHVSRNLMQGIAVPPNIGAADFGIALTICRELLNRYRLALISKRIIGFGAEADAVISYLERFPQGKDMEQAKNSLRSKAAFKGRGTKQIGETIEKLIALGIAMVETGMTRRKTIRLV
>CP032839.1|AYK16737.1|310387_310576_+|hypothetical-protein
MNKAQIPRLPSGEIDVFRLKMRDPVMVDYAAYDATPSELAEMVLAVANIQRQLHEQPLEVAA
>CP032839.1|AYK16736.1|310044_310395_+|hypothetical-protein
MNNQNPRKNQFARDILAANKSHFTDKEFRVLNRIAERGKFEYRKEYEAADGSLPYLPSFAQKVTDKLAAIGLKLDAIPANDGTCRKLYALIPDHAAATKAILDGFGFGVYGSADHE
>CP032839.1|AYK20146.1|309637_309853_+|hypothetical-protein
MNQQLENWKSISELADSYPQFSRSTLKTLFWKREERPGLSRCARMVGKKLFVNVPMFGLWLGGQLPEQMGE
>CP032839.1|AYK16735.1|307788_308760_+|site-specific-integrase
MDAKWSKDRTFKKKKDAEQFLARITTCEDLADALTSVALTTSLFHEVAKQFLDQYQGRDRSAIQRVGWWADRLGDKAVGKITRQHVKDGLNSLLNDEKAQATVNRYQAALSAVFAWFNDEHDTKHNPAREVRQQTEDNARTRFLSDDEIANLLNAAQASKWERLHLLLHMALTTGARRSELINLRWCDIDFQQKTALLERTKNGSQRSLALTTSLIAELMPWREIGESYIFPHPSRLNAPFSEFDHHWRSCLLQSGITNFRFHDLRHTSASIMAKTDASLLELADHLGHKTMAMVKRYAHLCTGHKVVRAESTFGNLTRGAAR
>CP032839.1|AYK20145.1|306857_307484_-|RDD-family-protein
MEHSRLFIYSTPCRCGASYIECRHHLNGIKTMAKPKKVQQKSPSPATQPYPSAGLLRRLGALIYDALVVTSLLIIAGFIGMGVAKLLLVTGMASVPAGEDTVWLLTRHHLSLIYTLWLAFVICGFYTWFWTRAGQTVGMRAWRLRIQNEDGSHIRITQALIRLATAAFGLGNLMCLFNRQRPRAFQDIWAECEVIVLSKQENLELLNK
>CP032839.1|AYK16734.1|305712_306783_+|lipopolysaccharide-ABC-transporter-permease-LptG
MFGILDRYIGRVIFMSILLCEITLVGLAALIKYVEQLKSVGDGNYDMINALYYVLLSMPKEAVLFFPLAALLGGLIGLGQLATSSELVVMQAAGRSKISIVMAALKTAIPLMIMVGLMGEYVAPIAKRMADDIKAGALSEGRLTVSAYGVWARDGNNFVNINGVRNDGALTGITLYRFTPERKLIDVVQAQEGVFERHHWLLKQTQVTRFDDPAQIRSEQHDKMEWSSELTPKQLGVVSIDPENLSVSGLLDYIGYLDANKQDAGRYKLEMWRKLLSPLSVVAMILLASSFIFGPLRSVSMGARMLMGIMTGFAVYVSDRVFGPISLVYAVPPILAAIAPSLLFGGISFYILSRKQ
>CP032839.1|AYK20144.1|304580_305687_+|LPS-export-ABC-transporter-permease-LptF
MIVFRYLFRETLKTQLAVLFVLLLIFVSQQFIKIIGDAADGEVPTRLVSTLLLLNLPNMALLMLPISLFLAILFAHGRLYAESEMTVMHAVGFSHRFVMRSAMLLALLTAVVAAFNTGWIAPQAKEREYQVIDEFKADPGISFLQAGRFMELDKGRLVAYIQDLNDNGSKLQKIFVLQRAEGNNPPSVVVATEGVVTVDENGLQWLTLMDGSRYEGNFSGKQFQISDFREYGLVIRQQEMERSNRKAAAKPTMELFGTQDNAMMAELQWRISLPLSIPVLTLLVVPLARVNPRQGRYAKLLPAIMLYLSYFLLLSAARSAIDSGRLPYWPGMFLVPLGYLLFIGLPLNLQGTSWWNGVKGRYFNRKSA
>CP032839.1|AYK16733.1|302893_304402_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACVVVGVFEPRRLSPVAEQLDKISDGYISSLLRRGDLEGKPGQMLLLHQVPGVLSERVLLVGCGKERELDERQYKQIINKTITTLNETGSMEAVCFLTELHVKGRDTYWKVRQAVETTKAGLYSFDQFKTNKAEPRRPLRKLVFNVPTRRELTIGEKAIAHGLAVAKGVRVCRDVANMPPNVCNPAYLASQARRLADAYDNITTKVVGEQEMAELGMNSYLAVARGSDNEAMMAIIEYKGHPDAKPIVLVGKGLTFDSGGISIKPADGMDEMKYDMGGAASVLGTMHALAQLQLPINVIGVLAGCENMPGGNAYRPGDILTSMSGQTIEVLNTDAEGRLVLCDALTYVDRFDPETVIDVATLTGACVIALGHHTSGLLANHNPLAHELLNASEQAGDRAWRLPLFDEYQEQIDSPFADMANIGGRPAGTITAAAFLSRFTKKYNWAHLDIAGTAWKSGKDKGSTGRPVPLLTQFLLNRAGVDIEEKE
>CP032839.1|AYK16732.1|302263_302719_-|DNA-polymerase-III-subunit-chi
MSQVTFYLMSEQDDAQTSAVERLACTLAAESWGAGHIYLFCDDEAQALRLDELLWQLPPERFVPHQLQGESGMAPVEIGYQPPKRRYARLINLATATPLFAGHFAQVVDFVPTDETQKQQARERYKHYRQAGHTLEMRDQPVLAAPDPAQP
>CP032839.1|AYK16739.1|312649_313267_+|hypothetical-protein
MAKINHVATGAWRGQISGLAQKAIDDAAAIGRELEARLNRIENDRTRNPLEKLPMRQKAAQDAKQHLERTMALAYRFGVERAEEAQKARARDLVPTSDNLSAMTLAAHLMNKSPAEIKKLVQVDPRFALAANFYPPEVFGMKRDEHSAMMGKAWETHHPEKFAIEQAAIQELKALDVLTRSVGDFCKMEIEQCAQGMASAGRVED
>CP032839.1|AYK16740.1|313269_313671_+|hypothetical-protein
MTGRFKAGQSGNPAGRPKGALSPAMKLIKQASPAVLQQVIAQAIDGDMQAAALVLARGVPTLKATQEPVELITAAEFEQMTTPERAEAILAAAVSGRIAPDVAQQLITSLTAVAGVTEWAELAQRVEELEALK
>CP032839.1|AYK16741.1|313825_314074_+|hypothetical-protein
MRRPSERLTQRLARVSESFRQDPPIYVVDWFEVEHDDPRAETVEQQGNTVQIYASSREQYDHRRAELEQQLSPCRMICIVPV
>CP032839.1|AYK16742.1|314083_314332_+|hypothetical-protein
MYYQTREPMKITSLFYKEVEPDHPRAGKWVKLPEAVHPSWLFYGSRAEFLQIIESGQSPSPAGHIAMIPAPWETVYTGSEPA
>CP032839.1|AYK16743.1|315076_316285_+|DUF4102-domain-containing-protein
MPLSDITARQAKYTGKPQKLSDEKGLFLLVNQSGKYWRLKYRHSGKEKVLALGVYPEVSLKEARAKRDEARRLIAEGVDPGLARKQSKAANRLASEHSFEAIAREWHQSQLARWSPGHARRVIESLEVDAFPDLGLVPVAELTAPMMLDALRKVEKRGATETAGRVLQRISAIMRYAIQTGRASYNPAQDLRGALKAAKKEHRPALPRAELPEFYRRLAAEPLNPATRLAFHLLMLTMTRPGEVRFARWDEFDLERAEWRIPATRMKMRSEHIVPLSRQALAVLDELRTLTGHCDLLFPSERKLTDPMSENTLSYAMGRMGYKGIATPHGFRALASTTLNEEGFDPDVIERQLAHAERNKVRAAYHRAEYLDDRRKLLQWLADFYDSQQGSNVRPVNFHRAG
>CP032839.1|AYK16744.1|316585_317914_+|IS4-family-transposase
MRIVQALDFLHASNAAQFESLSDLISPELITTLLAEEDVVTLRRRRMPMERLVWAIIGMAMFRHVPMTQLVNQLDILLPGDRPFVAPSAFLQARQKLGDKSIERLFHETASLWHQQANHPGWAGLQLLAVDGVMWRTPDTPDNAAAFAKPGTQHGETAYPQVRMLCQMELTSHLLVQAVMESCAVNEMVLAEQLIARTPDHSLTLFDKGFYSLGLLHAWQTTGCERHWLLPLKKGTQYEVVRKLGRQDALVQLKTSPQARKKWPQLPDTVEARLLTRSLNGKERQVLTSMVDPMRFPSADIVELYSHRWEIELGYREMKHSLQQHRLTLRSKKAAGIRQELWGVLLAYNLLRSQMVKMAASLKGYTASQLSFHMASVYLIHELSCMPYMSPGTIPKRVAELEKQAGQFVLPERRERSYPRCVKPRPQRYSVKKANKNNASQA
>CP032839.1|AYK16745.1|317967_318177_+|AlpA-family-phage-regulatory-protein
MTIPETGFIREAQLVTTPSKVGPLPFSKSTLWRMVRDGKFPAPIKLSPRVTAWKCESVREWIKAQGQAA
>CP032839.1|AYK16746.1|318187_318619_+|hypothetical-protein
MQKEKGRTANGTTKLEPGQHITKHELVATHLLERGAQGVSALSGLAGLHDLNMRNSISLLRRNHGIAITDAFFEQQHSGGGTTRFKLYWLTDREQAHKLVALINHWRRQRQAAPLADDHAAILCARTPEASTLPPAASPRGTP
>CP032839.1|AYK16747.1|319270_319525_+|hypothetical-protein
MTYFAWASSTEQPTFTGPINPRTGKRSQAGSLSAFDWRRDRDRFIEQTKGAAVVVTAKQARELKAGLDERAFNELLAVLTGGGL
>CP032839.1|AYK16748.1|319669_320026_+|hypothetical-protein
MSEIDKLVSSVALAYLAVRGNTFNHLGVQLPLDQEVLTMAIQNNIVGAHLEHAGGKQGREDALLMLRHMLAGDELTELGGTLLDEMNRCFCADVRQMLDEGKDPMVELAIEQTRRATQ

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Crispr_ID: CP032839_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032839_2

723391-723496

Orphan

Consensus_repeat	Method
ACTAAACGCCAAGGTTTGATCCGAATGAAATCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032839_2

>merge|CP032839|2|723391-723496|CRISPRCasFinder
ACTAAACGCCAAGGTTTGATCCGAATGAAATCTGCATATGCGAGCGACGATGGCGCTGGCCGTTTTATCTGTACTAAACGCTAAGGTTTGATCCGAATGAAATCTG

>CP032839|2|2|723391-723496|CRISPRCasFinder
ACTAAACGCCAAGGTTTGATCCGAATGAAATCTG	CATATGCGAGCGACGATGGCGCTGGCCGTTTTATCTGT
ACTAAACGCTAAGGTTTGATCCGAATGAAATCTG

Protein	Signature genes	Signature genes Name	Protein_function
CP032839.1\|AYK20175.1\|718310_718556_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370577
CP032839.1\|AYK17083.1\|731531_732350_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|182523
CP032839.1\|AYK17076.1\|722803_723328_+\|peptidoglycan-associated-lipoprotein-Pal	unknown	unknown	gnl\|CDD\|182744
CP032839.1\|AYK17068.1\|715422_716979_+\|cytochrome-bd-I-ubiquinol-oxidase-subunit-CydA	unknown	unknown	gnl\|CDD\|185052
CP032839.1\|AYK17078.1\|725876_727190_-\|sodium-dependent-transporter	unknown	unknown	gnl\|CDD\|271367
CP032839.1\|AYK17085.1\|733796_734420_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225222
CP032839.1\|AYK17080.1\|728345_729659_-\|sodium-dependent-transporter	unknown	unknown	gnl\|CDD\|271367
CP032839.1\|AYK17070.1\|718141_718258_+\|cytochrome-bd-I-oxidase-subunit-CydX	unknown	unknown	gnl\|CDD\|227227
CP032839.1\|AYK17086.1\|734731_735208_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
CP032839.1\|AYK17087.1\|735339_735657_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225653
CP032839.1\|AYK17084.1\|732460_733690_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
CP032839.1\|AYK17075.1\|721428_722754_+\|Tol-Pal-system-protein-TolB	unknown	unknown	gnl\|CDD\|235312
CP032839.1\|AYK17081.1\|729870_730710_-\|isopenicillin-N-synthase-family-oxygenase	unknown	unknown	gnl\|CDD\|226022
CP032839.1\|AYK17071.1\|718661_719069_+\|tol-pal-system-associated-acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|274304
CP032839.1\|AYK17072.1\|719058_719748_+\|protein-TolQ	unknown	unknown	gnl\|CDD\|131843
CP032839.1\|AYK17079.1\|727622_728342_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270422
CP032839.1\|AYK17073.1\|719747_720194_+\|protein-TolR	unknown	unknown	gnl\|CDD\|274306
CP032839.1\|AYK17082.1\|730916_731480_+\|DUF2799-domain-containing-protein	unknown	unknown	gnl\|CDD\|378521
CP032839.1\|AYK17074.1\|720199_721333_+\|cell-envelope-integrity-protein-TolA	unknown	unknown	gnl\|CDD\|368950
CP032839.1\|AYK17069.1\|716990_718127_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|184965

Protein	Function_ID	Function_description	E-value
CP032839.1\|AYK20175.1\|718310_718556_+\|hypothetical-protein	gnl\|CDD\|370577	pfam09600, Cyd_oper_YbgE, Cyd operon protein YbgE (Cyd_oper_YbgE). This entry describes a small protein of unknown function, about 100 amino acids in length, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It appears to be an integral membrane protein. It is found so far only in the Proteobacteria.	1.50037e-14
CP032839.1\|AYK17083.1\|731531_732350_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	7.38588e-82
CP032839.1\|AYK17076.1\|722803_723328_+\|peptidoglycan-associated-lipoprotein-Pal	gnl\|CDD\|182744	PRK10802, PRK10802, peptidoglycan-associated lipoprotein Pal.	7.01963e-78
CP032839.1\|AYK17068.1\|715422_716979_+\|cytochrome-bd-I-ubiquinol-oxidase-subunit-CydA	gnl\|CDD\|185052	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA.	0
CP032839.1\|AYK17078.1\|725876_727190_-\|sodium-dependent-transporter	gnl\|CDD\|271367	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain. SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporter family or Na+/Cl--dependent transporter family) include neurotransmitter transporters (NTTs): these are sodium- and chloride-dependent plasma membrane transporters for the monoamine neurotransmitters serotonin (5-hydroxytryptamine), dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. These NTTs are widely expressed in the mammalian brain, involved in regulating neurotransmitter signaling and homeostasis, and the target of a range of therapeutic drugs for the treatment of psychiatric diseases. Bacterial members of the SLC6 family include the LeuT amino acid transporter. An arrangement of 12 transmembrane (TM) helices appears to be as a common topological motif for eukaryotic and some prokaryotic and archaeal NTTs. However, this subfamily which contains the majority of bacterial members and some archaeal members, appears to contain only 11 TMs; for example the functional Fusobacterium nucleatum tyrosine transporter Tyt1.	2.38619e-165
CP032839.1\|AYK17085.1\|733796_734420_+\|transcriptional-regulator	gnl\|CDD\|225222	COG2345, COG2345, Predicted transcriptional regulator [Transcription].	5.87447e-59
CP032839.1\|AYK17080.1\|728345_729659_-\|sodium-dependent-transporter	gnl\|CDD\|271367	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain. SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporter family or Na+/Cl--dependent transporter family) include neurotransmitter transporters (NTTs): these are sodium- and chloride-dependent plasma membrane transporters for the monoamine neurotransmitters serotonin (5-hydroxytryptamine), dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. These NTTs are widely expressed in the mammalian brain, involved in regulating neurotransmitter signaling and homeostasis, and the target of a range of therapeutic drugs for the treatment of psychiatric diseases. Bacterial members of the SLC6 family include the LeuT amino acid transporter. An arrangement of 12 transmembrane (TM) helices appears to be as a common topological motif for eukaryotic and some prokaryotic and archaeal NTTs. However, this subfamily which contains the majority of bacterial members and some archaeal members, appears to contain only 11 TMs; for example the functional Fusobacterium nucleatum tyrosine transporter Tyt1.	2.50105e-164
CP032839.1\|AYK17070.1\|718141_718258_+\|cytochrome-bd-I-oxidase-subunit-CydX	gnl\|CDD\|227227	COG4890, COG4890, Predicted outer membrane lipoprotein [Function unknown].	9.94001e-13
CP032839.1\|AYK17086.1\|734731_735208_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	3.22775e-48
CP032839.1\|AYK17087.1\|735339_735657_-\|hypothetical-protein	gnl\|CDD\|225653	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown].	0.000313638
CP032839.1\|AYK17084.1\|732460_733690_-\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.89315e-45
CP032839.1\|AYK17075.1\|721428_722754_+\|Tol-Pal-system-protein-TolB	gnl\|CDD\|235312	PRK04792, tolB, Tol-Pal system protein TolB.	0
CP032839.1\|AYK17081.1\|729870_730710_-\|isopenicillin-N-synthase-family-oxygenase	gnl\|CDD\|226022	COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only].	6.86637e-39
CP032839.1\|AYK17071.1\|718661_719069_+\|tol-pal-system-associated-acyl-CoA-thioesterase	gnl\|CDD\|274304	TIGR02799, Acyl-CoA_thioesterase_YbgC, tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import of certain organics but also in the maintenance of outer membrane integrity (by an unknown mechanism).	4.63634e-55
CP032839.1\|AYK17072.1\|719058_719748_+\|protein-TolQ	gnl\|CDD\|131843	TIGR02796, Protein_TolQ, TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	3.85704e-106
CP032839.1\|AYK17079.1\|727622_728342_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270422	cd13704, PBP2_HisK, The periplasmic sensor domain of histidine kinase receptors; the type 2 periplasmic binding fold protein. This subfamily includes the periplasmic sensor domain of the histidine kinase receptors (HisK) which are elements of the two-component signal transduction systems commonly found in bacteria and lower eukaryotes. Typically, the two-component system consists of a membrane-spanning histidine kinase sensor and a cytoplasmic response regulator. The two-component systems serve as a stimulus-response coupling mechanism to enable microorganisms to sense and respond to changes in environmental conditions. Extracellular stimuli such as small molecule ligands and ions are detected by the N-terminal periplasmic sensing domain of the sensor kinase receptor, which regulate the catalytic activity of the cytoplasmic kinase domain and promote ATP-dependent autophosphorylation of a conserved histidine residue. The phosphate is then transferred to a conserved aspartate in the response regulator through a phospho-transfer mechanism, and the activity of the response regulator is in turn regulated. The sensor domain belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space through their function as an initial high-affinity binding component. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.90251e-14
CP032839.1\|AYK17073.1\|719747_720194_+\|protein-TolR	gnl\|CDD\|274306	TIGR02801, Protein_TolR, TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	9.04242e-42
CP032839.1\|AYK17082.1\|730916_731480_+\|DUF2799-domain-containing-protein	gnl\|CDD\|378521	pfam10973, DUF2799, Protein of unknown function (DUF2799). Some members in this family of proteins are annotated as yfiL which has no known function.	2.14062e-28
CP032839.1\|AYK17074.1\|720199_721333_+\|cell-envelope-integrity-protein-TolA	gnl\|CDD\|368950	pfam06519, TolA, TolA C-terminal. This family consists of several bacterial TolA proteins as well as two eukaryotic proteins of unknown function. Tol proteins are involved in the translocation of group A colicins. Colicins are bacterial protein toxins, which are active against Escherichia coli and other related species (See pfam01024). TolA is anchored to the cytoplasmic membrane by a single membrane spanning segment near the N-terminus, leaving most of the protein exposed to the periplasm.	1.87806e-20
CP032839.1\|AYK17069.1\|716990_718127_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|184965	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II.	7.4003e-160

>CP032839.1|AYK17076.1|722803_723328_+|peptidoglycan-associated-lipoprotein-Pal
MQLNKLLKGLAIALPLFTLAACSSSSDSDAAGAESGMTDGMGGVQTGGANGMLSPEEQMRQKFEALQRDNVIYFPFDGYDIQGQYADLLDAHASYLRERPSVKVLIEGHADERGTPEYNIALGERRAKAVAKYLQTLGVQAEQLSIVSYGEEKPLDLSHTEDAFAKNRRAVLVY
>CP032839.1|AYK17075.1|721428_722754_+|Tol-Pal-system-protein-TolB
MIRKVFFALVGCLLLGQSAQAALDIVITGGIDSARPIAVAPFKWEGNGQLPQDIAEVVSNDLMRSGKFKPLARGQMPQTPSSSSEINFAPWASQGVEAVVVGSISAVGDGTYKVNFELVDVLKGQLAKAQGGESNGYILDSRTATIPGAQMRQFAHRISDIVYERLTGERGAFLTRLAYVSVQQGTQFPYQLRISDYDGYNEKTLLRSREPLMSPAWSPDGSKLAYVSFENQKSEIYVQDIYTQQRSLITSFRGINGAPEWSPDGRRLAIVLSKDGSPNLYVVDVASKQLTRVTTSRVIDTEPSWMPDGQNLLFTSERGGKPQIYSVNLATGMTRRMTWEGESNQGASITPDGKIMVMVTRVQGQYRIARQDMENNALLVLTQSALDESPSVAPNGSMIIYATIYQGRKSLALVSTDGRFKAVLPTSSGEIRAPAWSPFLN
>CP032839.1|AYK17074.1|720199_721333_+|cell-envelope-integrity-protein-TolA
MDVKRGISGYLIASFLLHLIIGIILFVGLDFSKPKRPESKGQIVNAVMLDENFLNEQAKQIQQQKSQPKPQKVEKEKDKEDTDLAKRELAQKQEQLRIAETKRKQAEEATRKAEAEKQKKVAEQKQAEEKAQKAEEARKLEEQKAKKAEAERKAAEAESKALALKKKKEQEKKEAEEKAKAAEAKAKKAEADKKAKAEAEKKAKAEAEKKAKAEAEKKAKEEAEKKAKADAEKKAKAEAEKQAKIAAERKRKAAEQAKLQKEMEEMMQQQLSAEANARSQAASAAAQGEVDKYAALIKATVERYMILDPTMRGKTCTIGVRLASSGFVISVDNGQGDPAVCRSGKAAVLKANQLPVPKDPAAFEMLKEFNLKLEPSI
>CP032839.1|AYK17073.1|719747_720194_+|protein-TolR
MQTYQRIRRKKVAEINVVPYIDVMLVLLIIFMAVTPVITQGVKVDLPQAESEQLPEDAKPPFIVSVNTEGEYVIKAGEADDEPVPSGTPEAMQQYITEKAMGYLAINQNAPVVVAGDKAVRYEEVILLMVALKNAGVPQVGLMTDPVN
>CP032839.1|AYK17072.1|719058_719748_+|protein-TolQ
MHAEISFIGLFWQASLLVKLVMMTLMSMSIVSWALIIQRSKAIKAANLASEQFEDRFWSGVDLNRLYQESSSRRDDIEGMEDIFYSGFKEYARLLKAGARGQDAVMDGTYRAMRVSLSRAVDDLESNLPVLATIGSISPYIGLFGTVWGIMNAFIALGQVQQATLQMVAPGIAEALIATAMGLFAAIPAVIFYNRFSNKVERLENAYANFMDEFTTILNRQIAQQQGDQ
>CP032839.1|AYK17071.1|718661_719069_+|tol-pal-system-associated-acyl-CoA-thioesterase
MGEVFEFPVRVYYEDTDAGGIVYNANYLKFMERARTEFLRAKGVEQDVWLQEGYAFVVSRTEIDFRSAARFNELLNVLTQVIEVKRASLRFSQQILAADGRLITQAMVQIACVSHPQMKPVAIPEKIKGVLLSAR
>CP032839.1|AYK20175.1|718310_718556_+|hypothetical-protein
MLLAAALLAVAILQAPNLIAANTSEHGLWLAPWLMWAVCCGVLNGLGFHLKSLPGRVLFNPWLAWPSLLYGLWLTHSYFLS
>CP032839.1|AYK17070.1|718141_718258_+|cytochrome-bd-I-oxidase-subunit-CydX
MWYFTWILGLLLACAFGIINALWLEHTENMDRQIDENK
>CP032839.1|AYK17069.1|716990_718127_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MFDYETLRVIWWALVGVLLIGFAITDGFDMGVGALLPFVGKKDVERRVMLNTMGPHWEGNQVWLVTAGGALFAAWPMVYAATFSGFYIAMILTLMALFLRPVGFKYRSLRADAKWRSNWDWALFAGSAVPPIVFGVAFGNLLQGVPFEFNQFMMLTYHGNFFGLLNPFGILAGLVSLFMLLTQGATWLMMKTDGEVLARSRTAAMICSLLTLVLFAAAGWWVSGMEGYVIVKAAATDAVSNPMNKEVVLQAGAWMNNYTLYPWMVAAPVLGLAMSLLTALFARMNIGWLAFTSSSLAIAGVILTAGFSMFPFVMPSSLEPSLSLTMWDATASFNTLQVMTVAAAIFVPIVLGYTIWTYIKMFGRVTNKHIEDNQQSLY
>CP032839.1|AYK17068.1|715422_716979_+|cytochrome-bd-I-ubiquinol-oxidase-subunit-CydA
MIAEHVVDLSRFQFAATALYHFLFVPLTLGMAFLLAIMESVYVMTNNTIYRDMTKFWGKLFGINFALGVTTGLAMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFVGMFFFGWDRLSKHQHLAATWLMALGTNLSALWILVANGWMQNPVGAEFNFESMRMEMMSFADVVLNPVAQVKFVHTVAAGYTCGAMFVLGISSYYLLKNRDVAFARRSFAIAAAFGMASIVSVLILGDESGYETGEVQKVKLAAIEAEWETEPAPAAFTLFGIPNQEEMRTDYAIKIPYALGIIATRSLDGQVTGLKDLKSEHELRVRNGMTAYDLLTKLQSGDKSDETRARFDEVKQDLGYGLLLKRYTSNVTDATDEQIKAAVDDSIPQVLPLFFAFRIMVAVGMLMLVLIGMAFYDSARHQIGKRKWLLKGLLWGIPLPWIAIEAGWFVAEYGRQPWTIAEVLPTSLSASNLPAAEIWFSLIGICLFYTVLLVIEMYLMFKYARLGPSSLKTGKYHFEQIKA
>CP032839.1|AYK17078.1|725876_727190_-|sodium-dependent-transporter
MSQVQWSSRLGHVLAAAGTAIGLGAIWKFPYVTATNGGGAFLLVFLLFSFTLGVAVQVGETLLGSHSQRGVLGAFRKLVGPNWRWMGYMGIACGFFIYSFYSVVGGWTVGYAALAMAGKLNLSEGSALTALFNGYVSNPWWPVLTHLIFAGLTWWFVQGGIQKGVERALRWMMPALFIMMLLLVGVGLSMPGSMAGVRQLLLPDFSMLTGQSVLDALGLAFFSLSIGLGVHTTYGAYLPNSEGVLRSGVWVVTLASLISVLAGLMIFPALASTGIDPTAGPGLTFMTMPAVFSHLPFGQGLGVVFFLLLLVAALSSSISMLEHLVRFTTEEWGWSRRGACRVLTLLIMASGIPVSLSFGPWSDLTLFGKTIFELLDYLTSNLMMPLFGLVLTLLLGWRLGDAILPAGLSPALRLALLWCWRVVAPLLISGILIRGIM
>CP032839.1|AYK17079.1|727622_728342_+|ABC-transporter-substrate-binding-protein
MRWMMLPWLLISLSVSAQLGLTLLSHDLPPFTEYRDGKLDGFAIRLIDEVQEELGTRYPVRIYPLKRALALARVEPGYGLFVVQRLPERESHFKWVGPLFINRVFIYQAPDSRHPLTSLAQLRDLPRVGVVLGNADDVRLTHEGYTNLVRYKTVGEAIERLMLGKIDALPMAELVMEATLDKMGLSRRSIVSSGVLLHQAGLYIVFSKGTDDAEITRWQHALEAVRAAQGRADEPTREE
>CP032839.1|AYK17080.1|728345_729659_-|sodium-dependent-transporter
MKQSQWSSRLGYILAAAGSAVGIGAIWKFPYVTAVNGGGAFLLVFLLFSFTLGVAVLMGETLLGSMSRRGVVGAFSDLLGKQWRWVGVMGVISTLLIYCFYSVVGGWTLGYTGMAISGQLNHGDAAALTARFNDYVSGDVWPILTHLLFAALTWMVVQGGIQKGVERTLRWMMPALFLMILMLVAFGLTLPNAMAGVRHFLMPDFSKLRMSGVLDAMGLAFFSLSIGLGIHTTYGAYLPTSEGVGRSSLWVVLLASMVAVLAGLMIFPVLASTGIDPASGPGLTFMTMPAVFQLLPFGQVLEVIFFALLVFAALSSAISLLEHLQCFLCETWGWSRRTACSAITGFVMVSGVPVSLSFGSLQHATLFGKTIFELLDFVTSNLMMPLFGLMLTLLLGWKLGRKALPQGIASHWHHLLMNCWRWIAPLLIGGILIRGLV
>CP032839.1|AYK17081.1|729870_730710_-|isopenicillin-N-synthase-family-oxygenase
MKVLTVDYRSPDAAQRFTESLRTTGFGVLTNHPIPKELVQSIYDNWYRFFMSEQKQDFLFNRETQDGYFPPSVSEVAKGHSQKDIKEYFHIYPWGQMPEELKEQAMEYYRLANGLAAELLGWVEQYTPADIAAHYSSPLSSMIEESQKTLLRVLHYPPFDGTEEPGAIRAAAHEDINLLTILPAANEPGLQVKGSDDEWMDVPCDFGTLIINIGDMLQEASRGYYPSTTHRVINPTGGSASKSRISLPLFLHPRPDVVLSERHTAHSYLMERLRELGVI
>CP032839.1|AYK17082.1|730916_731480_+|DUF2799-domain-containing-protein
MSPKILLLTLPVLLAGCSALSEDECRTMSWYNLGYQDGSEGKTRQATRDYVSSCSEYGLKVDEAEWKRGYDKGLELYCIPELAYSKGKEGQAYLGVCPNDASFLKQYQRGYEEYKLAARLREISDELERTERDIDTLERSIRNETNTEQRDYYRAKRDRAIRHYESLRREYNRLRYPDRVIQFSFGG
>CP032839.1|AYK17083.1|731531_732350_-|Cof-type-HAD-IIB-family-hydrolase
MSEYKAIALDMDGTLLTRDHKISSATRAALAQARAHGIKVLLVTGRHYMTARPFHHELALDTPLICSNGAYLYDPVQNRILSGDPLATAPLTELLAAVEAQQMGALFHLSEGIGYIGCEEHVTRIRHWSANQPDHLKIALHPVEDLAGWLDNPVWKLELFNQDPARLHTFMGEVVEQMPFTRDWAAPYAVELVQPGCSKGNRLARWAASEGIAMDQVVAFGDNNNDISMFEQVGLAVAMGNAAPQIQSHAHRVTADHNEDGIALALQRWVLP
>CP032839.1|AYK17084.1|732460_733690_-|MFS-transporter
MEKHEHKNPLWVLVMTVTLAVAGFSLPSPVLAPLLLDPAHGMLTPEASDWSRKVWLGVIMGLYPLFQLVGSPWLGRLSDRYGRKPLLLLSLAGVLAGYALMALGIAWRSLPLLLLSRIVEGLCNGNIAIVQAMAADLAGKEHKARSFAWINIGMNLGWVVGPVIGGYAAVISGDYSLAAWLAVGMTLLNLLLVYWLIPYRPPVAAARQAPTLSSRQLLLQPPLLPYFALTLISYGAVQLYFTYFNIWLVERLAWDPAQLAQAAVLVSLPMMAGSWLGSRIARHWRGSSLGIVGHLVMASGMLLFILPVHWWGLALTFVPAGIGMSLGELATSVAISNRSHPEQQGQAMGLYRALAVGSEILAVLLGSLVLLAGTEWPFYLATLCSLASAAGFYLLRHRADRRQQLASCT
>CP032839.1|AYK17085.1|733796_734420_+|transcriptional-regulator
MNASTDKILFLLKSHGPQSAAALGEQLQMTSMGARQHLLTLEQEGWVTFSDEARGRGRPVRLWQLTEQAWQRFPDSHSDLTVQLIDNVRELFGEEGMERLIQQRELQMLARYQEALGSHGLSGRLAALKELRTREGYMAEIRREEDGSWLLWESHCPICAAARTCRGFCRSELALFRQLLAPATVEREQYLLEGAHRCLYRITPPAL
>CP032839.1|AYK17086.1|734731_735208_+|Lrp/AsnC-family-transcriptional-regulator
MLKLDRIDRHILELMQENGRISNLELAELVGLSPSPCSRRVKALEDAGLIDTHVTLLNARQLGLTLTAYIHISMDRHTPERFENFDRAISELPEVLECDLITGNDADYQLKVVVRDMEHYQHFLLDKLTHIPGVTGVRSSFVLRRIKHKTALPLNHLG
>CP032839.1|AYK17087.1|735339_735657_-|hypothetical-protein
MQTSIVGLSILWGLASFGVQGDFIESRDSVAPSWQAESRVEMEGYLIESLGEDRWLFDNGSESLLVSLPEGQWVPTGERLRVSGEPQQELSGWLLQVEDISQVSV

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Crispr_ID: CP032839_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032839_3

834020-834096

Orphan

Consensus_repeat	Method
CTCTTTCAAGAGCAAGAATTGAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032839_3

>merge|CP032839|3|834020-834096|CRISPRCasFinder
CTCTTTCAAGAGCAAGAATTGAAACCAGTGATACGCACCACAGGTTGCGATGACTCTTTCAAGAGCAAGAATTGAAA

>CP032839|3|3|834020-834096|CRISPRCasFinder
CTCTTTCAAGAGCAAGAATTGAAA	CCAGTGATACGCACCACAGGTTGCGATGA
CTCTTTCAAGAGCAAGAATTGAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP032839.1\|AYK17173.1\|842068_842545_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP032839.1\|AYK17167.1\|835548_836790_+\|miniconductance-mechanosensitive-channel	unknown	unknown	gnl\|CDD\|366370
CP032839.1\|AYK17164.1\|832072_833179_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|366704
CP032839.1\|AYK17161.1\|829804_830401_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
CP032839.1\|AYK17166.1\|834205_835405_+\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
CP032839.1\|AYK17171.1\|840919_841237_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP032839.1\|AYK17168.1\|836869_837904_+\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|182294
CP032839.1\|AYK17158.1\|823363_825274_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236729
CP032839.1\|AYK17163.1\|831243_831942_+\|aspartate/glutamate-racemase-family-protein	unknown	unknown	gnl\|CDD\|224707
CP032839.1\|AYK17165.1\|833460_833931_+\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
CP032839.1\|AYK17172.1\|841229_841922_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP032839.1\|AYK17170.1\|839193_840711_+\|sodium/proline-symporter-PutP	unknown	unknown	gnl\|CDD\|185317
CP032839.1\|AYK17157.1\|822061_822916_-\|23S-rRNA-(adenine(2030)-N(6))-methyltransferase-RlmJ	unknown	unknown	gnl\|CDD\|225509
CP032839.1\|AYK17160.1\|827787_828255_-\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK20179.1\|822909_823353_-\|DUF2390-domain-containing-protein	unknown	unknown	gnl\|CDD\|378196
CP032839.1\|AYK17162.1\|830526_831117_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
CP032839.1\|AYK17159.1\|825428_825842_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341361
CP032839.1\|AYK17175.1\|843583_844345_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP032839.1\|AYK17174.1\|842544_843603_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP032839.1\|AYK17169.1\|837973_838867_-\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|377343

Protein	Function_ID	Function_description	E-value
CP032839.1\|AYK17173.1\|842068_842545_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	6.9269e-97
CP032839.1\|AYK17164.1\|832072_833179_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|366704	pfam01553, Acyltransferase, Acyltransferase. This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function. This family also includes tafazzin, the Barth syndrome gene.	8.08287e-08
CP032839.1\|AYK17161.1\|829804_830401_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	4.14011e-27
CP032839.1\|AYK17166.1\|834205_835405_+\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
CP032839.1\|AYK17168.1\|836869_837904_+\|L,D-transpeptidase	gnl\|CDD\|182294	PRK10190, PRK10190, L,D-transpeptidase; Provisional.	1.93533e-143
CP032839.1\|AYK17167.1\|835548_836790_+\|miniconductance-mechanosensitive-channel	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.93841e-32
CP032839.1\|AYK17163.1\|831243_831942_+\|aspartate/glutamate-racemase-family-protein	gnl\|CDD\|224707	COG1794, RacX, Aspartate racemase [Cell envelope biogenesis, outer membrane].	4.7766e-110
CP032839.1\|AYK17165.1\|833460_833931_+\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	8.8023e-39
CP032839.1\|AYK17172.1\|841229_841922_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.26209e-120
CP032839.1\|AYK17170.1\|839193_840711_+\|sodium/proline-symporter-PutP	gnl\|CDD\|185317	PRK15419, PRK15419, sodium/proline symporter PutP.	0
CP032839.1\|AYK17157.1\|822061_822916_-\|23S-rRNA-(adenine(2030)-N(6))-methyltransferase-RlmJ	gnl\|CDD\|225509	COG2961, ComJ, Protein involved in catabolism of external DNA [General function prediction only].	1.09306e-122
CP032839.1\|AYK17171.1\|840919_841237_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.5648e-42
CP032839.1\|AYK20179.1\|822909_823353_-\|DUF2390-domain-containing-protein	gnl\|CDD\|378196	pfam09523, DUF2390, Protein of unknown function (DUF2390). Members of this family are bacterial hypothetical proteins, about 160 amino acids in length, found in various proteobacteria, including members of the genera Pseudomonas and Vibrio. The C-terminal region is poorly conserved and is not included in the model.	2.54007e-11
CP032839.1\|AYK17162.1\|830526_831117_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	5.05856e-27
CP032839.1\|AYK17159.1\|825428_825842_+\|CBS-domain-containing-protein	gnl\|CDD\|341361	cd04584, CBS_pair_AcuB_like, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the ACT domain. The putative Acetoin Utilization Protein (Acub) from Vibrio Cholerae contains a CBS pair domain. The acetoin utilization protein plays a role in growth and sporulation on acetoin or butanediol for use as a carbon source. Acetoin is an important physiological metabolite excreted by many microorganisms. It is used as an external energy store by a number of fermentive bacteria. Acetoin is produced by the decarboxylation of alpha-acetolactate. Once superior carbon sources are exhausted, and the culture enters stationary phase, acetoin can be utilised in order to maintain the culture density. The conversion of acetoin into acetyl-CoA or 2,3-butanediol is catalysed by the acetoin dehydrogenase complex and acetoin reductase/2,3-butanediol dehydrogenase, respectively. Acetoin utilization proteins, acetylpolyamine amidohydrolases, and histone deacetylases are members of an ancient protein superfamily.This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria. Acetoin is a product of fermentative metabolism in many prokaryotic and eukaryotic microorganisms. They produce acetoin as an external carbon storage compound and then later reuse it as a carbon and energy source during their stationary phase and sporulation. In addition these CBS domains are associated with a downstream ACT (aspartate kinase/chorismate mutase/TyrA) domain, which is linked to a wide range of metabolic enzymes that are regulated by amino acid concentration. Pairs of ACT domains bind specifically to a particular amino acid leading to regulation of the linked enzyme. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	2.38966e-49
CP032839.1\|AYK17175.1\|843583_844345_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	7.82174e-150
CP032839.1\|AYK17174.1\|842544_843603_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	3.03267e-157
CP032839.1\|AYK17158.1\|823363_825274_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|236729	PRK10636, PRK10636, putative ABC transporter ATP-binding protein; Provisional.	0
CP032839.1\|AYK17169.1\|837973_838867_-\|DUF535-domain-containing-protein	gnl\|CDD\|377343	pfam04393, DUF535, Protein of unknown function (DUF535). Family member Shigella flexneri VirK is a virulence protein required for the expression, or correct membrane localization of IcsA (VirG) on the bacterial cell surface,. This family also includes Pasteurella haemolytica lapB, which is thought to be membrane-associated.	1.91564e-65

>CP032839.1|AYK17165.1|833460_833931_+|YhcH/YjgK/YiaL-family-protein
MITGSLNTLQRTPLPAPLARIMAEVVKSVAHWGDAPLGKTEIDGLNLFCLVSEDLTEPAADRRGEFHEQYLDIQLLLRGEEWIGVGPHDYVSDGADHPHPDLWFVDDEQTSYLALQPGDFAIFWPGELHRPLCTFNQPAKVKKLVVKVHKDLLAIA
>CP032839.1|AYK17164.1|832072_833179_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MTEVDRFADIRPYRDEEVPAAIERLIQDDEFIGAIAKYRFGSLMSWLGWAIRPMIRLFLRRKWSKVTTVHQVQMGVTRYMSRMIATSTKGVTFSGIEHLKKEQGYLFVSNHRDIAMDPAFVNWGLHTHGFDTVRIAIGDNLLRKPCATELMKLNKSFIVKRSAKGPREMMKALGELSAYIGNSVHEGHSIWIAQKEGRAKNGDDKTDPAILKMFYVDGKKQKIDFVDYMRSLNIVPVSISYELDPTDKAKARELYEKSVNGSYEKGEFEDIESIVAGIVGMKGRVHVSFGAPITEGFSDPDELAALIDKAIWSSYHLFPSNYLAADVSGKANTIEQAAFLTRQSEVPEEHKAIWRAMYAKPVENAKKA
>CP032839.1|AYK17163.1|831243_831942_+|aspartate/glutamate-racemase-family-protein
MKCIGLLGGMSWESTVSYYQALNRGVRAQLGGLHSARVLLNSVDFAGIERLQHAGDWPATARLLAAEARKLQDGGADFLLIGTNTMHKVAPEIEAAIDIPLLHIADATAAKLRADGITRVGLLGTRFTMEQDFYKGRLQDRFGLAVLVPDEAGRNRVHRIIYDELCLGEIRESSRAEYLAIIEALAAAGAEAVILGCTEIALLVGDARAAVPLYDTTAIHAEAAVALALASD
>CP032839.1|AYK17162.1|830526_831117_+|LysE-family-translocator
MDLNWLLPLAGFALVTCGTPGPNNMLLTSAGAAQGFRRTIPLLVGVVGGINLMILATALGLGVVFEKVPLLHDGLKLIGSAYLLWLAWKVATASGPAEGNRPLIPAHQGAMLQLLNPKAWMMALSAISGFTLAGEAYWPSALWVLVIFFITGLYTGAFWVLFGAQVRQIIRTARGWRRFNLGMGLATAACVAMIWI
>CP032839.1|AYK17161.1|829804_830401_+|LysE-family-translocator
MTMEWYVTLFGFAVLTCGTPGPNNLMLTASGANFGVRRTLPHLLGVGLGQPVLQLVLALGLYPLFERWPLLRLGLQIFGSLYLLWLAWRIAVAGAPGDPAQRARPLTMLEGLGFQFLNPKAWMMGISAISLFSLPGASYWSSQLAVMVMFALVALPVCFVWVLFGHQLSNWISSDRGWRRLNGSLGLLTALCVVMLWY
>CP032839.1|AYK17160.1|827787_828255_-|hypothetical-protein
MPPIRAALLLAPLLLGGCASSTTHQQLGAALNGLEGELQRLEEELAAMNGLHYQKAIDAPLSLRRALGAPQPTPEGLVPVASKLEDGPLLRYQYPLPAGMASLPQDNLCQRYEFELRHLGRLGKLELSWLGEQGKGSRLIRQSDCPFGTQVRPLQ
>CP032839.1|AYK17159.1|825428_825842_+|CBS-domain-containing-protein
MHIRDIMTTRVATVSMDDRLSVIKDIFEQAHFRHLLVLEEGELVGVISDRDLFRAISPYLDSEAEMSRDTETLTKRAHQIMSRHPVTIAPHLTVRDGVKLMLEKGVSCLPVLENGALVGIISWKDFLKAALESDALV
>CP032839.1|AYK17158.1|823363_825274_-|ABC-transporter-ATP-binding-protein
MIVASQIELIRGGRKLLDNASATIHPGHKVGLVGKNGCGKSTFFALVRGELAIDSGTFSLPAGWQIAGVAQETPALDCSALEYVIDGDKEFRSLEAQLAQAEQDDNGLLVAELHGRLDTIGAYSIRARAAELLHGLGFSDEQLSSPVRSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHLDLDAVIWLEKWLKGYQGTLVLISHDRDFLDSVISRIIHIENGKLNEYTGGYSDFELQRAEQLAQQQSMYEKQQREMSHMQAYVDRFRYKASKARQAQSRLKAMERMEKILPAHADSEFSFEFREPSALPTPLIAMENLSAGYGDKVILEKIKLNLVPGSRIGLLGRNGAGKSTFIKMLSGSNPPLSGKLEVSAGVSIGYFAQHQLETLRLDDSPLDHLARLAPDKTEQELRNYLGSFGFHGDKALDKVAPFSGGEKARLVLALITWQKPNLLLLDEPTNHLDLEMRHALTMALQGFEGAMVVVSHDRHLLRTTTDDFYLVHGGRVEPFDGDLDDYHKWLGEQEKEANAKPADGPVSANSAVARKDQKRREAEFRQATRPLRQKLEKLEASMEKLQGKLGDIESQLADPAIYEESAKTKLSELLKSQGPLKEQLEEVELEWMSLSEELETMEQAFFA
>CP032839.1|AYK20179.1|822909_823353_-|DUF2390-domain-containing-protein
MASERVAVHELPTPIGFWHWSGKVYGERSQDWLTVQELGGNVNLALLLHRLDQLGIVVDLTDLQPALVQTEAVLTPWRALRQSAKTRLDELQYQSMLAHELELERQQQGVLLQTLRSLSLFRGNSRNLLNYLSLLGAQQGPLRDLIC
>CP032839.1|AYK17157.1|822061_822916_-|23S-rRNA-(adenine(2030)-N(6))-methyltransferase-RlmJ
MLSYRHAFHAGNHADVLKHAVQALIIESLKKKEKPFIVLDTHAGGGLYDLRGDWSQKKAEYADGIGRLWDERAQWSAMAPYLGVIEEMNSDGQLHYYPGSPELSRRLTREQDKLALMELHNNEVEDLRANMGYDPRVAVHHRDGFEGLIALLPPTPRRGLVLIDPPYELKEDYFAVVDTLKKAQKRWATGIYALWYPILGQEADKSRGMLRAIKRENFGNVLVAELEVAGQTADWGMNGSGMLIISPPWMLDEQIEAFLKPLCAKLAQGAGAQYKVEWLNKAEG
>CP032839.1|AYK17166.1|834205_835405_+|acetate-kinase
MSKLVLILNCGSSSLKFAVMDAETGEDMLSGLAECFNLDDARIKWKLHGVKGEAMLGAGAAHQEALDHIVGHILPQDPTLAEQLVAIGHRIVHGGEQFSRSVRIDDGVIAGIEAAIPFAPLHNPAHLIGIRAALKVFPQLSEKNVAVFDTAFHQTLPQEAYLYALPHKLYREHGIRRYGAHGTSHRYIAEEAAKELGKPLNELNIINCHLGNGASVCAIKNGESVDTSMGLTPLEGLAMGTRSGDIDPAVVFFMHDQLGYSVEQINHTLTRESGLLGMTEASSDCRYVTTNYATDAGAKRALDVFTYRVAKYVGAYAAAMDGRLDAVVFTGGIGENAAMVREMVLNRLALFGFKVDKEANNAAVLGGEGRITTADSRCAMVIPTNEELVIARDALSLVC
>CP032839.1|AYK17167.1|835548_836790_+|miniconductance-mechanosensitive-channel
MKEAFFNWLSGLGVEVTSMMALVIALGFIVITSLLLHMALHRVLLVRLVGILGKAKQVWLPPQLQQRLFNRLAFVLQGAVLLGQAEIWLPRQSDSLKLIEMVAQLWILLFLLLAFFALLDCLLSVSRYTRLGRDLPLRGIFQGAKLVGSILVGILMIALLLGKSPLFLFSGLGAMTAVLMLVFKDPILGLVAGIQLSANRMLSVGDWLQMDKYGADGEVTDIGLTTVKVSNWDKTITTIPTYALISDSFKNWQGMTESGGRRIKRSVNIDMTSVRFLTAEEQLQLKQAQLLAPYLSRKEQELSAYNQQLSDALSCPINGRHLTNLGTLRAYLDAYLRAHPGIRKDMTLMVRQLAPTSDGLPLEIYCFTATTAWADYEGIQADIFDHIFAIIEQFHLRLHQSPTGYDMRAWQRG
>CP032839.1|AYK17168.1|836869_837904_+|L,D-transpeptidase
MPCRGEKWRPSLRAPDPLLISCQPRDVTSSHHHGKVMKLLRNSVATLCYSLLLTAAPVFAVEYALPAANSRLVGENLEYVVPAEENGQPLEAIAAKFQLGLTNMTEANPDADPLLVQTGEKLVIPQQLILPDAPREGIVLNVAEMRLYYYPKGKKVVEVLPIGIGQLGTDTPENWVTSVQRKKAGPTWTPTAKMHAEYAARGESLPAVWPAGPDNPMGLFALYIGKMYAIHGTNANFGIGLRVSHGCVRLRNDDIAYLFKQVPVGTRVQFVNQPIKASLEPNGVRYLEVHQPLSRSEEEFNSKLPAPLPMTPAVTRFIAHADSDSQLVKQALEQRNGMPMAINR
>CP032839.1|AYK17169.1|837973_838867_-|DUF535-domain-containing-protein
MSSHLSHLRTLARRLHPVEESGHLIRRAKYVGRLWLNPGARALYRQQQEQPLLAQAISRFPDILEKPIHPYRHKGLRKRLRAGLISGHYQQLARQLPKAQQLAIYSGRGLLLAQWQSDKLTAPLTLQLDYQTHMGKEGEMSLTLKLGDAALYYMALNLRPAPNPTLEICSLQGGKGQSEEIKLVTKACGGLRPMSLLVYMAAELARGLACKSLLGIRTQSHVYQSSKRTADRVKFDLDGLWQEHQGCVQDELWMSLPLEVPRKTLEEIPSRKRASYKARYQLLDQLGSELQTNLLRS
>CP032839.1|AYK17170.1|839193_840711_+|sodium/proline-symporter-PutP
MTASTPMLITFLVYIIGMVLIGFVAYRATRNFDDYILGGRRMGSWVTALSAGASDMSGWLLMGLPGAVFVSGISESWIAIGLVIGAYLNWRWVAGRLRVHTEKNRNALTLPDYFTYRFEDHSKVLRILSALVILLFFTIYCASGVVAGARLFESTFGMDYNTALWVGAAATITYTFFGGFLAVSWTDTVQATLMIFALILTPVFVIIAVGGIDSAMIEVAAKSATNLDMFKNLDVIAIVSLMAWGLGYFGQPHILARFMAADSHHSMANARRISMTWMVFCLAGAVAIGFFGLAYFARFPEVAAGVTVNPERVFIELSKILFNPWIAGVLLSAILAAVMSTLSCQLLVCSSAITEDLYKPFLRKNASQRELVWVGRLMVLLIAVIAIAVAMNPENRVLGLVSYAWAGFGAAFGPVVLLSVLWPRMTRNGALAGMLVGAITVIVWKQFGWLGLYEIIPGFLFALLAIVVGSLLGEAPSKAMLERFRDAEEEYNTPAESAGEPVAVN
>CP032839.1|AYK17171.1|840919_841237_+|cell-division-protein-FtsB
MRLFTLILILLLGGLQYDLWLGKNGLSDYQNLSEAISQQQRDNQTLKDRNDLIYREIDDLTSGLEAIEELSRNDLGYIKQGETFYRIIPKEKDKETAPDDEPYDD
>CP032839.1|AYK17172.1|841229_841922_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MTDASRVSGLTAIVPAAGIGSRMGADCPKQYLQLAGKTILEHTLERLLSHPAIAQVIVALAPHDRWFEALPVAADPRIVRVEGGAERAFSVLNGLHVAQGEWVLVHDAARPCLTHGDLDALIAAAMNCGGAILGSRVRDTMKRSDGEGNIIATVEREQLWHALTPQMFPTRALKRALEEGLILGATITDEASAMERAGFAVRMVEGRADNIKVTRPEDLSLAGLFLSQQA
>CP032839.1|AYK17173.1|842068_842545_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MMRIGHGFDVHKFGGVGPCMLGGVPVPYEQGLVAHSDGDVVLHAVSDALLGAIGAGDIGRHFPDTAAEFKGIDSRILLRDVFARVQKAGYAISNLDVTIIAQAPKMAPHIDAMCAVLAADLQCDLNRVNVKATTTEQLGFTGRKEGIATEAVVLLVKQ
>CP032839.1|AYK17174.1|842544_843603_+|tRNA-pseudouridine(13)-synthase-TruD
MLEQLAYLHGAPTARGILKAEAADFVVNEDLGFEPCGEGEHIFVRVRKTGENTAWVAGLLADAAGVNRNAVTWAGLKDRHAVTEQWFGIHLPGKAEPDLSVIESDSIQILQARRHNRKLRVGYLKGNHFTLRLTGLEQADGLEARLQAIATQGVPNYYGEQRFGRDGNNLEAAKAMFAGKRIKDRNKRSLYLSAARSMLFNAIVSARIEQGLAHQLLAGDCVMLKGSHSIFSEESVTPELEARLSSGDVQLTAPQWGRGRLASQGAAAEFEQAVLAPYSDWCDGLEKAGLDQDRRPLLLKPEQMSWQLDGEALTLSFFLPAGAFATSVVRELMQAEEADHGFRNQTDANSGQ
>CP032839.1|AYK17175.1|843583_844345_+|5'/3'-nucleotidase-SurE
MRILVSNDDGVHAEGIRALSEALRACGEVIVVAPDRNRSGASHSLTLEVPLRVTRIAENGFNGCESYAVKGTPTDCVHLAVNELVRPEPDMVVAGINHGANLGDDVIYSGTVAAATEGRHLGYPSIAISLVGKTHFATAAHYAALLVKGLMKHPLPADQILNVNVPDLPLEQIKGIKTTRLGNRHRAESVICTEDPRGQPIYWIGPPGSQQDAGDGTDFAAIEQGYVSITPLTIDMTAYDSLAGLGAWLDLQG

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Crispr_ID: CP032839_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032839_4

904205-904354

Orphan

Consensus_repeat	Method
TTCATGGTCAGTCTCCAAACCGCACGCGCGGATCAACGAGGGCAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032839_4

>merge|CP032839|4|904205-904354|CRISPRCasFinder
TTCATGGTCAGTCTCCAAACCGCACGCGCGGATCAACGAGGGCAACACAGATATCGGAGACGATATGGCGTGATATCAGCATCGGCATGGCAATAGAGGTCTGATTCATGGTCAGTCTCCAAACCGCACGCGGGGATCAACGAGGGCAAC

>CP032839|4|4|904205-904354|CRISPRCasFinder
TTCATGGTCAGTCTCCAAACCGCACGCGCGGATCAACGAGGGCAAC	ACAGATATCGGAGACGATATGGCGTGATATCAGCATCGGCATGGCAATAGAGGTCTGA
TTCATGGTCAGTCTCCAAACCGCACGCGGGGATCAACGAGGGCAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP032839.1\|AYK17210.1\|892619_893879_+\|NupC/NupG-family-nucleoside-CNT-transporter	unknown	unknown	gnl\|CDD\|224883
CP032839.1\|AYK17221.1\|908819_909584_+\|DUF3450-domain-containing-protein	unknown	unknown	gnl\|CDD\|378764
CP032839.1\|AYK17225.1\|911983_912619_+\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|367555
CP032839.1\|AYK17229.1\|915423_916344_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|182294
CP032839.1\|AYK17212.1\|894801_895713_+\|EamA/RhaT-family-transporter	unknown	unknown	gnl\|CDD\|273359
CP032839.1\|AYK17226.1\|912630_913872_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274350
CP032839.1\|AYK17223.1\|910964_911492_+\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|376576
CP032839.1\|AYK17228.1\|914914_915106_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK17216.1\|899065_900112_-\|dipeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236898
CP032839.1\|AYK17218.1\|901198_903016_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173862
CP032839.1\|AYK20181.1\|903165_904203_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226690
CP032839.1\|AYK17213.1\|895719_896733_-\|NAD-dependent-epimerase	unknown	unknown	gnl\|CDD\|187563
CP032839.1\|AYK17211.1\|893941_894745_+\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|235387
CP032839.1\|AYK17217.1\|900108_901167_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
CP032839.1\|AYK17215.1\|898352_898964_+\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
CP032839.1\|AYK17220.1\|906080_908711_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|369481
CP032839.1\|AYK17222.1\|909580_910954_+\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|376576
CP032839.1\|AYK17214.1\|896729_898109_-\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|223936
CP032839.1\|AYK17227.1\|913953_914916_-\|IS1595-family-transposase	unknown	unknown	gnl\|CDD\|372298
CP032839.1\|AYK17224.1\|911559_911967_+\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|376792

Protein	Function_ID	Function_description	E-value
CP032839.1\|AYK17210.1\|892619_893879_+\|NupC/NupG-family-nucleoside-CNT-transporter	gnl\|CDD\|224883	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism].	2.51569e-156
CP032839.1\|AYK17221.1\|908819_909584_+\|DUF3450-domain-containing-protein	gnl\|CDD\|378764	pfam11932, DUF3450, Protein of unknown function (DUF3450). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are about 260 amino acids in length.	1.36902e-94
CP032839.1\|AYK17225.1\|911983_912619_+\|energy-transducer-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	1.3769e-15
CP032839.1\|AYK17229.1\|915423_916344_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|182294	PRK10190, PRK10190, L,D-transpeptidase; Provisional.	6.15776e-148
CP032839.1\|AYK17212.1\|894801_895713_+\|EamA/RhaT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	4.90633e-09
CP032839.1\|AYK17226.1\|912630_913872_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	0.000139735
CP032839.1\|AYK17223.1\|910964_911492_+\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|376576	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family. This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.	6.05034e-19
CP032839.1\|AYK17216.1\|899065_900112_-\|dipeptide-ABC-transporter-ATP-binding-protein	gnl\|CDD\|236898	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional.	2.71898e-152
CP032839.1\|AYK17218.1\|901198_903016_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173862	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	1.79096e-169
CP032839.1\|AYK20181.1\|903165_904203_-\|ABC-transporter-permease-subunit	gnl\|CDD\|226690	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.56283e-104
CP032839.1\|AYK17213.1\|895719_896733_-\|NAD-dependent-epimerase	gnl\|CDD\|187563	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs. This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
CP032839.1\|AYK17211.1\|893941_894745_+\|deoxyribose-phosphate-aldolase	gnl\|CDD\|235387	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional.	6.53086e-132
CP032839.1\|AYK17217.1\|900108_901167_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	0
CP032839.1\|AYK17215.1\|898352_898964_+\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	1.05222e-36
CP032839.1\|AYK17220.1\|906080_908711_+\|TonB-dependent-receptor	gnl\|CDD\|369481	pfam07715, Plug, TonB-dependent Receptor Plug Domain. The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.	2.35842e-28
CP032839.1\|AYK17222.1\|909580_910954_+\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|376576	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family. This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.	9.03248e-32
CP032839.1\|AYK17214.1\|896729_898109_-\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	gnl\|CDD\|223936	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane].	0
CP032839.1\|AYK17227.1\|913953_914916_-\|IS1595-family-transposase	gnl\|CDD\|372298	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain. This domain probably functions as an integrase that is found in a wide variety of transposases, including ISXO2.	1.52601e-12
CP032839.1\|AYK17224.1\|911559_911967_+\|biopolymer-transporter-ExbD	gnl\|CDD\|376792	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR. This group of proteins are membrane bound transport proteins essential for ferric ion uptake in bacteria. The Pfam family consists of ExbD, and TolR which are involved in TonB-dependent transport of various receptor bound substrates including colicins.	6.05555e-30

>CP032839.1|AYK20181.1|903165_904203_-|ABC-transporter-permease-subunit
MNPVTLKKLKRFKSIKRGYYSFIIFTTLVLLSLLAELLVNSRALIVSYQGQLHFPTYGDVIPGQQFGLDYEYETNYRQLKAKFAAEGQGDWVLLPPVPWNPYEQDFKEDAYPPYAPNLAERHFLGTDTSGRDVLARLVYGFRIAIGFAFIALAASYAIGVTIGCLMGFLGGRFDLILQRFIEIWSQVPFLYVIMILVSLAKPNFGLFVAINVLFGWMGITWYMRTLTYKERARDYVMAARAQGATTGRIIFNHILPNTLMMIVTLAPFAVVGNISTLTALDYLGFGLAPPTPSWGELLSQGINNLDAIWIVSSVVAAVSLVLIMVSFIGEAIREAFDPRKFTRYQ
>CP032839.1|AYK17218.1|901198_903016_-|ABC-transporter-substrate-binding-protein
MKNKIKWIGALFVLVNGSWVWAASLPADLKWETNDTDPVFASPKALPGGSLNMFVESFPLTFRTVGPDSNGSFRSFILDNQLRLISFHPNTGNPIPSLATHWAIAPDSQTVYFKLDPRAKWSDGKPVNADDYTFGYEMMRSKHIKGPWFNNYYTTEVVAVEKIDDHTIMVKAGNRKAKMDLLNTTELWPQPKHYYKLTPNWVKQYNWAVVPTTGPYVISDVKKGKSVTFSKQKDWWAKDDRYNQHRFNIDTIKVQVIRDHNIAFRHFLKGEIDTFEMILPNWWHEKAVTPEYKKGYVQKVMAMTDTKQGGQGVHLNVANSKLADVNVRLGIQHAFNIDKIIETVLRGDYDRATTFDSGFGEFTDITLPERAYDIGKAREYFAKGGYDKPGPDGILQNEKGERLTLALTYTSQEHSKRLTVLKEEAKKAGLDLELNLVDGATGFKVMLEKKHEAAWLGWGGGGLYPQYWEFFHSANANKPQTNNLFNVADKELDALIDAYNVEFDMAKRAKLSQQIQQRIYDLAIFVPGVQLNYVRASSWRYVMLPEVPATKNTPDLLYWPMDGYPHSSGGLLWLDPKVKEETRNAKEAGEALAPINLLDKTYARH
>CP032839.1|AYK17217.1|900108_901167_-|ABC-transporter-ATP-binding-protein
MPNTQAPILDVPDNEGEFAVDHGQHQAPILEVRDLEVEFAVDDGKIKVLDGVSFKVAPGQTLGIVGESGCGKSVTSLAIMGLLPKPHGQVVAGSIRFQGEELLSLAPDQMYKVRGNRISMIFQEPMTALNPVQTVGEQLMEVFRLHRPEYDKAQRKAAAIAMLQKVGIPEPAQRFAVYPHNLSGGMRQRVMIAMALSCEPDLLICDEPTTALDVTIQAQILELMKELQAQTGMAIIFITHDLGVVAELCDEVVVMYAGRAVEQADVFELFDHPRHPYTHGLMSSIPRLEDEPKSLLKTIKGQVPALHEMPAGCRFSNRCPHATDLCISAIPAVEQLNPRHHVACHYWKELTP
>CP032839.1|AYK17216.1|899065_900112_-|dipeptide-ABC-transporter-ATP-binding-protein
MNTLLSVRDLKQHFRLGGGFLRKQYTVHAVDGISFDLKQGETLGLVGESGCGKSTLGRSLLKLFEPTAGTITFEGRDITALSPKEMRSLRQEMQMVFQDPAESLNSRHTVGQILEEPFIIHGKGNTEQRRGWVQELLAKVGLPGSAVDRYPHEFSGGQRQRIGIARAIALKPKLLVCDEAVSALDVSVQSQIVNLLLSLQREMNLSIIFIAHDLSVVKHISDRIAVMYLGRIVELADAQSLYLAPRHPYTQALISAIPVPDPRRRSQRILLTGDVPSPISPPSGCHFHQRCPHATELCKSKAPKLEACDESHHQVACHTPLAVGGHAISGSAISGNAMSGDSRLEQAS
>CP032839.1|AYK17215.1|898352_898964_+|YitT-family-protein
MDNTSIRTAHPIYEDVLALLTAAGFVSLGIFLFHQVGLLTGGTAGLALLLQKVTGISFGLLFFGINLPFYALAWLRMGPRFTFNTFVSVAAVSYMTDHLNGVLQIGKIEPLYAALIGGTLIGMGLLIMFRHKSSLGGFNILALFIQDRFGIRAGKLQMGLDCVIVVASFFVVQPWILALSIVAAVICNLVLTLNHKPGRYQIA
>CP032839.1|AYK17214.1|896729_898109_-|UDP-glucose/GDP-mannose-dehydrogenase-family-protein
MKVTIFGTGYVGLVQAAVLAEVGHQVCCVDVDDERIAALRLGQIPFYEPGLATLVESHLASGRLSFTVDPAIAVAHADLLLIAVGTPADEDGSADLQHVLTVADTIGQLMSRPKLVVTKSTVPVGTAQQVRQHIQAQLAERGLALECDVAANPEFLKEGAAVSDCMRPDRIIIGCDSETALEQLRALYAPFNRNHDRIVVMNLRSAELTKYAANAMLATRISFMNEMAALAEQLGADIEAVRQGMGADPRIGYHFLYPGCGYGGSCFPKDIQSLLHTARRVDCDTPLLAAVEQVNQRQQQKMAKRLLSHFGPDLRGRSFALWGLAFKPGTDDMREAPSRPLLAAIWAAGGRVQAFDPKAMERARQVYGQRPDLLLCPTQEAALEGADALLICTEWQAFRAPDFQQLKALLNQPVIIDGRNLYDPRQLSELGFDYHAIGRPHLPAKKQPANTSCNPETQP
>CP032839.1|AYK17213.1|895719_896733_-|NAD-dependent-epimerase
MIYLVTGVAGFIGFHVASQLCATGHRVVGIDNLNDYYEVSLKEARLAQLASFPHFYFERLDLADREAMAALFARHGFERVIHLGAQAGVRYSIDNPFAYADSNLTGMLTVLEGCRHHGIQHLIYASSSSVYGMGDQMPYSTAQQVDHPVSLYAATKKSGELMAHAYSALYGQPTTGLRFFTVYGPWGRPDMAIIKFTRAILAGEPIDVYNHGALSRDFTYIDDIVAGILAVADQPPRPNSDWHASEQSAAESAAPYRILNIGNGQPVRLLDFIEALEEAIGKPAIKRMLPMQAGDMHATWADSEPLHTLTGLRPATPLKQGVAEFVRWYLDYYRPAR
>CP032839.1|AYK17212.1|894801_895713_+|EamA/RhaT-family-transporter
MSHPHFHFVQAHGKVLLFTLLISLSFPIGSALTAVLDPLVVTWARYLLAALTFVTLLACQRRLVLPSLRDLGRYTLISLPALCYFVAMFVALQETSALDASALYTTVPLISALASMLMLQRRIGWSMAFALLGGMVAAALIIFRGELSQLASLSLTPSNRIYLLGCVGMALNPIVVKRYYRGESFAHLTCWTLICATLLLTLVAAPRLLATDWQQVSLTLWLGLAYLALFATALSFFLFQQGSVVLQPEQVSAYTYLIPVLVLLTGMLSGEEVIWRQVGWGVLGVLLTMAVMVLVPVRQARRA
>CP032839.1|AYK17211.1|893941_894745_+|deoxyribose-phosphate-aldolase
MIPDTVFEPVCTSTEAAIRAIRLMDLTSLNDDDHDARIIALCHQAQTPIGNTAAVCIYPRFVGLAKLTLAAQGTPEVRVATVVNFPHGDDDPATVLAEIRTALTDGADEIDLVIPWRALKAGDDMPARALVRGCKALCGTRRLKVIIESGELQDPALIRAASLLAIEEGADFIKTSTGKVPVNATPAACHIMLAAIAECGAQNQVGFKAAGGVKSVQDAAEYLAMAAAHFGNEWLVAEHFRFGASSLLGQLLATVEGKTPVAADGSY
>CP032839.1|AYK17210.1|892619_893879_+|NupC/NupG-family-nucleoside-CNT-transporter
MFAAGFLGMAVLILIAVLASTNRRAIRLRTVGLALALQVAIGALVLYVPLGRRALEGMAHGVDAVLASGKAGIHFLFGNLVNFSVDGIGFVFALNVLPLVVFFSALIAVLYYLGIMQVVIRFIGGAMARLLGTSQTESMSAVANVFVGQSEAPLVVKPYMPKMSDSEFFAVMCGGMASVSGTVLAGYAMMGIDMQYLLAASFMAAPGGILFAKLIIPETSQPDYVFDNSIQFDGKKPENVLAAAGEGASSGLKLAAAIGAMLIAMIGLVTLVNTLLGGVGEMVGMPLSLELILGWIFSPLAFLLGVPLADIGIAGAMIGKKLVVNEFVAYSDLSPYLKDASTVAAAGLQVLEEKSKVIISFALCGFANLASMGILIGGLGTLCPSRTDFIARYGLRTVLAATSSNLMSAAIAGIFFSLA
>CP032839.1|AYK17220.1|906080_908711_+|TonB-dependent-receptor
MLRKSRISAAIAFALASLAAAPSVSAEEGQNVEKLQKIKVTGSRISRVDVETAQPVQVMSKADIERSGLTSVGDILQRIPAISGQAQSTSVNNGGNGTVTVNLRGLGTQRTLVLVNGRRMVYGGSGANSSVDLNTIPVAIIERVEILKNGASSIYGADAVGGVVNIITKTGFDGFELNGQIGQTSKSDAEAHDVNMVAGGSTDVSNYVFSAGLVEEKEAMAGARSFSNVDYEHDGAGGQYIGGSSRVPWGYFKTSQGVLTKGPEGSATLRPYDSVADAYNYAPANYLKTPSKRWYTSFFGDRSLGQLGVLGETRFFSEASYLNRQSDYLLAATPLASGTDGLNPISKDNAFNTTGEDISDWRYRTIEAGGRNRMFDSSTSRLVLGFDGQLENSWTWDTAFVYGKTKTTESEQNVFMKDRINNAIGATSADGKQCLDSGGKVIAGCVPWNLFGGGLSQEALKYASFTRNDNGSNEQQSLEFNLSGDLLEWQAGTIGFATGYQVRKESGETNPDALVSLGNATGNAETATKGSYDVNSLYGELIVPLLSDKPFVESLEASVSSRYDNYSSFGDNIAMGYSITYRPYSDLMLRGTYSDVFRAPTISDLYSGKSQSFDPLTDPTGQDDDPQKPVYYGGNSELKPEQGYSTSLGAVYSPSYIENASLTVDLWSVKLDDVIDVVNPQYMLDQCFSSGQFCDKIDRAPDGKIMGIDATYANLNSLETNGIDFNVKYAYDFDFAMLAANWENSYLKKYEVTQPNGETLDYAGSFVSDQIGNYSKWRSTMSLDLFNEKVGGSWSARYIKGVTYTDSDIDFKVPSMVYHDLNARYQVTNELRLTAGINNVFDKTPPLILNALSANTDTVTYDVLGRTYYLRANYKF
>CP032839.1|AYK17221.1|908819_909584_+|DUF3450-domain-containing-protein
MKKALLGSLVSAALLTSFNLSAATAGQAVDAQAATDNASKVSQQKIDSYAESAESALAQYKAALRQVDSLRTYNEQVSKMVESQSAELASMQKQIAQIDQTSTEVVPLMLKMIDSLEQFVALDLPFQKVEREDRVAALTDLMNRADVTISEKYRKILEAYQIEEGFSRTIESYKASLDKDGSEKTYEFLRVGRIALLYQSPDGNETGMWNKKTRQWEELPQEYRSAVEQGLRIAKKQAPPALIKLPVQTAEKAS
>CP032839.1|AYK17222.1|909580_910954_+|MotA/TolQ/ExbB-proton-channel-family-protein
MKGIKLAIASLIAGATLVTLPVTAAEKPVDLNALLNQVKASSLSESQLNKEREARFLADKNEQGALLAKAKAELAAETAKGEQLKATFDANDKQLTELTETLRQRSGNMGEMFGVLRQFAGEFKGIFNASARRVEHPEQSALLTRLAESKELPSSNDLEAFWTTTLSRMVDGGKVSQIPATVVYGEGNQAEKTVTQIGEFNTVSEGKYLTFVPETGKFEQLSRQPEKSVLAPIAEFEQGGDGVKPIFIDPSRGVILSLLVQSPTLKERIDQGGSVGYVILALGVIGTLLAIFCGIRLSLIGSSMRKQLKSDQIIKGNPIGDMLGAYQSHRGDNIEDLESKLDEIILRNVPKFEKGISIIKLIASVAPLLGLLGTVVGMIATFQAITLFGTGDPKLMAGGISEALVTTMQGLVVAVPMLFLYTIVQTQSRRLIQVLEEQSAGFVARYQERLHASKAAA
>CP032839.1|AYK17223.1|910964_911492_+|MotA/TolQ/ExbB-proton-channel-family-protein
MWFWLIEEVESVRRFLGLGGDVLVALFFLTLMMWALLLERWFYFMAVYPKQVKQTKATWLARTDHLSWSAKQIRRELVSRVAMAVDKGMPVIKVLIALCPLMGLLGTVVGMVQVFDTLAITGTGSPRAMASGISKATVPTMAGMIAALSGLFFVNQLDHKAKLAVQKLEDNLKHG
>CP032839.1|AYK17224.1|911559_911967_+|biopolymer-transporter-ExbD
MRKRYSDSGADEAAIDLTPMLDIVFIMLIFFIVTTSFVKESGVEINRPSASTAETVKKGNIMVAVRENGQVWVDKRVVEVGAVRANIERLRAENPESAVVIQADNESRSGLVVQVMDQIRMAGVQNISIAADKSS
>CP032839.1|AYK17225.1|911983_912619_+|energy-transducer-TonB
MRYLISLAVSCVVVFFLFLGMNKLITPDHRELVEKDDVTMTDFIRLKPQETLQEKQRELPKPPPPKRPPPPPEMEVASTDRPKMESAPMDMPKLDIPVNIGGGNALGAYSTGGGGGGVGGNNGAIPLATFEPMMPRKAALAGLASGKVLVEFTVTERGTVSNVRIVKEEPRSYDLGKEARKTIAKWTFKPAMVDGKPQASRMQQEIEFAVN
>CP032839.1|AYK17226.1|912630_913872_+|tetratricopeptide-repeat-protein
MNKLHKMILAPVAMAVLLSTASWAAEQPALSDRAYRAVNKAQELITEKKYGEANAKLQDALSGAGERVYDKGVILQTLGFVAAQQEKYGQATKYFADAIATGGLPPPVAQQVRYNLAQLYMAEGNYQGSIKTMKEWFANQGKDDKPNSHAYITLANAHVQLKQYRDAIPAVDQAIKLSAGKAPESWYLLKMGAHYELKQYKPATEVLTSLVNMFPEKKKYWTQLSAMHMQAGNDAKALAALESAYNLGMLTEAAELQRLANYLAFTGIPHRAARVMEKGMKDGVIEQSASNYKTLANYWHQAKELDPAIDTLAKSYQLAPSAELQLKMARMMIQSKRYQDLVALAAKPAANANGEQRADLKFLTGVAYFEQQKPKEALNAFTQAAQNGNVSGRASPWISFLKEQNGTGEAAVQ
>CP032839.1|AYK17227.1|913953_914916_-|IS1595-family-transposase
MDTPAFQHLLSLFPQLTLRQRRVAQQELTAPHTITSLNTQLPACSGCPHCQADVTQLAPWGWSRGLRRYRCKLCLRTSTVLTKTPLARLRKAQCWEDYAQALIEGLTVRQAARRCGVSKNTAFLWRHRFLRAMATHQATREEGIVEVDETFFLESFKGQRGLPRPPRHRGGKGRTRGAGPDYIPVMVVQDRAGHHADFQLEKIDAETVIAVLKPLVSPDAVLCSDGAGVYACFSKEQGVTHQVVRNRQGERVVGAYHIQHVNGYHHRLKEWMERFHGVATHYLKNYLGWRRMLERYGKGVNIKACLHEALGRPMQHVIGT
>CP032839.1|AYK17228.1|914914_915106_+|hypothetical-protein
MMVDLKVMAYFKISLSTRNWDRAFFMVAASTGWWPTQGFIPLHANTEPPSTLAYLPGCDKRFS
>CP032839.1|AYK17229.1|915423_916344_+|LysM-peptidoglycan-binding-domain-containing-protein
MNPLRTAASALLCTFSLVSQQAAAVEYRLPAANSRLIGENQEYVVPADNRPLEQIAADFQLGLTNIMEANPGVDPYLPKAGSTLIIPHQLILPNAPREGIVINVAEMRLYYYPKGKNVVEVLPIGIGQLGVNTPENWITKVERKRANPTWTPTENIRRRYAAQGKTLPAVWPAGPDNPMGLHALYIGNLYAIHGTNATFGIGLRVSSGCVRLRADDIKYLFDNVPVGTRVQFVNQPVKTTVEPDGGRYMEVHEPLSRTEEEFNSTASVPLPMTPAITRFIAHAESDSNVVKQVLEQRTGMPTRLNP

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Crispr_ID: CP032839_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032839_5

953923-954018

Orphan

Consensus_repeat	Method
GGCGGTTTCGGTCTGGAAGTGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032839_5

>merge|CP032839|5|953923-954018|CRISPRCasFinder
GGCGGTTTCGGTCTGGAAGTGGTTGAGTACATCGGCGAGTAACATACTACCAGAGAAGTACCATCCCCTTCCGGGCGGTTTCGGTCTGGAAGTCGT

>CP032839|5|5|953923-954018|CRISPRCasFinder
GGCGGTTTCGGTCTGGAAGTGGT	TGAGTACATCGGCGAGTAACATACTACCAGAGAAGTACCATCCCCTTCCG
GGCGGTTTCGGTCTGGAAGTCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP032839.1\|AYK17253.1\|947564_948818_+\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
CP032839.1\|AYK17258.1\|954167_954638_+\|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl\|CDD\|234606
CP032839.1\|AYK17263.1\|960511_961486_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
CP032839.1\|AYK17251.1\|944078_946904_+\|TMAO-reductase-system-sensor-histidine-kinase/response-regulator-TorS	unknown	unknown	gnl\|CDD\|274362
CP032839.1\|AYK17247.1\|940456_941623_-\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
CP032839.1\|AYK17265.1\|962504_964373_-\|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl\|CDD\|235470
CP032839.1\|AYK17255.1\|950886_951996_+\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	unknown	unknown	gnl\|CDD\|182729
CP032839.1\|AYK17252.1\|946955_947240_-\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK17262.1\|958855_960412_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173863
CP032839.1\|AYK17250.1\|942961_944008_-\|TMAO-reductase-system-periplasmic-protein-TorT	unknown	unknown	gnl\|CDD\|236801
CP032839.1\|AYK17259.1\|954652_955066_+\|transcription-antitermination-factor-NusB	unknown	unknown	gnl\|CDD\|234686
CP032839.1\|AYK17264.1\|961488_962430_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
CP032839.1\|AYK17254.1\|950237_950687_+\|transcriptional-regulator-NrdR	unknown	unknown	gnl\|CDD\|234774
CP032839.1\|AYK17249.1\|942519_942924_-\|GFA-family-protein	unknown	unknown	gnl\|CDD\|226314
CP032839.1\|AYK20183.1\|955123_956083_+\|thiamine-phosphate-kinase	unknown	unknown	gnl\|CDD\|235583
CP032839.1\|AYK17248.1\|941769_942483_+\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711
CP032839.1\|AYK17256.1\|952051_952705_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|236455
CP032839.1\|AYK17261.1\|957061_958786_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224048
CP032839.1\|AYK17266.1\|964394_965285_-\|(2E,6E)-farnesyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|182567
CP032839.1\|AYK17260.1\|956079_956574_+\|phosphatidylglycerophosphatase-A	unknown	unknown	gnl\|CDD\|182942

Protein	Function_ID	Function_description	E-value
CP032839.1\|AYK17253.1\|947564_948818_+\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
CP032839.1\|AYK17258.1\|954167_954638_+\|6,7-dimethyl-8-ribityllumazine-synthase	gnl\|CDD\|234606	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional.	5.62066e-81
CP032839.1\|AYK17263.1\|960511_961486_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.54967e-113
CP032839.1\|AYK17251.1\|944078_946904_+\|TMAO-reductase-system-sensor-histidine-kinase/response-regulator-TorS	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	0
CP032839.1\|AYK17247.1\|940456_941623_-\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
CP032839.1\|AYK17265.1\|962504_964373_-\|1-deoxy-D-xylulose-5-phosphate-synthase	gnl\|CDD\|235470	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0
CP032839.1\|AYK17255.1\|950886_951996_+\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	gnl\|CDD\|182729	PRK10786, ribD, bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD.	0
CP032839.1\|AYK17262.1\|958855_960412_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173863	cd08498, PBP2_NikA_DppA_OppA_like_2, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
CP032839.1\|AYK17250.1\|942961_944008_-\|TMAO-reductase-system-periplasmic-protein-TorT	gnl\|CDD\|236801	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional.	1.05436e-137
CP032839.1\|AYK17259.1\|954652_955066_+\|transcription-antitermination-factor-NusB	gnl\|CDD\|234686	PRK00202, nusB, transcription antitermination factor NusB.	5.47456e-61
CP032839.1\|AYK17264.1\|961488_962430_+\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	6.46753e-103
CP032839.1\|AYK17254.1\|950237_950687_+\|transcriptional-regulator-NrdR	gnl\|CDD\|234774	PRK00464, nrdR, transcriptional repressor NrdR.	5.30495e-93
CP032839.1\|AYK17249.1\|942519_942924_-\|GFA-family-protein	gnl\|CDD\|226314	COG3791, COG3791, Uncharacterized conserved protein [Function unknown].	2.7862e-28
CP032839.1\|AYK20183.1\|955123_956083_+\|thiamine-phosphate-kinase	gnl\|CDD\|235583	PRK05731, PRK05731, thiamine monophosphate kinase; Provisional.	4.74098e-145
CP032839.1\|AYK17248.1\|941769_942483_+\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	1.96929e-132
CP032839.1\|AYK17256.1\|952051_952705_+\|riboflavin-synthase	gnl\|CDD\|236455	PRK09289, PRK09289, riboflavin synthase.	3.11528e-113
CP032839.1\|AYK17261.1\|957061_958786_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	0
CP032839.1\|AYK17266.1\|964394_965285_-\|(2E,6E)-farnesyl-diphosphate-synthase	gnl\|CDD\|182567	PRK10581, PRK10581, (2E,6E)-farnesyl diphosphate synthase.	7.218e-133
CP032839.1\|AYK17260.1\|956079_956574_+\|phosphatidylglycerophosphatase-A	gnl\|CDD\|182942	PRK11068, PRK11068, phosphatidylglycerophosphatase A; Provisional.	2.67848e-62

>CP032839.1|AYK17256.1|952051_952705_+|riboflavin-synthase
MFTGIIEAVGTLAELRRQGDDMALTVHAPGLDFSDVKLGDSIATNGVCLTVVALGDKSYTADVSLETLSRTGFAAARVGDRVNLEKALMPTSRLGGHLVSGHVDGVGEVKSVSSSGRAIEYWIKAPGELSRYIAEKGSIAVDGISLTVNAVQGDLFRLTIVPHTAQETTIASWKPGHKVNLEVDQIARYLERLMMGKRQESSASTLTMETLAKAGFL
>CP032839.1|AYK17255.1|950886_951996_+|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD
MFSQDDYQWMSRALELARRGRYTTAPNPCVGAVLVKDGVVVGEGWHQKAGEPHAEVYALRAAGDSARGATAYVTLEPCSHHGRTPPCAEALINAGVARVVAAMVDPNPQVGGRGLRMLSEAGIKTDFGLLASEAEALNPGFFKRMRTAFPRVTVKLGASLDGRTAMASGESQWITSPDARRDVQRLRARHDAVLSSAETVLADGASLTVRWDELPPSVKASYPKETLRQPLRVIVDSQNRLTPDLPLFQSESPVLLARHKASGEWPAWVQQLELPLLDGKLDLVSLFMLLAKQNVNSVLVEAGPRLCGALLEKGLVDELVLYQAPKLMGDEGRGLFHLPGLTRLFQAPKLAIKDVRMVGPDIRITAKIA
>CP032839.1|AYK17254.1|950237_950687_+|transcriptional-regulator-NrdR
MHCPFCSAVDTKVIDSRLVAEGHQVRRRRECLLCHERFTTFEMAELVMPRVIKSNGSREPFNEDKLRAGILRALEKRPVSMEAIEKAVNHIKSRLRATGEREVASELVGNLVMDELKSLDKVAYIRFASVYRSFEDIREFGEEIAKLEK
>CP032839.1|AYK17253.1|947564_948818_+|serine-hydroxymethyltransferase
MLKRDMTIANYDPQLWQAITDETRRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYPSKRYYGGCEYVDVVETLAIERAKELFGATYANVQPHSGSQANSAVYMALLQPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDDMERQAVEHKPKMMIGGFSAYSGIVDWARMREIADKVGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGLILSAADDEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKTYQAQVVKNAKAMAATFIERGYKIVSGGTDNHLMLVDLIGRELTGKDADAALGKANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAESIELTHWICDVLDNHDNDAVLATVREKVLDICRRFPVYG
>CP032839.1|AYK17252.1|946955_947240_-|hypothetical-protein
MDHLLTFVILAVFFLFYWVYYTSQRKHVPTTSWDQLPTKADYLAAHPESVDGDIIFCYHCGHHELLEVGMVHLTDFRREWVCAKCKQVLFREIE
>CP032839.1|AYK17251.1|944078_946904_+|TMAO-reductase-system-sensor-histidine-kinase/response-regulator-TorS
MRIFSGLGGKLLLAFSLMALLTLSASLLGWVGLSHLRQLEKGVQQTLADQELARTLSRLSGEIQSASRLLATATSEQEREHQGRLLTLQGQQLQQVLAQLGRGQGSTSLDQLSQSIIGNLGQQGWLVGERLTLMAQGEAQRARLVAAAGQIAELARSQMENAETVMVAGLGSLYQQQGEQATRTLDRLLEQDLDWLEQMTELRHRTLMQQQRIEEMWRSEQQGQLQALLQEGQRELAILQLRAGAVTDPARRQAVEQALSVLAQSDKLVQLRSDWLGKGEALRVLASANEALMSSLNQQVGELVSRARDSLGQSQQALSQRLRLLEQALMAIGLLTLLLLMLLMWRMVYGRIVWPLQRAVAGMSRLARGDLAPLEPIASTGRDELAELGRALQVFRDNAVELGRYQRELESRVEERTGQLSHANERLNEEVEKQRQARAEAEQANRAKSVFLATMSHEIRTPMNGILGGLTLLEDTHLSDTQQRYLAAIEHSGESLLEILNDILDYSKIEAGHVEARREPFPLFQLVDELSALFRPKAAAKGVTLALEYASGLAPVVEGDLGKLRQVLGNLLGNAVKFTARGQITLTVAPLVCHGPCAEPCIRFVVRDTGPGIPADEQEAVFEAFRQRKRDIGHQGGTGLGLAISRKLVAAMGGELNLVSESGKGCEFSFSLPLQRSSAQLPAEAQPLHLGQSRDILLVEDNEINRLVAHGMLTRLGHRVTLAEDGRSALALVTERPFELALLDINLPDMDGMTLREDLAAISEEMHERPLPAIAISAQMYPEDIRHCLAAGFVDFVGKPVRLAVLANAIDQLFRQEGASIEPQVQLSAAASSTNQPECANPVLDTDLPLLGIARIRQLVALFESQGRVLVDKLAQGEGSEQRQLAHKLKGSALALGLTEFASHCASLEAGCGEPAAIGAQFDAAVSGLQQWLAANRDAPF
>CP032839.1|AYK17250.1|942961_944008_-|TMAO-reductase-system-periplasmic-protein-TorT
MRSVYLSPLLLIWLLMLPRAALAFAVDIWPGGEFSGQPLRQQWQEPAAATKPLTLCALYPHLRDAYWLSVNQGMVDEAKRLGVKLQIHEAGGYGALVEQRQQLQRCVQEGSDAILLGAVSYQGLREAIKVTPLPVFGLVNDLPSGLVQAKVGVSWYQMGWQIGHWLAQRHPAGSKPVSVALFPGPQASGGNNFVEPGFADAIKGSAIKLVSTERGDNSREIQRTLVQQTLARYPDLDYLVGGAIAAEVAINELAQRHLDRPRVLGTYFSHGVQRGLRRGKILAANSDQMRLQGRLAVAQAVCLLQHPDANAEQCPRVMGPPILTLSAPLADPADSLSDGAFRPVYRVE
>CP032839.1|AYK17249.1|942519_942924_-|GFA-family-protein
MKELHASCLCGAVALTLPDQFDYMGNCHCSECRKFSGGDYASVGGLDGNKVTIVKGEEAIGRYRKSAETTLAFCRHCGSSLFSQKSSSGKINLRLGVLDDVPSQRPAFHIFVGSKAPWHQIGDDCPQFDTRPPV
>CP032839.1|AYK17248.1|941769_942483_+|two-component-system-response-regulator-TorR
MSYHILVVEDDAVTREKLTGYFEREGYRVTAVENGQEMRAMLAEQTVDLVMLDINLPGEDGLLLTRELRARSTVGIILVTGRSDAVDRIVGLEMGADDYVTKPFELRELLVRVKNLLWRISLAAAAPSEPAVADDAVRFGPWRFDIPRRQISKDGVPVRLTKAEYEVLVAFVAHAGRVLSRERILTLISHRGDGPSDRTIDVLIRRLRGKMEADPRDPQLFVTVHGEGYLFAGEIAS
>CP032839.1|AYK17247.1|940456_941623_-|pentaheme-c-type-cytochrome-TorC
MMKKLWHFLRTPSRRWSVLALLLVGVGVTLAGTVGLHYGFEKTSSLEFCISCHSMKDTVYPEYKESIHFKNASGVQAVCTDCHQPKDFVGKVARKMEAANDLYQEYIGHSIDTQEKFEDRRLHLAEKVWARMSSQNSKTCKSCHSYDNMDHAKQSPAAALAMKDAAAKNMNCIECHKGIAHELPNMAGGFRATYATLVNDAQEAPATETLYNLGEKDLYASEQSTDPVGKLLPASRIDVVDRSGDRLKVTIEGWRESDGKGRVLSEYMGKRVFVATIRDELKASEKVLKQETDSATHIKWEQVQVQAWVDGKGFESSLKPIWDYAGEMYKSTCNSCHGAPDPAHFTANGWISRLKAMSAYYRLSKEEERTLLKYLQNHAADTGGQGSH
>CP032839.1|AYK17258.1|954167_954638_+|6,7-dimethyl-8-ribityllumazine-synthase
MKVIEGNIAAPEARVAIVVARFNSFINDSLVNGAVDVLKRQGQVQDSNLTLVKVPGAVEMPLVIKKLAKSGQYDAIVAVGTVIRGGTYHFDLVANENSKGMAQVMMEYEIPVAFGVLTTENIEQAIERAGTKAGNKGAEAALAALEMINVLKELDV
>CP032839.1|AYK17259.1|954652_955066_+|transcription-antitermination-factor-NusB
MKPSERRKARHCATQAIYQWQMTKANVGDIEEQFKIDQDTKGVDLNYFRDLLFGVALHCSELDKVFAPFLSRPLEEVDMVDKAILRLATYELTRRDDVPPRVVINEAIELAKAFAADDSHKFVNGVLDKVIKSLNKR
>CP032839.1|AYK20183.1|955123_956083_+|thiamine-phosphate-kinase
MGEFELIDKYFKVPHARKDVVMGPGDDCALLTLPPDTQLAVSTDTLVSGVHFFPDMDPVDLGYKALAVNLSDLAAMGAEPRWVSLALTLPAINEGWVAGFAEGFLELAEYYNVALVGGDMTRGPLSITISVKGSVPAGRALMRSGAKAGDGIYVTGTLGDAALALSHLLGKRTLNENQLAAVLPRLDHPHPRILAGQALRGLAGSALDLSDGLASDLGHILKASGVRAQIDLDLLPLSPVLQDAVSEQDAWQLALAGGDDYELCFTVPQEHHGALDTALAHSGVKFTRIGRIVAGEPGIEYLRGDQAVELQLKGWDHFA
>CP032839.1|AYK17260.1|956079_956574_+|phosphatidylglycerophosphatase-A
MSLFRIKPELTRLDLKNPLHFLAVGFGSGLSPKAPGTMGTLAAIPLYLLVSGLPTYWFIALLAVGFVVGIRICQSATDAIGMPDHGAIVWDEVIGFGVTMIAAPAGWEWVVAGFALFRLFDVLKPWPISWFDRRIHGGLGIMLDDLIAGLFALFCMQLLAFWLG
>CP032839.1|AYK17261.1|957061_958786_+|ABC-transporter-ATP-binding-protein
MSLLEVKNLRIEYPSRYGVLAAVKDLSFSIEKGEIVGVVGESGAGKSTIGNAVIDLLSPPGRIARGDIYLNGELISGKSQNEMRAIRGSRIGFIFQDPMTSLNPLFTVEHQLVETILANTDLSREAAFAKALELMGAVGIPQPELRIKQYPHQFSGGMRQRVVIAIALSCDPELIIADEPTTALDVSIQDQILQLIRALCKERQVGCMLVTHDMGVVSNVTDKVAVMYRGDLVEFGLTEQVLGSPNHPYTRSLISAVPRSDVKLVRFPLVSYIEDASAPDTNIDLKTHWLGQSQDERAYEGALLRVENVDLKFVTKDSIFPSRRQYVRACNNISFEIFEGETFGLVGESGSGKSTIARAITGLYPPDTGKIFFEGIDLTALKSERERRPLRRQMQMVFQNPYSSMNPRMKVRDIIAEPIRFHQLASSESQIEGIVGDLLDHVGLGRGAGLKYPHEFSGGQRQRISIARALATRPRFLICDEPTSALDVSVQAQILNLLKDLQQELKLTMLFISHDLPVIRQMCDRIGVMQHGHLVEVAETEKLFTNAEHEYSRKLISLMPEFKGMSREGLEIAS
>CP032839.1|AYK17262.1|958855_960412_+|ABC-transporter-substrate-binding-protein
MKKGLSKIALALFAAGFAFSVSAADIKVGVASDATSLDPQEQLSGQTLEMSHLVFDPLMRYTQDLQFEPRLAEKFERVDDKTVRFHLRKGVKFHSGNDFTADDVVWTVNRLKSSVDFKAIFDPISEVKKVDDYTVDLITAKPFPLVLQTVTYIFPMDSKFYTGKTEAGKDKAEIVKNGDSYASTHVSGTGPFTVKFREQGVKLDYARNANYWDKASKGNVENLTVVPIKEDATRVAALLGGDVDMIYPVAPNDLERVKNGKDSQLVTLSGTRAIIIELNQNTNPALKDKRVRQAINYAINQVGIVEKINKGFGTPAGQLSPKGYAGHNEALVPQYDLAKAKELMKEAGYEKGFKMTFISPAARYVNDVKIAQAVSAMLAKINIKVDLKTMPVAQYWPEFDKCAADMQLIGWHSDTEDTANFFEFLTFTKDAKTGMGQYNCAGYANAEADKLVMDANAETDPAKRAEMLKKVEAMLIEDAAYVPLHWEDLAYGAKKNVDIKPVVNVMNFPYLGDLVVSK
>CP032839.1|AYK17263.1|960511_961486_+|ABC-transporter-permease
MFTFLLKRFYQAVIVMFVISLVAFSIQDNLGDPLRELVGQSVSEAQRHELREKMGLNDPFLIKYSRFLKNAVHGDLGTSYFFKRPALEVILDKLVATLELVFAAALIIVVVSIPLGVYSAIRPRSIPTKIIMAGSSIGISIPVFLTAIMLMYLFSIQLGWLPAYGRGETRNLLGWESGFFTWDGIKHLILPAVSLSSIMLPLFIRLVRSEMLEQLSSEYVKFARAKGLDNNKVYYQHALKNTMLPVITVGGVQIGTMVAYTILTESVFQWPGTGFLFLEAIHRVDTPLITAYVIFVGLIFVVTNTLVDLLYGLINPTVNLTAKG
>CP032839.1|AYK17264.1|961488_962430_+|ABC-transporter-permease
MSNAVTASPSRWARFKNSDIVYYFLRDKVAMLSFAVFVVFVLAALLAPWLAPHNVYDQTSFDLMDAELPPSWLEGGEERFWLGTDNQGRDIWSTILYGARISLTIGLFAVALQLVLGIVIGLIAGYFGGRIDNLLMRFADVQLSFSTMMVAIIISAIFQATFGSEFYSKFAIMMLVVIIGIAEWPQYARTVRASVLAEKKKEYVEAAKVMGFRAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGMPVDQPSLGSLISVGFNYIFSGSWWITAFPGICLVVLVLVINLLGDWLRDVFNPKIYKG
>CP032839.1|AYK17265.1|962504_964373_-|1-deoxy-D-xylulose-5-phosphate-synthase
MSVDISNFPNLALADTPVELRSLPKDRLPVLCNELREYLLRSVSRSSGHFASGLGTVELTVALHYVYNTPFDRLIWDVGHQAYPHKILTGRRDQIHTIRQKDGLHPFPWRGESEYDVLSVGHSSTSIGAALGMAVAAESEGLGRKVVAVIGDGAITAGMAFEALNHAGDVHKDMLVILNDNEMSISENVGALNNHLARVMSGKLYTTIREGGKKVLAGLPPVKELAKRAEEHLKGMVVPGTLFEEFGFNYIGPIDGHDIEALVETLRNMRNLKGPQLLHVKTKKGKGYEPAEKDPIGYHAVPKFNPDDCSLPKASSAKPTFSAIFGQWLCDMAAKDEKLVGITPAMREGSGLVKFSQQYPDRYFDVAIAEQHAVTFAAGLAIADKKPVVAIYSSFLQRAYDQVIHDVALQDLPVLFAIDRAGLVGADGPTHQGAFDISFLRTVPNMVVMTPSDENECRQMLYTGYLHQGPAAVRYPRGSSLSDAPISSEMQALALGKGRILREGKGTAILAFGTLLHHAKAAAEALDATLVDMRFVKPMDEALVLSLAASHDHFVTIEDNAIMGGAGSAVNELLMRNKQCKPILNLGLPDRFVEQGTQQEIYALLGLDDAGIQRSIESWLQA
>CP032839.1|AYK17266.1|964394_965285_-|(2E,6E)-farnesyl-diphosphate-synthase
MALDHFSRLHRQRIDDCLSAQLESLPAMAPRLRDAMSYGLLLGGKRVRPFLVYAVGEMLGVKSELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPMPDSLMANRVRMLSTLARASGYLGMCGGQALDLQAEGRQISLAELEQVHRHKTGALIECAVALGALCKADVDDATLAALQTYAAAIGLAFQVQDDILDITGDTATLGKPQGSDLALEKSTYPALLGLENARELARELHGKALTALQSLPYNTDILEAFADYIIERTH

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Crispr_ID: CP032839_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032839_6

1167710-1167840

Orphan

Consensus_repeat	Method
GCAACGGAGTAACTTGGCTTCAGGCCCTTTTATTTAGGATGTCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032839_6

>merge|CP032839|6|1167710-1167840|CRISPRCasFinder
GCAACGGAGTAACTTGGCTTCAGGCCCTTTTATTTAGGATGTCTTGGAGTTGAAACAGAAGAATATCAAGGCCGCTGCGCTCGGCTGCAACGGAGTAACTTGGCTTCAGGCCCTTTTATTAAGGATGTCTT

>CP032839|6|6|1167710-1167840|CRISPRCasFinder
GCAACGGAGTAACTTGGCTTCAGGCCCTTTTATTTAGGATGTCTT	GGAGTTGAAACAGAAGAATATCAAGGCCGCTGCGCTCGGCT
GCAACGGAGTAACTTGGCTTCAGGCCCTTTTATTAAGGATGTCTT

Protein	Signature genes	Signature genes Name	Protein_function
CP032839.1\|AYK17436.1\|1178948_1180094_-\|putative-C-S-lyase	unknown	unknown	gnl\|CDD\|275146
CP032839.1\|AYK17427.1\|1167842_1168697_+\|3-deoxy-8-phosphooctulonate-synthase	unknown	unknown	gnl\|CDD\|235363
CP032839.1\|AYK17422.1\|1163093_1164353_+\|glutamyl-tRNA-reductase	unknown	unknown	gnl\|CDD\|234592
CP032839.1\|AYK17423.1\|1164404_1165493_+\|peptide-chain-release-factor-1	unknown	unknown	gnl\|CDD\|234801
CP032839.1\|AYK17417.1\|1157401_1157998_-\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
CP032839.1\|AYK17421.1\|1162388_1162967_-\|outer-membrane-lipoprotein-LolB	unknown	unknown	gnl\|CDD\|377063
CP032839.1\|AYK17424.1\|1165554_1166406_+\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|274634
CP032839.1\|AYK17435.1\|1177445_1178867_-\|TAXI-family-TRAP-transporter-solute-binding-subunit	unknown	unknown	gnl\|CDD\|270286
CP032839.1\|AYK17418.1\|1158216_1160205_-\|bifunctional-metallophosphatase/5'-nucleotidase	unknown	unknown	gnl\|CDD\|277354
CP032839.1\|AYK17434.1\|1176406_1177321_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
CP032839.1\|AYK17430.1\|1172711_1173263_+\|hemerythrin	unknown	unknown	gnl\|CDD\|226454
CP032839.1\|AYK17419.1\|1160321_1161269_-\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|234929
CP032839.1\|AYK17425.1\|1166462_1166846_+\|invasion-protein	unknown	unknown	gnl\|CDD\|377264
CP032839.1\|AYK17426.1\|1166858_1167659_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225464
CP032839.1\|AYK17431.1\|1173431_1174232_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
CP032839.1\|AYK17432.1\|1174243_1174780_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl\|CDD\|176643
CP032839.1\|AYK17420.1\|1161540_1162389_-\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	unknown	unknown	gnl\|CDD\|234731
CP032839.1\|AYK17433.1\|1174979_1176236_-\|adenylosuccinate-synthetase	unknown	unknown	gnl\|CDD\|197875
CP032839.1\|AYK17429.1\|1171963_1172641_+\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|235376
CP032839.1\|AYK17428.1\|1170396_1170777_-\|autonomous-glycyl-radical-cofactor-GrcA	unknown	unknown	gnl\|CDD\|213978

Protein	Function_ID	Function_description	E-value
CP032839.1\|AYK17436.1\|1178948_1180094_-\|putative-C-S-lyase	gnl\|CDD\|275146	TIGR04350, aminotransferase_class_I_and_II, putative C-S lyase. Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A).	1.61725e-157
CP032839.1\|AYK17427.1\|1167842_1168697_+\|3-deoxy-8-phosphooctulonate-synthase	gnl\|CDD\|235363	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional.	0
CP032839.1\|AYK17422.1\|1163093_1164353_+\|glutamyl-tRNA-reductase	gnl\|CDD\|234592	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed.	0
CP032839.1\|AYK17423.1\|1164404_1165493_+\|peptide-chain-release-factor-1	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
CP032839.1\|AYK17417.1\|1157401_1157998_-\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	1.67432e-107
CP032839.1\|AYK17421.1\|1162388_1162967_-\|outer-membrane-lipoprotein-LolB	gnl\|CDD\|377063	pfam03550, LolB, Outer membrane lipoprotein LolB.	8.25372e-57
CP032839.1\|AYK17424.1\|1165554_1166406_+\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|274634	TIGR03534, RF_mod_PrmC, protein-(glutamine-N5) methyltransferase, release factor-specific. Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3. [Protein fate, Protein modification and repair].	7.06799e-124
CP032839.1\|AYK17435.1\|1177445_1178867_-\|TAXI-family-TRAP-transporter-solute-binding-subunit	gnl\|CDD\|270286	cd13568, PBP2_TAXI_TRAP_like_3, Substrate binding domain of putative TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This subgroup includes uncharacterized periplasmic binding proteins that are related to Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family. TRAP transporters are comprised of an SBP (substrate-binding protein) and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function.	3.28653e-114
CP032839.1\|AYK17418.1\|1158216_1160205_-\|bifunctional-metallophosphatase/5'-nucleotidase	gnl\|CDD\|277354	cd07409, MPP_CD73_N, CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	6.7685e-80
CP032839.1\|AYK17434.1\|1176406_1177321_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	6.68318e-38
CP032839.1\|AYK17430.1\|1172711_1173263_+\|hemerythrin	gnl\|CDD\|226454	COG3945, COG3945, Uncharacterized conserved protein [Function unknown].	1.16069e-19
CP032839.1\|AYK17419.1\|1160321_1161269_-\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	0
CP032839.1\|AYK17425.1\|1166462_1166846_+\|invasion-protein	gnl\|CDD\|377264	pfam04247, SirB, Invasion gene expression up-regulator, SirB. SirB up-regulates Salmonella typhimurium invasion gene transcription. It is, however, not essential for the expression of these genes. Its function is unknown.	4.4547e-21
CP032839.1\|AYK17426.1\|1166858_1167659_+\|hypothetical-protein	gnl\|CDD\|225464	COG2912, COG2912, Uncharacterized conserved protein [Function unknown].	4.40346e-57
CP032839.1\|AYK17431.1\|1173431_1174232_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.1128e-20
CP032839.1\|AYK17432.1\|1174243_1174780_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl\|CDD\|176643	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea. PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members.	1.86697e-60
CP032839.1\|AYK17420.1\|1161540_1162389_-\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	gnl\|CDD\|234731	PRK00343, ipk, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional.	0
CP032839.1\|AYK17433.1\|1174979_1176236_-\|adenylosuccinate-synthetase	gnl\|CDD\|197875	smart00788, Adenylsucc_synt, Adenylosuccinate synthetase. Adenylosuccinate synthetase plays an important role in purine biosynthesis, by catalyzing the GTP-dependent conversion of IMP and aspartic acid to AMP. Adenylosuccinate synthetase has been characterized from various sources ranging from Escherichia coli (gene purA) to vertebrate tissues. In vertebrates, two isozymes are present - one involved in purine biosynthesis and the other in the purine nucleotide cycle. The crystal structure of adenylosuccinate synthetase from E. coli reveals that the dominant structural element of each monomer of the homodimer is a central beta-sheet of 10 strands. The first nine strands of the sheet are mutually parallel with right-handed crossover connections between the strands. The 10th strand is antiparallel with respect to the first nine strands. In addition, the enzyme has two antiparallel beta-sheets, comprised of two strands and three strands each, 11 alpha-helices and two short 3/10-helices. Further, it has been suggested that the similarities in the GTP-binding domains of the synthetase and the p21ras protein are an example of convergent evolution of two distinct families of GTP-binding proteins. Structures of adenylosuccinate synthetase from Triticum aestivum and Arabidopsis thaliana when compared with the known structures from E. coli reveals that the overall fold is very similar to that of the E. coli protein.	2.59858e-174
CP032839.1\|AYK17429.1\|1171963_1172641_+\|uracil-DNA-glycosylase	gnl\|CDD\|235376	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional.	9.59003e-151
CP032839.1\|AYK17428.1\|1170396_1170777_-\|autonomous-glycyl-radical-cofactor-GrcA	gnl\|CDD\|213978	TIGR04365, Autonomous_glycyl_radical_cofactor, autonomous glycyl radical cofactor GrcA. This small protein, previously designated YfiD in E. coli, is closely homologous to pyruvate formate_lyase (PFL) in a region surrounding the stable glycyl radical that is prepared by the action of pyruvate formate-lyase activase, a radical SAM enzyme. When damage at the site of this radical breaks the main chain of PFL, this protein acts as a spare part that reintroduces the needed stable glycyl radical. Cutoffs for this model are set to exclude a set of closely related phage proteins that appear to have a corresponding function.	1.39246e-79

>CP032839.1|AYK17426.1|1166858_1167659_+|hypothetical-protein
MLHIDEWTDFEAHDITELALSVSDEIYGSVEEGMRELNLLDEWLDEQIEEGTCDEVRQQLLQGFYHSLGFHGDWQDYFSANNCDLNQVLVQRKGIPVSLGILIIQLGRKLGLDVEGICFPGHFLVSFAGGEGEVYVDPFTGDELSLARIELLLRGALGDLATLTPDYLQPSGQWEIIERLLNVSKGALLREDRMPEALRCSELLLRMKPGDPLETRDRGFIYEQLDCPRQAADDFEYFIEQCPDDPVADVLKVQLAALDLSPKPLH
>CP032839.1|AYK17425.1|1166462_1166846_+|invasion-protein
MVFVLKHLHLTLIAGAVLMFMLRFYWVQTATGRAYSAPVMKVSGWLNGLVVLSGVLLCMVLDLNPLNNGTPWLSEKLMAILVLVFLAAMALRLAKSNLVRWCSFLGALGWIYFIAKLAVLKQTSVFG
>CP032839.1|AYK17424.1|1165554_1166406_+|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MQIQQARAHIMTVLAGGESPRADADVLLCHLLDCRRSYLMTWPERELDAAQQATLQRWLARRLNGEPIAHLVGEREFWSLPLKVSPATLIPRPDTEVLVEQALTRIPQGPCAVLDLGTGTGAIALALKSERPEVDVWAVDRMADAAALARENSAALGLPIEVRDGSWFEPLGEPDRDETPRFAVIVSNPPYIDGADPHLEQGDVRFEPRSALVADDAGLADIRHIVAHAPAYLLADGWLLLEHGWDQGEAVRQLLRDGGYREVATVRDYGDNDRVTLGLCPLR
>CP032839.1|AYK17423.1|1164404_1165493_+|peptide-chain-release-factor-1
MNPSLIRKLEGLIERHEEVQAMLGEPDVVSDQDRYRALTREYAQLEDIVHAFQRYRQAQDDLETTQMMLEEDDADLREMAQEELPLAKANLEALEQELQLMLLPKDPKDDNNCYLEIRAGAGGDEAAIFAGDLFRMYSRFAERQGWRVSIVSCNDGEYGGYKEVIAKIDGERVYGRLKFESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSDLKIDTFRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRNLVGSGDRSERIRTYNYPQGRLSEHRINLTLYRLSEILEGDLDCVITPLVQEYQADQLASLAENN
>CP032839.1|AYK17422.1|1163093_1164353_+|glutamyl-tRNA-reductase
MSLLALGINHNTASVALRERVAFGPDCIDRALRELVSQPGVSEAVIVSTCNRTELYCNLEEERQEQVLRWLQQFHGLDAAELVTAIYQHHDEEAVRHLMRVACGLDSLVLGEPQILGQIKQSYAHAQQAESVKGALERLFQKSFSVAKRVRTDTEIGASAVSVAFAAVSLGRRIFSDLSQTKVLLVGAGETIELVARHLREQNVTKMMVANRTLQRAQTLAAEFGAQVMTLEEIPDYLHEADIVISSTASPLPIIGKGMVERALKARRFKPMFLVDIAVPRDIEAEVDELSDAYLYTVDDLQGIIEQNLETRKRAAAQAEVIVQEERDEFMGWYRGQSSVDLIRDYRHQSQQVADEELQRALLALAQGESAEQALKAMAHRLTNKLIHAPTQALRQAASQGDQSELSRLRQALGLSQEP
>CP032839.1|AYK17421.1|1162388_1162967_-|outer-membrane-lipoprotein-LolB
MLLRIFTLTCLLLLAGCATTQPQRDQVNWNQERTRLEQLTHWQLSGKMAIITPQQKGSARLNWQQDGEDYRLNLTSLIGTSILELSRSKGEITLLDSDGNRHQSQDAEALIYQLTGWNIPVAGLPEWIKGLPGQAEFELNPDSSLASVRDGQWQIVYGDYRDQDGYRLPHQLTMTGQNSRLKLQINQWTLAR
>CP032839.1|AYK17420.1|1161540_1162389_-|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase
MASTRWPAPAKLNLFLHVNGRRPDGYHELQTLFIFLNHSDWLEFEVIPNSDTLTLSPAIPGVPDEQNLIIRAARLLQAHLPSPQGAHIRLEKVLPMGGGIGGGSSDAATTLVALNHLWQAGLSEDELAALGVQLGADVPVFVRGKAAFAEGVGERLQSVELPDAWYLVLKPDCHVATAAVFQDPDLPRATPKMSLDNLLEGEWKNDCESLVKKRHPEVANALGWLLEYAPSRMTGTGACVFAQFEDEVTAREVLACVPKGLDGFVAKGENISPLFSTLQQFK
>CP032839.1|AYK17419.1|1160321_1161269_-|ribose-phosphate-pyrophosphokinase
MPDMKLFAGNATPELAQKIADRLFIKLDNAAVGRFSDGEISVQINENVRGGDIFIIQSTCAPTNDNLMELIVMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPVLLEDMKSKNLESPVVVSPDIGGVVRARAIAKLLDDTDIAIIDKRRPRPNVSQVMHLIGDVAGRDCIIVDDMIDTGGTLCKAAEALKERGAKRVFAYATHPVFSGSAVENIKNSVIDELIITDSIPLTAEMKAVGKVKQLTLSTVLAEAIRRISNEESISAMFEH
>CP032839.1|AYK17418.1|1158216_1160205_-|bifunctional-metallophosphatase/5'-nucleotidase
MNCLRPLLLATLTSALFACQPAKENPPFVLTLAHMNDTHSQFDPVNAEIKGQIFAQQGETDTLYTRFGGYPRLLTMAKAYQADALAKNQPLLLLHGGDAWQGSGYFKLNEGMANAELLSQFGLDAMALGNHEFDLDNQKLARFIEGVNFPVLAANLDTKADPALSKADNLKPFVVYAFDGNQKSPVTDLDNLPQGKQLVAVIGLVLEDMGNIAPNVGKLRFGKEVASAQATVDMLQAKGIHQIVALTHIGNERDLALAAKVNGLDAIVGGHSHSLLGDFRNIGWGKTGDYAKLVTNPDGIGKTCVVQAGSYAQAIGLAQVTFDSLGQVTDCQGHNSLLASRDFFADTARKQALDETRSKEASQFVDNQPNLVTVDEDPRLRGIIDSHYKPALEKAYGPVIGTIPEQLQNARRPGDNGSDSHGSDVAPLVAEGEFYWANTPAVQALTGSPVDFSLVAVGGVRADLPAGEWREGDSALTLLPFKNQLSVLTLTGAEVRGLLTETITATLPASAHAGKFPYGGHLRYTFQETDAGKAGTLTQLQRKTASGEWQDLVDSQRYRVVMNAYSANGNDGWQALANAQRHQSERVDIASVNGKLTAFPVLKVAQNGELLSAVYAPGQPLDCKASGVDCGTDAASFVEYVRDARPTLTALDEKTVTLLRAK
>CP032839.1|AYK17417.1|1157401_1157998_-|aminoacyl-tRNA-hydrolase
MTSEIKLIVGLGNPGPEYAKTRHNAGAWYVEQLARWHNVSLREEPKFFGHTARILVEGQDVRLLIPNTYMNLSGKAVAALARFYQIEPEAILVAHDELDLPPGIAKFKQGGGHGGHNGLKDIIAKMGNNNNFFRLRLGIGHPGSKEQVAGFVLTKAPSSEQNLIDAALDESLRATDILFKQDMTKAMNRLHSFKAEKG
>CP032839.1|AYK17427.1|1167842_1168697_+|3-deoxy-8-phosphooctulonate-synthase
MEQKNIKINQIDVANDKPFVLFGGMNVLESRDMAMAVCEKYVEVTSKLGIPFVFKASWDKANRSSIHSYRGPGLEEGMKIFQELKATFGMPVISDLHEPHQAKPVAEVVDVIQLPAFLARQTDLVEAMARTGNVINIKKPQFLSPSQMKNITDKFEECGNDQLILCERGANFGYDNLVVDMLGLGVMKKSTGGYPVIFDVTHSLQCRDPLGAASGGRREQVTELARAGMAVGLAGLFIESHPDPKIARCDGPSALPLEKLEGFLKQMKAIDDLIKGFEPLDTSA
>CP032839.1|AYK17428.1|1170396_1170777_-|autonomous-glycyl-radical-cofactor-GrcA
MIKGIQITQAANTALLNSFWLLDEEKQQARCICVKGDAFAADQEVQLAELGQFEYRELPVQAEPAVEGGQHLNVNVLRRETLEDAIENPEKYPQLTIRVSGYAVRFNALTPEQQRDVVTRTFTQSL
>CP032839.1|AYK17429.1|1171963_1172641_+|uracil-DNA-glycosylase
MLTWSDVIGSEKEQDYFKSTLATVRAEREAGKVIYPPATDVFNAFKLTELDQVKVVILGQDPYHGPNQAHGLCFSVLPGVRTPPSLVNIYKEMQRDLPGFVTPNHGFLESWAKQGVLLLNTVLTVQAGQAHSHAHLGWETFTDRVIEQINASCQGVVFLLWGAHAQKKGRFIDRQRHYVLTAPHPSPLSAHRGFIGCGHFSETNRLLEQQGKSPIEWKSVCIPLD
>CP032839.1|AYK17430.1|1172711_1173263_+|hemerythrin
MLSSLHKDHLNIARLLELLKHKLAAIRAEEPISYFLVRDVIDYLREVSDKYHHPKEDLIYDYYLKYRVVEGEVANRLQEEHVKLLEAGADLKEMVEMILMDAVIPLDQFTTKLERFVELQEAHMDYEEGVIFPHLRDSLTEDDWRHLEQNWQNRAIGDPLFGAEVSQHFQALAKRLSLPLTNG
>CP032839.1|AYK17431.1|1173431_1174232_-|AraC-family-transcriptional-regulator
MSTSLLQQSHYLGIRQQPLHRVLIYAPTLIWVTQGSKQLWWRERRLSFDRERWLLIPAGHQLTFVNQPEQGKFRSHAITLLTPPPPEWLAESASSHADLEEPAVKVTPGLAFCFELISTMAERGLSEATQAELLRGFYAELRAANALGLLFPASTMTLAERLARYLAVEPGIDHTLEAVAPHFSMSRASMVRKLAAEGRSFRQLLAQVRMSHALNLLQQGLTPLEVALACGYDSPSRFAARFKQEFGLTPHQYLHTCPSTLLSHAR
>CP032839.1|AYK17432.1|1174243_1174780_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MKLLKQSALLPLLCLTAMPAFAMTLKSTDIHEGQLMAKQFSFNGFGCSGDNHSPQLSWQDLPAGTKSVAITAYDPDAPTGSGWWHWLVVNLPATQSELASNASGKLKQGLEIRTDFGSQGYGGPCPPAGHGMHRYQFTAWALPHDLEVKADTPPAMVGYMLNSMALGKATLTATFVTP
>CP032839.1|AYK17433.1|1174979_1176236_-|adenylosuccinate-synthetase
MSSIVVVGANWGDEGKGRIVDYLAGQAGASIRFQGGNNAGHTVVNDLGTFKLHQVPSGVFNPDCLVVLGPGMVISPEKLTVELEEVKASGVTPKLAISDRATLCLPLHALEDTLEEQRLGDGAYGSTRQGIAPAYGDRVMKKAILVGWLKQPDVLVERIQFMLDWKLPQMKAIYPSFEFTQTAQEMADWLLEVSAPWIDAVCNVSMPLKALQAEGKTLLFEAQLGAGRDLIYGEYPWVTSSHVSGAYAGIGGGLPGLRPERVIAVAKAFSSSVGTGTLLTAMENQDEFRKITNEFGATTGRPRDVGYFDAVATKNGVELQAATEVALTKLDCLTGLPDLKICVAYEGAHTENPIWPQTAALKPVYEQMESWSEDITGCRTFEELPRAAQQYVLRIEELLGVPVPMVSVGPGRDEMILR
>CP032839.1|AYK17434.1|1176406_1177321_+|LysR-family-transcriptional-regulator
MLDIHWLQTFVTLARLQHFGQTATELHMTQPNVSLHIKRLEQATRVRLIERSPFRLTQAGERLLQSAERTIAELQLCQSDLNALNQLSQGTLAIAASDIISRLLLIQPFQRFKREFPGIDLTLFNTTSDQAAELVKAGKADLGFVMAQKRSEPLFYTELQQVTWCALGHGLARWQARAVVGESDPLDEPTLILLGHDTRTRALIDPSLPLLALPPCRIMEVGSVDAQLDWAEAGFGVAIVPDFSLHPRLNLTAPVTSLGDFPGTSLGYVVRQNQVLSRAIKQLLHWVEEEIQKPNPYLTRVMEP
>CP032839.1|AYK17435.1|1177445_1178867_-|TAXI-family-TRAP-transporter-solute-binding-subunit
MSLRILHHLLLPLCALSALLPFGSQALTIGTGPLNGVYYPTGGAICRVLNAGHALHGDSCTVQSTRGSMANLKALDKGDVQLALVQSDVLHHALHGTGPFSGQGANNELRSLFRLYQESLTLLAAPNSGITTLADIEGKRVYPGNKGAGEQITSQALMAAMGWQPGQFAAYKLKSDSEPLEGLCDGSLDAAFVVAGHPSLAVGDLISRCKVRLIPIEGEQIDRLLKQHPYYQRSRIAANLYPGQTTAINNIGMSAELVALASLPDPIVRTVRDTLLARVKQFSRLHPALSKVTLEQLQAHTELPLHAGMSDQPPAPLPLPPEQLTAEQLTPEPLTPAPSASEAVPTTGPVSAANGTTATLEAPSDATATSSAAVTTEATEVNPLPEEALEVAPELTAPTTEGESVAPSAAASTAPAPSAAVSTQLPQSASAATAPQEQAIQPASSAVTGETPQQDKTDTPPAPATSAATQLQP
>CP032839.1|AYK17436.1|1178948_1180094_-|putative-C-S-lyase
MFDFDQEVDRSGTMSLKWDKYKGQDVLPMWVADTDFVSPPSVIEALTKRAAHGIFGYSRPSPRLIELIIERVATRYGWAIEPEWLVFLPGVVPGLNLACKAWSQHGRGIITPKPVYYPFLQAPGFNDRPLLTVPMIEEAGRWVLDLEELERQAPAADLLLLCNPHNPGGTIFTRDELLAIDAIAARHNLVICSDEIHCDLLLDKNARHIPYGAISAQAAERCAVMMAPSKTFNIAGLCCSFAIIPNPRLRFRLQQAMRGISADVNLLGFVAAEAAYEGGEQWLTEQLDYLAANLALIQQAVARWPGVKLASHQATYLAWIDVSALGLADPIAFFEQAGVGLSPGAQFGDGQFVRLNFGCTRARLTDALARMERAILKHNKP

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Crispr_ID: CP032839_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032839_7

2246289-2246395

Orphan

Consensus_repeat	Method
CTGTTCTCACTGTGGCGAGCCGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032839_7

>merge|CP032839|7|2246289-2246395|CRISPRCasFinder
CTGTTCTCACTGTGGCGAGCCGGTGCTCGCCAGCGCCCCTGCTGCTTGCATTCTGCATTCAGGGGGGCATAACGCATGACCCCCTGTTTTCACTGTGGCGAGCCGGT

>CP032839|7|7|2246289-2246395|CRISPRCasFinder
CTGTTCTCACTGTGGCGAGCCGGT	GCTCGCCAGCGCCCCTGCTGCTTGCATTCTGCATTCAGGGGGGCATAACGCATGACCCC
CTGTTTTCACTGTGGCGAGCCGGT

Protein	Signature genes	Signature genes Name	Protein_function
CP032839.1\|AYK18214.1\|2235578_2238203_-\|aminopeptidase-N	unknown	unknown	gnl\|CDD\|237585
CP032839.1\|AYK18218.1\|2241664_2242126_-\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK18222.1\|2244652_2245636_+\|cytochrome-c-oxidase,-cbb3-type-subunit-III	unknown	unknown	gnl\|CDD\|129864
CP032839.1\|AYK18228.1\|2250720_2251668_+\|universal-stress-protein-UspE	unknown	unknown	gnl\|CDD\|236871
CP032839.1\|AYK18219.1\|2242341_2243832_+\|cytochrome-c-oxidase,-cbb3-type-subunit-I	unknown	unknown	gnl\|CDD\|237726
CP032839.1\|AYK18227.1\|2249813_2250569_+\|fumarate/nitrate-reduction-transcriptional-regulator-Fnr	unknown	unknown	gnl\|CDD\|183004
CP032839.1\|AYK18217.1\|2241112_2241571_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|224867
CP032839.1\|AYK18216.1\|2240371_2241010_-\|RNA-chaperone-ProQ	unknown	unknown	gnl\|CDD\|235322
CP032839.1\|AYK20260.1\|2253456_2254221_-\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK18233.1\|2256369_2257140_+\|spermidine/putrescine-ABC-transporter-permease-PotC	unknown	unknown	gnl\|CDD\|236542
CP032839.1\|AYK18220.1\|2243848_2244463_+\|cytochrome-c-oxidase,-cbb3-type-subunit-II	unknown	unknown	gnl\|CDD\|237725
CP032839.1\|AYK18226.1\|2249058_2249745_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|225392
CP032839.1\|AYK18230.1\|2252753_2253440_-\|DUF2987-domain-containing-protein	unknown	unknown	gnl\|CDD\|378595
CP032839.1\|AYK18232.1\|2255485_2256373_+\|spermidine/putrescine-ABC-transporter-permease-PotB	unknown	unknown	gnl\|CDD\|181910
CP032839.1\|AYK18223.1\|2245776_2246277_+\|cytochrome-C-oxidase-Cbb3	unknown	unknown	gnl\|CDD\|377555
CP032839.1\|AYK18221.1\|2244473_2244653_+\|CcoQ/FixQ-family-Cbb3-type-cytochrome-c-oxidase-assembly-chaperone	unknown	unknown	gnl\|CDD\|238647
CP032839.1\|AYK18231.1\|2254395_2255499_+\|spermidine/putrescine-ABC-transporter-ATP-binding-protein-PotA	unknown	unknown	gnl\|CDD\|236523
CP032839.1\|AYK18229.1\|2251742_2252651_+\|tRNA-2-thiocytidine(32)-synthetase-TtcA	unknown	unknown	gnl\|CDD\|236737
CP032839.1\|AYK18225.1\|2248886_2249075_+\|cbb3-type-cytochrome-oxidase-assembly-protein-CcoS	unknown	unknown	gnl\|CDD\|377073
CP032839.1\|AYK18215.1\|2238347_2240363_-\|carboxy-terminal-processing-peptidase	unknown	unknown	gnl\|CDD\|236873

Protein	Function_ID	Function_description	E-value
CP032839.1\|AYK18214.1\|2235578_2238203_-\|aminopeptidase-N	gnl\|CDD\|237585	PRK14015, pepN, aminopeptidase N; Provisional.	0
CP032839.1\|AYK18229.1\|2251742_2252651_+\|tRNA-2-thiocytidine(32)-synthetase-TtcA	gnl\|CDD\|236737	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional.	0
CP032839.1\|AYK18222.1\|2244652_2245636_+\|cytochrome-c-oxidase,-cbb3-type-subunit-III	gnl\|CDD\|129864	TIGR00782, di-heme_cytochrome_cp, cytochrome c oxidase, cbb3-type, subunit III. This model describes a di-heme subunit of approximately 26 kDa of the cbb3 type copper and heme-containing cytochrome oxidase. [Energy metabolism, Electron transport].	8.96679e-82
CP032839.1\|AYK18228.1\|2250720_2251668_+\|universal-stress-protein-UspE	gnl\|CDD\|236871	PRK11175, PRK11175, universal stress protein UspE; Provisional.	0
CP032839.1\|AYK18219.1\|2242341_2243832_+\|cytochrome-c-oxidase,-cbb3-type-subunit-I	gnl\|CDD\|237726	PRK14488, PRK14488, cbb3-type cytochrome c oxidase subunit I; Provisional.	0
CP032839.1\|AYK18227.1\|2249813_2250569_+\|fumarate/nitrate-reduction-transcriptional-regulator-Fnr	gnl\|CDD\|183004	PRK11161, PRK11161, fumarate/nitrate reduction transcriptional regulator Fnr.	0
CP032839.1\|AYK18217.1\|2241112_2241571_-\|GAF-domain-containing-protein	gnl\|CDD\|224867	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms].	1.38652e-85
CP032839.1\|AYK18216.1\|2240371_2241010_-\|RNA-chaperone-ProQ	gnl\|CDD\|235322	PRK04950, PRK04950, ProP expression regulator; Provisional.	1.22566e-106
CP032839.1\|AYK18233.1\|2256369_2257140_+\|spermidine/putrescine-ABC-transporter-permease-PotC	gnl\|CDD\|236542	PRK09500, potC, spermidine/putrescine ABC transporter membrane protein; Reviewed.	1.9067e-147
CP032839.1\|AYK18220.1\|2243848_2244463_+\|cytochrome-c-oxidase,-cbb3-type-subunit-II	gnl\|CDD\|237725	PRK14487, PRK14487, cbb3-type cytochrome c oxidase subunit II; Provisional.	1.74196e-145
CP032839.1\|AYK18226.1\|2249058_2249745_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|225392	COG2836, COG2836, Uncharacterized conserved protein [Function unknown].	2.3134e-42
CP032839.1\|AYK18230.1\|2252753_2253440_-\|DUF2987-domain-containing-protein	gnl\|CDD\|378595	pfam11205, DUF2987, Protein of unknown function (DUF2987). This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.	2.27649e-47
CP032839.1\|AYK18232.1\|2255485_2256373_+\|spermidine/putrescine-ABC-transporter-permease-PotB	gnl\|CDD\|181910	PRK09497, potB, spermidine/putrescine ABC transporter membrane protein; Reviewed.	8.69905e-154
CP032839.1\|AYK18223.1\|2245776_2246277_+\|cytochrome-C-oxidase-Cbb3	gnl\|CDD\|377555	pfam05751, FixH, FixH. This family consists of several Rhizobium FixH like proteins. It has been suggested that suggested that the four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalyzed by FixG.	1.60706e-43
CP032839.1\|AYK18221.1\|2244473_2244653_+\|CcoQ/FixQ-family-Cbb3-type-cytochrome-c-oxidase-assembly-chaperone	gnl\|CDD\|238647	cd01324, cbb3_Oxidase_CcoQ, Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322, or cd01323 for more information on cbb3 oxidase.	2.84001e-09
CP032839.1\|AYK18231.1\|2254395_2255499_+\|spermidine/putrescine-ABC-transporter-ATP-binding-protein-PotA	gnl\|CDD\|236523	PRK09452, potA, spermidine/putrescine ABC transporter ATP-binding protein PotA.	0
CP032839.1\|AYK18225.1\|2248886_2249075_+\|cbb3-type-cytochrome-oxidase-assembly-protein-CcoS	gnl\|CDD\|377073	pfam03597, FixS, Cytochrome oxidase maturation protein cbb3-type.	2.14655e-16
CP032839.1\|AYK18215.1\|2238347_2240363_-\|carboxy-terminal-processing-peptidase	gnl\|CDD\|236873	PRK11186, PRK11186, carboxy terminal-processing peptidase.	0

>CP032839.1|AYK18223.1|2245776_2246277_+|cytochrome-C-oxidase-Cbb3
MTQPLSKPWYRQFWPWFIIALPTAAVVGSIATAIIASKDGVNLVAEDYYKQGKEINQDLSKFDRSEALNIRFGLEVDGNELTLKPISGDIPAGQALYLSLFHPTLAGQDSEHMITADASGTYRLHFDKPLVGKWHIRVDAFDHQWRLQETVQLPTLGPVELDPKGR
>CP032839.1|AYK18222.1|2244652_2245636_+|cytochrome-c-oxidase,-cbb3-type-subunit-III
MSTLFSIFVTVISLGTILGCFLLLMWCRKDKMGVEEGKSMGHSFDGIEEINNPLPKWWTYMFLFFIVTGLVYLVAFPGLGNFKGLLGWQSSNQDVRSLAESKAATESAKAEGRAVEYDREVAKADEIYGAKFRELTYEADGKTYRAITEIAKDPEALKVGQRLFLQNCSQCHGSDARGGRGFPNLTDSEWQWGGQPDQIKTTIMGGRQGIMAAWGEILGKDGVQEVASYVLSLSGRKVDLVEAKKGEARFAICAACHGADAKGGVAVGAPDLTNNTWLYGGSREVVVQTITHGRHGVMPAWKDILGEDKVHLLASYVYSLSHQQSAK
>CP032839.1|AYK18221.1|2244473_2244653_+|CcoQ/FixQ-family-Cbb3-type-cytochrome-c-oxidase-assembly-chaperone
MDYGTFRGLYTLLLMAIMIGIIVWAYSKRRKTSFDEAANLVFADDEQPGADKKNAGAKQ
>CP032839.1|AYK18220.1|2243848_2244463_+|cytochrome-c-oxidase,-cbb3-type-subunit-II
MSNNNRHEIFEKSVPMLVVGIIFAISLGGLVEITPLFFQKQTTEPVEGLKPYTALQMEGRDIFIREGCTNCHSQMIRPFRAETERYGHYSVAGESVWEHPFLWGSKRTGPDLARVGGRYSDEWHKVHLINPRDVVPESNMPAYPWLDTNVLTGEMTAKKLALFRDHFGVPYTDADIQGAGEAVKGKTELDALVAYLQSLGHALK
>CP032839.1|AYK18219.1|2242341_2243832_+|cytochrome-c-oxidase,-cbb3-type-subunit-I
MKPVRSSGYKTKQQQHRKRNITMSHTTNHPEYNYTVVRQFTVMTIVWGIVGMSVGVLIAAQLIWPALNFETPWLTYSRLRPLHTNAVIFAFGVSALMATSFYVVQRTCQTRLFGGPLATFVFWGWQAIILSAAISLPLGYTSAKEYAELEWPIDIAITVVWVAYAIVFFGTLMKRTTSHIYVANWFFGAFIITVAVLHIVNNMEVPLSGMKSYSMYSGAMDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSYRLSIVHFWALISLYIWAGPHHLHYTALPDWAQSLGMVMSLILFVPSWGGMINGIMTLSGAWHKLRYDPILRFLIVSLSFYGMSTFEGPMMAIKTVNALSHYTDWTVGHVHSGALGWVAMVSIGAVYHLIPNLFGQGRMYSVKLINVHFWLATVGTVLYIVAMWISGVMQGLMWRAVNEDGTLTYSFVEALQASYPFYFVRFLGGCFFVTGMLLMAYNAYRTITAPKGSLEPVAQPA
>CP032839.1|AYK18218.1|2241664_2242126_-|hypothetical-protein
MKERLTARKVLHLVLVLALLLALMAYRTWFSADNSVSADQKKDQICDLSHTPCSALIGDKPLTVAIKELPLRAEHDFAIAITGGDPAIKPVKATLEGKDMFMGTIPVSFEEIDGQWQGVTQVGSCTSPVMIWLLNIEWSNGQRQQLALSVARE
>CP032839.1|AYK18217.1|2241112_2241571_-|GAF-domain-containing-protein
MIEKQPFYRTLNQQAKALLEGETDLIANLANLSALLNQELAEINWVGFYLLQGETLVLGPFQGKPACVRIPVGRGVCGTAVAEGRTQLIDDVHQFDGHIACDGASNSEIVIPVRRGGEIIGVLDIDSPIFNRFDQQDRIGLEETVQILESML
>CP032839.1|AYK18216.1|2240371_2241010_-|RNA-chaperone-ProQ
MENTEKLKNSKEIVAYLVEKFPACFVAEGEAKPLKIGIFQDLAERLADDARVSKTMLRSALRQYTSSWRYLHGLKAGQARVDLDGNPGELLTEEHIEHAKQALKESKERVFASRRTNTKEKDEKAKKPRRPAVRKTEKADVAAKPKAAAKAPVADAPLVKVDAATLKVGQDVRVVMGKFPVPATIKEVTKDDVQVQLQTGMMVRVKSEHLVL
>CP032839.1|AYK18215.1|2238347_2240363_-|carboxy-terminal-processing-peptidase
MLKHGVIRFSLVACSLALAGLAQAIEPVLKESDLPVLAQESQHATASKRITNLFTRSHYKQFKLDDAFSSVIFDKYLENLDYSRNLFLASDISRFEKYRNGFDTDLERGRLAPAYEMFNLSQQRRYERFEYALKLLDTPFDFTQTDNYVFDREGAAWPKDEAELNELWRQRVKFDALSLKLSGKEWPEIKELLGKRYNNAIKRMSQTESEDVFQLFMNSFARAIEPHTSYLSPRSADRFNTEMNLSLEGIGAVLQAEDDFTVIRSLVPGGPAAKSNHLKPDDKITGVGQEDGKIVDVIGWRLDDVVELIKGPKGSKVKLEIQRGKGATAKTEQIELTRDKVRLEDRAAKSKVINAEGKKIGVIEIPSFYVNLHDDVIKELSSLNKKKIDGLIIDLRGNGGGALTEASALSGLFFASGPVVQIRDHMGRITVNGDDDGNVYYGGPMSVMIDRYSASASEIFAAAMQDYGRALILGENSFGKGTVQQHRSLAKVYDFYEQPLGHVQYTIAKFYRIDGGSTQNKGVAPDISFPTPVAPEETGESREFNALPWDKIASANYEKLGNFASVLPKLQAAHDARIAKDPEFAYVMQDIADYKEEKDKKSVSLNEAERVAEQAKQDEKALKRTNERLARLGKPAVKSLDELPADFEAPDEYLIEAANITADLAKVSKRS
>CP032839.1|AYK18214.1|2235578_2238203_-|aminopeptidase-N
MTDHSQAMTAKYRQDYQAPLYWIDTIDLDFQLQEPLTQVTAITRIRRNGEHNAPLVLDGEQLTLKSVAIDGIPCDHYEQGESSLTLFNLPAECVLTIVTLLDPAANTALEGLYKSGDAYCTQCEAEGFRRITYYLDRPDILARYSTRITADKAQFPFLLSNGNKVDSGDLDGGRHFVQWQDPFPKPSYLFALVAGDFDVERSHYTTKSGRKVALEIFVDKGNLDRAGFAMESLINSMRWDEQRFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKFVLANPATATDSDYHGIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRGVNRINNVRTVRGPQFAEDAGPMAHPIRPDVVIEMNNFYTLTVYEKGSEVIRMMHTLLGEEAFQAGMRLYFERHDGSAATCDDFVQAMEDASGVDLGRFRRWYSQSGTPELTVTDEYDAASGIYRLHVSQHTPPTQDQPQKLPLHIPLDIELYDEQGAVIPLQYQGKAIGNVLDVLEAEQTFEFDRVLVKPVPSLLRDFSAPVKLHYDYSDEALAFLMRFARNEFARWDAAQMLINKAVIDGVARVQHGQRLELSQTLLAAFVAILDDSELDLALKAEILALPGEATLAELFEVADIDAIHQVRDAIHTRLAEAFGARLAATYQSLRLNGYQVVHAEMAKRALKGVVLGYLAALDAEHADALVREQYATADNMTDTLAALQVANGYLLPCRAALLADFEGKWAKDGLVLDNWLRLIGSKPAADVLSEVKQAMSHPTFSIRNPNRLRALIGSFAMSNQVQFHAVDGSGYRFLTDLLIELNQVNPQVASRLITPLIQFKRLDEARKALIRAELTRLANLEGLARDLFEKVSKALQQ
>CP032839.1|AYK18225.1|2248886_2249075_+|cbb3-type-cytochrome-oxidase-assembly-protein-CcoS
MNIIFVLIPIAILFVIIAGVVFFWAIRSEQFEDLDRQGSNILFDEEQPAHKPVKPADHDPQP
>CP032839.1|AYK18226.1|2249058_2249745_+|sulfite-exporter-TauE/SafE-family-protein
MTHNLDLAGALLVGLAGSAHCIGMCGGVSAALSMAIPANKQHFWGRLAYLLNYNLGRILSYVIAGALVGGLLATTSELGAGKHAIAGLRLVAALLMIALGLYLAGWWQGILLLERLGARLWPRIKPLAGKFLPFTSPVQALPFGMVWGWLPCGLVYSMLTWSAAAGSASGGALIMLFFGLGTLPTLFALGGLADRLRYWLTLRSLRLGGALLLILFGVHTFWIGIASF
>CP032839.1|AYK18227.1|2249813_2250569_+|fumarate/nitrate-reduction-transcriptional-regulator-Fnr
MIPEKKPGRRIQSGGCAIHCQDCSISQLCITFTLNDNELDQLDSIIERKKPIQKGEELFKAGDEFKSLYAIRSGTIKSYTITEQGDEQITAFHLAGDLVGFDAINKQAHPSFAQALETAMVCEIPFEVLDDLSGKMPKLRQQIMRLMSSEIMGDQEMILLLSKKNAEERLAAFLHNLSVRFSERGFSAKEFRLSMTRGDIGNYLGLTVETISRLLGRFQKSGLISVKGKYITVLDQVALGMMAGATRPPCG
>CP032839.1|AYK18228.1|2250720_2251668_+|universal-stress-protein-UspE
MVKYQNILVVINPEEERQIALERAVKVAELDENAHLTLLLTIYDFSYEMTAMLSVDERQEMRDGVISQRREWLDEILTPYRAQGIECEVKVVWHNRPFECVIQEVLEQRHDLVVKATHHHSFLQTFIFTPTDWHLLRKCPCPVLLVKEGHWQRGGNIIAAINCSSDDPDQKLLNERITQEGSDIAELLGSNLYLVNTYPGTPVNVAIELPEFDPNAYNEAIRKHHESLLLSHADKFGIGHLWTRVAEGLPEEVLPDMAEELKATLMIMGCVGRTGLSAALLGNTAEHVIDRLSCDILILKPADYSCPVDSRRNQS
>CP032839.1|AYK18229.1|2251742_2252651_+|tRNA-2-thiocytidine(32)-synthetase-TtcA
MLEELNAKEKYSFNKLQKRLRRNVGQAIADFNMIEEGDKVMVCLSGGKDSFGMLDILMSLKASAPIHFDLVAVNLDQKQPGFPEHVLPEYLDSLGIEYKIVEEDTYSIVKEKVPEGKTTCSLCSRLRRGILYRTAQELGCTKIALGHHRDDILETLFLNMFYGGKLKSMPPKLVSDDGKNVVIRPLAYCKEKDLIRYADVKAFPIIPCNLCGSQENLQRQAIKQMMQDWDRRFPGRIETMFTAIQDVIPSHLLDHKLFDFKSINRDSGIIDGGDKAFDPPEMPKAPLLDIDEMDMLDVIEVR
>CP032839.1|AYK18230.1|2252753_2253440_-|DUF2987-domain-containing-protein
MTRRYGVTKAVRQSLLATLLLPGLALAEPVLDLQYSTFYSQMKTFAKGEFGHARLGFYLTDPQNGQRCGLTFARVATDSKEVAGEVTVDSELRLPFDEDLNLDKGIVTVGLKEEHATCDMTVQVMADAPNGPELPLAELAARQQQMQLLLDKMAGMVGKHFLPKMEGVRITLVQQSGTAYLIDGARQEALPWQEGHLLLSNEQLAAFAAGQLRLQGDVLRLTPWLHKG
>CP032839.1|AYK20260.1|2253456_2254221_-|hypothetical-protein
MLDSQLSNKMRIGGSLEQSLNQGYRLDLKGVIQEGWHQTRRTGFGLLLAIVGVTAIWILLSNVLLLPYLGDDSQMNVAMVLSLLMTVVMAPMTSSLDMLGLQQSVGVRARANQVFDFFRHFVRLGMLSLLGSLLTSLFGPLFDLLGLPAVLSFIPSALIGMGLLFTVPLVLERGLTPPQAILVSLKLFARGWPSIVLFHGVMTALFFLALIPMGLGLIWVAPLYFNCKGILYRDLCGVGVEVNEVTEGPNHFNA
>CP032839.1|AYK18231.1|2254395_2255499_+|spermidine/putrescine-ABC-transporter-ATP-binding-protein-PotA
MMNNPQVIVALNKISKKYDGKVILSDLDLDIYDGEFLTLLGPSGCGKTTLLRLLAGLESVDGGTIHLAGDEITHIPAEHRHINTVFQSYALFPHMTVFENVAFGLEMQKVPASEIRQRVEETLAMVQLTELANRRPDQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQSELKALQRRLGITFVFVTHDQEEALTMSDRILVMEGGKIIQRGTPRDIYESPANLFVARFIGEINVMDGKLISQREPGIWQAEVEGRECLLHTTLPFQPDDKVLVLLRPEDLRILDQDDDQSGALRGNIRERNYKGATLDSVIELESGKQLLISEFFDEDDPDFDYRLGQEVAIHWVDSWEVVLPYEPH
>CP032839.1|AYK18232.1|2255485_2256373_+|spermidine/putrescine-ABC-transporter-permease-PotB
MSLTNLRVAHSFAHNGFRNGAIALILGWLTLFVFLPNLMIIGVSFLTRDESELIAPLFTLSNYGRLLDPLYFEVLLHSLWLALLATSICLLVGYPFAWLLAHLPARIRPLLLFLVVVPFWTNSLIRTYALKVLLGTRGLINGWLLDLGLIERPLQMMYTEVAVIIGLVYVLLPFMVLPLYSSIEKLDGRLLEAARDLGANGWQRLVRIILPLTLPGIIAGCLLVFLPAMGMFYVSDLLGGAKHLLIGNLIKTQFLNSRDWPFGAAISVMLTVLMALLVYCYWRAGKLLSKKGELT
>CP032839.1|AYK18233.1|2256369_2257140_+|spermidine/putrescine-ABC-transporter-permease-PotC
MMRALKALFLLLVFGYLYVPIGVLIANSFNLSKYGIDWRGFTLGWYEKLFASASLMQAAQHSLTIAALTATAATLIGTLTAVALFRYRFRGKQYVSGMLFVVMMSPDIVMAISLLTLFVVTGIALGFWSLLIAHITFCLPFVVITVYSRLCGFDVRMLEAARDLGAGEWIILRRIILPLALPAVMAGWLLSFTLSLDDVVVSSFVTGPAYEILPLKIYSMVKVGVSPEVNALATLMLVASIGMVLLAQLLLRKRQG

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Crispr_ID: CP032839_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032839_8

3095502-3098976

TypeI

I-C:NA

Consensus_repeat	Method
GTTTCAATCCACGCGCCCGCAGGCGCGAC	CRISPRCasFinder
GTTTCAATCCACGCGCCCG	CRT
GTTTCAATCCACGCGCCC	PILER-CR
GTTTCAATCCACGCGCCCACGGGGGGCGCGA	PILER-CR
GTTTCAATCCACGCGCCCGCAGG	PILER-CR
GTTTCAATCCACGCGCCCGCAGGGGGCGCGAC	PILER-CR

53 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3,WYL

The CRISPR arrays of CP032839_8

>merge|CP032839|8|3095502-3098976|CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR,PILER-CR
TTATTAATCCACGCGCCCGCAGGAGGCGCGACCTCGTTCTGCACCGCGTCAGTGATGTGCATGATGTTTCAATCCACGCGCCCGCGGAGGGCGCGACCTGGCATGCCTGTCTGCCGACTACCATGACAGCATGTTTCAATCCACGCGCCTGCGGGGGGCGCGACACATCCCCGCGCCTCTTCGTCGAGTTTCAATCCACGCGCCCGCGGGAGGCGCGACCTGTGCTGCCAAGGTATAGGCGCGGGTCATGTTGTTTCAATCCACGCGCCCACAGGGCGCGCGACCTGTGCAAAGCGTGGGGATTCCGCCTGGTCAACATGTTTCAATCCACGCGCCCGCGGAGGGCGTGACCTCGTACTGGTTCCCCTTGAGGACTCCCATTTCAGTTTCAATCCACGCGCCCGCGGAGGGCGCGACTCCGCAAGGTGGCCTCCGGTATGGCGATGCACAAGTTTCAATCCACGCGCCCATGGGGGGCGCGACTATTGCCGAGCGATACGGTCACCCAATTTATTCAGTTTCAATCGACGCGCCCGTGGGGGCGCGACCAGAGTGAAATTAAACGCTTTGACGATGAAGGCATTTCAATCCACGCGCCCGCAGGGGGCGCGACTGGCACATACTTGATGCCATCGATCATCACTTCGTGTTTCAATCCACGCGCCCGTGGGGGGCGCGACATTTGGAGACTTACGAGGTGGCGCCGGGTTACTGGTTTCAATCCACGCGCCCGCGGGGGGCGCGACGGAAGGACTTCGGCAGAACCAGATCGTTACCCTCGTTTCAATACACCCGCCCGCGGAGGGCACGACGTCAAGCCGTCCATCACCATCACCTACAACTGGTTTCAATCCACGAGCCCGCGAGGGGCACGACACCCGACATCCTGTTCAATGGTCAGCTAATCGAAGTTTCAATCCACGCGCCCACAGGGGGCGCGACCGGTGCCACCCTTGCGGCGGCACATGTACTGCTTGTTTCAATCCACGCGCCCGTGGGGGCACGACAACTCATCTGTGAAAACCTCAACCTTACCGCAGAGTTTCAATCCACGCGCCCACGGGGGGCGCGATCTGGTGATCATACCAACAGGGCCGCCCTGGTGTTCACGGTTTCAATCCACGCGCCAGTGGGGGGCGCGACGGCTGGCCTTGAGGCTGTCCACCTCGTTCACATCGTTTCAATCCACACGCCCGTGGGGGGCGCGACATGCGCGAGGAGGTCTATCTGCGGGCCGCTATCACGTTTCAATCCACGCGCCCGCAGAGGGCGCGACTGTAGCCCAACGCCTTGCACACATCGACAGCGCAGTTTCAATCCACGCCCCCGCAGGGGGCGCGACACAATTGCAACTCTTGCTGAATGAGCCTCTGATGGTTTCAATCCACGCGCCCGCAGGGGGCGCGACCACTGCCGTTTCGTGAATTCAAGACGGAGAGAGGTTTCAATCCACGCGCCCGCAGGGGGCGCGACGCGTGGTCTCTGTCGCCCAGAACTTGCCGGTCTTGTTTCAATCCACGCGCCCGCAGGGGGCGCGACCTGGCCATGCTCAGGCGCTGTCAGGCAGATAGAAGTTTCAATCCACGCGCCCGCAGGCGCGACCAAGGCTGTCGATATCGTCATCGTCATGGGGCAGGTTTCAATCCACGCGCCCGCAGGCGCGACATTCGCAGAGGAAGAGGTGGGGGCTGGCAGGATGTTTCAATCCACGCGCCCGCAGGCGCGACTCAGCTCAGAAAGCGGCTTTTGCGCAGATAGTCGTTTCAATCCACGCGCCCGCAGGCGCGACATGATAACACCGTTAACCATAAGGGGCATAAATGGTTTCAATCCACGCGCCCGCAGGCGCGACCATAATCACAGCGGCAGGGCTCAGGCTATCCATGTTTCAATCCACGCGCCCGCAGGCGCGACGACGGCACCCTGACGCAATTCGTCAGTGGGGTATGTTTCAATCCACGCGCCCGCAGGCGCGACTGGTGGCCATCGAGCGCGAAGTCTCGATGTATCAGTTTCAATCCACGCGCCCGCAGGCGCGACGAGCGGAGCACCGGCTTGGTGCCGTTGGTCACGATGTTTCAATCCACGCGCCCGCAGGCGCGACTACAGGTATCGGAGCTGGCGGCACCGCCTTTAGTGGTTTCAATCCACGCGCCCGCAGGCGCGACCCGTGGCAACTTCAGCATGCGCGATCGGGCATCAGTTTCAATCCACGCGCCCGCAGGCGCGACCGCTATCGGTTCCCGGGCTGCACTGACCAAAGAGTTTCAATCCACGCGCCCGCAGGCGCGACTGCGCGATATCGCGATCGGCCTGAGCCTGAGCCTGTTTCAATCCACGCGCCCGCAGGCGCGACGATAGTCTGGCGCTGTTACGGCGGGATAGCGATAGTTTCAATCCACGCGCCCGCAGGGCGCGACATTTGGTGGGCACCGAGCTTTGCCTCGTGCGCTGTTTCAATCCACGCGCCCGCAGGCGCGACCATTATCTACATTCACCACCAGCCTACCGTGGCTGTTTCAATCCACGCGCCCGCAGGCGCGACGCGCCAGTTGATAATGCTCTCTGCGCTGTACGCCAGTTTCAATCCACGCGCCCGCAGGGGGCGCGACCATATAAATCTGGCGGAGACTTCGCAAGAGATGGGTTTCAATCCACGCGCCCGCAGGGGGCGCGACGCGGTGCCTATCACACAAAAAGATTCCAGCTGGCTGTTTCAATCCACGCGCCCGCAGGGGGCGCGACTCGCTGATTTTGCTAACTGGTTGGATAAACAGTAGTTTCAATCCACGCGCCCGCAGGGGGCGCGACAAGGATGGGCCTGTGCGGGTGAAGTTGTCCGGACAGTTTCAATCCACGCGCCCGCAGGGGGCGCGACTGCAAGGGAGCTTACCGGAGCCGACCGGCTGGTTTGTTTCAATCCACGCGCCCGCAGGGGGCGCGACCACACCTTTAGGCACTCAGCGGATGCTTTATCTAGGTTTCAATCCACGCGCCCGCAGGGGGCGCGACACAACGGGGCAAGCACCACTGATTACGTCTACATGTTTCAATCCACGCGCCCGCAGGGGGCGCGACATAGTCTCGCCCTTGATGCTGCCGCTGCCAAAATCGTTTCAATCCACGCGCCCGCAGGGGGCGCGACCAACGCTGATGGTGTACTCGCTCATGTTGGTCTTGTTTCAATCCACGCGCCCCGCAGGGGGCGCGACGGCTGGGCTGGGATGTCGGTATGTCAGTGTTCAAGTTTCAATCCACGCGCCCGCAGGGGGCGCGACCAATGCCGAAACTCCAACTGAGGGCAGTAGCATGTTTCAATCCACGCGCCCGCAGGGGGCGCGACCAAGTGCTGTCGATGTTTGGCCGCTAATCGGTGAGTTTCAATCCACGCGCCCGCAGGGGGCGCGACCGGCTCCGTGTGTAGCGGTGGCCTTTATCTGGTGGTTTCAATCCACGCGCCCGCAGGGGGCGCGAC

>CP032839|8|8|3095502-3098973|CRISPRCasFinder
TTATTAATCCACGCGCCCGCAGGAGGCGC	GACCTCGTTCTGCACCGCGTCAGTGATGTGCATGAT
GTTTCAATCCACGCGCCCGCGGAGGGCGC	GACCTGGCATGCCTGTCTGCCGACTACCATGACAGCAT
GTTTCAATCCACGCGCCTGCGGGGGGCGC	GACACATCCCCGCGCCTCTTCGTCGA
GTTTCAATCCACGCGCCCGCGGGAGGCGC	GACCTGTGCTGCCAAGGTATAGGCGCGGGTCATGTT
GTTTCAATCCACGCGCCCACAGGGCGCGC	GACCTGTGCAAAGCGTGGGGATTCCGCCTGGTCAACAT
GTTTCAATCCACGCGCCCGCGGAGGGCGT	GACCTCGTACTGGTTCCCCTTGAGGACTCCCATTTCA
GTTTCAATCCACGCGCCCGCGGAGGGCGC	GACTCCGCAAGGTGGCCTCCGGTATGGCGATGCACAA
GTTTCAATCCACGCGCCCATGGGGGGCGC	GACTATTGCCGAGCGATACGGTCACCCAATTTATTCA
GTTTCAATCGACGCGCCCGTGGGGGCGCG	ACCAGAGTGAAATTAAACGCTTTGACGATGAAGGC
ATTTCAATCCACGCGCCCGCAGGGGGCGC	GACTGGCACATACTTGATGCCATCGATCATCACTTCGT
GTTTCAATCCACGCGCCCGTGGGGGGCGC	GACATTTGGAGACTTACGAGGTGGCGCCGGGTTACTG
GTTTCAATCCACGCGCCCGCGGGGGGCGC	GACGGAAGGACTTCGGCAGAACCAGATCGTTACCCTC
GTTTCAATACACCCGCCCGCGGAGGGCAC	GACGTCAAGCCGTCCATCACCATCACCTACAACTG
GTTTCAATCCACGAGCCCGCGAGGGGCAC	GACACCCGACATCCTGTTCAATGGTCAGCTAATCGAA
GTTTCAATCCACGCGCCCACAGGGGGCGC	GACCGGTGCCACCCTTGCGGCGGCACATGTACTGCTT
GTTTCAATCCACGCGCCCGTGGGGGCACG	ACAACTCATCTGTGAAAACCTCAACCTTACCGCAGA
GTTTCAATCCACGCGCCCACGGGGGGCGC	GATCTGGTGATCATACCAACAGGGCCGCCCTGGTGTTCACG
GTTTCAATCCACGCGCCAGTGGGGGGCGC	GACGGCTGGCCTTGAGGCTGTCCACCTCGTTCACATC
GTTTCAATCCACACGCCCGTGGGGGGCGC	GACATGCGCGAGGAGGTCTATCTGCGGGCCGCTATCAC
GTTTCAATCCACGCGCCCGCAGAGGGCGC	GACTGTAGCCCAACGCCTTGCACACATCGACAGCGCA
GTTTCAATCCACGCCCCCGCAGGGGGCGC	GACACAATTGCAACTCTTGCTGAATGAGCCTCTGATG
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACCACTGCCGTTTCGTGAATTCAAGACGGAGAGAG
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACGCGTGGTCTCTGTCGCCCAGAACTTGCCGGTCTT
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACCTGGCCATGCTCAGGCGCTGTCAGGCAGATAGAA
GTTTCAATCCACGCGCCCGCAGGCGCGAC	CAAGGCTGTCGATATCGTCATCGTCATGGGGCAG
GTTTCAATCCACGCGCCCGCAGGCGCGAC	ATTCGCAGAGGAAGAGGTGGGGGCTGGCAGGAT
GTTTCAATCCACGCGCCCGCAGGCGCGAC	TCAGCTCAGAAAGCGGCTTTTGCGCAGATAGTC
GTTTCAATCCACGCGCCCGCAGGCGCGAC	ATGATAACACCGTTAACCATAAGGGGCATAAATG
GTTTCAATCCACGCGCCCGCAGGCGCGAC	CATAATCACAGCGGCAGGGCTCAGGCTATCCAT
GTTTCAATCCACGCGCCCGCAGGCGCGAC	GACGGCACCCTGACGCAATTCGTCAGTGGGGTAT
GTTTCAATCCACGCGCCCGCAGGCGCGAC	TGGTGGCCATCGAGCGCGAAGTCTCGATGTATCA
GTTTCAATCCACGCGCCCGCAGGCGCGAC	GAGCGGAGCACCGGCTTGGTGCCGTTGGTCACGAT
GTTTCAATCCACGCGCCCGCAGGCGCGAC	TACAGGTATCGGAGCTGGCGGCACCGCCTTTAGTG
GTTTCAATCCACGCGCCCGCAGGCGCGAC	CCGTGGCAACTTCAGCATGCGCGATCGGGCATCA
GTTTCAATCCACGCGCCCGCAGGCGCGAC	CGCTATCGGTTCCCGGGCTGCACTGACCAAAGA
GTTTCAATCCACGCGCCCGCAGGCGCGAC	TGCGCGATATCGCGATCGGCCTGAGCCTGAGCCT
GTTTCAATCCACGCGCCCGCAGGCGCGAC	GATAGTCTGGCGCTGTTACGGCGGGATAGCGATA
GTTTCAATCCACGCGCCCGCAGGGCGCGA	CATTTGGTGGGCACCGAGCTTTGCCTCGTGCGCT
GTTTCAATCCACGCGCCCGCAGGCGCGAC	CATTATCTACATTCACCACCAGCCTACCGTGGCT
GTTTCAATCCACGCGCCCGCAGGCGCGAC	GCGCCAGTTGATAATGCTCTCTGCGCTGTACGCCA
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACCATATAAATCTGGCGGAGACTTCGCAAGAGATGG
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACGCGGTGCCTATCACACAAAAAGATTCCAGCTGGCT
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACTCGCTGATTTTGCTAACTGGTTGGATAAACAGTA
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACAAGGATGGGCCTGTGCGGGTGAAGTTGTCCGGACA
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACTGCAAGGGAGCTTACCGGAGCCGACCGGCTGGTTT
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACCACACCTTTAGGCACTCAGCGGATGCTTTATCTAG
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACACAACGGGGCAAGCACCACTGATTACGTCTACAT
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACATAGTCTCGCCCTTGATGCTGCCGCTGCCAAAATC
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACCAACGCTGATGGTGTACTCGCTCATGTTGGTCTT
GTTTCAATCCACGCGCCCCGCAGGGGGCG	CGACGGCTGGGCTGGGATGTCGGTATGTCAGTGTTCAA
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACCAATGCCGAAACTCCAACTGAGGGCAGTAGCAT
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACCAAGTGCTGTCGATGTTTGGCCGCTAATCGGTGA
GTTTCAATCCACGCGCCCGCAGGGGGCGC	GACCGGCTCCGTGTGTAGCGGTGGCCTTTATCTGGTG
GTTTCAATCCACGCGCCCGCAGGGGGCGC

>CP032839|8|1|3095502-3098963|CRT
TTATTAATCCACGCGCCCG	CAGGAGGCGCGACCTCGTTCTGCACCGCGTCAGTGATGTGCATGAT
GTTTCAATCCACGCGCCCG	CGGAGGGCGCGACCTGGCATGCCTGTCTGCCGACTACCATGACAGCAT
GTTTCAATCCACGCGCCTG	CGGGGGGCGCGACACATCCCCGCGCCTCTTCGTCGA
GTTTCAATCCACGCGCCCG	CGGGAGGCGCGACCTGTGCTGCCAAGGTATAGGCGCGGGTCATGTT
GTTTCAATCCACGCGCCCA	CAGGGCGCGCGACCTGTGCAAAGCGTGGGGATTCCGCCTGGTCAACAT
GTTTCAATCCACGCGCCCG	CGGAGGGCGTGACCTCGTACTGGTTCCCCTTGAGGACTCCCATTTCA
GTTTCAATCCACGCGCCCG	CGGAGGGCGCGACTCCGCAAGGTGGCCTCCGGTATGGCGATGCACAA
GTTTCAATCCACGCGCCCA	TGGGGGGCGCGACTATTGCCGAGCGATACGGTCACCCAATTTATTCA
GTTTCAATCGACGCGCCCG	TGGGGGCGCGACCAGAGTGAAATTAAACGCTTTGACGATGAAGGC
ATTTCAATCCACGCGCCCG	CAGGGGGCGCGACTGGCACATACTTGATGCCATCGATCATCACTTCGT
GTTTCAATCCACGCGCCCG	TGGGGGGCGCGACATTTGGAGACTTACGAGGTGGCGCCGGGTTACTG
GTTTCAATCCACGCGCCCG	CGGGGGGCGCGACGGAAGGACTTCGGCAGAACCAGATCGTTACCCTC
GTTTCAATACACCCGCCCG	CGGAGGGCACGACGTCAAGCCGTCCATCACCATCACCTACAACTG
GTTTCAATCCACGAGCCCG	CGAGGGGCACGACACCCGACATCCTGTTCAATGGTCAGCTAATCGAA
GTTTCAATCCACGCGCCCA	CAGGGGGCGCGACCGGTGCCACCCTTGCGGCGGCACATGTACTGCTT
GTTTCAATCCACGCGCCCG	TGGGGGCACGACAACTCATCTGTGAAAACCTCAACCTTACCGCAGA
GTTTCAATCCACGCGCCCA	CGGGGGGCGCGATCTGGTGATCATACCAACAGGGCCGCCCTGGTGTTCACG
GTTTCAATCCACGCGCCAG	TGGGGGGCGCGACGGCTGGCCTTGAGGCTGTCCACCTCGTTCACATC
GTTTCAATCCACACGCCCG	TGGGGGGCGCGACATGCGCGAGGAGGTCTATCTGCGGGCCGCTATCAC
GTTTCAATCCACGCGCCCG	CAGAGGGCGCGACTGTAGCCCAACGCCTTGCACACATCGACAGCGCA
GTTTCAATCCACGCCCCCG	CAGGGGGCGCGACACAATTGCAACTCTTGCTGAATGAGCCTCTGATG
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACCACTGCCGTTTCGTGAATTCAAGACGGAGAGAG
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACGCGTGGTCTCTGTCGCCCAGAACTTGCCGGTCTT
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACCTGGCCATGCTCAGGCGCTGTCAGGCAGATAGAA
GTTTCAATCCACGCGCCCG	CAGGCGCGACCAAGGCTGTCGATATCGTCATCGTCATGGGGCAG
GTTTCAATCCACGCGCCCG	CAGGCGCGACATTCGCAGAGGAAGAGGTGGGGGCTGGCAGGAT
GTTTCAATCCACGCGCCCG	CAGGCGCGACTCAGCTCAGAAAGCGGCTTTTGCGCAGATAGTC
GTTTCAATCCACGCGCCCG	CAGGCGCGACATGATAACACCGTTAACCATAAGGGGCATAAATG
GTTTCAATCCACGCGCCCG	CAGGCGCGACCATAATCACAGCGGCAGGGCTCAGGCTATCCAT
GTTTCAATCCACGCGCCCG	CAGGCGCGACGACGGCACCCTGACGCAATTCGTCAGTGGGGTAT
GTTTCAATCCACGCGCCCG	CAGGCGCGACTGGTGGCCATCGAGCGCGAAGTCTCGATGTATCA
GTTTCAATCCACGCGCCCG	CAGGCGCGACGAGCGGAGCACCGGCTTGGTGCCGTTGGTCACGAT
GTTTCAATCCACGCGCCCG	CAGGCGCGACTACAGGTATCGGAGCTGGCGGCACCGCCTTTAGTG
GTTTCAATCCACGCGCCCG	CAGGCGCGACCCGTGGCAACTTCAGCATGCGCGATCGGGCATCA
GTTTCAATCCACGCGCCCG	CAGGCGCGACCGCTATCGGTTCCCGGGCTGCACTGACCAAAGA
GTTTCAATCCACGCGCCCG	CAGGCGCGACTGCGCGATATCGCGATCGGCCTGAGCCTGAGCCT
GTTTCAATCCACGCGCCCG	CAGGCGCGACGATAGTCTGGCGCTGTTACGGCGGGATAGCGATA
GTTTCAATCCACGCGCCCG	CAGGGCGCGACATTTGGTGGGCACCGAGCTTTGCCTCGTGCGCT
GTTTCAATCCACGCGCCCG	CAGGCGCGACCATTATCTACATTCACCACCAGCCTACCGTGGCT
GTTTCAATCCACGCGCCCG	CAGGCGCGACGCGCCAGTTGATAATGCTCTCTGCGCTGTACGCCA
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACCATATAAATCTGGCGGAGACTTCGCAAGAGATGG
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACGCGGTGCCTATCACACAAAAAGATTCCAGCTGGCT
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACTCGCTGATTTTGCTAACTGGTTGGATAAACAGTA
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACAAGGATGGGCCTGTGCGGGTGAAGTTGTCCGGACA
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACTGCAAGGGAGCTTACCGGAGCCGACCGGCTGGTTT
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACCACACCTTTAGGCACTCAGCGGATGCTTTATCTAG
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACACAACGGGGCAAGCACCACTGATTACGTCTACAT
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACATAGTCTCGCCCTTGATGCTGCCGCTGCCAAAATC
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACCAACGCTGATGGTGTACTCGCTCATGTTGGTCTT
GTTTCAATCCACGCGCCCC	GCAGGGGGCGCGACGGCTGGGCTGGGATGTCGGTATGTCAGTGTTCAA
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACCAATGCCGAAACTCCAACTGAGGGCAGTAGCAT
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACCAAGTGCTGTCGATGTTTGGCCGCTAATCGGTGA
GTTTCAATCCACGCGCCCG	CAGGGGGCGCGACCGGCTCCGTGTGTAGCGGTGGCCTTTATCTGGTG
GTTTCAATCCACGCGCCCG

>CP032839|8|1|3095689-3096167|PILER-CR
GTTTCAATCCACGCGCCC	GCGGGAGGCGCGACCTGTGCTGCCAAGGTATAGGCGCGGGTCATGTT
GTTTCAATCCACGCGCCC	ACAGGGCGCGCGACCTGTGCAAAGCGTGGGGATTCCGCCTGGTCAACAT
GTTTCAATCCACGCGCCC	GCGGAGGGCGTGACCTCGTACTGGTTCCCCTTGAGGACTCCCATTTCA
GTTTCAATCCACGCGCCC	GCGGAGGGCGCGACTCCGCAAGGTGGCCTCCGGTATGGCGATGCACAA
GTTTCAATCCACGCGCCC	ATGGGGGGCGCGACTATTGCCGAGCGATACGGTCACCCAATTTATTCA
GTTTCAATCGACGCGCCC	GTGGGGGCGCGACCAGAGTGAAATTAAACGCTTTGACGATGAAGGC
ATTTCAATCCACGCGCCC	GCAGGGGGCGCGACTGGCACATACTTGATGCCATCGATCATCACTTCGT
GTTTCAATCCACGCGCCCGTGGGGGGCGCGACATTTGGAGACTTACGAGGTGGCGCCGGGTTACTGGTTTCAATCCACGCGCCCGCGGGGGGCGCGACGGAAGGACTTCGGCAGAACCAGATCGTTACCCTCGTTTCAATACACCCGCCCGCGGAGGGCACGACGTCAAGCCGTCCATCACCATCACCTACAACTGGTTTCAATCCACGAGCCCGCGAGGGGCACGA	CACCCGACATCCTGTTCAATGGTCAGCTAATCGAA
GTTTCAATCCACGCGCCCACAGGGGGCGCGA	CCGGTGCCACCCTTGCGGCGGCACATGTACTGCTT
GTTTCAATCCACGCGCCCGTGGGGGCACGAC	AACTCATCTGTGAAAACCTCAACCTTACCGCAGAGTTTCA
ATCCACGCGCCCACGGGGGGCGCGATCTGGTGATCATACCAACAGGGCCGCCCTGGTGTTCACGGTTTCAATCCACGCGCCAGTGGGGGGCGCGACGGCTGGCCTTGAGGCTGTCCACCTCGTTCACATCGTTTCAATCCACACGCCCGTGGGGGGCGCGACATGCGCGAGGAGGTCTATCTGCGGGCCGCTATCACGTTTCAATCCACGCGCCCGCAGAGGGCGCGACTGTAGCCCAACGCCTTGCACACATCGACAGCGCAGTTTCAATCCACGCCCCCGCAGG	GGGCGCGACACAATTGCAACTCTTGCTGAATGAGCCTCTGATG
GTTTCAATCCACGCGCCCGCAGG	GGGCGCGACCACTGCCGTTTCGTGAATTCAAGACGGAGAGAG
GTTTCAATCCACGCGCCCGCAGG	GGGCGCGACGCGTGGTCTCTGTCGCCCAGAACTTGCCGGTCTT
GTTTCAATCCACGCGCCCGCAGG	GGGCGCGACCTGGCCATGCTCAGGCGCTGTCAGGCAGATAGAA
GTTTCAATCCACGCGCCCGCAGG	CGCGACCAAGGCTGTCGATATCGTCATCGTCATGGGGCAG
GTTTCAATCCACGCGCCCGCAGG	CGCGACATTCGCAGAGGAAGAGGTGGGGGCTGGCAGGAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACTCAGCTCAGAAAGCGGCTTTTGCGCAGATAGTC
GTTTCAATCCACGCGCCCGCAGG	CGCGACATGATAACACCGTTAACCATAAGGGGCATAAATG
GTTTCAATCCACGCGCCCGCAGG	CGCGACCATAATCACAGCGGCAGGGCTCAGGCTATCCAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACGACGGCACCCTGACGCAATTCGTCAGTGGGGTAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACTGGTGGCCATCGAGCGCGAAGTCTCGATGTATCA
GTTTCAATCCACGCGCCCGCAGG	CGCGACGAGCGGAGCACCGGCTTGGTGCCGTTGGTCACGAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACTACAGGTATCGGAGCTGGCGGCACCGCCTTTAGTG
GTTTCAATCCACGCGCCCGCAGG	CGCGACCCGTGGCAACTTCAGCATGCGCGATCGGGCATCA
GTTTCAATCCACGCGCCCGCAGG	CGCGACCGCTATCGGTTCCCGGGCTGCACTGACCAAAGA
GTTTCAATCCACGCGCCCGCAGG	CGCGACTGCGCGATATCGCGATCGGCCTGAGCCTGAGCCT
GTTTCAATCCACGCGCCCGCAGG	CGCGACGATAGTCTGGCGCTGTTACGGCGGGATAGCGATA
GTTTCAATCCACGCGCCCGCAGG	GCGCGACATTTGGTGGGCACCGAGCTTTGCCTCGTGCGCT
GTTTCAATCCACGCGCCCGCAGG	CGCGACCATTATCTACATTCACCACCAGCCTACCGTGGCT
GTTTCAATCCACGCGCCCGCAGGCGCGACGCGCCAGTTGATAATGCTCTCTGCGCTGTACGCCAGTTTCAATCCACGCGCCCGCAGGGGGCGCGACCATATAAATCTGGCGGAGACTTCGCAAGAGATGGGTTTCAATCCACGCGCCCGCAGGGGGCGCGACG	CGGTGCCTATCACACAAAAAGATTCCAGCTGGCTG
TTTCAATCCACGCGCCCGCAGGGGGCGCGACTC	GCTGATTTTGCTAACTGGTTGGATAAACAGTAGT
TTCAATCCACGCGCCCGCAGGGGGCGCGACAAG	GATGGGCCTGTGCGGGTGAAGTTGTCCGGACAGTT
TCAATCCACGCGCCCGCAGGGGGCGCGACTGCA	AGGGAGCTTACCGGAGCCGACCGGCTGGTTTGTTT
CAATCCACGCGCCCGCAGGGGGCGCGACCACAC	CTTTAGGCACTCAGCGGATGCTTTATCTAGGTTTC
AATCCACGCGCCCGCAGGGGGCGCGACACAACG	GGGCAAGCACCACTGATTACGTCTACATGTTTCA
ATCCACGCGCCCGCAGGGGGCGCGACATAGTCT	CGCCCTTGATGCTGCCGCTGCCAAAATCGTTTCAA
TCCACGCGCCCGCAGGGGGCGCGACCAACGCTG	ATGGTGTACTCGCTCATGTTGGTCTTGTTTCAAT
CCACGCGCCCCGCAGGGGGCGCGACGGCTGGGC	TGGGATGTCGGTATGTCAGTGTTCAAGTTTCAAT
CCACGCGCCCGCAGGGGGCGCGACCAATGCCGA	AACTCCAACTGAGGGCAGTAGCATGTTTCAATC
CACGCGCCCGCAGGGGGCGCGACCAAGTGCTGT	CGATGTTTGGCCGCTAATCGGTGAGTTTCAATCC
ACGCGCCCGCAGGGGGCGCGACCGGCTCCGTGT	GTAGCGGTGGCCTTTATCTGGTGGTTTCAATCCA


>CP032839|8|2|3096346-3096573|PILER-CR
	GCGGGAGGCGCGACCTGTGCTGCCAAGGTATAGGCGCGGGTCATGTT
GTTTCAATCCACGCGCCC	ACAGGGCGCGCGACCTGTGCAAAGCGTGGGGATTCCGCCTGGTCAACAT
GTTTCAATCCACGCGCCC	GCGGAGGGCGTGACCTCGTACTGGTTCCCCTTGAGGACTCCCATTTCA
GTTTCAATCCACGCGCCC	GCGGAGGGCGCGACTCCGCAAGGTGGCCTCCGGTATGGCGATGCACAA
GTTTCAATCCACGCGCCC	ATGGGGGGCGCGACTATTGCCGAGCGATACGGTCACCCAATTTATTCA
GTTTCAATCGACGCGCCC	GTGGGGGCGCGACCAGAGTGAAATTAAACGCTTTGACGATGAAGGC
ATTTCAATCCACGCGCCC	GCAGGGGGCGCGACTGGCACATACTTGATGCCATCGATCATCACTTCGT
GTTTCAATCCACGCGCCCGTGGGGGGCGCGACATTTGGAGACTTACGAGGTGGCGCCGGGTTACTGGTTTCAATCCACGCGCCCGCGGGGGGCGCGACGGAAGGACTTCGGCAGAACCAGATCGTTACCCTCGTTTCAATACACCCGCCCGCGGAGGGCACGACGTCAAGCCGTCCATCACCATCACCTACAACTGGTTTCAATCCACGAGCCCGCGAGGGGCACGA	CACCCGACATCCTGTTCAATGGTCAGCTAATCGAA
GTTTCAATCCACGCGCCCACAGGGGGCGCGA	CCGGTGCCACCCTTGCGGCGGCACATGTACTGCTT
GTTTCAATCCACGCGCCCGTGGGGGCACGAC	AACTCATCTGTGAAAACCTCAACCTTACCGCAGAGTTTCA
ATCCACGCGCCCACGGGGGGCGCGATCTGGTGATCATACCAACAGGGCCGCCCTGGTGTTCACGGTTTCAATCCACGCGCCAGTGGGGGGCGCGACGGCTGGCCTTGAGGCTGTCCACCTCGTTCACATCGTTTCAATCCACACGCCCGTGGGGGGCGCGACATGCGCGAGGAGGTCTATCTGCGGGCCGCTATCACGTTTCAATCCACGCGCCCGCAGAGGGCGCGACTGTAGCCCAACGCCTTGCACACATCGACAGCGCAGTTTCAATCCACGCCCCCGCAGG	GGGCGCGACACAATTGCAACTCTTGCTGAATGAGCCTCTGATG
GTTTCAATCCACGCGCCCGCAGG	GGGCGCGACCACTGCCGTTTCGTGAATTCAAGACGGAGAGAG
GTTTCAATCCACGCGCCCGCAGG	GGGCGCGACGCGTGGTCTCTGTCGCCCAGAACTTGCCGGTCTT
GTTTCAATCCACGCGCCCGCAGG	GGGCGCGACCTGGCCATGCTCAGGCGCTGTCAGGCAGATAGAA
GTTTCAATCCACGCGCCCGCAGG	CGCGACCAAGGCTGTCGATATCGTCATCGTCATGGGGCAG
GTTTCAATCCACGCGCCCGCAGG	CGCGACATTCGCAGAGGAAGAGGTGGGGGCTGGCAGGAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACTCAGCTCAGAAAGCGGCTTTTGCGCAGATAGTC
GTTTCAATCCACGCGCCCGCAGG	CGCGACATGATAACACCGTTAACCATAAGGGGCATAAATG
GTTTCAATCCACGCGCCCGCAGG	CGCGACCATAATCACAGCGGCAGGGCTCAGGCTATCCAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACGACGGCACCCTGACGCAATTCGTCAGTGGGGTAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACTGGTGGCCATCGAGCGCGAAGTCTCGATGTATCA
GTTTCAATCCACGCGCCCGCAGG	CGCGACGAGCGGAGCACCGGCTTGGTGCCGTTGGTCACGAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACTACAGGTATCGGAGCTGGCGGCACCGCCTTTAGTG
GTTTCAATCCACGCGCCCGCAGG	CGCGACCCGTGGCAACTTCAGCATGCGCGATCGGGCATCA
GTTTCAATCCACGCGCCCGCAGG	CGCGACCGCTATCGGTTCCCGGGCTGCACTGACCAAAGA
GTTTCAATCCACGCGCCCGCAGG	CGCGACTGCGCGATATCGCGATCGGCCTGAGCCTGAGCCT
GTTTCAATCCACGCGCCCGCAGG	CGCGACGATAGTCTGGCGCTGTTACGGCGGGATAGCGATA
GTTTCAATCCACGCGCCCGCAGG	GCGCGACATTTGGTGGGCACCGAGCTTTGCCTCGTGCGCT
GTTTCAATCCACGCGCCCGCAGG	CGCGACCATTATCTACATTCACCACCAGCCTACCGTGGCT
GTTTCAATCCACGCGCCCGCAGGCGCGACGCGCCAGTTGATAATGCTCTCTGCGCTGTACGCCAGTTTCAATCCACGCGCCCGCAGGGGGCGCGACCATATAAATCTGGCGGAGACTTCGCAAGAGATGGGTTTCAATCCACGCGCCCGCAGGGGGCGCGACG	CGGTGCCTATCACACAAAAAGATTCCAGCTGGCTG
TTTCAATCCACGCGCCCGCAGGGGGCGCGACTC	GCTGATTTTGCTAACTGGTTGGATAAACAGTAGT
TTCAATCCACGCGCCCGCAGGGGGCGCGACAAG	GATGGGCCTGTGCGGGTGAAGTTGTCCGGACAGTT
TCAATCCACGCGCCCGCAGGGGGCGCGACTGCA	AGGGAGCTTACCGGAGCCGACCGGCTGGTTTGTTT
CAATCCACGCGCCCGCAGGGGGCGCGACCACAC	CTTTAGGCACTCAGCGGATGCTTTATCTAGGTTTC
AATCCACGCGCCCGCAGGGGGCGCGACACAACG	GGGCAAGCACCACTGATTACGTCTACATGTTTCA
ATCCACGCGCCCGCAGGGGGCGCGACATAGTCT	CGCCCTTGATGCTGCCGCTGCCAAAATCGTTTCAA
TCCACGCGCCCGCAGGGGGCGCGACCAACGCTG	ATGGTGTACTCGCTCATGTTGGTCTTGTTTCAAT
CCACGCGCCCCGCAGGGGGCGCGACGGCTGGGC	TGGGATGTCGGTATGTCAGTGTTCAAGTTTCAAT
CCACGCGCCCGCAGGGGGCGCGACCAATGCCGA	AACTCCAACTGAGGGCAGTAGCATGTTTCAATC
CACGCGCCCGCAGGGGGCGCGACCAAGTGCTGT	CGATGTTTGGCCGCTAATCGGTGAGTTTCAATCC
ACGCGCCCGCAGGGGGCGCGACCGGCTCCGTGT	GTAGCGGTGGCCTTTATCTGGTGGTTTCAATCCA


>CP032839|8|3|3096812-3098040|PILER-CR
	GCGGGAGGCGCGACCTGTGCTGCCAAGGTATAGGCGCGGGTCATGTT
GTTTCAATCCACGCGCCC	ACAGGGCGCGCGACCTGTGCAAAGCGTGGGGATTCCGCCTGGTCAACAT
GTTTCAATCCACGCGCCC	GCGGAGGGCGTGACCTCGTACTGGTTCCCCTTGAGGACTCCCATTTCA
GTTTCAATCCACGCGCCC	GCGGAGGGCGCGACTCCGCAAGGTGGCCTCCGGTATGGCGATGCACAA
GTTTCAATCCACGCGCCC	ATGGGGGGCGCGACTATTGCCGAGCGATACGGTCACCCAATTTATTCA
GTTTCAATCGACGCGCCC	GTGGGGGCGCGACCAGAGTGAAATTAAACGCTTTGACGATGAAGGC
ATTTCAATCCACGCGCCC	GCAGGGGGCGCGACTGGCACATACTTGATGCCATCGATCATCACTTCGT
GTTTCAATCCACGCGCCCGTGGGGGGCGCGACATTTGGAGACTTACGAGGTGGCGCCGGGTTACTGGTTTCAATCCACGCGCCCGCGGGGGGCGCGACGGAAGGACTTCGGCAGAACCAGATCGTTACCCTCGTTTCAATACACCCGCCCGCGGAGGGCACGACGTCAAGCCGTCCATCACCATCACCTACAACTGGTTTCAATCCACGAGCCCGCGAGGGGCACGA	CACCCGACATCCTGTTCAATGGTCAGCTAATCGAA
GTTTCAATCCACGCGCCCACAGGGGGCGCGA	CCGGTGCCACCCTTGCGGCGGCACATGTACTGCTT
GTTTCAATCCACGCGCCCGTGGGGGCACGAC	AACTCATCTGTGAAAACCTCAACCTTACCGCAGAGTTTCA
ATCCACGCGCCCACGGGGGGCGCGATCTGGTGATCATACCAACAGGGCCGCCCTGGTGTTCACGGTTTCAATCCACGCGCCAGTGGGGGGCGCGACGGCTGGCCTTGAGGCTGTCCACCTCGTTCACATCGTTTCAATCCACACGCCCGTGGGGGGCGCGACATGCGCGAGGAGGTCTATCTGCGGGCCGCTATCACGTTTCAATCCACGCGCCCGCAGAGGGCGCGACTGTAGCCCAACGCCTTGCACACATCGACAGCGCAGTTTCAATCCACGCCCCCGCAGG	GGGCGCGACACAATTGCAACTCTTGCTGAATGAGCCTCTGATG
GTTTCAATCCACGCGCCCGCAGG	GGGCGCGACCACTGCCGTTTCGTGAATTCAAGACGGAGAGAG
GTTTCAATCCACGCGCCCGCAGG	GGGCGCGACGCGTGGTCTCTGTCGCCCAGAACTTGCCGGTCTT
GTTTCAATCCACGCGCCCGCAGG	GGGCGCGACCTGGCCATGCTCAGGCGCTGTCAGGCAGATAGAA
GTTTCAATCCACGCGCCCGCAGG	CGCGACCAAGGCTGTCGATATCGTCATCGTCATGGGGCAG
GTTTCAATCCACGCGCCCGCAGG	CGCGACATTCGCAGAGGAAGAGGTGGGGGCTGGCAGGAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACTCAGCTCAGAAAGCGGCTTTTGCGCAGATAGTC
GTTTCAATCCACGCGCCCGCAGG	CGCGACATGATAACACCGTTAACCATAAGGGGCATAAATG
GTTTCAATCCACGCGCCCGCAGG	CGCGACCATAATCACAGCGGCAGGGCTCAGGCTATCCAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACGACGGCACCCTGACGCAATTCGTCAGTGGGGTAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACTGGTGGCCATCGAGCGCGAAGTCTCGATGTATCA
GTTTCAATCCACGCGCCCGCAGG	CGCGACGAGCGGAGCACCGGCTTGGTGCCGTTGGTCACGAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACTACAGGTATCGGAGCTGGCGGCACCGCCTTTAGTG
GTTTCAATCCACGCGCCCGCAGG	CGCGACCCGTGGCAACTTCAGCATGCGCGATCGGGCATCA
GTTTCAATCCACGCGCCCGCAGG	CGCGACCGCTATCGGTTCCCGGGCTGCACTGACCAAAGA
GTTTCAATCCACGCGCCCGCAGG	CGCGACTGCGCGATATCGCGATCGGCCTGAGCCTGAGCCT
GTTTCAATCCACGCGCCCGCAGG	CGCGACGATAGTCTGGCGCTGTTACGGCGGGATAGCGATA
GTTTCAATCCACGCGCCCGCAGG	GCGCGACATTTGGTGGGCACCGAGCTTTGCCTCGTGCGCT
GTTTCAATCCACGCGCCCGCAGG	CGCGACCATTATCTACATTCACCACCAGCCTACCGTGGCT
GTTTCAATCCACGCGCCCGCAGGCGCGACGCGCCAGTTGATAATGCTCTCTGCGCTGTACGCCAGTTTCAATCCACGCGCCCGCAGGGGGCGCGACCATATAAATCTGGCGGAGACTTCGCAAGAGATGGGTTTCAATCCACGCGCCCGCAGGGGGCGCGACG	CGGTGCCTATCACACAAAAAGATTCCAGCTGGCTG
TTTCAATCCACGCGCCCGCAGGGGGCGCGACTC	GCTGATTTTGCTAACTGGTTGGATAAACAGTAGT
TTCAATCCACGCGCCCGCAGGGGGCGCGACAAG	GATGGGCCTGTGCGGGTGAAGTTGTCCGGACAGTT
TCAATCCACGCGCCCGCAGGGGGCGCGACTGCA	AGGGAGCTTACCGGAGCCGACCGGCTGGTTTGTTT
CAATCCACGCGCCCGCAGGGGGCGCGACCACAC	CTTTAGGCACTCAGCGGATGCTTTATCTAGGTTTC
AATCCACGCGCCCGCAGGGGGCGCGACACAACG	GGGCAAGCACCACTGATTACGTCTACATGTTTCA
ATCCACGCGCCCGCAGGGGGCGCGACATAGTCT	CGCCCTTGATGCTGCCGCTGCCAAAATCGTTTCAA
TCCACGCGCCCGCAGGGGGCGCGACCAACGCTG	ATGGTGTACTCGCTCATGTTGGTCTTGTTTCAAT
CCACGCGCCCCGCAGGGGGCGCGACGGCTGGGC	TGGGATGTCGGTATGTCAGTGTTCAAGTTTCAAT
CCACGCGCCCGCAGGGGGCGCGACCAATGCCGA	AACTCCAACTGAGGGCAGTAGCATGTTTCAATC
CACGCGCCCGCAGGGGGCGCGACCAAGTGCTGT	CGATGTTTGGCCGCTAATCGGTGAGTTTCAATCC
ACGCGCCCGCAGGGGGCGCGACCGGCTCCGTGT	GTAGCGGTGGCCTTTATCTGGTGGTTTCAATCCA


>CP032839|8|4|3098148-3098976|PILER-CR
	GCGGGAGGCGCGACCTGTGCTGCCAAGGTATAGGCGCGGGTCATGTT
GTTTCAATCCACGCGCCC	ACAGGGCGCGCGACCTGTGCAAAGCGTGGGGATTCCGCCTGGTCAACAT
GTTTCAATCCACGCGCCC	GCGGAGGGCGTGACCTCGTACTGGTTCCCCTTGAGGACTCCCATTTCA
GTTTCAATCCACGCGCCC	GCGGAGGGCGCGACTCCGCAAGGTGGCCTCCGGTATGGCGATGCACAA
GTTTCAATCCACGCGCCC	ATGGGGGGCGCGACTATTGCCGAGCGATACGGTCACCCAATTTATTCA
GTTTCAATCGACGCGCCC	GTGGGGGCGCGACCAGAGTGAAATTAAACGCTTTGACGATGAAGGC
ATTTCAATCCACGCGCCC	GCAGGGGGCGCGACTGGCACATACTTGATGCCATCGATCATCACTTCGT
GTTTCAATCCACGCGCCCGTGGGGGGCGCGACATTTGGAGACTTACGAGGTGGCGCCGGGTTACTGGTTTCAATCCACGCGCCCGCGGGGGGCGCGACGGAAGGACTTCGGCAGAACCAGATCGTTACCCTCGTTTCAATACACCCGCCCGCGGAGGGCACGACGTCAAGCCGTCCATCACCATCACCTACAACTGGTTTCAATCCACGAGCCCGCGAGGGGCACGA	CACCCGACATCCTGTTCAATGGTCAGCTAATCGAA
GTTTCAATCCACGCGCCCACAGGGGGCGCGA	CCGGTGCCACCCTTGCGGCGGCACATGTACTGCTT
GTTTCAATCCACGCGCCCGTGGGGGCACGAC	AACTCATCTGTGAAAACCTCAACCTTACCGCAGAGTTTCA
ATCCACGCGCCCACGGGGGGCGCGATCTGGTGATCATACCAACAGGGCCGCCCTGGTGTTCACGGTTTCAATCCACGCGCCAGTGGGGGGCGCGACGGCTGGCCTTGAGGCTGTCCACCTCGTTCACATCGTTTCAATCCACACGCCCGTGGGGGGCGCGACATGCGCGAGGAGGTCTATCTGCGGGCCGCTATCACGTTTCAATCCACGCGCCCGCAGAGGGCGCGACTGTAGCCCAACGCCTTGCACACATCGACAGCGCAGTTTCAATCCACGCCCCCGCAGG	GGGCGCGACACAATTGCAACTCTTGCTGAATGAGCCTCTGATG
GTTTCAATCCACGCGCCCGCAGG	GGGCGCGACCACTGCCGTTTCGTGAATTCAAGACGGAGAGAG
GTTTCAATCCACGCGCCCGCAGG	GGGCGCGACGCGTGGTCTCTGTCGCCCAGAACTTGCCGGTCTT
GTTTCAATCCACGCGCCCGCAGG	GGGCGCGACCTGGCCATGCTCAGGCGCTGTCAGGCAGATAGAA
GTTTCAATCCACGCGCCCGCAGG	CGCGACCAAGGCTGTCGATATCGTCATCGTCATGGGGCAG
GTTTCAATCCACGCGCCCGCAGG	CGCGACATTCGCAGAGGAAGAGGTGGGGGCTGGCAGGAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACTCAGCTCAGAAAGCGGCTTTTGCGCAGATAGTC
GTTTCAATCCACGCGCCCGCAGG	CGCGACATGATAACACCGTTAACCATAAGGGGCATAAATG
GTTTCAATCCACGCGCCCGCAGG	CGCGACCATAATCACAGCGGCAGGGCTCAGGCTATCCAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACGACGGCACCCTGACGCAATTCGTCAGTGGGGTAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACTGGTGGCCATCGAGCGCGAAGTCTCGATGTATCA
GTTTCAATCCACGCGCCCGCAGG	CGCGACGAGCGGAGCACCGGCTTGGTGCCGTTGGTCACGAT
GTTTCAATCCACGCGCCCGCAGG	CGCGACTACAGGTATCGGAGCTGGCGGCACCGCCTTTAGTG
GTTTCAATCCACGCGCCCGCAGG	CGCGACCCGTGGCAACTTCAGCATGCGCGATCGGGCATCA
GTTTCAATCCACGCGCCCGCAGG	CGCGACCGCTATCGGTTCCCGGGCTGCACTGACCAAAGA
GTTTCAATCCACGCGCCCGCAGG	CGCGACTGCGCGATATCGCGATCGGCCTGAGCCTGAGCCT
GTTTCAATCCACGCGCCCGCAGG	CGCGACGATAGTCTGGCGCTGTTACGGCGGGATAGCGATA
GTTTCAATCCACGCGCCCGCAGG	GCGCGACATTTGGTGGGCACCGAGCTTTGCCTCGTGCGCT
GTTTCAATCCACGCGCCCGCAGG	CGCGACCATTATCTACATTCACCACCAGCCTACCGTGGCT
GTTTCAATCCACGCGCCCGCAGGCGCGACGCGCCAGTTGATAATGCTCTCTGCGCTGTACGCCAGTTTCAATCCACGCGCCCGCAGGGGGCGCGACCATATAAATCTGGCGGAGACTTCGCAAGAGATGGGTTTCAATCCACGCGCCCGCAGGGGGCGCGACG	CGGTGCCTATCACACAAAAAGATTCCAGCTGGCTG
TTTCAATCCACGCGCCCGCAGGGGGCGCGACTC	GCTGATTTTGCTAACTGGTTGGATAAACAGTAGT
TTCAATCCACGCGCCCGCAGGGGGCGCGACAAG	GATGGGCCTGTGCGGGTGAAGTTGTCCGGACAGTT
TCAATCCACGCGCCCGCAGGGGGCGCGACTGCA	AGGGAGCTTACCGGAGCCGACCGGCTGGTTTGTTT
CAATCCACGCGCCCGCAGGGGGCGCGACCACAC	CTTTAGGCACTCAGCGGATGCTTTATCTAGGTTTC
AATCCACGCGCCCGCAGGGGGCGCGACACAACG	GGGCAAGCACCACTGATTACGTCTACATGTTTCA
ATCCACGCGCCCGCAGGGGGCGCGACATAGTCT	CGCCCTTGATGCTGCCGCTGCCAAAATCGTTTCAA
TCCACGCGCCCGCAGGGGGCGCGACCAACGCTG	ATGGTGTACTCGCTCATGTTGGTCTTGTTTCAAT
CCACGCGCCCCGCAGGGGGCGCGACGGCTGGGC	TGGGATGTCGGTATGTCAGTGTTCAAGTTTCAAT
CCACGCGCCCGCAGGGGGCGCGACCAATGCCGA	AACTCCAACTGAGGGCAGTAGCATGTTTCAATC
CACGCGCCCGCAGGGGGCGCGACCAAGTGCTGT	CGATGTTTGGCCGCTAATCGGTGAGTTTCAATCC
ACGCGCCCGCAGGGGGCGCGACCGGCTCCGTGT	GTAGCGGTGGCCTTTATCTGGTGGTTTCAATCCA
CGCGCCCGCAGGGGGCGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
CP032839.1\|AYK18867.1\|3091649_3092711_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK18871.1\|3094087_3094498_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK18874.1\|3099152_3099446_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
CP032839.1\|AYK18881.1\|3108598_3109042_+\|peptidase	unknown	unknown	gnl\|CDD\|182350
CP032839.1\|AYK18879.1\|3103928_3104657_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187782
CP032839.1\|AYK18875.1\|3099458_3100493_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
CP032839.1\|AYK18878.1\|3102015_3103932_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|187887
CP032839.1\|AYK18877.1\|3101156_3102005_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|187820
CP032839.1\|AYK18880.1\|3107332_3108250_+\|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
CP032839.1\|AYK18869.1\|3093285_3093633_+\|DUF1232-domain-containing-protein	unknown	unknown	gnl\|CDD\|225876
CP032839.1\|AYK18864.1\|3089266_3090250_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK18876.1\|3100489_3101119_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
CP032839.1\|AYK20313.1\|3104646_3107151_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP032839.1\|AYK20314.1\|3108294_3108483_-\|DUF3283-family-protein	unknown	unknown	gnl\|CDD\|288527
CP032839.1\|AYK18872.1\|3094490_3094748_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK18873.1\|3094859_3095360_+\|DNA-repair-protein-RadC	unknown	unknown	gnl\|CDD\|178801
CP032839.1\|AYK18868.1\|3092734_3093202_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK18865.1\|3090539_3091091_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
CP032839.1\|AYK18866.1\|3091159_3091495_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK18870.1\|3093652_3094078_+\|DUF2787-domain-containing-protein	unknown	unknown	gnl\|CDD\|371323

Protein	Function_ID	Function_description	E-value
CP032839.1\|AYK18874.1\|3099152_3099446_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.57752e-28
CP032839.1\|AYK18881.1\|3108598_3109042_+\|peptidase	gnl\|CDD\|182350	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit.	1.14105e-49
CP032839.1\|AYK18879.1\|3103928_3104657_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	3.5726e-98
CP032839.1\|AYK18875.1\|3099458_3100493_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	1.28181e-169
CP032839.1\|AYK18869.1\|3093285_3093633_+\|DUF1232-domain-containing-protein	gnl\|CDD\|225876	COG3339, COG3339, Uncharacterized conserved protein [Function unknown].	7.17907e-16
CP032839.1\|AYK18877.1\|3101156_3102005_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	4.00024e-113
CP032839.1\|AYK18880.1\|3107332_3108250_+\|WYL-domain-containing-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	5.0999e-20
CP032839.1\|AYK18878.1\|3102015_3103932_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	0
CP032839.1\|AYK18876.1\|3100489_3101119_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	3.15885e-39
CP032839.1\|AYK20314.1\|3108294_3108483_-\|DUF3283-family-protein	gnl\|CDD\|288527	pfam11686, DUF3283, Protein of unknown function (DUF3283). This family of proteins with unknown function appears to be restricted to Proteobacteria.	1.83162e-05
CP032839.1\|AYK18873.1\|3094859_3095360_+\|DNA-repair-protein-RadC	gnl\|CDD\|178801	PRK00024, PRK00024, DNA repair protein RadC.	2.28781e-61
CP032839.1\|AYK20313.1\|3104646_3107151_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.96215e-56
CP032839.1\|AYK18865.1\|3090539_3091091_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	1.19793e-56
CP032839.1\|AYK18870.1\|3093652_3094078_+\|DUF2787-domain-containing-protein	gnl\|CDD\|371323	pfam10980, DUF2787, Protein of unknown function (DUF2787). This bacterial family of proteins has no known function.	1.43421e-45

>CP032839.1|AYK18873.1|3094859_3095360_+|DNA-repair-protein-RadC
MLHHKLIAGEQPGTYLVTDLVNEDDLLNIANQIARQKLAKGVAITDKHLAQQALQTLLQSREHEVFAMLFLDNQHRILAYEELFRGTLSSASVYPREVVKRALALNAAALMLVHNHPSGHPEPSRADIEITQRLQSALALVDIRTLDHLVVGGEGIVSLAERGVLA
>CP032839.1|AYK18872.1|3094490_3094748_+|hypothetical-protein
MINAVIAIELEGYLEHDGQIEAVHDRDKPVDGYALYLRYENEQGNALAQWLCDHADRSWLIQVGNLLATSYYIPLHDYTTHTQAA
>CP032839.1|AYK18871.1|3094087_3094498_+|hypothetical-protein
MSQELALSHYSRQWLGQVAANAKITPIRSSQRWLLHLTPDSPNIRTVTLQVRWSGVQWQLLSITNADDGRTMSQPKDEICIDPKHSCFWRCQEGPVSLTDQPRVLASFLADLQRICIHRGYAVESDPIAEKESEDD
>CP032839.1|AYK18870.1|3093652_3094078_+|DUF2787-domain-containing-protein
MTIPFFRDGFAMPVAQALLVLLDQEVAKTELNLERLTQLTFNFRNPGYSAEQGGVHPVEIRLIRGLDGWLFDYVTDFSYQGQGQDAELCKELDFNFLDGEHTMLGWGPLRLAEARKLFDIWQSNFIAYCRLECFSVTVAGD
>CP032839.1|AYK18869.1|3093285_3093633_+|DUF1232-domain-containing-protein
MPPCIPPECEPFDHRGFWHKLWAFAKRAGRPFIETCLLLYYTSQKDDLPLWAKLLIYSALAYFISPIDAIPDVLPMGLTDDIAVLSAALASIAAFIDEQIRARVARKMRELFGQD
>CP032839.1|AYK18868.1|3092734_3093202_+|hypothetical-protein
MSEAWSMKWLIVLPGLLISSSVAFAYGEAGRWSSGWGQGTSEYKAVVNEQNNLYIACNDTRKVSMTATVQGKEYGSYAGQAFSIVVDGSQYDAPYETESRVGENNFFDMWGKLRKAKSISILTADGKQLALPTQEVASVLPATNTPEFDCLMWDQ
>CP032839.1|AYK18867.1|3091649_3092711_+|hypothetical-protein
MEYAAVIDDQNKLIISCDKNGKDIAMYATIKGIQVGTDVYDRTFDIKTSESYYFTPYVINGDSSISNFFKLWDEIRSGHSIMLDQRGPELPTANASQVLPARDSSEFICLTEGIKKKDYQAPAQVTHTRVGNEHRYSVVADDKHALYFACDNTNKITMRAILDGDEYDAEKGSFYVSVGDKAEPARVVTNNKTYLDKFWDGLRENKPLYLISQPDNITYVLTPQGGSSALPDRTSSDFTCLTADTISHKKNDALLAQQGPTTASTFSVNVRPIIPNKGLPSKVITVVSHSDRVKITKAVVNRGQCRVNSIYQLPQTLAFGNELMLYTGYDCNVLELSLSTTNGDVEYQFQPQN
>CP032839.1|AYK18866.1|3091159_3091495_+|hypothetical-protein
MEILQYDDFRTEKIAALINTRSTFEIVGVSGNMGSTVRILETTIESAGLKCRVYTQGRIAAAGATFLGGATGVAGMFATLGIAAHNLATYNPDYEIVKHVVDGSISVRYKK
>CP032839.1|AYK18865.1|3090539_3091091_+|recombinase-family-protein
MALVGYARVSTVGQSLDTQLQALAECSTIFQEKVSGARDDRPQLAQLLNFVREGDVVLVTKLDRLARNTRHLLEISEYLQSKQVALRILNLGINTSTPTGKLMLTMIGAIATFERELMLERQAEGIELAKQRGVYKGRKPTAMARGEEVLALAERGLAKTEIARQTGISLSSVQRILKTAATS
>CP032839.1|AYK18864.1|3089266_3090250_+|hypothetical-protein
MIKGLAITPPVIGRICIGKLVQKQDKWVPEKDDSFTLTTQVQQKGGWLLHPLHQHYSSQKSGQGQEQTKIRAIPVRVLFNDSDLNLRAEYSAFDRQTGRPLCVGNGEVARRVGAQGIEEVSCPGPERCAFAGQQGCKLYGRLNLFVEGQGDELGSFIFRTTGYNSVRTLAARLKYLEALSGGHTRYLPLTLRLRAKSTTQSYRTPVYYVDLTLREETNLTEAVRQAQEAALRDQEAGLAIDQMEQVARELLRNGQFEDIDEEVPMLLEEFYPEANSDETANDNAGVEATTSHAAPQSQATRTPQRPQPRRSPLTNKLGKGSPSPSPG
>CP032839.1|AYK18874.1|3099152_3099446_-|CRISPR-associated-endonuclease-Cas2
MMILVTYDVSLEDPDGPRRLRHLAKICLDYGVRVQYSVFECEVEPDQWVRFRDQLLKTYDPDVDSLRFYRLGKEWRSKVEHHGAKRALDIFKSDLII
>CP032839.1|AYK18875.1|3099458_3100493_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLQNSLYITRDGAYLHKERETLLVEQTVEGQRKKLLQIPIHSVGNIFCFGNVLVSPQLMGFCGENGTQLAFYDAFGRFQARVVGKQTGNVLLRRAQFRRADCVDSRENHIARNIVVAKVHSSRVVLQRHLRTYGSNPDVSAAAHRLRQIVAELKSQSDPERILGFEGEAARHYFGVFSQLINSQTGFVFDGRTRRPPKDPVNAMLSFMYSVLSKEISGALQGVGLDPQVGFLHEERPGRDSLALDLLEEFRAPIVDRLVLTLINRQQVKVGDFTTDMLGGVAMKEDTRRLLLQSWQARKQEEVTHPFLGEKVAVGLLPHVQAMLLAQHLRGDLAEYPPYVPR
>CP032839.1|AYK18876.1|3100489_3101119_-|CRISPR-associated-protein-Cas4
MDDPRLIPLSALQHYAFCPRQCALIHNGQVWAENWLTAQGLLLHQRVDQGEPETRKGVRYERGVLVSALRLGLTGKLDLLEKDLVSGELLPVEYKRGKPKSHDADAIQLCAQALCLEEMTGQSIQRGALWYWQIRHRTEVVLDAALRERTHQVIAQVALLLKSGEIPHVKPGKHCQACSLWEWCQPEYQARDRSVAYVADLFSMQEGAE
>CP032839.1|AYK18877.1|3101156_3102005_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSTLQNKIDYALVLRVKNANPNGDPLNGNRPRTDYGGFGEITDVCIKRKLRDRLQEAGQPIFVQSDDRKTDDETSLRNRAESSLNGLGKDNWNPKKTKKDDAAKKACAKWFDVRAFGQVFAFGKDADASGVSIPVRGPVTVQSAFSKEPVSITSTQITKSVNGEGDGSKRGSDTMGMKHRVDGISIYECYGSINPQLAEKTGFSDADADIFKSVLPRLFENDASSARPEGSMEVVKVIWWKHNCKAGQYSSAKVHRSLVVNADGTISVESLDGLVPEIIEGF
>CP032839.1|AYK18878.1|3102015_3103932_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWIQKLYETYDACVGREPEGAEPLMPICHTTQQVQIEVVLDQDGVFRRASVIDKGAATTMIPCTESSGGRAGSKPVNHPFADKLQYVAGDFLRFGGKVTSGFAAKPDEPHVSLLKDLRAWAESPYSHPKLKAVLKYLERGTLVSDLVSAGVLPIHSDGMLMKSWQGDKDAAPAIFKVIQATQTPEDAFVRWRVEEIGNPVSATWEDAELISAWVKHYQSTQSMRGYCMAAGTEMALAVQHPAKLRHGGDKAKLISSNDTAGYTFRGRFLGADEAVSVGFEVTQKAHNALRWLIPRQGSRNSEQVIVSWAVTGQPVPDPFASTLDLFGIEPVETSMATGHADTAQSFALRLKRAIAGYGTKLDPSTDIVVMGIDSATPGRMGITFYRELKGSEFLNRIEAWHANSAWPQYFGKDRKFIGAPAPRDIAEAAYGRRLDDKLSKATVERLLPCIIDSSQLPRDLVETTTRRASNRVGFKEHWEWEKCLGIACALFRGHNKQRNYQMALEQDRITRDYLYGRLLAVAENIESRALFVAGEKRDTMAARLMQRFADRPYSTWKTIELSLSSYKTRLRTQRAGFLYAMEKLLDEVMGLFQSEDFTKDSQLTGEFLLGYHCQRQALRSGDAASAEEQSTEETVAG
>CP032839.1|AYK18879.1|3103928_3104657_-|type-I-C-CRISPR-associated-protein-Cas5
MSTEHRNSIEFRVWGRYALFTDPLTKVGGEKFSYQVPTYEALKGICKSIYWKPTLVWVIDEVRVMKRIRTQTKGTKPQEYSGGNTLAIYTFLADVEYQVRAHFEWNTARPELEADRNEHKHHNIARRMLERGGRQDIFLGTRDCQGYVEPCEFGSGASELDSAGELALGLMFHGFDYPDEVGGDALHARFARIVMRDGVIRFDRPEQCSVRKRVRAMSVKTFGLSETVRAADEEWVELEKQA
>CP032839.1|AYK20313.1|3104646_3107151_-|CRISPR-associated-helicase/endonuclease-Cas3
MDPLTVKPAMAHYRKRDNTTHLVGEHLRSVGLLAAGFAGKLNIALAGELIGLLHDIGKYSQEFQDYIQSALGLVNCDEDDYVDADAQRGKVDHSSAGAQYIWRALSERGGLESLFAQVLALCVASHHSGLIDCLDVEGEDNFSRRMNKAKDKTHLDEVCRAADTEIMARIDELLGMPELFTELRNSIGNIFAKNREPHKGKLRNAHQQIGLAVRYLFSCLIDADRIDTADFEHQRVKLFRPNGDYAKWPALITRLERKLSAMLPTRPIDHLRRDISQHCLDAATRPGGTYTLTVPTGGGKTLASLRFALHHAQQRKLDRIIYVIPFTSIIEQNAQVVRDILEPADAPEDHGKIVLEHHSSVTPEQQTWREKILCENWDAPVVYTTMVQLLEALFGAGTRGARRMHQLANTVLIFDEVQTLPIKCTHLFNNAINFLTEQCNSTVVLCTATQPLLHKVAAEKGAIRLAAQHEIMPDVHKLFADLKRVDVRDQRKPGGWSVVEVAQLALDELRRAGSSLVIVNTKCAAQEVFELCHTQLEQGQAFHLSTDMCPAHRKDELANLRARLAEGLPTLCVSTQLIEAGVDVDFGVVIRYLAGLDSIAQAAGRCNRNGRPEPGIVHIVNPRPEDEKLTWLPDIAKGRDVALRLLDDYAVVPARYADNLFGPAALSDFYQYYFFERQKEMDYSVSASALGRDDSIANLLAENSGADADCRRKYGKTPERMLNQSFMAAAKAFKAIDAPTQGVVVPYGPEGIDIIAKLHASFDVELDVPLLRRAQQFTVNVFPNVFEQLVKAGAVHSADPNKQARILTLDPRYYSPQFGISTEPVSTMEALYVD
>CP032839.1|AYK18880.1|3107332_3108250_+|WYL-domain-containing-protein
MPANELTWDQTLRFRLLEIVLQWEGRLTTNHLTTAFNIGRQQASRDINRYMSDYAPEGLAYDRRLKGYKPTAQFVPRFSEGKVDEYLMLLHREKQHQRQHEAGLLTLPLMDLRYGHIEILDVPNRHIDPKIVRGLVQAARGQLRVDVDYVSLSSEEQSGRNIVPHTLVYDGIRWHVRAYCEKKGVYLDFVMSRFRGEPELLDTSPHGRDQDLEWNTQVTAVVIPNPTLSAGQQAIIASDYAMPDGKLLLNQRIPLMHYALERMQVSYNGDHEQHPLLYPLVLANRDELVAKGCIFKLRSPDLRES
>CP032839.1|AYK20314.1|3108294_3108483_-|DUF3283-family-protein
MSHNLCSLPKEQQERVEVEKAAAYAVWKEHNGHLASAKSEASQHKGELGSYFLEQVSRYKRG
>CP032839.1|AYK18881.1|3108598_3109042_+|peptidase
MKLLTPDPSPAEVTIPLFLHRASCGFPSPASDYLEGKLDLNTHCVAHPAATFYLRAEGESMTGVGIFPGDLLVVDKSLTPRHGDVVIALLDGGFTVKTLQLKPRLRLLPANPAFAPIDPCMSLSLELFGVVTHVIGNLRQRDGYSAR

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Crispr_ID: CP032839_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032839_9

3191723-3191829

Orphan

Consensus_repeat	Method
GACGTGGAGCTGCTGGGTATCCAGTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032839_9

>merge|CP032839|9|3191723-3191829|CRISPRCasFinder
GACGTGGAGCTGCTGGGTATCCAGTAACCGCGCAGGATGCTCCAGTGGCAATATCCCACTGAGCGCCCGTCCTGATCTTTGACGTGGAGCTGTTGGGTATCCAGTAA

>CP032839|9|9|3191723-3191829|CRISPRCasFinder
GACGTGGAGCTGCTGGGTATCCAGTAA	CCGCGCAGGATGCTCCAGTGGCAATATCCCACTGAGCGCCCGTCCTGATCTTT
GACGTGGAGCTGTTGGGTATCCAGTAA

Protein	Signature genes	Signature genes Name	Protein_function
CP032839.1\|AYK18939.1\|3181887_3182490_-\|HTH-type-transcriptional-regulator-PuuR	unknown	unknown	gnl\|CDD\|182158
CP032839.1\|AYK18945.1\|3191893_3193675_-\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
CP032839.1\|AYK18953.1\|3203587_3206917_+\|mechanosensitive-channel-MscK	unknown	unknown	gnl\|CDD\|236892
CP032839.1\|AYK18940.1\|3184492_3185782_+\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|236032
CP032839.1\|AYK18951.1\|3201473_3201716_-\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK18948.1\|3195472_3196699_+\|exonuclease-subunit-SbcD	unknown	unknown	gnl\|CDD\|182871
CP032839.1\|AYK20320.1\|3179650_3180079_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|236715
CP032839.1\|AYK18943.1\|3188302_3189649_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
CP032839.1\|AYK18954.1\|3207783_3209814_+\|M13-family-peptidase	unknown	unknown	gnl\|CDD\|341056
CP032839.1\|AYK18949.1\|3196695_3200448_+\|exonuclease-SbcC	unknown	unknown	gnl\|CDD\|182330
CP032839.1\|AYK18946.1\|3193851_3194763_-\|recombination-associated-protein-RdgC	unknown	unknown	gnl\|CDD\|234726
CP032839.1\|AYK18950.1\|3200541_3201306_-\|dioxygenase	unknown	unknown	gnl\|CDD\|153375
CP032839.1\|AYK18938.1\|3180564_3181842_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
CP032839.1\|AYK18941.1\|3186148_3187498_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
CP032839.1\|AYK18936.1\|3179076_3179565_+\|TIGR00645-family-protein	unknown	unknown	gnl\|CDD\|179964
CP032839.1\|AYK18952.1\|3202024_3203437_+\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
CP032839.1\|AYK18937.1\|3180191_3180440_+\|DUF3297-family-protein	unknown	unknown	gnl\|CDD\|371696
CP032839.1\|AYK18942.1\|3188036_3188303_+\|hypothetical-protein	unknown	unknown	unknown
CP032839.1\|AYK20319.1\|3177531_3178893_+\|GHKL-domain-containing-protein	unknown	unknown	gnl\|CDD\|182754
CP032839.1\|AYK18947.1\|3194940_3195369_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|236715

Protein	Function_ID	Function_description	E-value
CP032839.1\|AYK18939.1\|3181887_3182490_-\|HTH-type-transcriptional-regulator-PuuR	gnl\|CDD\|182158	PRK09943, PRK09943, HTH-type transcriptional regulator PuuR.	6.23689e-109
CP032839.1\|AYK18945.1\|3191893_3193675_-\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
CP032839.1\|AYK18953.1\|3203587_3206917_+\|mechanosensitive-channel-MscK	gnl\|CDD\|236892	PRK11281, PRK11281, mechanosensitive channel MscK.	0
CP032839.1\|AYK18940.1\|3184492_3185782_+\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|236032	PRK07495, PRK07495, 4-aminobutyrate--2-oxoglutarate transaminase.	0
CP032839.1\|AYK18948.1\|3195472_3196699_+\|exonuclease-subunit-SbcD	gnl\|CDD\|182871	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional.	1.11154e-73
CP032839.1\|AYK20320.1\|3179650_3180079_+\|N-acetyltransferase	gnl\|CDD\|236715	PRK10562, PRK10562, putative acetyltransferase; Provisional.	8.55318e-42
CP032839.1\|AYK18943.1\|3188302_3189649_+\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	1.42277e-41
CP032839.1\|AYK18954.1\|3207783_3209814_+\|M13-family-peptidase	gnl\|CDD\|341056	cd08662, M13, Peptidase family M13 includes neprilysin and endothelin-converting enzyme I. The M13 family of metallopeptidases includes neprilysin (neutral endopeptidase, NEP, enkephalinase, CD10, CALLA, EC 3.4.24.11), endothelin-converting enzyme I (ECE-1, EC 3.4.24.71), erythrocyte surface antigen KELL (ECE-3), phosphate-regulating gene on the X chromosome (PHEX), soluble secreted endopeptidase (SEP), and damage-induced neuronal endopeptidase (DINE)/X-converting enzyme (XCE). Proteins in this family fulfill a broad range of physiological roles due to the greater variation in the active site's S2' subsite allowing substrate specificity. NEP is expressed in a variety of tissues including kidney and brain, and is involved in many physiological and pathological processes, including blood pressure and inflammatory response. It degrades a wide array of substrates such as substance P, enkephalins, cholecystokinin, neurotensin and somatostatin. It is an important enzyme in the regulation of amyloid-beta (Abeta) protein that forms amyloid plaques that are associated with Alzeimers disease (AD). ECE-1 catalyzes the final rate-limiting step in the biosynthesis of endothelins via post-translational conversion of the biologically inactive big endothelins. Like NEP, it also hydrolyzes bradykinin, substance P, neurotensin, and Abeta. Endothelin-1 overproduction has been implicated in various diseases including stroke, asthma, hypertension, and cardiac and renal failure. Kell is a homolog of NEP and constitutes a major antigen on human erythrocytes; it preferentially cleaves big endothelin-3 to produce bioactive endothelin-3, but is also known to cleave substance P and neurokinin A. PHEX forms a complex interaction with fibroblast growth factor 23 (FGF23) and matrix extracellular phosphoglycoprotein, causing bone mineralization. A loss-of-function mutation in PHEX disrupts this interaction leading to hypophosphatemic rickets; X-linked hypophosphatemic (XLH) rickets is the most common form of metabolic rickets. ECEL1 is a brain metalloprotease which plays a critical role in the nervous regulation of the respiratory system, while DINE is abundantly expressed in the hypothalamus and its expression responds to nerve injury. A majority of these M13 proteases are prime therapeutic targets for selective inhibition.	0
CP032839.1\|AYK18949.1\|3196695_3200448_+\|exonuclease-SbcC	gnl\|CDD\|182330	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional.	1.14193e-84
CP032839.1\|AYK18946.1\|3193851_3194763_-\|recombination-associated-protein-RdgC	gnl\|CDD\|234726	PRK00321, rdgC, recombination associated protein; Reviewed.	0
CP032839.1\|AYK18950.1\|3200541_3201306_-\|dioxygenase	gnl\|CDD\|153375	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine. This subfamily is composed of plant 4,5-DOPA Dioxygenase, the uncharacterized Escherichia coli protein Jw3007, and similar proteins. 4,5-DOPA Dioxygenase catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine (4,5-DOPA). The reaction results in the opening of the cyclic ring between carbons 4 and 5 and producing an unstable seco-DOPA that rearranges to betalamic acid. 4,5-DOPA Dioxygenase is a key enzyme in the biosynthetic pathway of the plant pigment betalain. Homologs of DODA are present not only in betalain-producing plants but also in bacteria and archaea. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon.	2.98176e-100
CP032839.1\|AYK18938.1\|3180564_3181842_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	1.72136e-78
CP032839.1\|AYK18941.1\|3186148_3187498_+\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	2.67392e-45
CP032839.1\|AYK18936.1\|3179076_3179565_+\|TIGR00645-family-protein	gnl\|CDD\|179964	PRK05208, PRK05208, hypothetical protein; Provisional.	7.64639e-85
CP032839.1\|AYK18952.1\|3202024_3203437_+\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
CP032839.1\|AYK18937.1\|3180191_3180440_+\|DUF3297-family-protein	gnl\|CDD\|371696	pfam11730, DUF3297, Protein of unknown function (DUF3297). This family is expressed in Proteobacteria and Actinobacteria. The function is not known.	6.84857e-46
CP032839.1\|AYK20319.1\|3177531_3178893_+\|GHKL-domain-containing-protein	gnl\|CDD\|182754	PRK10815, PRK10815, two-component system sensor histidine kinase PhoQ.	1.03314e-71
CP032839.1\|AYK18947.1\|3194940_3195369_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|236715	PRK10562, PRK10562, putative acetyltransferase; Provisional.	1.29338e-33

>CP032839.1|AYK18943.1|3188302_3189649_+|APC-family-permease
MASQNAKLLKTLTLTQVIVMGLAYLTPMAVFDTFAIVGDITDGRVATAYLLALGGILLTAFSYGHLVRKFPSAGSAYTYAQKVFNPYVGFMVGWSSLLDYMFMPMINILLAKIYLTAMFPGVEPWVFIFGLVTVMTFLNLRGINLVANFNGLIVVIQLAIITLFIGLMAWGIYHGEGAGTLMSSRPFHFESAQLVPLFTGATILCFSFLGFDGLSSLSEETPNAGKVIPKAIVLTALIGGIIFVVVSYCLQLYFPSLARFQHPDAVLPEIALYVGGTFFQSVVLVCTTVAVLASGMAAHAGVSRILYVMGRDRMIPERVFGYIHPKYRTPAINVLMVGGLALSAVSFDLDTALALVNFGALVAFSFVNLSVIGQFWVREKRNKTLKDHVIYLLMPLLGAATIGALWINLEQSSLELGLIWAGLGATYLFLRLAVFRIPFRQYEEAADA
>CP032839.1|AYK18942.1|3188036_3188303_+|hypothetical-protein
MFTATSVFVFLKCSTNPPQEAGTFPEVIFEIAKQSPDVERITMGRFNAFLPVQPGMRLPGALDVQACESIVSLRSLQARAAALIEEKA
>CP032839.1|AYK18941.1|3186148_3187498_+|APC-family-permease
MAAQQVGLKKTLKLWQVVVMGLAYLTPMAVFDTFGIVTEITEGHVPTAYLFALIGMLFTALSYGHLVRKFPSAGSAYTYAQKVFHPYVGFMVGWTSLLDYMFMPMINMLLAKIYLEALFPNVEPWTYIFGLAAVMTALNLRGIKLVANFNSLIVVMQFSIIAIFIGLIAWGVHNGEGLGTVASSRPFFSEQIQVSPLLMGASILCLSFLGFDAISTLSEETPDADRVIPRAIVLTALIGGVLFVTTSYFLQLYFPDISRFQHPDAVLPEIALYVGGKLFQAVVLVCTTVAVLASGLASHAGVSRLLYVMGRDRALPARFFGYIHPKWQTPAFNVLLVGLLALSAVSLDLEMALALINFGALVAFTFVNLAVIAHFYVKLGRNKCLKDHLMYLLLPLCGAACIGVLWLNLEPSSFELGLVWAALGAIYLFLRLTVFRIPLHTADKVEIAQ
>CP032839.1|AYK18940.1|3184492_3185782_+|4-aminobutyrate--2-oxoglutarate-transaminase
MSQSESNKAWQARREAAVVNGVGTLLPVFIDRAQNAELWDVEGNRYIDFASGIAVLNTGHNHPKVVAAVREQLEKFSHTCFQVTPYPGYIELAEKLNALVPGPTPKRTLFLSTGAEAVENAIKIARAHTGRSGTIAFKGGFHGRTMMGMALTGKVVPYKTGFGPFPGEVYHIPFPADYLGVSEEDALHALELCFSADIEPSRVAAIIIEPVQGEGGFYPASPSFMQKLRSVCDQHGILLICDEIQSGFCRTGKTFATEYAGIEPDIMTLAKSLAGGFPLSAVVGKAEIMNAAKPGGLGGTYAGSPIACAAALAVLQVIDEEKLNQKALDQGEQIKAGLERIAERFDCIGQIRGPGAMVAMELVKRRDASQPDPDLTKRLVAEAGKRGLVLLSCGVRANVIRFLAPLTAPAAVIDEGLQLLEKSLEAVLA
>CP032839.1|AYK18939.1|3181887_3182490_-|HTH-type-transcriptional-regulator-PuuR
MSGPQSRESVARPLSGADAGARTMGERLAAVRHQLGLSQRRAAELSGLTHGAICMIEQDKVSPSVASLQKLLTIYGLPLSRFFAEEESRTPEVVIKADQLIELGSQGVSLKLVHNGNNRRQLGFMLETYPPGTDTGGQVTHQGEEVGTVLEGSVILTVAGQSYQLEAGDSYVIDTGEPHSFSNPSGETCRIVSAHTPASF
>CP032839.1|AYK18938.1|3180564_3181842_-|FAD-binding-oxidoreductase
MTEHVNSYYAASANKHAPYPTLTEQLECDVCVIGAGYTGLSSALHLVEKGYKVVVLEAARVGFGASGRNGGQIVNSYSRDIDTIEANCPPDQARLLGSMLFEGGQIIRERIKRYNIQCDLQEGGVFAAETEKQLHELKSQYARWQKWGNDQLELLDAKGVREVVASDRYVGALLDKSGGHIHPLNLALGEAEAIRIQGGQIFEQSAVTSITPGQPALVKTAKGAVKARFVVVAGNAYLGNLVPELASKSMPCGTQVIATEVLGEERARSLLPQNYCLEDCNYLLDYYRTSGDHRLLYGGGVVYGARDPADIERLIIPKMLKTFPQLADVKVEYTWTGNFLLTLSRLPQFGRIGPNIYYMQGYSGHGVTCTHLAGKLLSEVLSGQAERFDAFAKLPHYPFPGGRLFRIPFTAAGAAWYTLRDRLGV
>CP032839.1|AYK18937.1|3180191_3180440_+|DUF3297-family-protein
MSDTSTKPALPDHLSCNPRSPHYVAACFEHPIGIRLNGKERTDVEEYCISEGWVKIPSPKALDRRGQPILIKLKGTVEAFYS
>CP032839.1|AYK20320.1|3179650_3180079_+|N-acetyltransferase
MIRPLSATDLDAAVELWYQASVQAHDFIPTAFWREQRAAMRDIYLPASQSWVYEESEQLLGFISWYQGSVAALFISPDHQSHGLGRQLLEHLKAQYDRLELTVYAENEQARRFYSRNGFKEGEQQLCEHSCHPELVMHWQRG
>CP032839.1|AYK18936.1|3179076_3179565_+|TIGR00645-family-protein
MENMFERLMYASRWIMAPIYLGLSLILLALGVKFFQEILHILPNILEMKEVDLVLVTLSLIDITLVGGLIVMVMFSGYENFVSRLDVGDESDKLVWLGKLDAGSLKNKVAASIVAISSIHLLKVFMNAENLPNDKIKWYLLIHITFVLSAFAMGYLDKLTRK
>CP032839.1|AYK20319.1|3177531_3178893_+|GHKL-domain-containing-protein
MKMIRSSLHIKLLLSSLLVIALIMGFAVYALYLGHVEEQTQKASARMQENLAKLFSSTEPDDKGSNVELGRISRGAGDRNLDTLICRADGDLVWSSLHMPEVIKAKQTICGDLMKYLGGMDLDYFFKKHTIKNGESYFVYSLRFIRNPGSGTTAYYVVMIDSAKRYHEESRTYLYQTAKQALLAYMLLAGLLLLTTFWSLSSLRIIARQIDDIRAGNRDDLSSDFERELAPLTDSINQLLENERQQTQRYQHALNDLAHSLKTRLALIQITTREVKLGREIHDNINEQILTMDQMIQYQLRRAVTGRQRLASKGTEPVPLIEKLLASLTKVYRHKKLQTHFKFDDDALFHGEQGDLMELMGNLLDNACKFAISEVKVTVRRHLERLRIEVEDDGPGIDPAKSEQIFQRGVRADSSPGQGIGLAVVTEIVHSYGGQIRVDESPLGGARFTLDLP
>CP032839.1|AYK18945.1|3191893_3193675_-|gamma-glutamyltransferase
MLRKPLGLAVALALLAGCASDNGFHYTPPAQTLIAPEAASGWTDKQGWQGHDFMVAAANPLAVDAGYQIIKAGGSAVDAAIAVQLVLTLVEPQSSGIGGGTLLLVWDGHKVSAVDGRETAPAAATDQLFMQDGKPLAFYDGVVGGRSVGVPGTLRALALAHQRYGKLPWAVLFEPAITLAEQGFVISPRLATLLAKDPYLARDPEARAYFYQADGSPKTAGSRLINPALAKVLRTLATEGVDAFYRGPLADAMVAKVRQHPTNPGVLAATDLASYQAKVRDGLCFDYRQSKICGFPTPSSGTLALGQIFGMLESRDMAALKPITTKEGGLAASSEAIHLYSEAARLAFADRNQYVADSDFVSVPVQGLLDKGYLAERGKLVGQLSMGIAKPGTPPLALERGKDATPELPSTSHVSIVDKVGMAISMTSSIEDGFGSRQMVNGYLLNNQLTDFSFASVDAAGLPVANRVEPGKRPRSSMSPLLVFDKPSGELTMTLGSPGGSAIINYVGKTLLGTQDWGLNLQQAINLPNFGSRNGPTELEAGRTPMSVVEGLKARGHEVVLNEQTSGLQGVERNAGGWFGAADPRREGIAKGE
>CP032839.1|AYK18946.1|3193851_3194763_-|recombination-associated-protein-RdgC
MWFKNLQIYRFTRPFDLTVDQLETQLEACAFTPCGSQDISRFGWVKPLGKFGSTLTHSASGHILICARKEEKMLPGTVVKEMLAEKVEAIEFEQGRALKKKEKEALKEEILHTLLPRAFSRTSQTFAWINPADNLMVVDAGSAKKADDLLALLRKSIGSLPVVPVALKNPPEITMTEWLNEGNLPASFTLEDEAELRSAMEHGGIIRCKQQDLMTDEIKNHLANDKLVTKLALNWGETVSFVLGDDLSIKRLKFSEELREQNDDVTSEDPAARLDADFALVTAELSQFIPALFAALGGEEQSI
>CP032839.1|AYK18947.1|3194940_3195369_+|GNAT-family-N-acetyltransferase
MLRPSRPEDMEEIVEIWLLASLQAHDFVDASCWWQAQEDLRTRYLDRAAIWVFEERGDLLGFMALVDNYLAALFVRPDRQGRGVGHALLQEAKRQGASLHARVFVENDQAVRFYRRHGFVIEAEESDPLTGHPQYRMCCEPA
>CP032839.1|AYK18948.1|3195472_3196699_+|exonuclease-subunit-SbcD
MKILHTADWHLGHQLHGHDRRFEHDAFLDWLSDTLKAREIDALLVAGDLFDTANPPASAWQQLYRFLARLRAEMPHLNMVLIGGNHDSPSKLDAPHELLRAFDLHLVGSISRDSEGKLETDRLLVPLQDKEGKIAAWCAAVPFLRSSDLRVEQLAEGQDRLIEGVRQVYAEVLAEGRARCGEDLPLIAMGHAYLAAGQLSELSERRVLGGNQHALPAELFAGADYTALGHLHLAQSPAEGVHYSGSPLPLSLAEANYNHQVLEVTFAEGKQAGLERLPVPRAVEMIRLPQSSLDDALKAIASLELPACPQEAQPFLEVRLLLPKPEARIRERILAAIADKPVRLARISTQYQGSGEGLADGRERRRLDELSPTEVFRLCYQRQFEGEPEAGLVASFEEILEQVKESNQ
>CP032839.1|AYK18949.1|3196695_3200448_+|exonuclease-SbcC
MKILSLSGENLASLTGPFTIDFTRGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPRFIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRIWLARWAVRRARNRSEGRFQAQERTLTDVESGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFLKSDANERSALLERMTGTELYSAISIQTYERAREEQQKLATIAQRLGDVALMDEATREQWVSQQVSLSTTLKYEQQQQLLMQDLRDLNSRIAAQLQGCAEGQAALDAALQAHGAAAPEREEFTRAEQAQVARADHDELARLTLEVQQQEKLIAELGPELAKLEEQTQQSALTEQQLLAEKIAAEREWGTLQPELKRAQELDTRIREKVQQLQKIQQEGAQEREVQLTLEQGWREQSRQVELLKLQHQQWGLWLEEHKELAPVARQWQPLLTAMQDWAEDADKLQQLLTLRDHKLRALQQLQRQLEQGQQERDYWQHEQARLQQQQNELQEQQWESRLAKAQEQWQQQTEQLGQLRQLLELADYGRNHGEQHGRLQQEIAQLEQALGKLATLGEELAPARERLALQRDEARHALEQSRAIASFEQYRHILSDGEPCPLCGSGEHPYSQSQPQVAGILGQLAERARSLELEWERLNHQYIQCESERQELARQLAVRQQHLPELENRAEQLTQRWQQLGGDTLLGHPLPLRQSPIEWNELMSTLLGRGQALELGLAQSQQQLRQAQLGQQQLQGVRQQLSQLAAQHQQFDQQWQEADRQRIALEGEVKGMGEQEATLRQRLEQGAHRLDEQMGGQPWRQWLGSQQWHEWQRACEAWLHGQSEWERLASEIASLTPALSAQEARLQTQRELLHKLERDYKEHEQQRQGLLTSRNGCLGGEEIPLVESRWQQRLQQLASELELMQSGARALRERQTELKTRLTHVEQEKQTSSRRKREVLGRWAAHASTLGIAEYDLRRLLAISPDELKARRTALQGLEDAVGEARTRLAERQRALALEESKRDRYREHHPELAALPDAALSDQLAALDARYHALEEQLFECKSKLAQAEAAALKAGSLQQELAAQQAVADHWQQLCDLIGQANGAKFRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLALQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDSLDLALASLDSLQAAGRQIGVISHVQTLVERIGVQIRVEALGGGESRVVVP
>CP032839.1|AYK18950.1|3200541_3201306_-|dioxygenase
MSLAPVWFISHGAPDLVLREQPATRFLRTLRLGELKGLVVISAHWLSRELQINVEPKPALMYDFYGFPEPLYRMRWPASSPEWLQQGVSDQLALAGLTSTPVRRELDHGVWSPLSLIDPNSELPLVQISIPASFTPAQLWQLGEVLGTLRSQGIGILASGAITHNLRALAPEGSPVPEWASQFVDWLEQKMADKDRLALLDYRQQAPGAVESHPHDDHLRPLFVALGAADGVAPTRLHESWDGGSLYMGAYRFG
>CP032839.1|AYK18951.1|3201473_3201716_-|hypothetical-protein
MKNSHETGWTLLLLGAALLLVQTLPARYWPDNARLLAIFSLPVKGEVAAEGLAWREWQDHSAATRMALRAARSLPDAPQP
>CP032839.1|AYK18952.1|3202024_3203437_+|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESKEMLAKMLDAGMNVMRLNFSHGDYAEHGSRISNLRAVMAETGKHAAILLDTKGPEIRTMKLEGGNDVALVAGQTFTFTTDQTVVGNKDKVAVTYAGFANDLRVGNRILVDDGLIGLDVIEITEREVICKVLNNGDLGENKGVNLPGVSIKLPALAEKDKRDLIFGCEQGVDFVAASFIRKKEDVLEIREHLKAHGGENIQIISKIENQEGLDNFDEILAVSDGIMVARGDMGVEIPVEEVIFAQKMIIAKCNKARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVTIMATICERTDAVMPSNLSAANDSNKLRITEAVCKGAVETSEKLDAPLIVVATEGGKSAKAIRKYFPKAWILAITTNKKTAAQLVLTKGVVAHVVDSIASTDDFYRIGKEAALEIGMGLKGDVVVMVSGALVPSGTTNTASVHVL
>CP032839.1|AYK18953.1|3203587_3206917_+|mechanosensitive-channel-MscK
MPSIRFKRVSATLLPLLCLLASLCVPQAMAQDVPSRNAVQRALDGLGKSETLTVSQQADQKLLTETLGLLDSIDKEEGKAKTQAQRIRNLPTELREISAKLDALTKGKSAEQIKSEYASMSLAELDSRQPEVLANMQAAQEALGAIGSQLTSLQTLPERAQASMSRAYQRSQEIRTRLNAGESVSSAEKMKLGAELALLDLQLAHLQKELDNRTSMQDLAIKQRDYQSARLASEEQKLQLLQDQSSAKRLGDTEKTAEQTGELVATEDSPLVQKEQELNHQLSQQLIGATTSLNSLVQKNLQAKSWLERGIQTERNLNEQVQMLKGNLLLSRILYQLYQQLEAAPTIAVKNLEEQIADLHLAQFELSQQRDQLFQKNLYLDNLIAGSKDPVSEEDKESLAKLLDTRINLLDQLNRQLDSQLTNAISLQLTQQQLARVYASIEFTLQQHIFWVSSNKPIDSKWFISWPAQAYKQASDWVLKPDWKRWREELLGISLLAFPLLLIGGLLVWKRPALVEREKKITKDLGRFRQDSQWHTPRALLYTVLQRLPGSMFILAGGLLLTYCGLLSPKLMFQITLNLALGYLVFSVYLAVMRPGGIAETHFRIPKAELQAKRNSMRYIWLPLLPLIMLATKAVVEPSTLGNDVIGQAMTLTLLGLAAYLVFPISRARIKGEASMQKSLIAIALALAPVALIVLAVLGYYYTALKLTGRLIESFYLIIIWSLVYRTALRGLELAARRLAYRRAVAKREHKSSEDAEGGESIEEQPMDLEDVSQQSLRLTRTVLMLIFGVAFYWLWSDLVAVFSYLDSMVLWHRSEGTGANAVLFPISLSDVLIGFLLLGGAWSLARNLPGLLEVLVLSKLNLAQGTAYAITTMLNYVLIGFGSLTALSMMGVQWDKLQWVAGGLSVGIGFGMKEILSNFVSGIIILFERPVRIGDTVTIGSFSGTVSRIRIRATTLTDFDRKEVIIPNQQLMTERLINWSLSDTVTRVIVRVGVAYGSDLELTRTLLKQAADENSRVLKDPAPIVYFLTFGASTLDHELRFFVSELGDRNPAVDELNRKIDQLFRENGIEIAFNQMDVYIKNMQGEEQKVESNSAALPPPAEDGKQPA
>CP032839.1|AYK18954.1|3207783_3209814_+|M13-family-peptidase
MKQQRSMIASLIALALLGLAPCAGATSGHSGVDLASMDNSVRAADDLFRHVNGNWLAQTQIPDDMPGQTIGNLLADKSLEDRKVLLEELLKRPQQAGTPRQQIADLYASYLDQAGRDAKGLTPIQPLRDEIMAIHDGASLATYFAWVNKLGGGAPFGIGFMADKKQPDSYGIYLQQSGLGLPDRDYYLKEDAASKALRASYEQFITALLNHAGVEGASEQAHRILALETRLASLQWDRVKRRDDNLTYNKLPIARLSQLLPTLDWQRYLTEAGIAGETEIIVSEPDYLEKLAAVMQETSIAQWQSYCLFHLLRTYAPYLDSQSNALHFAFYGTTLSGIPRQREPWKQAMEVLDDYLGQAVGKLYVERYFPAEAKAQMATMVRNLIAAYRQEIGELDWMSAPTKQQALAKLEKVRVKIGYPDQWQDYSAIEIRPDDLVGNAQRAATVRYNEHLARLHQPVDREEWFDNPQTVNAYYSPNNNEIVFPAAILQPPYFDLKADDAVNYGAIGAVIGHELSHGFDDQGAKFDGNGALHNWWAPADLKEFTARAQKLAKQYDRFEPIKGEHVNGQLTLGENIGDLGGLTIAHKAYQLALGNRLPAVLDGFTAEQRFFIGWAQVWKGKYRPELAAVLLKTDPHSPLEYRVNGVVANMPAFYRAFAIKPGDKLYLPPSERVKIW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP032839_8	8.29\|3097354\|33\|CP032839\|CRISPRCasFinder	3097354-3097386	33	KY290953	Aeromonas phage 51, complete genome	14095-14127	2	0.939
CP032839_8	8.29\|3097354\|33\|CP032839\|CRISPRCasFinder	3097354-3097386	33	NC_019527	Aeromonas phage vB_AsaM-56, complete genome	14095-14127	2	0.939
CP032839_8	8.29\|3097354\|33\|CP032839\|CRISPRCasFinder	3097354-3097386	33	KY290954	Aeromonas phage 56, complete genome	14095-14127	2	0.939
CP032839_8	8.19\|3096708\|38\|CP032839\|CRISPRCasFinder	3096708-3096745	38	NZ_CP047377	Aeromonas salmonicida subsp. salmonicida strain J410 plasmid p1AsJ410, complete sequence	44593-44630	3	0.921
CP032839_8	8.19\|3096708\|38\|CP032839\|CRISPRCasFinder	3096708-3096745	38	NZ_CP048224	Aeromonas salmonicida subsp. salmonicida strain J223 plasmid pASal5, complete sequence	107993-108030	3	0.921
CP032839_8	8.19\|3096708\|38\|CP032839\|CRISPRCasFinder	3096708-3096745	38	NZ_CP047375	Aeromonas salmonicida subsp. salmonicida strain J409 plasmid p1AsJ409, complete sequence	57128-57165	3	0.921
CP032839_8	8.19\|3096708\|38\|CP032839\|CRISPRCasFinder	3096708-3096745	38	NC_009350	Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence	136371-136408	3	0.921
CP032839_8	8.19\|3096708\|38\|CP032839\|CRISPRCasFinder	3096708-3096745	38	NZ_CP038103	Aeromonas salmonicida subsp. salmonicida strain SHY16-3432 plasmid pAsa5-3432, complete sequence	161258-161295	3	0.921
CP032839_8	8.19\|3096708\|38\|CP032839\|CRISPRCasFinder	3096708-3096745	38	NZ_KY555069	Aeromonas salmonicida subsp. salmonicida strain 01-B526 plasmid pAsa5, complete sequence	138967-139004	3	0.921
CP032839_8	8.19\|3096708\|38\|CP032839\|CRISPRCasFinder	3096708-3096745	38	CP052035	Aeromonas salmonicida subsp. salmonicida strain J411 plasmid p1AsJ411, complete sequence	8551-8588	3	0.921
CP032839_8	8.19\|3096708\|38\|CP032839\|CRISPRCasFinder	3096708-3096745	38	CP052035	Aeromonas salmonicida subsp. salmonicida strain J411 plasmid p1AsJ411, complete sequence	80809-80846	3	0.921
CP032839_8	8.22\|3096907\|36\|CP032839\|CRISPRCasFinder	3096907-3096942	36	KY290953	Aeromonas phage 51, complete genome	13925-13960	3	0.917
CP032839_8	8.22\|3096907\|36\|CP032839\|CRISPRCasFinder	3096907-3096942	36	MK813942	Aeromonas phage 4_4512, complete genome	863-898	3	0.917
CP032839_8	8.22\|3096907\|36\|CP032839\|CRISPRCasFinder	3096907-3096942	36	MK804892	Aeromonas phage 4_D05, complete genome	13676-13711	3	0.917
CP032839_8	8.22\|3096907\|36\|CP032839\|CRISPRCasFinder	3096907-3096942	36	NC_019527	Aeromonas phage vB_AsaM-56, complete genome	13925-13960	3	0.917
CP032839_8	8.22\|3096907\|36\|CP032839\|CRISPRCasFinder	3096907-3096942	36	KY290954	Aeromonas phage 56, complete genome	13925-13960	3	0.917
CP032839_8	8.7\|3095916\|37\|CP032839\|CRISPRCasFinder	3095916-3095952	37	NC_049453	Klebsiella phage ST13-OXA48phi12.1, complete genome	26727-26763	4	0.892
CP032839_8	8.17\|3096572\|41\|CP032839\|CRISPRCasFinder	3096572-3096612	41	NZ_CP048224	Aeromonas salmonicida subsp. salmonicida strain J223 plasmid pASal5, complete sequence	108279-108319	4	0.902
CP032839_8	8.17\|3096572\|41\|CP032839\|CRISPRCasFinder	3096572-3096612	41	NC_009350	Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence	136082-136122	4	0.902
CP032839_8	8.17\|3096572\|41\|CP032839\|CRISPRCasFinder	3096572-3096612	41	NZ_CP038103	Aeromonas salmonicida subsp. salmonicida strain SHY16-3432 plasmid pAsa5-3432, complete sequence	160969-161009	4	0.902
CP032839_8	8.17\|3096572\|41\|CP032839\|CRISPRCasFinder	3096572-3096612	41	NZ_KY555069	Aeromonas salmonicida subsp. salmonicida strain 01-B526 plasmid pAsa5, complete sequence	138678-138718	4	0.902
CP032839_8	8.22\|3096907\|36\|CP032839\|CRISPRCasFinder	3096907-3096942	36	MK804891	Aeromonas phage 2_D05, complete genome	13127-13162	4	0.889
CP032839_8	8.3\|3095663\|26\|CP032839\|CRISPRCasFinder	3095663-3095688	26	NC_011881	Pseudarthrobacter chlorophenolicus A6 plasmid pACHL02, complete sequence	150058-150083	5	0.808
CP032839_8	8.24\|3097038\|37\|CP032839\|CRISPRCasFinder	3097038-3097074	37	DQ674738	Aeromonas phage phiO18P, complete genome	33810-33846	5	0.865
CP032839_8	8.118\|3096901\|42\|CP032839\|PILER-CR	3096901-3096942	42	KY290953	Aeromonas phage 51, complete genome	13919-13960	5	0.881
CP032839_8	8.118\|3096901\|42\|CP032839\|PILER-CR	3096901-3096942	42	MK813942	Aeromonas phage 4_4512, complete genome	857-898	5	0.881
CP032839_8	8.118\|3096901\|42\|CP032839\|PILER-CR	3096901-3096942	42	MK804892	Aeromonas phage 4_D05, complete genome	13670-13711	5	0.881
CP032839_8	8.118\|3096901\|42\|CP032839\|PILER-CR	3096901-3096942	42	NC_019527	Aeromonas phage vB_AsaM-56, complete genome	13919-13960	5	0.881
CP032839_8	8.118\|3096901\|42\|CP032839\|PILER-CR	3096901-3096942	42	KY290954	Aeromonas phage 56, complete genome	13919-13960	5	0.881
CP032839_8	8.118\|3096901\|42\|CP032839\|PILER-CR	3096901-3096942	42	MK804891	Aeromonas phage 2_D05, complete genome	13121-13162	6	0.857
CP032839_8	8.125\|3097348\|39\|CP032839\|PILER-CR	3097348-3097386	39	KY290953	Aeromonas phage 51, complete genome	14095-14133	6	0.846
CP032839_8	8.125\|3097348\|39\|CP032839\|PILER-CR	3097348-3097386	39	NC_019527	Aeromonas phage vB_AsaM-56, complete genome	14095-14133	6	0.846
CP032839_8	8.125\|3097348\|39\|CP032839\|PILER-CR	3097348-3097386	39	KY290954	Aeromonas phage 56, complete genome	14095-14133	6	0.846
CP032839_8	8.7\|3095916\|37\|CP032839\|CRISPRCasFinder	3095916-3095952	37	NC_009236	Burkholderia phage phiE12-2 chromosome, complete genome	3553-3589	7	0.811
CP032839_8	8.7\|3095916\|37\|CP032839\|CRISPRCasFinder	3095916-3095952	37	DQ087285	Burkholderia pseudomallei phage phi52237, complete genome	3510-3546	7	0.811
CP032839_8	8.7\|3095916\|37\|CP032839\|CRISPRCasFinder	3095916-3095952	37	CP000624	Burkholderia phage phiE12-2, complete genome	3553-3589	7	0.811
CP032839_8	8.7\|3095916\|37\|CP032839\|CRISPRCasFinder	3095916-3095952	37	NC_007145	Burkholderia prophage phi52237, complete genome	3510-3546	7	0.811
CP032839_8	8.7\|3095916\|37\|CP032839\|CRISPRCasFinder	3095916-3095952	37	JX681814	Burkholderia phage phiX216, complete genome	3000-3036	7	0.811
CP032839_8	8.7\|3095916\|37\|CP032839\|CRISPRCasFinder	3095916-3095952	37	CP008753	Burkholderia phage BEK, complete genome	34541-34577	7	0.811
CP032839_8	8.27\|3097229\|33\|CP032839\|CRISPRCasFinder	3097229-3097261	33	KX397373	Erwinia phage vB_EamM_Stratton, complete genome	56302-56334	7	0.788
CP032839_8	8.27\|3097229\|33\|CP032839\|CRISPRCasFinder	3097229-3097261	33	NC_031107	Erwinia phage vB_EamM_Asesino, complete genome	55778-55810	7	0.788
CP032839_8	8.27\|3097229\|33\|CP032839\|CRISPRCasFinder	3097229-3097261	33	JX316028	Erwinia phage phiEaH2, complete genome	222167-222199	7	0.788
CP032839_8	8.31\|3097479\|34\|CP032839\|CRISPRCasFinder	3097479-3097512	34	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	1079186-1079219	7	0.794
CP032839_8	8.40\|3098047\|35\|CP032839\|CRISPRCasFinder	3098047-3098081	35	MK542015	Escherichia phage ZCEC5, complete genome	5529-5563	7	0.8
CP032839_8	8.4\|3095718\|36\|CP032839\|CRISPRCasFinder	3095718-3095753	36	NZ_CP026561	Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p4_tig6, complete sequence	37204-37239	8	0.778
CP032839_8	8.25\|3097104\|34\|CP032839\|CRISPRCasFinder	3097104-3097137	34	NZ_CP049159	Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence	721608-721641	8	0.765
CP032839_8	8.25\|3097104\|34\|CP032839\|CRISPRCasFinder	3097104-3097137	34	NZ_CP049319	Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence	461532-461565	8	0.765
CP032839_8	8.34\|3097670\|34\|CP032839\|CRISPRCasFinder	3097670-3097703	34	NZ_CP013053	Sinorhizobium americanum CCGM7 plasmid B, complete sequence	204107-204140	8	0.765
CP032839_8	8.40\|3098047\|35\|CP032839\|CRISPRCasFinder	3098047-3098081	35	NZ_CP011159	Moraxella ovis strain 199/55 plasmid pMOV1, complete sequence	1576-1610	8	0.771
CP032839_8	8.40\|3098047\|35\|CP032839\|CRISPRCasFinder	3098047-3098081	35	NZ_CP018060	Moraxella catarrhalis strain CCRI-195ME plasmid unnamed, complete sequence	2657-2691	8	0.771
CP032839_8	8.75\|3096897\|46\|CP032839\|CRT	3096897-3096942	46	KY290953	Aeromonas phage 51, complete genome	13915-13960	8	0.826
CP032839_8	8.75\|3096897\|46\|CP032839\|CRT	3096897-3096942	46	MK813942	Aeromonas phage 4_4512, complete genome	853-898	8	0.826
CP032839_8	8.75\|3096897\|46\|CP032839\|CRT	3096897-3096942	46	MK804892	Aeromonas phage 4_D05, complete genome	13666-13711	8	0.826
CP032839_8	8.75\|3096897\|46\|CP032839\|CRT	3096897-3096942	46	NC_019527	Aeromonas phage vB_AsaM-56, complete genome	13915-13960	8	0.826
CP032839_8	8.75\|3096897\|46\|CP032839\|CRT	3096897-3096942	46	KY290954	Aeromonas phage 56, complete genome	13915-13960	8	0.826
CP032839_8	8.142\|3098587\|35\|CP032839\|PILER-CR	3098587-3098621	35	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	86762-86796	8	0.771
CP032839_8	8.9\|3096048\|35\|CP032839\|CRISPRCasFinder	3096048-3096082	35	NC_021978	Acetobacter pasteurianus 386B plasmid Apa386Bp6, complete sequence	6246-6280	9	0.743
CP032839_8	8.25\|3097104\|34\|CP032839\|CRISPRCasFinder	3097104-3097137	34	NZ_CP025015	Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence	131666-131699	9	0.735
CP032839_8	8.25\|3097104\|34\|CP032839\|CRISPRCasFinder	3097104-3097137	34	NC_012521	Rhodococcus opacus B4 plasmid pROB02, complete sequence	238501-238534	9	0.735
CP032839_8	8.27\|3097229\|33\|CP032839\|CRISPRCasFinder	3097229-3097261	33	NZ_LN614828	Legionella fallonii LLAP-10 plasmid II, complete sequence	44633-44665	9	0.727
CP032839_8	8.36\|3097795\|34\|CP032839\|CRISPRCasFinder	3097795-3097828	34	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1482117-1482150	9	0.735
CP032839_8	8.75\|3096897\|46\|CP032839\|CRT	3096897-3096942	46	MK804891	Aeromonas phage 2_D05, complete genome	13117-13162	9	0.804
CP032839_8	8.82\|3097344\|43\|CP032839\|CRT	3097344-3097386	43	KY290953	Aeromonas phage 51, complete genome	14095-14137	9	0.791
CP032839_8	8.82\|3097344\|43\|CP032839\|CRT	3097344-3097386	43	NC_019527	Aeromonas phage vB_AsaM-56, complete genome	14095-14137	9	0.791
CP032839_8	8.82\|3097344\|43\|CP032839\|CRT	3097344-3097386	43	KY290954	Aeromonas phage 56, complete genome	14095-14137	9	0.791
CP032839_8	8.120\|3097032\|43\|CP032839\|PILER-CR	3097032-3097074	43	DQ674738	Aeromonas phage phiO18P, complete genome	33810-33852	9	0.791
CP032839_8	8.36\|3097795\|34\|CP032839\|CRISPRCasFinder	3097795-3097828	34	NC_004319	Corynebacterium efficiens YS-314 plasmid pCE2, complete sequence	12065-12098	10	0.706
CP032839_8	8.36\|3097795\|34\|CP032839\|CRISPRCasFinder	3097795-3097828	34	NZ_CP019083	Paludisphaera borealis strain PX4 plasmid PALBO1, complete sequence	71275-71308	10	0.706
CP032839_8	8.48\|3098577\|38\|CP032839\|CRISPRCasFinder	3098577-3098614	38	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	86762-86799	10	0.737
CP032839_8	8.60\|3095906\|47\|CP032839\|CRT	3095906-3095952	47	NC_049453	Klebsiella phage ST13-OXA48phi12.1, complete genome	26717-26763	11	0.766
CP032839_8	8.137\|3098249\|34\|CP032839\|PILER-CR	3098249-3098282	34	NZ_CP033461	Brevibacillus laterosporus strain 1821L plasmid p1821L01, complete sequence	87067-87100	11	0.676
CP032839_8	8.137\|3098249\|34\|CP032839\|PILER-CR	3098249-3098282	34	NZ_CP032411	Brevibacillus laterosporus strain E7593-50 plasmid pAZOBL1, complete sequence	59579-59612	11	0.676
CP032839_8	8.110\|3095905\|48\|CP032839\|PILER-CR	3095905-3095952	48	NC_049453	Klebsiella phage ST13-OXA48phi12.1, complete genome	26716-26763	13	0.729

1. spacer 8.29|3097354|33|CP032839|CRISPRCasFinder matches to KY290953 (Aeromonas phage 51, complete genome) position: , mismatch: 2, identity: 0.939

cataatcacagcggcagggctcaggctatccat	CRISPR spacer
catgatcacagcggcaggactcaggctatccat	Protospacer
***.**************.**************

2. spacer 8.29|3097354|33|CP032839|CRISPRCasFinder matches to NC_019527 (Aeromonas phage vB_AsaM-56, complete genome) position: , mismatch: 2, identity: 0.939

cataatcacagcggcagggctcaggctatccat	CRISPR spacer
catgatcacagcggcaggactcaggctatccat	Protospacer
***.**************.**************

3. spacer 8.29|3097354|33|CP032839|CRISPRCasFinder matches to KY290954 (Aeromonas phage 56, complete genome) position: , mismatch: 2, identity: 0.939

cataatcacagcggcagggctcaggctatccat	CRISPR spacer
catgatcacagcggcaggactcaggctatccat	Protospacer
***.**************.**************

4. spacer 8.19|3096708|38|CP032839|CRISPRCasFinder matches to NZ_CP047377 (Aeromonas salmonicida subsp. salmonicida strain J410 plasmid p1AsJ410, complete sequence) position: , mismatch: 3, identity: 0.921

gacatgcgcgaggaggtctatctgcgggccgctatcac	CRISPR spacer
cagatgcgtgaggaggtctatctgcgggccgctatcac	Protospacer
 * *****.*****************************

5. spacer 8.19|3096708|38|CP032839|CRISPRCasFinder matches to NZ_CP048224 (Aeromonas salmonicida subsp. salmonicida strain J223 plasmid pASal5, complete sequence) position: , mismatch: 3, identity: 0.921

gacatgcgcgaggaggtctatctgcgggccgctatcac	CRISPR spacer
cagatgcgcgatgaggtctatctgcgggccgctatcac	Protospacer
 * ******** **************************

6. spacer 8.19|3096708|38|CP032839|CRISPRCasFinder matches to NZ_CP047375 (Aeromonas salmonicida subsp. salmonicida strain J409 plasmid p1AsJ409, complete sequence) position: , mismatch: 3, identity: 0.921

gacatgcgcgaggaggtctatctgcgggccgctatcac	CRISPR spacer
cagatgcgtgaggaggtctatctgcgggccgctatcac	Protospacer
 * *****.*****************************

7. spacer 8.19|3096708|38|CP032839|CRISPRCasFinder matches to NC_009350 (Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.921

gacatgcgcgaggaggtctatctgcgggccgctatcac	CRISPR spacer
cagatgcgcgatgaggtctatctgcgggccgctatcac	Protospacer
 * ******** **************************

8. spacer 8.19|3096708|38|CP032839|CRISPRCasFinder matches to NZ_CP038103 (Aeromonas salmonicida subsp. salmonicida strain SHY16-3432 plasmid pAsa5-3432, complete sequence) position: , mismatch: 3, identity: 0.921

gacatgcgcgaggaggtctatctgcgggccgctatcac	CRISPR spacer
cagatgcgcgatgaggtctatctgcgggccgctatcac	Protospacer
 * ******** **************************

9. spacer 8.19|3096708|38|CP032839|CRISPRCasFinder matches to NZ_KY555069 (Aeromonas salmonicida subsp. salmonicida strain 01-B526 plasmid pAsa5, complete sequence) position: , mismatch: 3, identity: 0.921

gacatgcgcgaggaggtctatctgcgggccgctatcac	CRISPR spacer
cagatgcgcgatgaggtctatctgcgggccgctatcac	Protospacer
 * ******** **************************

10. spacer 8.19|3096708|38|CP032839|CRISPRCasFinder matches to CP052035 (Aeromonas salmonicida subsp. salmonicida strain J411 plasmid p1AsJ411, complete sequence) position: , mismatch: 3, identity: 0.921

gacatgcgcgaggaggtctatctgcgggccgctatcac	CRISPR spacer
cagatgcgtgaggaggtctatctgcgggccgctatcac	Protospacer
 * *****.*****************************

11. spacer 8.19|3096708|38|CP032839|CRISPRCasFinder matches to CP052035 (Aeromonas salmonicida subsp. salmonicida strain J411 plasmid p1AsJ411, complete sequence) position: , mismatch: 3, identity: 0.921

gacatgcgcgaggaggtctatctgcgggccgctatcac	CRISPR spacer
cagatgcgtgaggaggtctatctgcgggccgctatcac	Protospacer
 * *****.*****************************

12. spacer 8.22|3096907|36|CP032839|CRISPRCasFinder matches to KY290953 (Aeromonas phage 51, complete genome) position: , mismatch: 3, identity: 0.917

gaccactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
cgacactgccgtttcgtgaattcaagacggagagag	Protospacer
 . *********************************

13. spacer 8.22|3096907|36|CP032839|CRISPRCasFinder matches to MK813942 (Aeromonas phage 4_4512, complete genome) position: , mismatch: 3, identity: 0.917

gaccactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
cgacactgccgtttcgtgaattcaagacggagagag	Protospacer
 . *********************************

14. spacer 8.22|3096907|36|CP032839|CRISPRCasFinder matches to MK804892 (Aeromonas phage 4_D05, complete genome) position: , mismatch: 3, identity: 0.917

gaccactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
cgacactgccgtttcgtgaattcaagacggagagag	Protospacer
 . *********************************

15. spacer 8.22|3096907|36|CP032839|CRISPRCasFinder matches to NC_019527 (Aeromonas phage vB_AsaM-56, complete genome) position: , mismatch: 3, identity: 0.917

gaccactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
cgacactgccgtttcgtgaattcaagacggagagag	Protospacer
 . *********************************

16. spacer 8.22|3096907|36|CP032839|CRISPRCasFinder matches to KY290954 (Aeromonas phage 56, complete genome) position: , mismatch: 3, identity: 0.917

gaccactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
cgacactgccgtttcgtgaattcaagacggagagag	Protospacer
 . *********************************

17. spacer 8.7|3095916|37|CP032839|CRISPRCasFinder matches to NC_049453 (Klebsiella phage ST13-OXA48phi12.1, complete genome) position: , mismatch: 4, identity: 0.892

gactccgcaaggtggcctccggtatggcgatgcacaa	CRISPR spacer
agctgcgcaaggtggcctccggtatggcgctgcacaa	Protospacer
..** ************************ *******

18. spacer 8.17|3096572|41|CP032839|CRISPRCasFinder matches to NZ_CP048224 (Aeromonas salmonicida subsp. salmonicida strain J223 plasmid pASal5, complete sequence) position: , mismatch: 4, identity: 0.902

gatctggtgatcataccaacagggccgccctggtgttcacg	CRISPR spacer
ctcctggtgatcataccagcagggccgccctggtgttcacg	Protospacer
  .***************.**********************

19. spacer 8.17|3096572|41|CP032839|CRISPRCasFinder matches to NC_009350 (Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.902

gatctggtgatcataccaacagggccgccctggtgttcacg	CRISPR spacer
ctcctggtgatcataccagcagggccgccctggtgttcacg	Protospacer
  .***************.**********************

20. spacer 8.17|3096572|41|CP032839|CRISPRCasFinder matches to NZ_CP038103 (Aeromonas salmonicida subsp. salmonicida strain SHY16-3432 plasmid pAsa5-3432, complete sequence) position: , mismatch: 4, identity: 0.902

gatctggtgatcataccaacagggccgccctggtgttcacg	CRISPR spacer
ctcctggtgatcataccagcagggccgccctggtgttcacg	Protospacer
  .***************.**********************

21. spacer 8.17|3096572|41|CP032839|CRISPRCasFinder matches to NZ_KY555069 (Aeromonas salmonicida subsp. salmonicida strain 01-B526 plasmid pAsa5, complete sequence) position: , mismatch: 4, identity: 0.902

gatctggtgatcataccaacagggccgccctggtgttcacg	CRISPR spacer
ctcctggtgatcataccagcagggccgccctggtgttcacg	Protospacer
  .***************.**********************

22. spacer 8.22|3096907|36|CP032839|CRISPRCasFinder matches to MK804891 (Aeromonas phage 2_D05, complete genome) position: , mismatch: 4, identity: 0.889

gaccactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
cgacactaccgtttcgtgaattcaagacggagagag	Protospacer
 . ****.****************************

23. spacer 8.3|3095663|26|CP032839|CRISPRCasFinder matches to NC_011881 (Pseudarthrobacter chlorophenolicus A6 plasmid pACHL02, complete sequence) position: , mismatch: 5, identity: 0.808

gacacatccccgcgcctcttcgtcga	CRISPR spacer
cacacatccctgcgcttcttcgtccc	Protospacer
 *********.****.********

24. spacer 8.24|3097038|37|CP032839|CRISPRCasFinder matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 5, identity: 0.865

gacctggccatgctcaggcgctgtcaggcagatagaa	CRISPR spacer
tccctggccatgttcaggcgctgtcaggcagataaga	Protospacer
  **********.*********************..*

25. spacer 8.118|3096901|42|CP032839|PILER-CR matches to KY290953 (Aeromonas phage 51, complete genome) position: , mismatch: 5, identity: 0.881

-gggcgcgaccactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
acgatacga-cactgccgtttcgtgaattcaagacggagagag	Protospacer
  *...*** *********************************

26. spacer 8.118|3096901|42|CP032839|PILER-CR matches to MK813942 (Aeromonas phage 4_4512, complete genome) position: , mismatch: 5, identity: 0.881

-gggcgcgaccactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
acgatacga-cactgccgtttcgtgaattcaagacggagagag	Protospacer
  *...*** *********************************

27. spacer 8.118|3096901|42|CP032839|PILER-CR matches to MK804892 (Aeromonas phage 4_D05, complete genome) position: , mismatch: 5, identity: 0.881

-gggcgcgaccactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
acgatacga-cactgccgtttcgtgaattcaagacggagagag	Protospacer
  *...*** *********************************

28. spacer 8.118|3096901|42|CP032839|PILER-CR matches to NC_019527 (Aeromonas phage vB_AsaM-56, complete genome) position: , mismatch: 5, identity: 0.881

-gggcgcgaccactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
acgatacga-cactgccgtttcgtgaattcaagacggagagag	Protospacer
  *...*** *********************************

29. spacer 8.118|3096901|42|CP032839|PILER-CR matches to KY290954 (Aeromonas phage 56, complete genome) position: , mismatch: 5, identity: 0.881

-gggcgcgaccactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
acgatacga-cactgccgtttcgtgaattcaagacggagagag	Protospacer
  *...*** *********************************

30. spacer 8.118|3096901|42|CP032839|PILER-CR matches to MK804891 (Aeromonas phage 2_D05, complete genome) position: , mismatch: 6, identity: 0.857

-gggcgcgaccactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
acgatacga-cactaccgtttcgtgaattcaagacggagagag	Protospacer
  *...*** ****.****************************

31. spacer 8.125|3097348|39|CP032839|PILER-CR matches to KY290953 (Aeromonas phage 51, complete genome) position: , mismatch: 6, identity: 0.846

cgcgaccataatcacagcggcagggctcaggctatccat	CRISPR spacer
ttcaagcatgatcacagcggcaggactcaggctatccat	Protospacer
. *.* ***.**************.**************

32. spacer 8.125|3097348|39|CP032839|PILER-CR matches to NC_019527 (Aeromonas phage vB_AsaM-56, complete genome) position: , mismatch: 6, identity: 0.846

cgcgaccataatcacagcggcagggctcaggctatccat	CRISPR spacer
ttcaagcatgatcacagcggcaggactcaggctatccat	Protospacer
. *.* ***.**************.**************

33. spacer 8.125|3097348|39|CP032839|PILER-CR matches to KY290954 (Aeromonas phage 56, complete genome) position: , mismatch: 6, identity: 0.846

cgcgaccataatcacagcggcagggctcaggctatccat	CRISPR spacer
ttcaagcatgatcacagcggcaggactcaggctatccat	Protospacer
. *.* ***.**************.**************

34. spacer 8.7|3095916|37|CP032839|CRISPRCasFinder matches to NC_009236 (Burkholderia phage phiE12-2 chromosome, complete genome) position: , mismatch: 7, identity: 0.811

gactccgcaaggtggcctccggtatggcgatgcacaa	CRISPR spacer
agctgaacaaggtcgcctccggcatggcgatgcacaa	Protospacer
..**  .****** ********.**************

35. spacer 8.7|3095916|37|CP032839|CRISPRCasFinder matches to DQ087285 (Burkholderia pseudomallei phage phi52237, complete genome) position: , mismatch: 7, identity: 0.811

gactccgcaaggtggcctccggtatggcgatgcacaa	CRISPR spacer
agctgaacaaggtcgcctccggcatggcgatgcacaa	Protospacer
..**  .****** ********.**************

36. spacer 8.7|3095916|37|CP032839|CRISPRCasFinder matches to CP000624 (Burkholderia phage phiE12-2, complete genome) position: , mismatch: 7, identity: 0.811

gactccgcaaggtggcctccggtatggcgatgcacaa	CRISPR spacer
agctgaacaaggtcgcctccggcatggcgatgcacaa	Protospacer
..**  .****** ********.**************

37. spacer 8.7|3095916|37|CP032839|CRISPRCasFinder matches to NC_007145 (Burkholderia prophage phi52237, complete genome) position: , mismatch: 7, identity: 0.811

gactccgcaaggtggcctccggtatggcgatgcacaa	CRISPR spacer
agctgaacaaggtcgcctccggcatggcgatgcacaa	Protospacer
..**  .****** ********.**************

38. spacer 8.7|3095916|37|CP032839|CRISPRCasFinder matches to JX681814 (Burkholderia phage phiX216, complete genome) position: , mismatch: 7, identity: 0.811

gactccgcaaggtggcctccggtatggcgatgcacaa	CRISPR spacer
agctgaacaaggtcgcctccggcatggcgatgcacaa	Protospacer
..**  .****** ********.**************

39. spacer 8.7|3095916|37|CP032839|CRISPRCasFinder matches to CP008753 (Burkholderia phage BEK, complete genome) position: , mismatch: 7, identity: 0.811

gactccgcaaggtggcctccggtatggcgatgcacaa	CRISPR spacer
agctgaacaaggtcgcctccggcatggcgatgcacaa	Protospacer
..**  .****** ********.**************

40. spacer 8.27|3097229|33|CP032839|CRISPRCasFinder matches to KX397373 (Erwinia phage vB_EamM_Stratton, complete genome) position: , mismatch: 7, identity: 0.788

tcagctcagaaagcggcttttgcgc-agatagtc	CRISPR spacer
gcagctgagaaagcggcttctgcgctggataaa-	Protospacer
 ***** ************.***** .****.

41. spacer 8.27|3097229|33|CP032839|CRISPRCasFinder matches to NC_031107 (Erwinia phage vB_EamM_Asesino, complete genome) position: , mismatch: 7, identity: 0.788

tcagctcagaaagcggcttttgcgc-agatagtc	CRISPR spacer
gcagctgagaaagcggcttctgcgctggataaa-	Protospacer
 ***** ************.***** .****.

42. spacer 8.27|3097229|33|CP032839|CRISPRCasFinder matches to JX316028 (Erwinia phage phiEaH2, complete genome) position: , mismatch: 7, identity: 0.788

tcagctcagaaagcggcttttgcgc-agatagtc	CRISPR spacer
gcagctgagaaagcggcttctgcgctggataaa-	Protospacer
 ***** ************.***** .****.

43. spacer 8.31|3097479|34|CP032839|CRISPRCasFinder matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

tggtggccatcgagcgcgaagtctcgat-gtatca	CRISPR spacer
tgccggccaacgagcgcgatgtctcgatggtgtt-	Protospacer
** .***** ********* ******** **.*.

44. spacer 8.40|3098047|35|CP032839|CRISPRCasFinder matches to MK542015 (Escherichia phage ZCEC5, complete genome) position: , mismatch: 7, identity: 0.8

gcgccagttgataatgctctctgcgctgtacgcca	CRISPR spacer
gcgccagttgataatgttctctgcggtgtagaatg	Protospacer
****************.******** **** . ..

45. spacer 8.4|3095718|36|CP032839|CRISPRCasFinder matches to NZ_CP026561 (Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p4_tig6, complete sequence) position: , mismatch: 8, identity: 0.778

gacctgtgctgccaaggtataggcgcgggtcatgtt	CRISPR spacer
ggccctaccggccaaggtgcaggcgcgggtcatgtt	Protospacer
*.**.   * ********..****************

46. spacer 8.25|3097104|34|CP032839|CRISPRCasFinder matches to NZ_CP049159 (Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence) position: , mismatch: 8, identity: 0.765

caaggctgtcgatatcgtcatcgtca---tggggcag	CRISPR spacer
aaagcctgtcgatgtcgtcatcgtcggtttcggg---	Protospacer
 *** ********.***********.   * ***

47. spacer 8.25|3097104|34|CP032839|CRISPRCasFinder matches to NZ_CP049319 (Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence) position: , mismatch: 8, identity: 0.765

caaggctgtcgatatcgtcatcgtca---tggggcag	CRISPR spacer
aaagcctgtcgatgtcgtcatcgtcggtttcggg---	Protospacer
 *** ********.***********.   * ***

48. spacer 8.34|3097670|34|CP032839|CRISPRCasFinder matches to NZ_CP013053 (Sinorhizobium americanum CCGM7 plasmid B, complete sequence) position: , mismatch: 8, identity: 0.765

ccgtggcaacttcagcatgcgcgatcggg-catca	CRISPR spacer
tggcggcaactgcagcatgggcgatcgggacagt-	Protospacer
. *.******* ******* ********* ** .

49. spacer 8.40|3098047|35|CP032839|CRISPRCasFinder matches to NZ_CP011159 (Moraxella ovis strain 199/55 plasmid pMOV1, complete sequence) position: , mismatch: 8, identity: 0.771

gcgccagttgataatgctctctgcgctgtacgcca	CRISPR spacer
ccgccagttgataatgctctctgagcagctggcgc	Protospacer
 ********************** ** *.  **

50. spacer 8.40|3098047|35|CP032839|CRISPRCasFinder matches to NZ_CP018060 (Moraxella catarrhalis strain CCRI-195ME plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.771

gcgccagttgataatgctctctgcgctgtacgcca	CRISPR spacer
ccgccagttgataatgctctctgagcagctggcgc	Protospacer
 ********************** ** *.  **

51. spacer 8.75|3096897|46|CP032839|CRT matches to KY290953 (Aeromonas phage 51, complete genome) position: , mismatch: 8, identity: 0.826

cagggggcgcgac----cactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
----tgccacgatacgacactgccgtttcgtgaattcaagacggagagag	Protospacer
     * *.***.    *********************************

52. spacer 8.75|3096897|46|CP032839|CRT matches to MK813942 (Aeromonas phage 4_4512, complete genome) position: , mismatch: 8, identity: 0.826

cagggggcgcgac----cactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
----tgtcacgatacgacactgccgtttcgtgaattcaagacggagagag	Protospacer
     * *.***.    *********************************

53. spacer 8.75|3096897|46|CP032839|CRT matches to MK804892 (Aeromonas phage 4_D05, complete genome) position: , mismatch: 8, identity: 0.826

cagggggcgcgac----cactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
----tgccacgatacgacactgccgtttcgtgaattcaagacggagagag	Protospacer
     * *.***.    *********************************

54. spacer 8.75|3096897|46|CP032839|CRT matches to NC_019527 (Aeromonas phage vB_AsaM-56, complete genome) position: , mismatch: 8, identity: 0.826

cagggggcgcgac----cactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
----tgccacgatacgacactgccgtttcgtgaattcaagacggagagag	Protospacer
     * *.***.    *********************************

55. spacer 8.75|3096897|46|CP032839|CRT matches to KY290954 (Aeromonas phage 56, complete genome) position: , mismatch: 8, identity: 0.826

cagggggcgcgac----cactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
----tgccacgatacgacactgccgtttcgtgaattcaagacggagagag	Protospacer
     * *.***.    *********************************

56. spacer 8.142|3098587|35|CP032839|PILER-CR matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.771

atagtctcgcccttgatgctgccgctgccaaaatc	CRISPR spacer
tcggtgtcgccctggatgctgccgctgccaacctt	Protospacer
 ..** ******* *****************  *.

57. spacer 8.9|3096048|35|CP032839|CRISPRCasFinder matches to NC_021978 (Acetobacter pasteurianus 386B plasmid Apa386Bp6, complete sequence) position: , mismatch: 9, identity: 0.743

accagagtgaaattaaacgctttgacgatgaaggc	CRISPR spacer
aaaaggctgaaattaaacgcgttgaagatgaaatt	Protospacer
*  **. ************* **** ******. .

58. spacer 8.25|3097104|34|CP032839|CRISPRCasFinder matches to NZ_CP025015 (Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence) position: , mismatch: 9, identity: 0.735

caaggctgtcgatatcgtcatcgtcatggggcag	CRISPR spacer
gcagggtgtcgatatcctcatcgtcatcgaagat	Protospacer
  *** ********** ********** *.. *

59. spacer 8.25|3097104|34|CP032839|CRISPRCasFinder matches to NC_012521 (Rhodococcus opacus B4 plasmid pROB02, complete sequence) position: , mismatch: 9, identity: 0.735

caaggctgtcgatatcgtcatcgtcatggggcag	CRISPR spacer
caaggacgtcgatatcgtcatcgtcctcaaagac	Protospacer
***** .****************** * ... *

60. spacer 8.27|3097229|33|CP032839|CRISPRCasFinder matches to NZ_LN614828 (Legionella fallonii LLAP-10 plasmid II, complete sequence) position: , mismatch: 9, identity: 0.727

tcagctcagaaagcggcttttgcgcagatagtc	CRISPR spacer
tcggctcagaaagaggcttttgcggcagtttta	Protospacer
**.********** **********  ..*  *

61. spacer 8.36|3097795|34|CP032839|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 9, identity: 0.735

tgcgcgatatcgcgatcggcctgagcctgagcct	CRISPR spacer
aggccgacatcgccatcggcctgagcctgccgcc	Protospacer
 *  ***.***** ***************   *.

62. spacer 8.75|3096897|46|CP032839|CRT matches to MK804891 (Aeromonas phage 2_D05, complete genome) position: , mismatch: 9, identity: 0.804

cagggggcgcgac----cactgccgtttcgtgaattcaagacggagagag	CRISPR spacer
----tgccacgatacgacactaccgtttcgtgaattcaagacggagagag	Protospacer
     * *.***.    ****.****************************

63. spacer 8.82|3097344|43|CP032839|CRT matches to KY290953 (Aeromonas phage 51, complete genome) position: , mismatch: 9, identity: 0.791

caggcgcgaccataatcacagcggcagggctcaggctatccat	CRISPR spacer
gatcttcaagcatgatcacagcggcaggactcaggctatccat	Protospacer
 *  . *.* ***.**************.**************

64. spacer 8.82|3097344|43|CP032839|CRT matches to NC_019527 (Aeromonas phage vB_AsaM-56, complete genome) position: , mismatch: 9, identity: 0.791

caggcgcgaccataatcacagcggcagggctcaggctatccat	CRISPR spacer
gatcttcaagcatgatcacagcggcaggactcaggctatccat	Protospacer
 *  . *.* ***.**************.**************

65. spacer 8.82|3097344|43|CP032839|CRT matches to KY290954 (Aeromonas phage 56, complete genome) position: , mismatch: 9, identity: 0.791

caggcgcgaccataatcacagcggcagggctcaggctatccat	CRISPR spacer
gatcttcaagcatgatcacagcggcaggactcaggctatccat	Protospacer
 *  . *.* ***.**************.**************

66. spacer 8.120|3097032|43|CP032839|PILER-CR matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 9, identity: 0.791

gggcgcg---acctggccatgctcaggcgctgtcaggcagatagaa	CRISPR spacer
---cacatttccctggccatgttcaggcgctgtcaggcagataaga	Protospacer
   *.*.    **********.*********************..*

67. spacer 8.36|3097795|34|CP032839|CRISPRCasFinder matches to NC_004319 (Corynebacterium efficiens YS-314 plasmid pCE2, complete sequence) position: , mismatch: 10, identity: 0.706

tgcgcgatatcgcgatcggcctgagcctgagcct	CRISPR spacer
gaaatcacatcgcgttctgcctgagcctgagcca	Protospacer
 . .. *.****** ** ***************

68. spacer 8.36|3097795|34|CP032839|CRISPRCasFinder matches to NZ_CP019083 (Paludisphaera borealis strain PX4 plasmid PALBO1, complete sequence) position: , mismatch: 10, identity: 0.706

tgcgcgatatcgcgatcggcctgagcctgagcct	CRISPR spacer
tcacggccggcgcgatcggcctggggctgagcct	Protospacer
*    * .. *************.* ********

69. spacer 8.48|3098577|38|CP032839|CRISPRCasFinder matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.737

gacatagtctcgcccttgatgctgccgctgccaaaatc	CRISPR spacer
gtgtcggtgtcgccctggatgctgccgctgccaacctt	Protospacer
*   ..** ******* *****************  *.

70. spacer 8.60|3095906|47|CP032839|CRT matches to NC_049453 (Klebsiella phage ST13-OXA48phi12.1, complete genome) position: , mismatch: 11, identity: 0.766

------cggagggcgcgactccgcaaggtggcctccggtatggcgatgcacaa	CRISPR spacer
aaattccaggag------ctgcgcaaggtggcctccggtatggcgctgcacaa	Protospacer
      *.*..*      ** ************************ *******

71. spacer 8.137|3098249|34|CP032839|PILER-CR matches to NZ_CP033461 (Brevibacillus laterosporus strain 1821L plasmid p1821L01, complete sequence) position: , mismatch: 11, identity: 0.676

tcgctgattttgctaactggttggataaacagta	CRISPR spacer
gaaaggatttagctaaatggttggataaaatatc	Protospacer
  .  ***** ***** ************  .*

72. spacer 8.137|3098249|34|CP032839|PILER-CR matches to NZ_CP032411 (Brevibacillus laterosporus strain E7593-50 plasmid pAZOBL1, complete sequence) position: , mismatch: 11, identity: 0.676

tcgctgattttgctaactggttggataaacagta	CRISPR spacer
gaaaagatttagctaaatggttggataaaatatc	Protospacer
  .  ***** ***** ************  .*

73. spacer 8.110|3095905|48|CP032839|PILER-CR matches to NC_049453 (Klebsiella phage ST13-OXA48phi12.1, complete genome) position: , mismatch: 13, identity: 0.729

gcggagggcgcgactccgcaaggtggcctccggtatggcgatgcacaa	CRISPR spacer
gaaattccaggagctgcgcaaggtggcctccggtatggcgctgcacaa	Protospacer
* ..     * ..** ************************ *******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

461955 : 614599

116

Vibrio_phage(17.39%)

protease,transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYK16879.1\|461955_464217_+\|protease	serine protease	A0A1V0SFX9	Hokovirus	1.7e-05	27.1
AYK20157.1\|464446_467044_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
AYK16880.1\|467324_468911_+	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
AYK16881.1\|469074_470469_+	FAD-binding protein	NA	NA	NA	NA
AYK20158.1\|470487_471606_+	GTP-binding protein	NA	NA	NA	NA
AYK16882.1\|474693_475794_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AYK16883.1\|475884_476493_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AYK16884.1\|477892_478381_-	DNA-binding protein	NA	NA	NA	NA
AYK16885.1\|478507_479017_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
AYK16886.1\|479016_479388_-	dihydroneopterin aldolase	NA	NA	NA	NA
AYK20159.1\|479479_480208_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
AYK16887.1\|480727_481900_+	hypothetical protein	NA	NA	NA	NA
AYK16888.1\|481986_482319_-	hypothetical protein	NA	NA	NA	NA
AYK16889.1\|482452_482968_+	DfsB family protein	NA	NA	NA	NA
AYK16890.1\|483213_483669_+	hypothetical protein	NA	NA	NA	NA
AYK16891.1\|483744_485130_-	argininosuccinate lyase	NA	NA	NA	NA
AYK16892.1\|485545_486781_-	argininosuccinate synthase	NA	NA	NA	NA
AYK16893.1\|486849_487761_-	ornithine carbamoyltransferase	A7RB08	Paramecium_bursaria_Chlorella_virus	8.1e-15	29.3
AYK16894.1\|487786_488590_-	acetylglutamate kinase	NA	NA	NA	NA
AYK16895.1\|488612_489620_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
AYK16896.1\|489891_491037_+	acetylornithine deacetylase	NA	NA	NA	NA
AYK16897.1\|491268_493902_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AYK16898.1\|494006_494642_-	Vat family streptogramin A O-acetyltransferase	A0A1V0SJ47	Klosneuvirus	3.8e-19	37.6
AYK16899.1\|494665_494983_-	hypothetical protein	NA	NA	NA	NA
AYK16900.1\|495331_496222_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.2e-17	34.1
AYK16901.1\|496693_497968_+	HAAAP family serine/threonine permease	NA	NA	NA	NA
AYK16902.1\|498034_498742_-	exopolysaccharide biosynthesis protein	NA	NA	NA	NA
AYK20160.1\|498923_499547_+	porin family protein	NA	NA	NA	NA
AYK16903.1\|499637_500561_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	4.5e-13	34.0
AYK16904.1\|501066_502494_+	ammonium transporter	NA	NA	NA	NA
AYK16905.1\|502576_503044_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
AYK16906.1\|503141_503639_-	N-acetyltransferase	NA	NA	NA	NA
AYK20161.1\|503751_504156_-	nitrous oxide-stimulated promoter family protein	NA	NA	NA	NA
AYK16907.1\|504243_506046_-	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	5.9e-94	34.4
AYK16908.1\|506079_506745_-	GntR family transcriptional regulator	NA	NA	NA	NA
AYK16909.1\|506938_508564_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	1.4e-142	51.1
AYK16910.1\|508713_509601_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
AYK16911.1\|509675_510188_-	ribosome-associated heat shock protein Hsp15	NA	NA	NA	NA
AYK20162.1\|510329_510710_-	hypothetical protein	NA	NA	NA	NA
AYK16912.1\|510895_512284_+	phosphatase PAP2 family protein	NA	NA	NA	NA
AYK20163.1\|512286_513366_+	AI-2E family transporter YdiK	NA	NA	NA	NA
AYK16913.1\|513510_514050_-	hypothetical protein	NA	NA	NA	NA
AYK16914.1\|514068_514338_-	hypothetical protein	NA	NA	NA	NA
AYK16915.1\|514300_515317_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	2.2e-186	99.4
AYK16916.1\|515827_516964_+\|transposase	ISAs1-like element ISAs12 family transposase	NA	NA	NA	NA
AYK16917.1\|516980_517676_-	alpha/beta hydrolase	NA	NA	NA	NA
AYK20164.1\|518335_520237_+	PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR	NA	NA	NA	NA
AYK16918.1\|520331_521414_-	glycerol dehydrogenase	NA	NA	NA	NA
AYK16919.1\|522264_522894_-	dihydroxyacetone kinase subunit L	NA	NA	NA	NA
AYK16920.1\|522903_523974_-	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
AYK20165.1\|524212_525556_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	9.7e-150	68.7
AYK16921.1\|525876_526089_-	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	1.1e-23	78.6
AYK20166.1\|526684_526954_-	DUF3811 domain-containing protein	NA	NA	NA	NA
AYK16922.1\|527115_528018_-	cation transporter	NA	NA	NA	NA
AYK16923.1\|528482_528605_+	hypothetical protein	NA	NA	NA	NA
AYK16924.1\|529083_530505_-\|transposase	IS66-like element ISKpn15 family transposase	NA	NA	NA	NA
AYK16925.1\|531295_532213_+\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	2.8e-92	57.0
AYK16926.1\|533294_533486_-	hypothetical protein	NA	NA	NA	NA
AYK16927.1\|533506_534568_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AYK16928.1\|536863_538000_+\|transposase	ISAs1-like element ISAs12 family transposase	NA	NA	NA	NA
AYK16929.1\|538092_539133_+\|transposase	IS481 family transposase	E9P643	Wolbachia_endosymbiont_wVitB_of_Nasonia_vitripennis_phage	4.1e-71	41.5
AYK16930.1\|539705_541266_+\|transposase	IS3-like element ISAs20 family transposase	NA	NA	NA	NA
AYK16931.1\|542101_543268_-	bifunctional diguanylate cyclase/phosphodiesterase	NA	NA	NA	NA
AYK16932.1\|543280_544894_-\|transposase	IS1634-like element ISAs25 family transposase	NA	NA	NA	NA
AYK16933.1\|544924_545998_-	hypothetical protein	NA	NA	NA	NA
AYK16934.1\|546778_547141_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AYK16935.1\|547232_548794_-\|transposase	IS3-like element ISAs20 family transposase	NA	NA	NA	NA
AYK16936.1\|550081_551503_+\|transposase	IS66-like element ISKpn15 family transposase	NA	NA	NA	NA
AYK16937.1\|552707_553619_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	4.2e-88	54.8
AYK16938.1\|553946_556730_-	hypothetical protein	NA	NA	NA	NA
AYK16939.1\|556630_558192_-\|transposase	IS3-like element ISAs20 family transposase	NA	NA	NA	NA
AYK16940.1\|558234_559395_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
AYK16941.1\|559885_560758_+\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	3.2e-85	55.3
AYK16942.1\|560738_560993_-	hypothetical protein	NA	NA	NA	NA
AYK16943.1\|561153_561741_-	single-stranded DNA-binding protein	R9TR60	Vibrio_phage	5.7e-54	58.8
AYK16944.1\|562167_562815_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AYK16945.1\|562814_563258_+	CsgE	NA	NA	NA	NA
AYK16946.1\|563269_563671_+	curli production assembly protein CsgF	NA	NA	NA	NA
AYK16947.1\|563678_564518_+	curli production assembly/transport protein CsgG	M1ICK2	Pelagibacter_phage	2.1e-41	39.9
AYK16948.1\|564704_565226_+	curlin	NA	NA	NA	NA
AYK16949.1\|565260_566538_+	curlin	NA	NA	NA	NA
AYK16950.1\|566540_566939_+	hypothetical protein	NA	NA	NA	NA
AYK16951.1\|567028_569857_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	56.3
AYK16952.1\|569976_571650_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.4e-20	35.1
AYK16953.1\|572108_572723_+	outer membrane protein OmpW	NA	NA	NA	NA
AYK16954.1\|572945_574925_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	3.5e-23	32.9
AYK16955.1\|574933_576421_+	extracellular solute-binding protein	NA	NA	NA	NA
AYK16956.1\|576494_577295_-	N-acetyltransferase	NA	NA	NA	NA
AYK16957.1\|577624_578515_+	methylenetetrahydrofolate reductase	NA	NA	NA	NA
AYK16958.1\|578584_579649_-	DUF3103 family protein	NA	NA	NA	NA
AYK16959.1\|579771_580947_-	benzoate transporter BenE	NA	NA	NA	NA
AYK16960.1\|581066_581636_+	XRE family transcriptional regulator	NA	NA	NA	NA
AYK20167.1\|581652_582849_-	NnrS family protein	NA	NA	NA	NA
AYK16961.1\|589390_590140_+	DsbA family protein	NA	NA	NA	NA
AYK16962.1\|590436_591339_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
AYK16963.1\|591253_592069_-	hypothetical protein	NA	NA	NA	NA
AYK16964.1\|592286_593573_-	glutamate-1-semialdehyde-2,1-aminomutase	NA	NA	NA	NA
AYK16965.1\|593817_595206_+	H(+)/Cl(-) exchange transporter ClcA	NA	NA	NA	NA
AYK16966.1\|595297_595993_+	hypothetical protein	NA	NA	NA	NA
AYK16967.1\|596080_596431_+	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	1.8e-26	49.5
AYK16968.1\|596569_597979_-	Na+/H+ antiporter NhaC	NA	NA	NA	NA
AYK16969.1\|598280_598490_+	hypothetical protein	NA	NA	NA	NA
AYK16970.1\|598484_598838_-	hypothetical protein	NA	NA	NA	NA
AYK16971.1\|599635_601096_-	glycogen synthase GlgA	NA	NA	NA	NA
AYK16972.1\|601085_602303_-	glucose-1-phosphate adenylyltransferase	I7I009	Enterobacteria_phage	7.0e-06	25.6
AYK16973.1\|602454_603483_-	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA	NA	NA	NA
AYK16974.1\|603763_604636_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
AYK16975.1\|604727_605696_-	CYTH domain-containing protein	NA	NA	NA	NA
AYK16976.1\|605865_606546_+	TIGR00153 family protein	NA	NA	NA	NA
AYK16977.1\|606571_607837_+	inorganic phosphate transporter	M4QMY4	Ostreococcus_lucimarinus_virus	1.1e-62	37.2
AYK16978.1\|607947_609166_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.5e-16	29.2
AYK16979.1\|609254_611711_-	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA
AYK16980.1\|611710_612883_-	cystathionine gamma-synthase	NA	NA	NA	NA
AYK16981.1\|613088_613412_+	met regulon transcriptional regulator MetJ	NA	NA	NA	NA
AYK20168.1\|613453_614176_+	AraC family transcriptional regulator	NA	NA	NA	NA
AYK16982.1\|614260_614599_+\|tRNA	tRNA-binding protein	NA	NA	NA	NA

DBSCAN-SWA_2

1625500 : 1696847

Stx2-converting_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYK17771.1\|1625500_1626838_+\|transposase	IS4-like element ISAeme15 family transposase	NA	NA	NA	NA
AYK20221.1\|1627061_1627937_+	hypothetical protein	NA	NA	NA	NA
AYK17772.1\|1628082_1629273_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
AYK17773.1\|1629389_1629893_-	DUF2062 domain-containing protein	NA	NA	NA	NA
AYK20223.1\|1629886_1630405_-	DUF2062 domain-containing protein	NA	NA	NA	NA
AYK20222.1\|1630348_1632634_+	DNA internalization-related competence protein ComEC/Rec2	NA	NA	NA	NA
AYK17774.1\|1632738_1634502_+	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	2.2e-56	30.7
AYK17775.1\|1634501_1635497_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AYK17776.1\|1635620_1635809_+	Trm112 family protein	NA	NA	NA	NA
AYK17777.1\|1635805_1636555_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AYK17778.1\|1636767_1637412_+	two-component system response regulator UvrY	NA	NA	NA	NA
AYK17779.1\|1637539_1639393_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
AYK17780.1\|1639592_1640147_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
AYK17781.1\|1641061_1641637_-	hypothetical protein	NA	NA	NA	NA
AYK17782.1\|1642124_1643141_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	2.2e-186	99.4
AYK17783.1\|1643527_1644001_-	DUF2846 domain-containing protein	NA	NA	NA	NA
AYK17784.1\|1645292_1645469_-	DUF3606 domain-containing protein	NA	NA	NA	NA
AYK17785.1\|1645723_1646455_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
AYK17786.1\|1646451_1647249_-	DUF4269 domain-containing protein	NA	NA	NA	NA
AYK17787.1\|1647238_1647736_-	peptidylprolyl isomerase	NA	NA	NA	NA
AYK17788.1\|1650474_1651896_-\|transposase	IS66-like element ISKpn15 family transposase	NA	NA	NA	NA
AYK17789.1\|1652729_1655189_-	DEAD/DEAH box helicase	NA	NA	NA	NA
AYK17790.1\|1655868_1657290_+\|transposase	IS66-like element ISKpn15 family transposase	NA	NA	NA	NA
AYK17791.1\|1658552_1659308_-	hypothetical protein	NA	NA	NA	NA
AYK17792.1\|1659447_1660194_-	hypothetical protein	NA	NA	NA	NA
AYK17793.1\|1660324_1661071_-	hypothetical protein	NA	NA	NA	NA
AYK17794.1\|1661142_1661661_-	hypothetical protein	NA	NA	NA	NA
AYK17795.1\|1661657_1662662_-	DUF4401 domain-containing protein	NA	NA	NA	NA
AYK17796.1\|1662654_1663593_-	DUF2157 domain-containing protein	NA	NA	NA	NA
AYK17797.1\|1663757_1664315_-	TMEM165/GDT1 family protein	NA	NA	NA	NA
AYK17798.1\|1664574_1664904_-	translation initiation factor	NA	NA	NA	NA
AYK17799.1\|1665023_1665251_+	ferrous iron transport protein A	NA	NA	NA	NA
AYK17800.1\|1665380_1667651_+	Fe(2+) transporter permease subunit FeoB	NA	NA	NA	NA
AYK17801.1\|1667647_1667887_+	LuxR family transcriptional regulator	NA	NA	NA	NA
AYK17802.1\|1667986_1668637_-	DUF2913 family protein	NA	NA	NA	NA
AYK20224.1\|1668735_1669962_-	DEAD/DEAH box helicase	A0A1B1IS59	uncultured_Mediterranean_phage	2.1e-50	30.9
AYK17803.1\|1670317_1670896_+	O-methyltransferase	NA	NA	NA	NA
AYK17804.1\|1670971_1672387_-	glutamate synthase small subunit	NA	NA	NA	NA
AYK17805.1\|1672399_1676857_-	glutamate synthase large subunit	NA	NA	NA	NA
AYK17806.1\|1677039_1677255_-	hypothetical protein	NA	NA	NA	NA
AYK17807.1\|1678774_1680919_+	type I secretion system permease/ATPase	F2Y2R6	Organic_Lake_phycodnavirus	1.8e-25	34.6
AYK17808.1\|1680911_1682342_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
AYK17809.1\|1682379_1683696_+	channel protein TolC	NA	NA	NA	NA
AYK20225.1\|1683990_1684584_+	sulfate adenylyltransferase	NA	NA	NA	NA
AYK17810.1\|1684587_1686513_+	GGDEF domain-containing protein	NA	NA	NA	NA
AYK17811.1\|1686812_1687214_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	4.8e-12	39.4
AYK17812.1\|1687210_1687558_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	1.6e-56	89.6
AYK20226.1\|1687588_1689139_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.5e-244	80.4
AYK17813.1\|1689228_1695399_+	retention module-containing protein	NA	NA	NA	NA
AYK17814.1\|1695425_1696847_+\|transposase	IS66-like element ISKpn15 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1758365 : 1836112

Ostreococcus_tauri_virus(16.67%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYK17868.1\|1758365_1759979_-\|transposase	IS1634-like element ISAs25 family transposase	NA	NA	NA	NA
AYK17869.1\|1760109_1760634_-	acyloxyacyl hydrolase	NA	NA	NA	NA
AYK17870.1\|1760883_1762548_-	asparagine synthase B	H8ZJK1	Ostreococcus_tauri_virus	7.9e-93	41.0
AYK17871.1\|1762753_1763122_-	cupin domain-containing protein	NA	NA	NA	NA
AYK17872.1\|1763252_1764827_-	potassium transporter Kef	NA	NA	NA	NA
AYK17873.1\|1764881_1765631_-	HAD-IIA family hydrolase	NA	NA	NA	NA
AYK17874.1\|1765828_1766893_+	adenosine deaminase	NA	NA	NA	NA
AYK17875.1\|1767004_1767991_-	alcohol dehydrogenase	NA	NA	NA	NA
AYK17876.1\|1768137_1769259_-	alkene reductase	NA	NA	NA	NA
AYK17877.1\|1769455_1770991_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	5.1e-38	43.9
AYK17878.1\|1771291_1772218_-	cation diffusion facilitator family transporter	NA	NA	NA	NA
AYK17879.1\|1772310_1775457_+	FAD-binding oxidoreductase	NA	NA	NA	NA
AYK17880.1\|1775456_1775945_+	hypothetical protein	NA	NA	NA	NA
AYK17881.1\|1776113_1776575_+	hotdog fold thioesterase	NA	NA	NA	NA
AYK17882.1\|1776722_1778657_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	3.5e-60	36.7
AYK17883.1\|1779147_1780470_-	TRAP transporter large permease subunit	NA	NA	NA	NA
AYK17884.1\|1780743_1781469_-	ribonuclease T	NA	NA	NA	NA
AYK17885.1\|1781520_1782264_-	phosphatase PAP2 family protein	NA	NA	NA	NA
AYK17886.1\|1782511_1783633_+	4-phosphoerythronate dehydrogenase	NA	NA	NA	NA
AYK17887.1\|1783826_1784843_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AYK17888.1\|1785114_1787313_+	pilus assembly protein FimV	NA	NA	NA	NA
AYK17889.1\|1787513_1788323_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
AYK17890.1\|1788442_1789306_+	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA
AYK17891.1\|1789320_1790568_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
AYK17892.1\|1790642_1791443_+	cell division protein DedD	NA	NA	NA	NA
AYK17893.1\|1791614_1791932_+	hypothetical protein	NA	NA	NA	NA
AYK17894.1\|1792184_1792742_+	hypothetical protein	NA	NA	NA	NA
AYK17895.1\|1792791_1794405_+\|transposase	IS1634-like element ISAs25 family transposase	NA	NA	NA	NA
AYK17896.1\|1795221_1796643_+\|transposase	IS66-like element ISKpn15 family transposase	NA	NA	NA	NA
AYK17897.1\|1797746_1798757_-	sulfite reductase subunit C	NA	NA	NA	NA
AYK17898.1\|1798768_1799608_-	anaerobic sulfite reductase subunit AsrB	NA	NA	NA	NA
AYK17899.1\|1799609_1800668_-	anaerobic sulfite reductase subunit AsrA	NA	NA	NA	NA
AYK17900.1\|1800868_1801711_-	patatin family protein	NA	NA	NA	NA
AYK17901.1\|1801976_1802993_+	LD-carboxypeptidase	NA	NA	NA	NA
AYK17902.1\|1803057_1805313_-	alkaline phosphatase family protein	NA	NA	NA	NA
AYK17903.1\|1805568_1806654_+	hypothetical protein	NA	NA	NA	NA
AYK17904.1\|1806735_1808088_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
AYK17905.1\|1808509_1809838_-	amino-acid N-acetyltransferase	NA	NA	NA	NA
AYK17906.1\|1810106_1810739_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
AYK17907.1\|1811000_1811336_-	DUF3802 family protein	NA	NA	NA	NA
AYK17908.1\|1811393_1811882_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYK17909.1\|1811878_1812262_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
AYK17910.1\|1812380_1813172_+	alpha/beta fold hydrolase	NA	NA	NA	NA
AYK17911.1\|1813363_1814707_-	hypothetical protein	NA	NA	NA	NA
AYK17912.1\|1815312_1816386_-	carotenoid 1,2-hydratase	NA	NA	NA	NA
AYK17913.1\|1816382_1818812_-	FtsX-like permease family protein	NA	NA	NA	NA
AYK17914.1\|1818842_1819523_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-29	34.1
AYK17915.1\|1819720_1820188_+	DUF4357 domain-containing protein	NA	NA	NA	NA
AYK17916.1\|1820295_1821720_+	sodium:proton antiporter	NA	NA	NA	NA
AYK17917.1\|1821805_1823017_-	Bcr/CflA family drug resistance efflux transporter	S4TR35	Salmonella_phage	5.9e-21	23.9
AYK17918.1\|1823130_1824825_-	hypothetical protein	NA	NA	NA	NA
AYK17919.1\|1824883_1826317_-	hypothetical protein	NA	NA	NA	NA
AYK17920.1\|1826330_1826891_-	hypothetical protein	NA	NA	NA	NA
AYK17921.1\|1826925_1828350_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AYK17922.1\|1828452_1829292_-	hypothetical protein	NA	NA	NA	NA
AYK17923.1\|1832285_1832735_-	hypothetical protein	NA	NA	NA	NA
AYK17924.1\|1832967_1833951_+\|transposase	IS5 family transposase	Q38213	Escherichia_phage	1.3e-146	78.9
AYK17925.1\|1834109_1835072_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
AYK17926.1\|1835149_1836112_-\|transposase	IS1595 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1924201 : 1972987

Aeromonas_phage(21.43%)

protease,transposase,tRNA,integrase

attL 1930654:1930671|attR 1960079:1960096

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYK17987.1\|1924201_1925146_-\|tRNA	tRNA dihydrouridine(16) synthase DusC	NA	NA	NA	NA
AYK17988.1\|1925269_1925647_+	DUF454 domain-containing protein	NA	NA	NA	NA
AYK17989.1\|1925676_1926327_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.8e-30	42.7
AYK17990.1\|1926499_1929076_+	DNA polymerase III subunit gamma/tau	A0A1L2BWV7	Bacteriophage	1.1e-43	36.3
AYK17991.1\|1929190_1929520_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
AYK17992.1\|1929640_1929829_+	hypothetical protein	NA	NA	NA	NA
AYK17993.1\|1929838_1930681_+	deoxyribonuclease IV	A0A1V0SCI4	Indivirus	2.3e-16	26.0
1930654:1930671	attL	NA	NA	NA	NA
AYK17994.1\|1930776_1931682_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYK17995.1\|1931784_1932777_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AYK20233.1\|1933035_1934025_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
AYK17996.1\|1934172_1935171_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
AYK17997.1\|1935366_1936227_+	serine protein kinase RIO	NA	NA	NA	NA
AYK17998.1\|1936609_1938226_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
AYK17999.1\|1939887_1943358_-	transcription-repair coupling factor	NA	NA	NA	NA
AYK18000.1\|1943370_1943949_-	PilZ domain-containing protein	NA	NA	NA	NA
AYK18001.1\|1944025_1945261_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA
AYK20234.1\|1945265_1946057_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	2.1e-35	39.7
AYK18002.1\|1946056_1947298_+	lipoprotein-releasing ABC transporter permease subunit LolE	NA	NA	NA	NA
AYK18003.1\|1947428_1948019_-	5'-deoxynucleotidase	NA	NA	NA	NA
AYK18004.1\|1948103_1948538_-	YccF domain-containing protein	NA	NA	NA	NA
AYK18005.1\|1948968_1950279_+	trigger factor	NA	NA	NA	NA
AYK20235.1\|1950386_1950989_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	1.9e-60	61.2
AYK18006.1\|1951059_1952334_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.5e-131	57.5
AYK18007.1\|1952475_1954830_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.2e-224	53.6
AYK18008.1\|1955070_1955343_+	DNA-binding protein HU-beta	A7KV42	Bacillus_phage	5.0e-21	61.8
AYK20236.1\|1955496_1957407_+	peptidylprolyl isomerase	NA	NA	NA	NA
AYK18009.1\|1957621_1959214_-	ABC-F family ATPase	A0A2K9L0W2	Tupanvirus	6.5e-60	28.3
AYK18010.1\|1959239_1959701_-\|integrase	integrase	A0A1I9KF78	Aeromonas_phage	9.7e-25	42.3
AYK18011.1\|1959685_1960156_-	hypothetical protein	A0A1I9KF78	Aeromonas_phage	9.9e-25	40.1
1960079:1960096	attR	NA	NA	NA	NA
AYK18012.1\|1960197_1960449_-	DUF3596 domain-containing protein	A0A1I9KF78	Aeromonas_phage	6.9e-17	68.3
AYK18013.1\|1960843_1961029_-	hypothetical protein	NA	NA	NA	NA
AYK18014.1\|1962774_1962966_+	hypothetical protein	NA	NA	NA	NA
AYK18015.1\|1964034_1964214_-	hypothetical protein	NA	NA	NA	NA
AYK18016.1\|1964272_1965223_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
AYK18017.1\|1966065_1966254_+	hypothetical protein	NA	NA	NA	NA
AYK18018.1\|1966357_1967296_-	hypothetical protein	NA	NA	NA	NA
AYK18019.1\|1967468_1968386_+\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	7.4e-93	57.3
AYK18020.1\|1969467_1969659_-	hypothetical protein	NA	NA	NA	NA
AYK18021.1\|1969679_1970741_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AYK18022.1\|1971946_1972987_-\|transposase	IS481-like element ISAs19 family transposase	E9P643	Wolbachia_endosymbiont_wVitB_of_Nasonia_vitripennis_phage	1.7e-72	42.1

DBSCAN-SWA_5

2373914 : 2451357

Hokovirus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYK18318.1\|2373914_2374865_+\|transposase	IS1595-like element ISKpn3 family transposase	NA	NA	NA	NA
AYK18319.1\|2376149_2377196_+	diguanylate cyclase	NA	NA	NA	NA
AYK18320.1\|2377239_2378376_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
AYK18321.1\|2378388_2379660_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
AYK18322.1\|2379656_2381063_-	oligosaccharide repeat unit polymerase	NA	NA	NA	NA
AYK18323.1\|2381050_2382370_-	sugar translocase	NA	NA	NA	NA
AYK18324.1\|2382669_2383425_+	acyltransferase	NA	NA	NA	NA
AYK18325.1\|2383421_2384621_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
AYK18326.1\|2384617_2387158_+	hypothetical protein	NA	NA	NA	NA
AYK18327.1\|2387169_2387646_+	hypothetical protein	NA	NA	NA	NA
AYK18328.1\|2387623_2388070_-	hypothetical protein	NA	NA	NA	NA
AYK18329.1\|2388056_2388824_-	hypothetical protein	NA	NA	NA	NA
AYK18330.1\|2389946_2390387_-	hypothetical protein	NA	NA	NA	NA
AYK18331.1\|2391050_2391536_-	hypothetical protein	NA	NA	NA	NA
AYK18332.1\|2391918_2393334_-	chain-length determining protein	NA	NA	NA	NA
AYK18333.1\|2393491_2394607_+	glycosyltransferase	NA	NA	NA	NA
AYK18334.1\|2394638_2395832_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
AYK18335.1\|2395828_2396464_+	sugar transferase	NA	NA	NA	NA
AYK18336.1\|2396651_2397653_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
AYK18337.1\|2397733_2399224_-	response regulator	NA	NA	NA	NA
AYK18338.1\|2399247_2399916_-	tyrosine-protein kinase family protein	NA	NA	NA	NA
AYK18339.1\|2399917_2402023_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
AYK18340.1\|2402041_2402458_-	hypothetical protein	NA	NA	NA	NA
AYK18341.1\|2402454_2402805_-	anti-sigma factor antagonist	NA	NA	NA	NA
AYK18342.1\|2403143_2403635_+	molybdopterin-binding protein	NA	NA	NA	NA
AYK18343.1\|2403643_2405470_+	response regulator	A0A1V0SGX0	Hokovirus	3.8e-56	36.3
AYK18344.1\|2405985_2406774_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
AYK18345.1\|2406878_2408315_-	arginine-ornithine antiporter	NA	NA	NA	NA
AYK18346.1\|2408673_2409453_-	SDR family oxidoreductase	NA	NA	NA	NA
AYK18347.1\|2409505_2410408_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA
AYK18348.1\|2410459_2411572_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AYK20271.1\|2411590_2412373_-	enoyl-CoA hydratase	NA	NA	NA	NA
AYK18349.1\|2413969_2415112_+	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA
AYK18350.1\|2416720_2417575_+	crotonase	NA	NA	NA	NA
AYK18351.1\|2417571_2419542_+	biotin/lipoyl-binding protein	NA	NA	NA	NA
AYK18352.1\|2419538_2420507_+	hydroxymethylglutaryl-CoA lyase	A0A1V0SKU2	Klosneuvirus	3.3e-43	36.0
AYK18353.1\|2420509_2420920_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AYK18354.1\|2420956_2421718_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AYK18355.1\|2421770_2424758_+	DUF748 domain-containing protein	NA	NA	NA	NA
AYK18356.1\|2424981_2425578_+	hypothetical protein	NA	NA	NA	NA
AYK18357.1\|2425659_2426469_-	zinc-dependent peptidase	NA	NA	NA	NA
AYK18358.1\|2426500_2426938_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYK18359.1\|2427286_2428786_+	alanine:cation symporter family protein	NA	NA	NA	NA
AYK18360.1\|2428856_2429663_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
AYK18361.1\|2429831_2431619_+	cyclic nucleotide-binding/CBS domain-containing protein	NA	NA	NA	NA
AYK18362.1\|2431621_2432248_+	3'-5' exonuclease	NA	NA	NA	NA
AYK18363.1\|2432353_2432665_+	DUF485 domain-containing protein	NA	NA	NA	NA
AYK20272.1\|2432676_2434329_+	cation acetate symporter	NA	NA	NA	NA
AYK18364.1\|2434433_2435652_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	3.4e-16	33.5
AYK18365.1\|2436323_2437745_-\|transposase	IS66-like element ISKpn15 family transposase	NA	NA	NA	NA
AYK18366.1\|2440058_2440997_+\|transposase	IS630 family transposase	NA	NA	NA	NA
AYK18367.1\|2441526_2441907_-	diacylglycerol kinase	NA	NA	NA	NA
AYK18368.1\|2442024_2443650_-	MCR-3 family phosphoethanolamine--lipid A transferase	NA	NA	NA	NA
AYK18369.1\|2446987_2447188_+	hypothetical protein	NA	NA	NA	NA
AYK18370.1\|2448655_2450217_-\|transposase	IS3-like element ISAs20 family transposase	NA	NA	NA	NA
AYK18371.1\|2450316_2451357_-\|transposase	IS481-like element ISAs19 family transposase	E9P643	Wolbachia_endosymbiont_wVitB_of_Nasonia_vitripennis_phage	1.7e-72	41.8

DBSCAN-SWA_6

2599456 : 2610037

Bacillus_phage(42.86%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYK18477.1\|2599456_2600704_+	response regulator	A0A127AWB9	Bacillus_phage	2.5e-14	32.2
AYK18478.1\|2600812_2601283_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
AYK18479.1\|2601302_2602010_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AYK18480.1\|2602006_2602723_+	arginyltransferase	NA	NA	NA	NA
AYK18481.1\|2602791_2603010_+	translation initiation factor IF-1	NA	NA	NA	NA
AYK18482.1\|2603078_2605334_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	2.7e-168	43.0
AYK18483.1\|2605393_2605711_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.4e-14	49.4
AYK18484.1\|2605940_2606159_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.2e-17	63.2
AYK18485.1\|2606276_2607131_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	4.6e-28	32.9
AYK18486.1\|2607979_2608690_+	two-component system response regulator RstA	W8CYM9	Bacillus_phage	3.8e-28	31.4
AYK18487.1\|2608711_2610037_+	two-component system sensor histidine kinase RstB	W8CYF6	Bacillus_phage	7.4e-17	24.2

DBSCAN-SWA_7

3477389 : 3505449

uncultured_virus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYK19171.1\|3477389_3479033_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	2.4e-41	31.7
AYK19172.1\|3479088_3480147_+	DUF1016 domain-containing protein	Q9JMP5	Wolbachia_phage	9.2e-103	52.2
AYK19173.1\|3480266_3482456_+	hypothetical protein	NA	NA	NA	NA
AYK19174.1\|3482471_3483197_+	hypothetical protein	NA	NA	NA	NA
AYK19175.1\|3483181_3484882_+	hypothetical protein	NA	NA	NA	NA
AYK19176.1\|3484885_3488110_+	DEAD/DEAH box helicase	A0A160DHD3	Gordonia_phage	4.1e-37	28.8
AYK19177.1\|3488183_3489134_-\|transposase	IS1595-like element ISKpn3 family transposase	NA	NA	NA	NA
AYK19178.1\|3489605_3491036_-	hypothetical protein	NA	NA	NA	NA
AYK19179.1\|3491420_3492254_+	VWA domain-containing protein	NA	NA	NA	NA
AYK19180.1\|3492256_3492994_+	hypothetical protein	NA	NA	NA	NA
AYK19181.1\|3492997_3494671_+	protein kinase family protein	NA	NA	NA	NA
AYK19182.1\|3495088_3496510_-\|transposase	IS66-like element ISKpn15 family transposase	NA	NA	NA	NA
AYK19183.1\|3498190_3498700_+	hypothetical protein	NA	NA	NA	NA
AYK19184.1\|3500572_3500908_+	hypothetical protein	NA	NA	NA	NA
AYK19185.1\|3501249_3502810_+\|transposase	IS3-like element ISAs20 family transposase	NA	NA	NA	NA
AYK19186.1\|3502807_3503899_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
AYK19187.1\|3504417_3505449_-\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

4026551 : 4084363

Bacillus_thuringiensis_phage(50.0%)

transposase,tRNA,integrase

attL 4075813:4075872|attR 4097236:4097312

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYK19621.1\|4026551_4027499_+	hypothetical protein	Q56AS0	Bacillus_thuringiensis_phage	9.3e-22	100.0
AYK19622.1\|4027583_4028198_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.9e-113	97.1
AYK19623.1\|4028215_4028695_-	hypothetical protein	Q56AR5	Bacillus_thuringiensis_phage	3.0e-37	98.7
AYK19624.1\|4028639_4028828_+	hypothetical protein	Q56AR2	Bacillus_thuringiensis_phage	1.4e-17	97.6
AYK19625.1\|4028871_4029888_-	chemotaxis signal transduction protein CheV	Q56AR1	Bacillus_thuringiensis_phage	1.3e-191	99.7
AYK19626.1\|4030089_4030809_+	SDR family NAD(P)-dependent oxidoreductase	Q56AQ6	Bacillus_thuringiensis_phage	1.2e-130	97.1
AYK19627.1\|4030795_4032862_-\|tRNA	tRNA(Met) cytidine acetyltransferase	Q56AQ2	Bacillus_thuringiensis_phage	1.0e-97	93.3
AYK19628.1\|4032858_4033170_-	transcriptional regulator	NA	NA	NA	NA
AYK19629.1\|4033306_4033513_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
AYK19630.1\|4033657_4034134_+	bacterioferritin	NA	NA	NA	NA
AYK19631.1\|4034318_4034777_+	methylglyoxal synthase	NA	NA	NA	NA
AYK20364.1\|4034866_4036042_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
AYK19632.1\|4036057_4037026_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.0e-180	97.2
AYK19633.1\|4037362_4037884_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
AYK19634.1\|4037880_4038834_+	fec operon regulator FecR	NA	NA	NA	NA
AYK19635.1\|4038920_4041245_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
AYK19636.1\|4041303_4042206_+	Fe(3+)-dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
AYK19637.1\|4042202_4043201_+	iron-dicitrate ABC transporter permease FecC	A0A2H4IY97	uncultured_Caudovirales_phage	2.3e-10	23.0
AYK19638.1\|4043197_4044154_+	iron-dicitrate ABC transporter permease FecD	A0A2H4IY97	uncultured_Caudovirales_phage	2.0e-16	25.2
AYK19639.1\|4044154_4044922_+	iron-dicitrate ABC transporter ATP-binding subunit	G3M9Y6	Bacillus_virus	4.9e-13	25.2
AYK19640.1\|4045347_4045644_-	XRE family transcriptional regulator	NA	NA	NA	NA
AYK19641.1\|4046502_4047774_+	hypothetical protein	NA	NA	NA	NA
AYK19642.1\|4048523_4049441_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	2.6e-98	58.2
AYK19643.1\|4049729_4050314_+	hypothetical protein	NA	NA	NA	NA
AYK20365.1\|4050414_4050840_-	hypothetical protein	NA	NA	NA	NA
AYK19644.1\|4051063_4051810_-	SDR family oxidoreductase	NA	NA	NA	NA
AYK19645.1\|4051852_4052089_-	DUF3624 domain-containing protein	NA	NA	NA	NA
AYK19646.1\|4052085_4052559_-	N-acetyltransferase	NA	NA	NA	NA
AYK19647.1\|4052746_4054189_+	RimK family alpha-L-glutamate ligase	NA	NA	NA	NA
AYK20366.1\|4054216_4054744_+	MgtC/SapB family protein	G3MA03	Bacillus_virus	3.6e-07	33.7
AYK19648.1\|4054789_4056118_-\|transposase	IS4 family transposase	NA	NA	NA	NA
AYK19649.1\|4056236_4057853_-	glycosidase	NA	NA	NA	NA
AYK19650.1\|4060174_4060432_-	DUF2442 domain-containing protein	NA	NA	NA	NA
AYK19651.1\|4060691_4062656_+	LTA synthase family protein	NA	NA	NA	NA
AYK19652.1\|4062747_4063218_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AYK19653.1\|4063361_4063880_+	protein tyrosine phosphatase	NA	NA	NA	NA
AYK19654.1\|4063880_4064828_-	homoserine O-succinyltransferase	NA	NA	NA	NA
AYK19655.1\|4064912_4066211_+	DUF3391 domain-containing protein	NA	NA	NA	NA
AYK19656.1\|4066264_4067413_+	CinA family nicotinamide mononucleotide deamidase-related protein	NA	NA	NA	NA
AYK19657.1\|4067614_4069336_+	DUF342 domain-containing protein	NA	NA	NA	NA
AYK19658.1\|4069450_4070260_+	sugar-phosphatase	NA	NA	NA	NA
AYK19659.1\|4070369_4073453_-	penicillin-binding protein	NA	NA	NA	NA
AYK19660.1\|4073661_4073979_-	DUF496 family protein	NA	NA	NA	NA
AYK19661.1\|4074658_4074871_+	hypothetical protein	NA	NA	NA	NA
AYK19662.1\|4074861_4075812_-\|transposase	IS1595-like element ISKpn3 family transposase	NA	NA	NA	NA
4075813:4075872	attL	NA	NA	NA	NA
AYK19663.1\|4075898_4076315_+	hypothetical protein	NA	NA	NA	NA
AYK19664.1\|4076307_4078542_+	hypothetical protein	NA	NA	NA	NA
AYK19665.1\|4078526_4081889_+\|integrase	site-specific integrase	NA	NA	NA	NA
AYK19666.1\|4082321_4083188_-	HDIG domain-containing protein	NA	NA	NA	NA
AYK19667.1\|4083184_4084363_-\|integrase	site-specific integrase	R9TMP3	Vibrio_phage	5.2e-22	23.7
4097236:4097312	attR	NA	NA	NA	NA

DBSCAN-SWA_9

4090810 : 4149371

Salmonella_phage(20.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYK19673.1\|4090810_4092352_-\|transposase	IS21-like element ISAs29 family transposase	K4I413	Acidithiobacillus_phage	4.4e-130	47.6
AYK19674.1\|4093039_4094461_+\|transposase	IS66-like element ISKpn15 family transposase	NA	NA	NA	NA
AYK19675.1\|4095263_4095449_+	hypothetical protein	NA	NA	NA	NA
AYK20367.1\|4095583_4097161_-	PAS domain S-box protein	A0A1B0V854	Salmonella_phage	1.0e-94	97.2
AYK19676.1\|4097295_4098246_+\|transposase	IS1595-like element ISKpn3 family transposase	NA	NA	NA	NA
AYK19677.1\|4098341_4098554_-	DUF3330 domain-containing protein	NA	NA	NA	NA
AYK20368.1\|4098516_4098636_+	mercury resistance protein	NA	NA	NA	NA
AYK19678.1\|4098619_4098856_-	mercury resistance protein	NA	NA	NA	NA
AYK19679.1\|4098852_4099218_-	transcriptional regulator	NA	NA	NA	NA
AYK19680.1\|4099235_4100921_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.3e-39	29.1
AYK19681.1\|4100959_4101385_-	mercury transporter MerC	NA	NA	NA	NA
AYK19682.1\|4101412_4101688_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
AYK19683.1\|4101703_4102084_-	mercuric transporter	NA	NA	NA	NA
AYK19684.1\|4102155_4102611_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
AYK19685.1\|4102659_4103235_+	phospholipid:lipid A palmitoyltransferase	NA	NA	NA	NA
AYK19686.1\|4103242_4104208_-	acyltransferase	NA	NA	NA	NA
AYK19687.1\|4104358_4107415_-	efflux RND transporter permease subunit	S5VL66	Leptospira_phage	7.1e-23	21.9
AYK19688.1\|4107414_4108500_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AYK19689.1\|4108844_4109861_-\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	2.2e-186	99.4
AYK19690.1\|4110035_4110284_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
AYK19691.1\|4110410_4110986_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	5.6e-46	52.7
AYK19692.1\|4111164_4111785_+	hypothetical protein	A0A1B0V7H9	Salmonella_phage	1.4e-42	100.0
AYK19693.1\|4112395_4113427_-\|transposase	IS630-like element ISAhy2 family transposase	NA	NA	NA	NA
AYK19694.1\|4113537_4118640_-	DNA phosphorothioation-dependent restriction protein DptH	NA	NA	NA	NA
AYK19695.1\|4119806_4121135_+\|transposase	IS4 family transposase	NA	NA	NA	NA
AYK19696.1\|4121389_4123009_-	DNA phosphorothioation-dependent restriction protein DptF	NA	NA	NA	NA
AYK19697.1\|4129110_4131978_+	RNA polymerase-associated protein RapA	A0A1B1IUI1	uncultured_Mediterranean_phage	2.2e-21	38.8
AYK19698.1\|4132093_4132750_+\|tRNA	bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA	NA	NA	NA
AYK19699.1\|4132810_4132999_-	hypothetical protein	NA	NA	NA	NA
AYK19700.1\|4133118_4133718_-	sugar O-acetyltransferase	NA	NA	NA	NA
AYK19701.1\|4133721_4135383_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
AYK19702.1\|4135449_4136880_-	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
AYK19703.1\|4137072_4138020_-	HTH-type transcriptional regulator TreR	NA	NA	NA	NA
AYK19704.1\|4138157_4139108_+	AEC family transporter	NA	NA	NA	NA
AYK19705.1\|4139170_4139365_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
AYK19706.1\|4139495_4140554_+	L-asparaginase 2	NA	NA	NA	NA
AYK19707.1\|4140797_4142090_+	HlyC/CorC family transporter	NA	NA	NA	NA
AYK19708.1\|4142108_4142774_+	DedA family protein	NA	NA	NA	NA
AYK19709.1\|4142933_4143761_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
AYK19710.1\|4145199_4145388_-	carbon storage regulator	A0A2I7RT00	Vibrio_phage	2.9e-12	66.7
AYK19711.1\|4145491_4146730_-	aspartate kinase	NA	NA	NA	NA
AYK19712.1\|4146746_4149371_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	9.6e-77	38.3

DBSCAN-SWA_10

4181173 : 4253234

Salmonella_phage(11.11%)

protease,transposase,tRNA,integrase

attL 4173461:4173476|attR 4199982:4199997

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4173461:4173476	attL	NA	NA	NA	NA
AYK19744.1\|4181173_4182595_+\|transposase	IS66-like element ISKpn15 family transposase	NA	NA	NA	NA
AYK20373.1\|4182904_4185634_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
AYK19745.1\|4186886_4187321_-	inovirus Gp2 family protein	NA	NA	NA	NA
AYK19746.1\|4187381_4188943_-\|transposase	IS3-like element ISAs20 family transposase	NA	NA	NA	NA
AYK19747.1\|4188990_4189269_-	inovirus Gp2 family protein	NA	NA	NA	NA
AYK19748.1\|4189883_4190072_-	AlpA family phage regulatory protein	NA	NA	NA	NA
AYK19749.1\|4190625_4191579_+	hypothetical protein	NA	NA	NA	NA
AYK19750.1\|4191671_4192955_-\|integrase	site-specific integrase	Q9AZ40	Salmonella_phage	5.7e-14	23.3
AYK19751.1\|4193158_4195714_+	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	1.8e-35	24.6
AYK19752.1\|4195790_4196654_-	patatin family protein	NA	NA	NA	NA
AYK19753.1\|4197904_4198594_-	LrgB family protein	NA	NA	NA	NA
AYK20374.1\|4198586_4198988_-	CidA/LrgA family protein	NA	NA	NA	NA
AYK19754.1\|4199122_4200007_+	LysR family transcriptional regulator	NA	NA	NA	NA
4199982:4199997	attR	NA	NA	NA	NA
AYK19755.1\|4200000_4200885_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AYK19756.1\|4201068_4201533_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
AYK19757.1\|4201752_4202190_+	N-acetyltransferase	NA	NA	NA	NA
AYK19758.1\|4202182_4203124_+	DUF2971 domain-containing protein	NA	NA	NA	NA
AYK19759.1\|4203291_4203831_-\|transposase	transposase	NA	NA	NA	NA
AYK19760.1\|4204350_4205556_-	2-iminoacetate synthase ThiH	NA	NA	NA	NA
AYK19761.1\|4205591_4206359_-	thiazole synthase	NA	NA	NA	NA
AYK19762.1\|4206360_4206567_-	sulfur carrier protein ThiS	NA	NA	NA	NA
AYK19763.1\|4206563_4207340_-	HesA/MoeB/ThiF family protein	NA	NA	NA	NA
AYK19764.1\|4207329_4208946_-	thiamine phosphate synthase	NA	NA	NA	NA
AYK19765.1\|4208942_4210934_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
AYK19766.1\|4214590_4215076_-	hypothetical protein	NA	NA	NA	NA
AYK19767.1\|4215162_4215585_-	hypothetical protein	NA	NA	NA	NA
AYK19768.1\|4215673_4216342_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	6.7e-27	33.3
AYK19769.1\|4216338_4217583_+	sensor histidine kinase	NA	NA	NA	NA
AYK19770.1\|4217678_4218575_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	7.9e-39	34.3
AYK19771.1\|4218806_4222502_-	methionine synthase	A0A140XBC7	Dickeya_phage	1.2e-21	80.3
AYK19772.1\|4222718_4223990_+	sodium:proton antiporter	A0A2H4J178	uncultured_Caudovirales_phage	2.3e-39	39.8
AYK19773.1\|4224496_4224673_+	hypothetical protein	NA	NA	NA	NA
AYK19774.1\|4224826_4225324_-	N-acetyltransferase	NA	NA	NA	NA
AYK19775.1\|4225452_4226274_-	HDOD domain-containing protein	A0A1C3NFB0	Phage_NCTB	3.5e-09	24.0
AYK19776.1\|4226443_4226710_+	hypothetical protein	NA	NA	NA	NA
AYK19777.1\|4226783_4227503_-	class B acid phosphatase	NA	NA	NA	NA
AYK19778.1\|4227609_4228284_-	adenine nucleotide alpha hydrolase	NA	NA	NA	NA
AYK19779.1\|4228450_4229770_+	MFS transporter	Q6JIH2	Burkholderia_virus	3.7e-37	29.4
AYK19780.1\|4229908_4230631_+	MarC family NAAT transporter	NA	NA	NA	NA
AYK20375.1\|4230790_4230994_+	hypothetical protein	NA	NA	NA	NA
AYK19781.1\|4231126_4232566_-\|protease	metalloprotease TldD	NA	NA	NA	NA
AYK19782.1\|4232707_4233541_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
AYK19783.1\|4233566_4233887_-	Dabb family protein	NA	NA	NA	NA
AYK20376.1\|4233921_4237785_-	TIGR02099 family protein	NA	NA	NA	NA
AYK19784.1\|4237815_4239285_-	ribonuclease G	NA	NA	NA	NA
AYK19785.1\|4239364_4239952_-	septum formation inhibitor Maf	NA	NA	NA	NA
AYK19786.1\|4239954_4240440_-	rod shape-determining protein MreD	NA	NA	NA	NA
AYK19787.1\|4240439_4241330_-	rod shape-determining protein MreC	NA	NA	NA	NA
AYK19788.1\|4241372_4242413_-	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	2.1e-06	21.9
AYK19789.1\|4245428_4246352_+	1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase	NA	NA	NA	NA
AYK19790.1\|4246428_4248387_-	RNase E specificity factor CsrD	NA	NA	NA	NA
AYK19791.1\|4248862_4250389_+	EAL domain-containing protein	NA	NA	NA	NA
AYK19792.1\|4250670_4251768_+	calcium:proton antiporter	NA	NA	NA	NA
AYK19793.1\|4251896_4253234_+\|transposase	IS4-like element ISAeme15 family transposase	NA	NA	NA	NA

DBSCAN-SWA_11

4647015 : 4657658

Liberibacter_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYK20111.1\|4647015_4650300_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	3.2e-69	27.6
AYK20112.1\|4650296_4651316_-	hydroxyacid dehydrogenase	Q9JMN3	Wolbachia_phage	5.1e-58	40.4
AYK20113.1\|4651329_4652028_-	YecA family protein	H9NBT7	Sphingomonas_phage	3.4e-05	69.0
AYK20114.1\|4652024_4653272_-	restriction endonuclease subunit S	NA	NA	NA	NA
AYK20115.1\|4653261_4654788_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.2e-87	38.5
AYK20116.1\|4654791_4655628_-	DNA damage-inducible protein D	A0A1W6JPJ7	Morganella_phage	2.6e-92	78.4
AYK20117.1\|4655624_4656230_-	restriction endonuclease subunit S	NA	NA	NA	NA
AYK20397.1\|4656463_4656799_+	DNA-binding protein	NA	NA	NA	NA
AYK20398.1\|4656806_4657658_+	hypothetical protein	A0A0E3GMB2	Rhodoferax_phage	1.1e-18	29.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP032840

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP032840_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032840_1

18048-18129

Orphan

Consensus_repeat	Method
AGTGTTCCCGCGTGAGCGGGATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032840_1

>merge|CP032840|1|18048-18129|CRISPRCasFinder
AGTGTTCCCGCGTGAGCGGGATGAACCGATCGAGGCCAGCACGGAAACCGAGGCATCAACGTGTTCCCGCGTGAGCGGGATG

>CP032840|1|1|18048-18129|CRISPRCasFinder
AGTGTTCCCGCGTGAGCGGGATG	AACCGATCGAGGCCAGCACGGAAACCGAGGCATCAA
CGTGTTCCCGCGTGAGCGGGATG

Protein	Signature genes	Signature genes Name	Protein_function
CP032840.1\|AYK20413.1\|22933_23143_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379262
CP032840.1\|AYK20415.1\|23937_24213_+\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20400.1\|12757_13534_+\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20410.1\|19285_19471_-\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20401.1\|13533_13944_+\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20414.1\|23542_23821_+\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20535.1\|20141_20396_-\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20409.1\|18919_19270_-\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20399.1\|0_237_+\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20416.1\|26621_27083_+\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20407.1\|17342_17552_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376215
CP032840.1\|AYK20405.1\|16134_16638_+\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20404.1\|15541_16138_+\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20411.1\|20685_21000_-\|HU-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|259853
CP032840.1\|AYK20402.1\|14027_14330_+\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20412.1\|21002_21308_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377432
CP032840.1\|AYK20403.1\|14326_15376_+\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20406.1\|16675_17116_+\|hypothetical-protein	unknown	unknown	unknown
CP032840.1\|AYK20408.1\|18183_18987_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366169

Protein	Function_ID	Function_description	E-value
CP032840.1\|AYK20413.1\|22933_23143_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	0.00205102
CP032840.1\|AYK20407.1\|17342_17552_+\|hypothetical-protein	gnl\|CDD\|376215	pfam18796, LPD1, Large polyvalent protein-associated domain 1. This is an alpha helical domain with a conserved ExxARxxE motif that is found in polyvalent proteins of both conjugative elements and phages and prophages.	0.000831138
CP032840.1\|AYK20408.1\|18183_18987_-\|hypothetical-protein	gnl\|CDD\|366169	pfam00565, SNase, Staphylococcal nuclease homolog. Present in all three domains of cellular life. Four copies in the transcriptional coactivator p100: these, however, appear to lack the active site residues of Staphylococcal nuclease. Positions 14 (Asp-21), 34 (Arg-35), 39 (Asp-40), 42 (Glu-43) and 110 (Arg-87) [SNase numbering in parentheses] are thought to be involved in substrate-binding and catalysis.	8.49996e-31
CP032840.1\|AYK20411.1\|20685_21000_-\|HU-family-DNA-binding-protein	gnl\|CDD\|259853	cd13831, HU, histone-like DNA-binding protein HU. This subfamily includes HU and HU-like domains. HU is a conserved nucleoid-associated protein (NAP) which binds non-specifically to duplex DNA with a particular preference for targeting nicked and bent DNA. It is highly basic and contributes to chromosomal compaction and maintenance of negative supercoiling, thus often referred to as histone-like protein. HU can induce DNA bends, condense DNA in a fiber and also interact with single stranded DNA. It contains two homologous subunits, alpha and beta, typically forming homodimers (alpha-alpha and beta-beta), except in E. coli and other enterobacteria, which form heterodimers (alpha-beta). In E. coli, HU binds uniformly to the chromosome, with a preference for damaged or distorted DNA structures and can introduce negative supercoils into closed circular DNA in the presence of topoisomerase I. Anabaena HU (AHU) shows preference for A/T-rich region in the center of its DNA binding site.	5.05424e-36
CP032840.1\|AYK20412.1\|21002_21308_-\|hypothetical-protein	gnl\|CDD\|377432	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter. Members of this family are integral membrane proteins that are involved in transport of nicotinamide mononucleotide.	0.000819751

>CP032840.1|AYK20407.1|17342_17552_+|hypothetical-protein
MLDQLDAKGARSDYLVYGADEQRYASHPVGNPNPTGSDRRVLAEHFNNLMAEYRLRCVSRAEADTGVEP
>CP032840.1|AYK20406.1|16675_17116_+|hypothetical-protein
MHALDFHLGEKAGYASEQREGDPRGSVMGALSHAMKRRPGDAEDIHSRASANARRGADNALSWLYLQSEETRRHLKDVMESLHQKAATDFTEKAARHIEAIKGNPSFSETGIGPAGAVVWEALSGMEEEIFETLRKGATTSRASPR
>CP032840.1|AYK20405.1|16134_16638_+|hypothetical-protein
MNTEAVVPQKIRSEISKRERRVAGWGQTATEEQLWGTLIKAKREKSEAEKEAEAEKADQDRELHRPHLDRVERSGEDWRSGRDIVADDLIEHFGFRAVEFGNWLPQDERQQVLNMAFDSLCDLADALDIPPSGVSFDGELAVAFGSRGRGGSTRRWPISSLRGLSST
>CP032840.1|AYK20404.1|15541_16138_+|hypothetical-protein
MKRGHELMADHAKELAKQKLRELAETVQTDAAAPGDGKVKHVDAGEKIGGARKDYARRSLTIEDLDSMNDMERKTYVLKKNVWASLNYQQMREDGVTPQAAIAIKYLKDAINVEPDRRHSMIADDPRASTSALSARCVTRWLRSRHWMTSRTLAFGSSRPGAATATTSMVGRPFRWRLAVMQATSCTTPSVPTAGAKT
>CP032840.1|AYK20403.1|14326_15376_+|hypothetical-protein
MTDGFVERHIKWFDLARFGAALRVVPESPLRGVAVTCLEIRDRDLYQRMYGWPTDREVTADERRALHESFTQAKQDLGFGEQPQPVSVGSYENNDFKQYLRFFSTKTEFSLSELRRLCPGLDAEDLRDMPVDEIRLVAEPEAGMDGEWAAFADRVLAVENKGVWTPVVNPFEKPFAESGAIPEADPRLSRQEFPLLGGNTVSRHYGMSDRLHRANYRQNALVPFYADLESAQADGWKREDLQQVDLPYAAPLWVTRAGQIIALKDVRFAPEIMDIGPEQYYSAGPGGLIVAAIREAKGIAPVVAKAVENWRVGASPRSWRCRICSGVLSPGWCLRWRNCGSAIRDCRPM
>CP032840.1|AYK20402.1|14027_14330_+|hypothetical-protein
MGRGGARVRGRAQLSVDLGATRPGDDAPTVQIEFGVQDEQERHATGGLVARWSRDRSCIEGLEIVLIDGKPCDVSPFAARLAAYVELPATVRETAVRDAD
>CP032840.1|AYK20401.1|13533_13944_+|hypothetical-protein
MDKMKPNGEMSDLHEKFRTAVAESPDAQTNKKAMDKALDGWVRQYGRGQEELLNPETEGNPHFEELRDRLDNSHGRMQKNTANAPLFEGEDKSHAEKLRETIQRIMEKLKEIAKDFVNMVRGKKGADAEADNDPSP
>CP032840.1|AYK20400.1|12757_13534_+|hypothetical-protein
MSNKPTKCSPQIDGVPADAAVAQNPAASTAEGAGLPPAVQQADTAPDAEAEVVTEIEPEVVTEPERRNEHIEDAEYEDVVPDAEAEAAAQGDKVTLDRATYEALMGVAKKVNAGAMLVDPDELQRVNAAVQQGGMIPGAGPTQGQQQVKTGAQALAEGGMSLLGGAAALTGAALKAGGKVASSLAGALRERDGSEAQEAPAAGVAVLPRISEYRVDQAEKAANAYEDAMQKLWSRATCRTSARKSKSVPDRPGCPSRT
>CP032840.1|AYK20399.1|0_237_+|hypothetical-protein
LGELRLVETRRAASVAFLNRFELLASPEAMRAVASELVASRVSVALSHGAERRMAVAWRTGGAVTVAEFDVSEPGSPA
>CP032840.1|AYK20408.1|18183_18987_-|hypothetical-protein
MPISRRFSHGFRPARCHGARTTEGFTVAALCKLCGISVALFAVLAPALAAASELSGRVVGVADGDTLTLLHAQTPVRIRLAEIDAPEKAQPFGQRSKQSLSDLCYGKEALVVVSAQDRYGRSIGRVWCAGTDANAEQVRRGMAWVYDRYATDKTLYSLQDAARQARNGLWADPAPVRPWNGAGFPDSNHPHLRVLSIRASLAHIAALAAASGGSCCHLGHSAPSPAATTDISAAPCLRRVPPLQRRRPRPHQRLPTALQRPPPVKPS
>CP032840.1|AYK20409.1|18919_19270_-|hypothetical-protein
MEPKDDRDALFAVIRELETLHTNCVNKAKFIDNVMSGKEQITFATIDRCREALMQLNQAHHVFKSLYEKHSSTAEVQDRMKAICDTNRTTADKANADLKAILAWVPPGPMSRRTDN
>CP032840.1|AYK20410.1|19285_19471_-|hypothetical-protein
MKAAGIDEAIAQHMMARRTPAANNAMELLRMQVASYEPAGFALLQAAVEDCRKEIAAPTPT
>CP032840.1|AYK20535.1|20141_20396_-|hypothetical-protein
MNDLTPDEIALIQQRRAEQAQRDAAQAFQRKAIATAHAFDDWSATTGEGLTFSTFVNTFGYQDEDGKQMYEAVKRILDAAWPQA
>CP032840.1|AYK20411.1|20685_21000_-|HU-family-DNA-binding-protein
MNRQELIEHIAEATGETKAASGRFLDAFINTVQTAVASGDKVSLVGFGSFETVSTKARQGRNPATGDVLTIDATVRPKFSPGSNFKALVKETLRSETPCDRGFG
>CP032840.1|AYK20412.1|21002_21308_-|hypothetical-protein
MDNLYELIGASTGIAGAILLAIKCRFSAWAWPLWIVSGVAWIVYAQATSTYGLLAQQVVFTTINLIGTWRWLIQPIAQKTGVRLAGTPAANAATPTTDRNQ
>CP032840.1|AYK20413.1|22933_23143_-|XRE-family-transcriptional-regulator
MTTHAKPKATTKRMTPEEFKAEIQRRGWTYRALAERWDVSDNWISKIARNENRPLHWDDAVRGLPMVMK
>CP032840.1|AYK20414.1|23542_23821_+|hypothetical-protein
MATSSLKGMAADPSVAGVKKTDLFRVDPRLLDEEEGFNLRDYSDPEVIAHIEGFADSYANGRYVPPLVVRTTVDGRIVPVEGTAAAVGAARH
>CP032840.1|AYK20415.1|23937_24213_+|hypothetical-protein
MGYLRLNRMGHSNAKIAEVMRKTPARVEQMLLLATANHDVHELVRAGTVTADAAIEAIREHRENAGPFLLGKLEEAKGRARPRSREGDAWA
>CP032840.1|AYK20416.1|26621_27083_+|hypothetical-protein
MANEDFESQLRRLVTGLADQEIKAGRGFAYDGGVMHADDVAEALPSILCIAQDLSRRLGVGDFGYRFEMREPNPVFPLHAIPERPAPRFFEVAPFITEVFDGEVMDCRQDLALLFEAAAKLLRPEFNLDTHTNYTATTVAVSADDAPAPSLGR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP032840_1	1.1\|18071\|36\|CP032840\|CRISPRCasFinder	18071-18106	36	CP032840.1	131640-131675	0	1.0

1. spacer 1.1|18071|36|CP032840|CRISPRCasFinder matches to position: 131640-131675, mismatch: 0, identity: 1.0

aaccgatcgaggccagcacggaaaccgaggcatcaa	CRISPR spacer
aaccgatcgaggccagcacggaaaccgaggcatcaa	Protospacer
************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP032840_1	1.1\|18071\|36\|CP032840\|CRISPRCasFinder	18071-18106	36	CP032840	Aeromonas veronii strain FC951 plasmid unnamed	18071-18106	0	1.0
CP032840_1	1.1\|18071\|36\|CP032840\|CRISPRCasFinder	18071-18106	36	CP032840	Aeromonas veronii strain FC951 plasmid unnamed	131640-131675	0	1.0

1. spacer 1.1|18071|36|CP032840|CRISPRCasFinder matches to CP032840 (Aeromonas veronii strain FC951 plasmid unnamed) position: , mismatch: 0, identity: 1.0

aaccgatcgaggccagcacggaaaccgaggcatcaa	CRISPR spacer
aaccgatcgaggccagcacggaaaccgaggcatcaa	Protospacer
************************************

2. spacer 1.1|18071|36|CP032840|CRISPRCasFinder matches to CP032840 (Aeromonas veronii strain FC951 plasmid unnamed) position: , mismatch: 0, identity: 1.0

aaccgatcgaggccagcacggaaaccgaggcatcaa	CRISPR spacer
aaccgatcgaggccagcacggaaaccgaggcatcaa	Protospacer
************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP032839

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP032840

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection