CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP019066	Tsukamurella tyrosinosolvens strain MH1 chromosome, complete genome	4 crisprs	csa3,WYL,cas3,DinG,DEDDh,RT,Cas9_archaeal	1	10	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP019066_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019066_2

937128-937231

Orphan

Consensus_repeat	Method
GGGGATTCGGCGCCGCGCGGGGGACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019066_2

>merge|CP019066|2|937128-937231|CRISPRCasFinder
GGGGATTCGGCGCCGCGCGGGGGACGTTCGAGCCCCCACCGGAGGAACGGCGCCTGATGGGGGACGGAACGCCGGGGTGGGGATTCGGCGCGGCGCGGGGGACG

>CP019066|2|2|937128-937231|CRISPRCasFinder
GGGGATTCGGCGCCGCGCGGGGGACG	TTCGAGCCCCCACCGGAGGAACGGCGCCTGATGGGGGACGGAACGCCGGGGT
GGGGATTCGGCGCGGCGCGGGGGACG

Protein	Signature genes	Signature genes Name	Protein_function
CP019066.1\|AUN39374.1\|928824_929184_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223619
CP019066.1\|AUN39389.1\|944537_945137_+\|pyridoxamine-5-phosphate-oxidase	unknown	unknown	gnl\|CDD\|334450
CP019066.1\|AUN39384.1\|938618_939353_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|236115
CP019066.1\|AUN39381.1\|934470_935979_-\|acetyl-CoA-carboxyl-transferase	unknown	unknown	gnl\|CDD\|223848
CP019066.1\|AUN39386.1\|940465_940672_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379416
CP019066.1\|AUN39387.1\|940702_942283_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238733
CP019066.1\|AUN39383.1\|937494_938595_-\|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|224983
CP019066.1\|AUN39385.1\|939354_940455_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293841
CP019066.1\|AUN39388.1\|944056_944500_-\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
CP019066.1\|AUN39378.1\|931687_932488_-\|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl\|CDD\|372782
CP019066.1\|AUN39382.1\|936030_936855_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|381357
CP019066.1\|AUN39375.1\|929239_929668_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350298
CP019066.1\|AUN39379.1\|932576_933830_+\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|234815
CP019066.1\|AUN39380.1\|933951_934470_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379513
CP019066.1\|AUN39391.1\|945761_946040_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
CP019066.1\|AUN39390.1\|945146_945758_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
CP019066.1\|AUN39377.1\|930066_931671_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
CP019066.1\|AUN42832.1\|942476_943592_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277331
CP019066.1\|AUN39376.1\|929664_929913_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|172484
CP019066.1\|AUN39373.1\|927480_928773_+\|citrate-(Si)-synthase	unknown	unknown	gnl\|CDD\|180164

Protein	Function_ID	Function_description	E-value
CP019066.1\|AUN39374.1\|928824_929184_+\|peptidylprolyl-isomerase	gnl\|CDD\|223619	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones].	6.08801e-40
CP019066.1\|AUN39389.1\|944537_945137_+\|pyridoxamine-5-phosphate-oxidase	gnl\|CDD\|334450	pfam01243, Putative_PNPOx, Pyridoxamine 5'-phosphate oxidase. Family of domains with putative PNPOx function. Family members were predicted to encode pyridoxamine 5'-phosphate oxidase, based on sequence similarity. However, there is no experimental data to validate the predicted activity and purified proteins, such as yeast YLR456W and its paralogs, do not possess this activity, nor do they bind to flavin mononucleotide (FMN). To date, the only time functional oxidase activity has been experimentally demonstrated is when the sequences contain both pfam01243 and pfam10590. Moreover, some of the family members that contain both domains have been shown to be involved in phenazine biosynthesis. While some molecular function has been experimentally validated for the proteins containing both domains, the role performed by each domain on its own is unknown.	1.78782e-10
CP019066.1\|AUN39384.1\|938618_939353_+\|enoyl-CoA-hydratase	gnl\|CDD\|236115	PRK07854, PRK07854, enoyl-CoA hydratase; Provisional.	5.73216e-85
CP019066.1\|AUN39381.1\|934470_935979_-\|acetyl-CoA-carboxyl-transferase	gnl\|CDD\|223848	COG0777, AccD, Acetyl-CoA carboxylase beta subunit [Lipid metabolism].	7.80719e-92
CP019066.1\|AUN39386.1\|940465_940672_+\|hypothetical-protein	gnl\|CDD\|379416	pfam14013, MT0933_antitox, MT0933-like antitoxin protein. This family of proteins contains the MT0933 protein, which has been identified as an antitoxin to /protein MT0934. This family of proteins is found in bacteria. Proteins in this family are typically between 61 and 90 amino acids in length.	2.27838e-05
CP019066.1\|AUN39387.1\|940702_942283_+\|hypothetical-protein	gnl\|CDD\|238733	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the members of this subgroup. All members of this subgroup however have a conserved MIDAS motif. .	2.84769e-24
CP019066.1\|AUN39383.1\|937494_938595_-\|pyridine-nucleotide-disulfide-oxidoreductase	gnl\|CDD\|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	2.19195e-36
CP019066.1\|AUN39385.1\|939354_940455_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293841	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain. Derepression of the romA-ramA locus results in a multidrug-resistance phenotype. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	2.29864e-64
CP019066.1\|AUN39388.1\|944056_944500_-\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	7.36905e-96
CP019066.1\|AUN39378.1\|931687_932488_-\|pyridoxamine-5'-phosphate-oxidase	gnl\|CDD\|372782	pfam13883, Pyrid_oxidase_2, Pyridoxamine 5'-phosphate oxidase.	3.03297e-18
CP019066.1\|AUN39382.1\|936030_936855_+\|oxidoreductase	gnl\|CDD\|381357	cd19131, AKR_AKR5C2, Escherichia coli 2,5-diketo-D-gluconic acid reductase A (DkgA/YqhE) and similar proteins. Escherichia coli DkgA/YqhE is a founding member of aldo-keto reductase family 5 member C2 (AKR5C2). DkgA/YqhE (EC 1.1.1.274), also called 2,5-DKG reductase A, or 2,5-DKGR A, or 25DKGR-A, or AKR5C, catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG). It is also capable of stereoselective -keto ester reductions on ethyl acetoacetate and other 2-substituted derivatives.	3.33725e-153
CP019066.1\|AUN39375.1\|929239_929668_-\|hypothetical-protein	gnl\|CDD\|350298	cd18731, PIN_NgFitB-like, VapC-like PIN domain of Neisseria gonorrhoeae FitB and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Neisseria gonorrhoeae FitB toxin of the FitAB toxin/antitoxin (TA) system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. In N. gonorrhoeae, FitA and FitB form a heterodimer: FitA is the DNA binding subunit and FitB contains a ribonuclease activity that is blocked by the presence of FitA. A tetramer of FitAB heterodimers binds DNA from the fitAB upstream promoter region with high affinity. This results in both sequestration of FitAB and repression of fitAB transcription. It is thought that FitAB release from the DNA and subsequent dissociation both slows N. gonorrhoeae replication and transcytosis by an as yet undefined mechanism. The toxin M. tuberculosis VapC is a structural homolog of N. gonorrhoeae FitB, but their antitoxin partners, VapB and FitA, respectively, differ structurally. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.57438e-53
CP019066.1\|AUN39379.1\|932576_933830_+\|divalent-metal-cation-transporter	gnl\|CDD\|234815	PRK00701, PRK00701, divalent metal cation transporter MntH.	4.0042e-152
CP019066.1\|AUN39380.1\|933951_934470_+\|hypothetical-protein	gnl\|CDD\|379513	pfam14230, DUF4333, Domain of unknown function (DUF4333). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 140 and 255 amino acids in length. There are two completely conserved C residues that may be functionally important.	4.98892e-10
CP019066.1\|AUN39391.1\|945761_946040_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	3.90657e-05
CP019066.1\|AUN39390.1\|945146_945758_-\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	4.58834e-09
CP019066.1\|AUN39377.1\|930066_931671_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	1.50657e-10
CP019066.1\|AUN42832.1\|942476_943592_+\|hypothetical-protein	gnl\|CDD\|277331	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.10714e-71
CP019066.1\|AUN39376.1\|929664_929913_-\|hypothetical-protein	gnl\|CDD\|172484	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional.	1.66368e-12
CP019066.1\|AUN39373.1\|927480_928773_+\|citrate-(Si)-synthase	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0

>CP019066.1|AUN39382.1|936030_936855_+|oxidoreductase
MTVPNVKLNNGTSIPQLGFGVWQVPDDGARDAVAEALRVGYRSIDTAKVYENEAGTGRAIAESGLARDEVFLTTKLWNSDQGLDETLRAFDASLERLGTDYVDLYLIHWPVPEYDRFVDTFKAFQQIRDSGRAKSIGVSNFRVEDLRRVIDETGETPAINQIELHPGLPQDELRAFHAEHGIATEAWSPLGQGESLTDAAVVEVAAAHGVTPAQAILRWHLQLGNVVIPKSVTPARIAENFDVFGFTLSDDEVARISAIEGKRIGPDPAVFNLH
>CP019066.1|AUN39381.1|934470_935979_-|acetyl-CoA-carboxyl-transferase
MAITAQDLIDAILDRGTFTSWDGPLPDVAPDAEYAAALQRARERSHHDEAVITGEGRIRGQRVALIACDFGFLGGSIGVAAAERIVTAVERATALRLPLLATPTSGGTRMQEGTVAFLQMVKISAAITLHKQSGLPYLVYLRDPTMGGVFASWGSLGHVTIAEPGARIGFLGPRVYEALRGEPFPDGVQTAEHLFERGLIDGVVPLRFVRLLAHRTLRVLAGAQDADPLAPHLGVREELAAADDDTPAWDSVRISREPGRPGVRAFLRHSATDRLPLSGTGEGETDHTLLLSLARVQGYPCVVVGQDTTRADGAAPPLLGPAALRAARRGMRLAAELNLPLVLVIDTWGAALSPEAEEGGLAGEVARSLSDLVTLTVPTVSVLLGQGTGGGALAMLPADRVLCAQHAWLAPLPPEGASAVMYRDAEHAAEMAERQRIRAADLLEDGVVDRVIPERPNAADEPTEFSRRVGLAVSDALAELSLIPDSIRISRRLDRYRFLGGR
>CP019066.1|AUN39380.1|933951_934470_+|hypothetical-protein
MRAVAVVVGGAGVAIAACWTMLSPTEVAQDQVESGTLAQVAAAPSDHLHCDGGLEAEVGAAQSCVLHRGGEEFAVQLRVTDVDGDRVHWDSTVSGVPRSGPRVAVGELEQRTREVLARERRVDAVTCEGGLAGTVGARQTCAMTASGHRHDVTVTVTTVDPARVQWGVTVGK
>CP019066.1|AUN39379.1|932576_933830_+|divalent-metal-cation-transporter
MLTDTAAPTKQPPVRALMLLGPAFVAAIAYVDPGNVAANVTAGAKYGYLLVWVLVLANVMAVMIQYQSAKLGVVTGRSLPQVLGDRLPRRSRLAFWGQAELVAAATDIAEVIGGALALNLLFGVPLVWGGLIVGVISTVLLVLADGRRQYRFELVIIGMLAIIVVGFLAGLIVAPPDGAAVLGGLVPRLQGTETVLLAASMLGATVMPHAIYLHSALVVDRHGAPPAEGAVERARRLLKVTRVDVVLALIIAGAVNIALLVLAASSLYGREGTDSIEGAHAAVRDALGPVVAGLFAVGLLASGLASTSVGSYAGGTIMAGLLRKRIPVVVRRLITMIPAIGVLAIGVPPTEALVISQVVLSFGIPFALLPLRRFTADRALMGEFADRAPLRWASAAAGALIVALNVALIYLTVTGAG
>CP019066.1|AUN39378.1|931687_932488_-|pyridoxamine-5'-phosphate-oxidase
MTTRDHGDPGDAPTIAPPLTDVAEPRRPSAAEEARTVAASTNTATLGSLSSDGGPWASLVTYGLLGGDPVLCVSHMAEHGRNLARDPRASVSIVAPDASSDPLANARITLAGTVRRPEGEQLAAAREAHLAAVPAAKYYIDYSDFTVWLLEVERVRWVGGYGRMDSASRADYAAAQPDPVTPHAAGAVRHLNDDHAAALLDMARQLGGYPDATAARCERADRYGLDLRVDTPRGWAVTRVGYREPLGAPAELRQATVALARLAAGR
>CP019066.1|AUN39377.1|930066_931671_+|hypothetical-protein
MKAGTAAVAVLSVAGLLAGCGKDAASDDSPVAFSPVTGDQYTENPGAFQTDGVVVPPKDVIMVGDPIPAQAAVNAGLPQGTITSTTNNTTVYYPPPPAVPGLAVAPQVAPPAPLSRPANTRPWQYTQPQIDAYRAICETGRWGSWIAGVEAQTQTCWTLYGRQLGVRPWTPDQPRPWHRPDYPRPWFDPGFRADVPIIWVYPRNWTRPRPQPIISVSITINIVSNPYRRVPPRFTDPYYPVWAVTPGRVVDVRDQGRILAPVYTVTSTTTTTTTTTVTAPVAPGVVLQPLPTSARITPLVALPGQAVPGNVNTDPAVTAPVAAALQGATVQAGSRSSVEDAIGTSVSVAVASPTTTAPRAGDATGTTTAGTSAAAGAGTTQGGTVTRPTGTSPAAPTATSGTSPQTIPPTTAAPTVPPTTITPPTVAPTTQAPTAAPTTVAPPVTVAPPTTTVAPKPTVAEPAPTTPPRVTPPATTQAPVVTPPPTTQAPVITPPRITTTVAPVPTTTVAPKPVAPKPTVAVPVPTTTTTPPPN
>CP019066.1|AUN39376.1|929664_929913_-|hypothetical-protein
MATLTIRNLPDHVRDRLRVRAAENGRSMEAEARMILEESLVEPGKVDLSWVEAFIEIGQKYGPIELPIPPREVEPFKTFDEL
>CP019066.1|AUN39375.1|929239_929668_-|hypothetical-protein
MIILDTNVLTALMQVENTERRVERWLRGVAEQSTVTSITRAEILSGIALLPRGNRRTALRDAADRAFASFPEALSFDHSSAAECAAVLEIRKAAGRPISVQDAMIAAIARQTGAGLATRNTKDFDGLGLRLVDPWTAGPTGA
>CP019066.1|AUN39374.1|928824_929184_+|peptidylprolyl-isomerase
MTKPEIEFIEGPAPSELVIKDIVVGDGAEAQPGSVVDVHYVGVEFDSGEEFDSSWSRGESINFPLRSLIAGWQEGIPGMKVGGRRQLICPPALAYGPAGGGHRLSGKTLVFVIDLLGVK
>CP019066.1|AUN39373.1|927480_928773_+|citrate-(Si)-synthase
MSTDDNTANATVAYPGGQIELPIVKATEGADGIALGKFLAQSGYSTFDNGFVNTASCKSAITYIDGNAGILRYRGYPIEQLAEKSTFIEVSYLLIHGELPTPEQLAEFTAKIQRHTLLHEDLKLFFNGFPRNAHPMPVVSSAVNALSAYYPDSLDHNDPAQVELSTIRLLAKFPTICAYAYKKSVGQPFLYPDNSLSLVENFLRMTFGFPAEPYEVDPEIVKALDMLLILHADHEQNCSTSTVRLVGSSNANLFTSISGGINALWGPLHGGANQAVLEMLDDIKASGGDTTAFMNKVKNKEDGVKLMGFGHRVYKNYDPRAAIVKQTADRIFELLGVSDELLDIAKGLEDVALHDDYFIERKLYPNVDFYTGLIYRAMGFPTRMFTVLFALGRLPGWIAHWREMHEDPTTKIGRPQQIYTGSTARDYPGA
>CP019066.1|AUN39383.1|937494_938595_-|pyridine-nucleotide-disulfide-oxidoreductase
MKDVVVVGAGQAGLSAAYFLPRFGIENSIVLDHNAGPGGAWRQRWPSLTLRSANHVHDLPGWGLQDALGTECDDIPAATGVAQYFGEYEKRFGIDVHRPAHVASVSRCDGGYLVAGHGADGPFEYRAAAVINCTGTWDRPFWPTVAGAPSFRGTQLHAHDYRTAEPFAGKRVAVVGAGITAVQLLLEIAEVAETAWFTRREVQWDTTPFDPDKGRRAVARVEERVRAGLPPGSVVSVTGLPMTDAMRRGIEAGVLVRRPMFASLSPDGPLLADGTLVPADVILWCTGFRYSMDHLAPLNLRSPGGGIVMTGRLATEVAGEPRLHLLGYGPSASTIGANRAGREAARAIAEVVGGPGSGRVRETPLA
>CP019066.1|AUN39384.1|938618_939353_+|enoyl-CoA-hydratase
MIGYTLEEKVAVIEFQRPEARNALNPEIMDGLEAAFDRAEADGVFVIVLTGQGTVFSAGADLRSGAVLDKNFMERVIRFYRRVEAMKQILVAAVNGPAVGAGVQMAMLADLRVLDPSATIAIPAAKLGVTIDKWTLRRLEDLVGGGHARGVLMAAQKIGAEKLLDLGFANAIGDREAALEFARGVAGLAPLSLQNYKALFKSDVAVEPLTEAEEARLHAVWDSEDLKEAIMARIEKRDPRFQGR
>CP019066.1|AUN39385.1|939354_940455_+|MBL-fold-metallo-hydrolase
MRLGTVVTFAAGAAAGIAGAAGLRAADGLKRSMGAQVDTVYTNTDPDSPHQRFDAAKIARGVVGRARHGLGAPSRPIPLAADPSPEQASDLAVTWFGHSSVLIEVDGFRILADPVWGERVSPSPTIGPARLHPVPVALSALPHIDAVIISHDHYDHLDLPTIDELTRDRDVPFCVPVGVGGHLRAWGVPEDRIVELDWDQAHTLTRDGRSVKVVCTEARHFSGRGLTRNSTQWASWSLVGPEHAVFFGGDTGFTERFKLVGDHFGPFDLTLLPIGAYDPLWPDVHTNPEEAVAIHAMIAKPGAPLVPVHWATFNLAFHDWSEPVERLLAAAEEAGVATIIPMPGGRVDGAGGAITPGTGDWWSTVR
>CP019066.1|AUN39386.1|940465_940672_+|hypothetical-protein
MDFKDLANKAKDALGKNPNIIDKAGDFIDGKTDGKYSAQVDKAQDAAKKFAGGQQGQQDQQGPQGQQQ
>CP019066.1|AUN39387.1|940702_942283_+|hypothetical-protein
MGRHDAPGESAPEKPRGRNLARLLLGAGLVAILVAGIVAIVGGKFAGCGATNTVTVMADPALAAAARSQASLASDRCTTIAVTEAPDRESAGRLAGGGADLWLAPSRLRADAVSAQLGRELPTTVVAGSPIVLAGTAIPQPASWSEVMTQATIRAVPADSPYADAPVAAAVAESSRPGAGDDQALNAVLAQYAQAAKRVSGEPVAAAATDGGVVAVPEYAYLAEKKGRGELAAVVPKTGAPRDELLLAVAATGDRKAAATAAGERLTKAFTSADGLTALARDGLRGTALAEAPSGGVGAVTALPDPDRARLARAEQTYSTLAVPLKALVVVDTSGSMNEKVGDTTRIGMLASGFTKVVTQIPDANAVGLWTFALATNGGKDWTEVVPTARLSDKRGPTTQRQALLDGVNSLPGRVRGGTGLYDTTLAAYRQAVKDFDPAYSNSLILLSDGGNEKNGGTTLDELVAELKKLVDPARPVNIHTVGISKDADLPALKKIADATGGTAQSADTEQQMLADFVNAVAKRAK
>CP019066.1|AUN42832.1|942476_943592_+|hypothetical-protein
MVTLGSLALVQWRVVRGWSSRAVRITGTIAVVVAALLTLAAPVGLLAGNGRIDPDRVRWISAAGLTWLATVFYLLLTLLVLGVLWVLTRLVRLVRPGFDGAPLRRVVALVGVVGAVAATLYGLVEAATPRVTHTQVKLASMPAAFGPLKVALITDIHAGPVRTRGFVQGVVDRANAERPDLVLMAGDLIDGTVAQIGDDLTPLRDLRAPLGVFAVTGNHEYYAGDVVNWVQRWRDVGVTPLTNASARLERGGATVTLVGANDRTGKAPHEVDYDAAFAGVDPAGFTVAIAHEPLQGREFAKRGADLQVAGHTHGGQIWPFRYFVRLQQPALQGLESVDGMPVYTSRGAGAWGPPVRVAAPPEIAILELTAA
>CP019066.1|AUN39388.1|944056_944500_-|ribonuclease-HI
MADEIVIYTDGACLGNPGPGGWGAVLRFGEHQKELYGAEKDTTNNRMELMGAISALEAITRPMPVVLYTDSSYVKNGITKWIAGWKRNGWKTSAKQPVKNAELWQRLEQAAAQYEIDWRWVKGHAGNEGNELADQLASRGAQEARDS
>CP019066.1|AUN39389.1|944537_945137_+|pyridoxamine-5-phosphate-oxidase
MPNNHYHHLVFGDDALDRQRRNGSYVAYGRQLERGDDGPQALTDRELLMITRADQFCLATVTPQGWPYLQYRSGPAGFVQHDPATGRLGFIDVPGNNQFVTLGNLADDDRLAMFFVDYPRRVRLKVFGRGTVRETEDRRVIEIAVEAYDWNCQRSIIPRFDREYLKQLGEAYQKVAAEREAELQAEIDRLRARVAELEG
>CP019066.1|AUN39390.1|945146_945758_-|hypothetical-protein
MDRGPALLLGAVLLDRARRSAPAAAAPAAPQAPQLPASPFGPAAQIPGAPQPSAPRPSAAQQPGAPQPGPPMAPGAPMPPAPLPHAAPAPSNQQFPQADPTWARPVPPPMPAHTPPPLPAPAPAPAPDEHTRTAVAPVARRRPQPDWDRDWPGTVPPKPGPVTPSEQHTQVVKRPPRPVRVSPKPETEALPRRDPRFDSPTQP
>CP019066.1|AUN39391.1|945761_946040_+|hypothetical-protein
MGGPTEAAVSTCRVKPPTDTGCEPTGTSCAYSPRAAPRTPQASAPQAPTARHVAGPKAAADAATTAATASAMAAQPPQATSFGTDEETSRLS

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Crispr_ID: CP019066_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019066_3

1650308-1650400

Orphan

Consensus_repeat	Method
CGTCAGCCGCCGGGCCGGACGATGCCGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019066_3

>merge|CP019066|3|1650308-1650400|CRISPRCasFinder
CGTCAGCCGCCGGGCCGGACGATGCCGTGGTCGGGGGCGAAGACCGGGCCCCGCCCCGGCGGACCGTCAGCCGCCCGGCCGGACGATGCCGTG

>CP019066|3|3|1650308-1650400|CRISPRCasFinder
CGTCAGCCGCCGGGCCGGACGATGCCGTG	GTCGGGGGCGAAGACCGGGCCCCGCCCCGGCGGAC
CGTCAGCCGCCCGGCCGGACGATGCCGTG

Protein	Signature genes	Signature genes Name	Protein_function
CP019066.1\|AUN39973.1\|1661405_1662206_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181723
CP019066.1\|AUN39960.1\|1645658_1645934_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378834
CP019066.1\|AUN39969.1\|1655837_1656629_-\|carbon-nitrogen-hydrolase	unknown	unknown	gnl\|CDD\|143600
CP019066.1\|AUN39961.1\|1645939_1646326_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215485
CP019066.1\|AUN42910.1\|1648827_1649403_-\|Fe-S-cluster-assembly-protein-HesB	unknown	unknown	gnl\|CDD\|132296
CP019066.1\|AUN39958.1\|1643763_1644564_+\|DNA-glycosylase	unknown	unknown	gnl\|CDD\|223344
CP019066.1\|AUN39971.1\|1658058_1659039_-\|agmatinase	unknown	unknown	gnl\|CDD\|212538
CP019066.1\|AUN39962.1\|1646378_1647179_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237865
CP019066.1\|AUN39972.1\|1659734_1661354_-\|23S-rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|180854
CP019066.1\|AUN39967.1\|1652620_1654117_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
CP019066.1\|AUN39957.1\|1643265_1643748_+\|ribose-5-phosphate-isomerase	unknown	unknown	gnl\|CDD\|235509
CP019066.1\|AUN39974.1\|1662215_1662977_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380379
CP019066.1\|AUN39964.1\|1648162_1648831_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237865
CP019066.1\|AUN39966.1\|1651038_1652241_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226951
CP019066.1\|AUN39970.1\|1656625_1658062_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
CP019066.1\|AUN39963.1\|1647183_1648098_-\|homoserine-O-succinyltransferase	unknown	unknown	gnl\|CDD\|235433
CP019066.1\|AUN42912.1\|1659135_1659738_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
CP019066.1\|AUN39968.1\|1654113_1655814_-\|amine-oxidase	unknown	unknown	gnl\|CDD\|366721
CP019066.1\|AUN39959.1\|1644646_1645642_+\|PE-PPE-domain-containing-protein	unknown	unknown	gnl\|CDD\|369775
CP019066.1\|AUN42911.1\|1649503_1650295_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181008

Protein	Function_ID	Function_description	E-value
CP019066.1\|AUN39973.1\|1661405_1662206_-\|enoyl-CoA-hydratase	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	1.41251e-172
CP019066.1\|AUN39960.1\|1645658_1645934_+\|hypothetical-protein	gnl\|CDD\|378834	pfam12277, DUF3618, Protein of unknown function (DUF3618). This domain family is found in bacteria, and is approximately 50 amino acids in length.	2.09637e-08
CP019066.1\|AUN39969.1\|1655837_1656629_-\|carbon-nitrogen-hydrolase	gnl\|CDD\|143600	cd07576, R-amidase_like, Pseudomonas sp. MCI3434 R-amidase and related proteins (putative class 13 nitrilases). Pseudomonas sp. MCI3434 R-amidase hydrolyzes (R,S)-piperazine-2-tert-butylcarboxamide to form (R)-piperazine-2-carboxylic acid. It does so with strict R-stereoselectively. Its preferred substrates are carboxamide compounds which have the amino or imino group connected to their beta- or gamma-carbon. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), class 13 represents proteins that at the time were difficult to place in a distinct similarity group. It has been suggested that this subgroup represents a new class. Members of the nitrilase superfamily generally form homomeric complexes, the basic building block of which is a homodimer. Native R-amidase however appears to be a monomer.	8.46599e-119
CP019066.1\|AUN39961.1\|1645939_1646326_+\|hypothetical-protein	gnl\|CDD\|215485	PLN02895, PLN02895, phosphoacetylglucosamine mutase.	0.00945906
CP019066.1\|AUN42910.1\|1648827_1649403_-\|Fe-S-cluster-assembly-protein-HesB	gnl\|CDD\|132296	TIGR03252, TIGR03252, uncharacterized HhH-GPD family protein. This model describes a small, well-conserved bacterial protein family. Its sequence largely consists of a domain, HhH-GPD, found in a variety of related base excision DNA repair enzymes (see pfam00730). [DNA metabolism, DNA replication, recombination, and repair].	4.82359e-82
CP019066.1\|AUN39958.1\|1643763_1644564_+\|DNA-glycosylase	gnl\|CDD\|223344	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair].	1.45629e-69
CP019066.1\|AUN39971.1\|1658058_1659039_-\|agmatinase	gnl\|CDD\|212538	cd11592, Agmatinase_PAH, Agmatinase-like family includes proclavaminic acid amidinohydrolase. This agmatinase subfamily contains bacterial and fungal/metazoan enzymes, including proclavaminic acid amidinohydrolase (PAH, EC 3.5.3.22) and Pseudomonas aeruginosa guanidinobutyrase (GbuA) and guanidinopropionase (GpuA). PAH hydrolyzes amidinoproclavaminate to yield proclavaminate and urea in clavulanic acid biosynthesis. Clavulanic acid is an effective inhibitor of beta-lactamases and is used in combination with amoxicillin to prevent the beta-lactam rings of the antibiotic from hydrolysis and, thus keeping the antibiotic biologically active. GbuA hydrolyzes 4-guanidinobutyrate (4-GB) into 4-aminobutyrate and urea while GpuA hydrolyzes 3-guanidinopropionate (3-GP) into beta-alanine and urea. Mutation studies show that significant variations in two active site loops in these two enzymes may be important for substrate specificity. This subfamily belongs to the ureohydrolase superfamily, which includes arginase, agmatinase, proclavaminate amidinohydrolase, and formiminoglutamase.	1.82598e-151
CP019066.1\|AUN39962.1\|1646378_1647179_+\|hypothetical-protein	gnl\|CDD\|237865	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional.	0.00965455
CP019066.1\|AUN39972.1\|1659734_1661354_-\|23S-rRNA-methyltransferase	gnl\|CDD\|180854	PRK07121, PRK07121, FAD-binding protein.	0
CP019066.1\|AUN39967.1\|1652620_1654117_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	2.33378e-70
CP019066.1\|AUN39957.1\|1643265_1643748_+\|ribose-5-phosphate-isomerase	gnl\|CDD\|235509	PRK05571, PRK05571, ribose-5-phosphate isomerase B; Provisional.	4.23292e-85
CP019066.1\|AUN39974.1\|1662215_1662977_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|380379	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain. This family contains mostly bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included in this family is Escherichia coli HTH-type transcriptional regulator NimR (also called YeaM) that negatively regulates expression of the nimT operon and its own expression. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	5.29274e-34
CP019066.1\|AUN39964.1\|1648162_1648831_-\|hypothetical-protein	gnl\|CDD\|237865	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional.	0.00264401
CP019066.1\|AUN39966.1\|1651038_1652241_-\|hypothetical-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.11554e-29
CP019066.1\|AUN39970.1\|1656625_1658062_-\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.73587e-147
CP019066.1\|AUN39963.1\|1647183_1648098_-\|homoserine-O-succinyltransferase	gnl\|CDD\|235433	PRK05368, PRK05368, homoserine O-succinyltransferase; Provisional.	0
CP019066.1\|AUN42912.1\|1659135_1659738_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	9.02538e-15
CP019066.1\|AUN39968.1\|1654113_1655814_-\|amine-oxidase	gnl\|CDD\|366721	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase. This family consists of various amine oxidases, including maze polyamine oxidase (PAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.	1.17821e-44
CP019066.1\|AUN39959.1\|1644646_1645642_+\|PE-PPE-domain-containing-protein	gnl\|CDD\|369775	pfam08237, PE-PPE, PE-PPE domain. This domain is found C terminal to the PE (pfam00934) and PPE (pfam00823) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands.	5.87798e-12
CP019066.1\|AUN42911.1\|1649503_1650295_+\|enoyl-CoA-hydratase	gnl\|CDD\|181008	PRK07509, PRK07509, crotonase/enoyl-CoA hydratase family protein.	4.90913e-99

>CP019066.1|AUN42911.1|1649503_1650295_+|enoyl-CoA-hydratase
MSNIDYEVRDEVAHVRINRPEKHNGLTLDMIDDLAKAADRAKNDRSLRAVILSGEGSSFSSGLDFASAGKEQRRLLMNFVPKRISAANNFQAAGWAWRSVPAPVIAVVHGHCYGGGLQIALGADFRYASSEADFSILEAKWGLIPDMSISASIAQLTTIDVAKRLTMTGEMFSAKQALDWGIVTGVSADPMKDALELVDKLKERSPDAVAASKALFENTWYSGSRLSFPVEQALQLGLIRGKNHVIARTAAANKEKPAFIERQ
>CP019066.1|AUN42910.1|1648827_1649403_-|Fe-S-cluster-assembly-protein-HesB
MAVTLHITGEPESDAVLSEHPFALLAGMLLDQQFPMERAFAGPWKVLDRFGSIDPRDIAVADPVRFEELCTTPPAIHRYGRAMAARLQALAQIVVDEYDGQAERIWTEASSGADLVKRIEALPGFGAQKAKIFAALVGKQLGVKPRGWATAVGDYSKAGYRSVADVVDGESLQKVRAYKKEMKAAGKKAGA
>CP019066.1|AUN39964.1|1648162_1648831_-|hypothetical-protein
MTGPGPYGGQNPNQPGQAYSQAIPLPPPPRGPAAPNPVPGGAPPPPQKPSSGRNVIVALVAVASVVALIAAIVVAALLSDSNGADPGKDTASATTGAGAVFRINDCLYDVPEAPKVGNCDDGGSPYKVTQVMQPGEKCRAEQTSIARGRWYCLTPNLNVNYCYTAPVPGTWIKAAGQCGAPGTITVVSVVGGLKDSGRCSGEWDRSYFFDDPVYTICAKSYT
>CP019066.1|AUN39963.1|1647183_1648098_-|homoserine-O-succinyltransferase
MPVTMPHDLPARAVLAAEQVFVMSDDRAGHQDIRPMRIAILNLMPMKVTTETQLLRLLSNSPLQIEVTLLRMASHVSRTTASEHLDSFYSTFDDVAEQHFDGLIITGAPVERLDFEAVDYWPEMTRILDWTRTNVQSTLHVCWGAQAALYHHYGVGKHELPQKLSGIYPHRLTAARSPVVTGFDDEFLAPHSRHTDVDAADVDATGDVAVLAVSDEAGVYLAASRDGRQVYVTGHPEYDADTLAREYARDSEQGLPVAPPAHYFPGDDPARLPRNRWRGHGNLLYSNWLNYCVYQETPFDPDGA
>CP019066.1|AUN39962.1|1646378_1647179_+|hypothetical-protein
MEFPKALLAPARVGLAAAGLGLAAAETSVGLARDAVSMAADKIDPGSGGGTRHENLITAAQRVPHIVHRVSDLLSDDGAIHRVVGPGGAADRVADLFDEGGPVDRVIRPDGPLDRATREGGIVDAFTAEDGVVQKLAEVTEAMNKLTPTIAAMGQRLGDIENVVGAANTVAEPVTDLLSSLPKFALRTASEVAKAAQPRQPRPARVTAAPSVAVPPAVVAPAVAPPAVVVVPVIDAETTEADATDGRAEPAAPEPRGDDGAAPAQS
>CP019066.1|AUN39961.1|1645939_1646326_+|hypothetical-protein
MERTNRGGAGTGAALVVSALLAAGCGGPAAAPVALPATFPVQQVPVIGEIRKAETIEVGHAMWRVTVEGRDTVAAARALLAAGLAPVAPGVPLDAGRIGAVYRGHGYTVGISANDGDVTYVVSPTPGA
>CP019066.1|AUN39960.1|1645658_1645934_+|hypothetical-protein
MARDTESIERDIERAREQLAATLDQLGERADPRKLAEQAQQSVIATVTKPPVLAAAAGVAVLAALVIGSRFKRARREKQLIRAIAEGKISL
>CP019066.1|AUN39959.1|1644646_1645642_+|PE-PPE-domain-containing-protein
MNTLTVHSRAARRPADAGRARITVLAVGGTGESWIDDPRTEVTGMLSHVVAELDDRFGSRWVGYPASYGPVPARDGVSFAESVSIGVERLLAAIADADGPVALIGYSQGCTVVRRVLGAMADGPVFAPHVLAVGLISDPERPHGSDPSLCGSGVAGDGPSVPDGLPLHWISHPQDVICNASVDSFVRDIADATAYLTLRDLATWAPRAAGEYLGHRFQNATRTAFGSRQWRRDVNRLRTAGREILGYLPRVQYRGRDYNLRGNRHTAYATEPLARLRHEDYELTGCQMLAQWLQVQATFALPAEPDRGARAPQSGAPAAAGLESGKYLQAG
>CP019066.1|AUN39958.1|1643763_1644564_+|DNA-glycosylase
MPEGHTLHRLALAHDALFAGEGVRVSSPQGRFAPEAKRLDGRVFERADSWGKHLWHRYNGGLIVHVHLGLYGAFTDFGVSDGAPAPVGQVRYRIVGPRGGTDLRGPTACELVTEEQVDGVLARLGPDPLRPDSDPEDAWRRIERSRRPVGALLMDQKVMAGVGNVYRAEVLFRAGIDPHREGRDVSRAEFDGIWADLVALMPIGVERGRMHVVRPEHDHGAPSYAEDRPRTYVYRRTGDPCRVCGTPVRTEVMEARNLYWCPTCQS
>CP019066.1|AUN39957.1|1643265_1643748_+|ribose-5-phosphate-isomerase
MRVYLGGDHAGFELKSQIARHLTAAGHEVVDCGAHTYDALDDYPAFCIDAAKRVVADPGSLGIVLGGSGNGEQIAANKVPGARCALAWSVETAQLARQHNNAQLIGIGGRMHTADEALAIVDAFLATPWSDEERHQRRIDILAEYERTGVAPAVPGAPEA
>CP019066.1|AUN39966.1|1651038_1652241_-|hypothetical-protein
MHTMRWLRWLEARYRRDFELLGYEYPPYYMTITEVAMLALVIEAAVPRLLEGPEGRQWIWLTGAIVLSLCHTAASLMRKGGVSLTAHSIVILTTASLFWCVPTTFDVVPLIVILGITQVAAVTPPRVTVAHLVAYLAVVIAAGLLGAIHQAWLIALTVCFGAAVGQLLQNQLLLLRAERDAQASRSALDRATIAGEVHDVVAHSLAVVLLNVTAARRALESDDARDEAVDALRDAETQGRAAMKDIRTTIELLRTDGAGSAQPGLADIPELVASFERAGLAVDLEHRAPSTDLTASAGLAAFRVVQESLANAVKHAPGARVAVSVAPGAGGRLGVRVSCPVPDGVRRAPGGSGLTGMRARVESAGGTLTTGPVDGTWLVDATFPSGTVTGPRCSTGGDRP
>CP019066.1|AUN39967.1|1652620_1654117_+|cytochrome-P450
MTTITRAFRSGIGSGLGGTVARTLSIPEPAWHLRESARPGVDGGNGDEAGPVDPAGAAALRAAPSLPMGPLRASLSYTLREGDVTFRAAERYGDVFRSEFAGGPGQVVLVSNPAHIASLMSRPDDAPSATRFSPLRPIVGPDSVLTAVGPRHKQQRGLLLPQFHGRAVTEYQRRIDAATTHRIDDWRTGEPVALADIGQQITLDVIMSAVFGIEDEAGATAAESAVRTSMIRLLQLSTHPLATAVQLVNARSPEPRGVLKMILRPLDRAIYAVIAERRREGADGADGAGRSDILTVLMAARGDDGAPLADSEIRDELLTLVLAGHETTSNSVAWTFERLTRNPEAYRRSVEAARAGDEAYIEALINESMRSRPVVPVVAREMLSDWRFGPYVVERGVIALVSILLLHHREDLYPRPFAFDPERFLGVKPSPQKLMPFGGGTRRCLGAGLAMAELRAVVTQILLRVDLAMTDAPAEQPRHRNVTMIPGNGGVVTALAKR
>CP019066.1|AUN39968.1|1654113_1655814_-|amine-oxidase
MTQPAMPAHGPSASDAPLTMFGPDFPFAYDDWVAHADGLGAVPDAVRGTEVAVIGAGLAGLTAAYELARIGLKPVVYEADRIGGRMRSERFDGYADDLVAEMGAMRFPPSSTTLQHYLDLAGLRTEPFPNPLAETTPSTVIDLKGHSYYARTTADLPPEFAEVARAWDATLADYADAAELQDAIRARDVPRIRAVWSRLVEELDDQTFYGFLTASEHFRSFAHRELFGQVGFGTGGWDTDYPNSMLEILRVTCTAADDEHRGIVGGADRLPKHLWESPFDGARSVRDLNGGEHRPAVTAIRRTAGPGGAPAYTLTDAAGETRTYPAAVFTGQAWMLLNTIDCDDDLLPIDHWTAVERTHYMGSSKVFALVDRPFWRDVDPATGRDTMSMTLTDRMSRGTYLLDHGPDRPGVICLSYTWSDDSLKVLPLDVNARLDLMLKSLGEVYPGVDIRSHIIATPKTVSWETERYFMGAFKANLPGHYRYQERLYTHFMQESLDPRHRGFFLAGDDISWTAGWAEGALQTALNAVWGVVHHLGGSAPSTNPGPGDVFADIAPVRLGDERGTRA
>CP019066.1|AUN39969.1|1655837_1656629_-|carbon-nitrogen-hydrolase
MTVTVAMYQGPEGLGPEPDVARNLAAIDGAAARAAESGAHLLVTPEMSVTGYDIGAEVARLALPRGGEYHDALTAIASRHDLTVVGGYAERDGDRVFNAATVVAPDGTELAHYRKTHLFSDLDRNAFAPGDELPVTFPLGGLTCGLLICYDVEFPEAVRAHAEAGTDLLLIPTGLMEPFGRIAEQVVPVRAFESQLYIAYTNHCGRETSLEYCGLSTAAGPDGDVVAQAGRDERLLTFTADPEALREARLVNTYLRDRRTDLY
>CP019066.1|AUN39970.1|1656625_1658062_-|amino-acid-permease
MSTFTESLFARKSVDRILADSAAAHDGPQLKRSMGLGHLTALSIGASLGTGIFVILGEATPKAGPAVIVAFILAAVTALFSALSYAEMAGTIPVSGSSYSYAYATIGEFFAWICGWCLLLEYGVSVAAVAVGWGQYINELLRTLFDVELPTAIAAPPGDGGIVNIPSMVIVALACIVLVGGATESARLNTAMVVLKVCVLVFFCAIAFTAFESGNLSPFMPFGTHGMTAAAAMVFFSYIGFDAASTAGNEAKNPTRDLPRAIILSLGIITVLYCLVALAAVGAMPWQEFGGSEASLAKILTDVTGQTWPSVILSIGAVIAIASVVLAVMYGQTRILYTMGSDGLVPRVFAKVNPRTFVPVRNIVIVSVVIAVLAGLVPLGELANATSIGSLFAFALVNVGVILLRINRPDLPRAFKTPLFPLIPVLGIGFCGYLMLQLEARTWIAFAVWSAVGLVVYFVYGYQHSRLRQDVDLAKDAR
>CP019066.1|AUN39971.1|1658058_1659039_-|agmatinase
MSDETQRPSQPRGPVDASLVPRYCGPETFARLPRLDQVDGAAVAVLGIPFDSGVSYRPGARFGPGHIRASSKLLRPYNPALDVSPFAVHQVADAGDLAVNPFDIVEALGTVEAEITRLRGAGSKVLTLGGDHTLALPILRAVAADRGPVAVLHFDAHLDTWDTYFGAPFTHGTPFRRASEEGLIDLERSMHIGIRGPLYGEQDLTADGVLGFQVVRSDDYENDGLASVIERMRRRLAGPDGAGGPVYVSVDIDVLDPAHAPGTGTPEAGGMTSRELLNTLRALVGTDVVGADVVEVAPPYDHAELTGVAAAHVAYELLSVLAVNAR
>CP019066.1|AUN42912.1|1659135_1659738_+|XRE-family-transcriptional-regulator
MLDAAAPGADAVPAVPDQVGASLKAARRARRLTLADIAERVGVTKGYLSKVERGLAAPSMAVLVRWCEVLDVPVGSLFDGGAAGSIVRADAYPPVRFGGDGLSEFLLTPSGERRVQVLLSDIAPGGGSGDEAYALPAEVSFVLVQQGALRLAFPPEPGVELGVGDAMTFDPARPHVFAAGPDGARVLWVMAPALPAGERR
>CP019066.1|AUN39972.1|1659734_1661354_-|23S-rRNA-methyltransferase
MAQDWDATADVVVVGYGGAGAAAALAARESGADVLALDRYLGGGATNLSGGIVYAGGGTRIQRAAGVEDDTENMFSYLRREVGDVVSEETLRRFCEQSPAMIDWLMDHGVPFDPSLCPFKTSYPTDDYYLYFSGSENSGGFRDAATPRQRGHRAHGPGVSGKKLYGPLAASAAAHGVRVRTGTRVTGLVVEDGRVVGVEAVTIEDAPSAVRRRFAVLTRISAKPGVYHQGLRAAMQRLLDRIEHRHGRPIRIRARSGVVLSTGGFIANGAMVREHAPGYPWAQGLPLGTAGDDGSGIELGRSVGGATDRMDSLSNWRFIAPPSAYLGALAVDVDGRRMVDESRYGAALGAAIAEAPGHRAWLLVDADLAARAREQLGDQTVWFQRLQLERLLRIGSVSAPTVEEAARRAGVDPAGLRRTVDAHNDAIAQGRPDPLGKPDDLRRPAVAAPFTLLDISFTDRMTYPMPMLTLGGLVVDEDSGAVRTAAGATVDGLFAAGRTAVGICSNSYVSGLSLADCIFSGRRAGSHAAAAPSGARDGA
>CP019066.1|AUN39973.1|1661405_1662206_-|enoyl-CoA-hydratase
MTEPLLIERDGPVVTWTLNDPAARNPVSDEAMIEAIERAVDAVNRDDEVRVAILTGAGSAFSSGGNVKHMRDKEGMFGGTAAQQRQGYRHGIQRIPRALYHCEVPTVAAVNGPAIGAGCDLAMMCDLRVASTKAVFAESFVKVGLIPGDGGAWLLPRIVGMARATEMALTGEAVDAATALEWGMVSSVVEPDELHAAARALADRVAANPPQALRMTKRLLREGQHQSLDALLELSAAMQTIAHSTADHHEAVAAMLDKRPPRFTGN
>CP019066.1|AUN39974.1|1662215_1662977_-|AraC-family-transcriptional-regulator
MRNVPVAALEDLPRDVLAVGTDYPDGYAQARHHHRRAQFLYAATGVMEVDTDDGAWSVPTDRAVLIPPGVPHGVRYSGVSTRSLYVEPAAAPWWPSRCTVVDVTPLLRELLLAAVDADAEYDEAGRDGAVAALLLHEIAALAPLPLHVPLPADEELRALCRDYLTAPDVAVGNAEWAARCGRSERSFTARFRAATGSSPAAWRRRARLLAALPMLRTATVTETAGRLGYATPAAFTAAFTAEFGAPPSRVRSA

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Click the colored protein region to show detailed information

Crispr_ID: CP019066_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019066_5

3607438-3607523

Orphan

Consensus_repeat	Method
ACGTCGAGCGTGCAGTCCCCCACCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019066_5

>merge|CP019066|5|3607438-3607523|CRISPRCasFinder
ACGTCGAGCGTGCAGTCCCCCACCGCCCGGAGATGCAAGGGGGACGGCTCCGGACCTACACGTCGAGCGTGCAGTCCCCCACCGCC

>CP019066|5|4|3607438-3607523|CRISPRCasFinder
ACGTCGAGCGTGCAGTCCCCCACCGCC	CGGAGATGCAAGGGGGACGGCTCCGGACCTAC
ACGTCGAGCGTGCAGTCCCCCACCGCC

Protein	Signature genes	Signature genes Name	Protein_function
CP019066.1\|AUN41610.1\|3612544_3613216_+\|hypothetical-protein	unknown	unknown	unknown
CP019066.1\|AUN41595.1\|3596245_3597535_+\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|235037
CP019066.1\|AUN41601.1\|3602643_3604062_-\|acyl-CoA-desaturase	unknown	unknown	gnl\|CDD\|239583
CP019066.1\|AUN41598.1\|3599131_3599611_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP019066.1\|AUN41607.1\|3609174_3609717_-\|hypothetical-protein	unknown	unknown	unknown
CP019066.1\|AUN41609.1\|3611859_3612540_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
CP019066.1\|AUN41606.1\|3608708_3609104_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377111
CP019066.1\|AUN41608.1\|3611229_3611793_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
CP019066.1\|AUN41600.1\|3601215_3602583_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215457
CP019066.1\|AUN41613.1\|3617080_3617335_+\|hypothetical-protein	unknown	unknown	unknown
CP019066.1\|AUN43141.1\|3617346_3617721_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350308
CP019066.1\|AUN41602.1\|3604095_3605382_-\|acyl-CoA-desaturase	unknown	unknown	gnl\|CDD\|225779
CP019066.1\|AUN41603.1\|3605633_3605987_+\|hypothetical-protein	unknown	unknown	unknown
CP019066.1\|AUN41599.1\|3599646_3601203_+\|carboxylesterase	unknown	unknown	gnl\|CDD\|365897
CP019066.1\|AUN41596.1\|3597538_3598531_+\|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl\|CDD\|224084
CP019066.1\|AUN41604.1\|3606065_3607328_-\|acyl-CoA-desaturase	unknown	unknown	gnl\|CDD\|225779
CP019066.1\|AUN41597.1\|3598532_3599069_-\|peptide-methionine-(S)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|237597
CP019066.1\|AUN41612.1\|3616077_3616803_-\|ribosomal-subunit-interface-protein	unknown	unknown	gnl\|CDD\|224461
CP019066.1\|AUN41611.1\|3613244_3615998_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
CP019066.1\|AUN43140.1\|3609717_3611121_-\|diacylglycerol-O-acyltransferase	unknown	unknown	gnl\|CDD\|274360

Protein	Function_ID	Function_description	E-value
CP019066.1\|AUN41595.1\|3596245_3597535_+\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	3.67965e-168
CP019066.1\|AUN41601.1\|3602643_3604062_-\|acyl-CoA-desaturase	gnl\|CDD\|239583	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria. These desaturases are required for the synthesis of highly unsaturated fatty acids (HUFAs), which are mainly esterified into phospholipids and contribute to maintaining membrane fluidity. While HUFAs may be required for cold tolerance in bacteria, plants and fish, the primary role of HUFAs in mammals is cell signaling. These enzymes are described as front-end desaturases because they introduce a double bond between the pre-exiting double bond and the carboxyl (front) end of the fatty acid. Various substrates are involved, with both acyl-coenzyme A (CoA) and acyl-lipid desaturases present in this CD. Acyl-lipid desaturases are localized in the membranes of cyanobacterial thylakoid, plant endoplasmic reticulum (ER), and plastid; and acyl-CoA desaturases are present in ER membrane. ER-bound plant acyl-lipid desaturases and acyl-CoA desaturases require cytochrome b5 as an electron donor. Most of the eukaryotic desaturase domains have an adjacent N-terminal cytochrome b5-like domain. This domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain the residues: HXXXH, HXX(X)HH, and Q/HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the homolog, stearoyl CoA desaturase.	4.89135e-48
CP019066.1\|AUN41598.1\|3599131_3599611_-\|N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.30813e-16
CP019066.1\|AUN41609.1\|3611859_3612540_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	4.88303e-39
CP019066.1\|AUN41606.1\|3608708_3609104_-\|hypothetical-protein	gnl\|CDD\|377111	pfam03724, META, META domain. Small domain family found in proteins of of unknown function. Some are secreted and implicated in motility in bacteria. Also occurs in Leishmania spp. as an essential gene. Over-expression in L.amazonensis increases virulence. A pair of cysteine residues show correlated conservation, suggesting that they form a disulphide bond.	1.65837e-11
CP019066.1\|AUN41608.1\|3611229_3611793_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.00974334
CP019066.1\|AUN41600.1\|3601215_3602583_-\|hypothetical-protein	gnl\|CDD\|215457	PLN02852, PLN02852, ferredoxin-NADP+ reductase.	7.49551e-141
CP019066.1\|AUN43141.1\|3617346_3617721_+\|hypothetical-protein	gnl\|CDD\|350308	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	8.10092e-44
CP019066.1\|AUN41602.1\|3604095_3605382_-\|acyl-CoA-desaturase	gnl\|CDD\|225779	COG3239, DesA, Fatty acid desaturase [Lipid metabolism].	4.06293e-39
CP019066.1\|AUN41612.1\|3616077_3616803_-\|ribosomal-subunit-interface-protein	gnl\|CDD\|224461	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis].	7.34187e-27
CP019066.1\|AUN41599.1\|3599646_3601203_+\|carboxylesterase	gnl\|CDD\|365897	pfam00135, COesterase, Carboxylesterase family.	3.33107e-87
CP019066.1\|AUN41596.1\|3597538_3598531_+\|ribosome-small-subunit-dependent-GTPase-A	gnl\|CDD\|224084	COG1162, COG1162, Predicted GTPases [General function prediction only].	7.96977e-89
CP019066.1\|AUN41604.1\|3606065_3607328_-\|acyl-CoA-desaturase	gnl\|CDD\|225779	COG3239, DesA, Fatty acid desaturase [Lipid metabolism].	1.45466e-45
CP019066.1\|AUN41597.1\|3598532_3599069_-\|peptide-methionine-(S)-S-oxide-reductase	gnl\|CDD\|237597	PRK14054, PRK14054, peptide-methionine (S)-S-oxide reductase.	1.64903e-105
CP019066.1\|AUN41611.1\|3613244_3615998_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
CP019066.1\|AUN43140.1\|3609717_3611121_-\|diacylglycerol-O-acyltransferase	gnl\|CDD\|274360	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase. [Unknown function, Enzymes of unknown specificity].	5.08792e-123

>CP019066.1|AUN41604.1|3606065_3607328_-|acyl-CoA-desaturase
MAITDIPEYAHLTEADVETLGAELDAIRRDIEAVRGESDVQYLQRTIAAQRGLEVAGRLMLLGAHKRGFWWGSAATLGLAKIIENMELGHNIMHGQWDWMNDPEVHSTTWEWDNAGTSRLWKHTHNYVHHKYTNVLDMDDDVGYKTLRVTRDQPWTPFNSGNLVYNTILMLLFEYGVAIQHLELGRAATKWKKSWFDREGFKADASDVGRKIGRQVLKDYVAAPLVGVPFGGKRGWRKALTAMITANVIRNIWTNAVIFCGHFPDGAEKFTKQDVDNETQAEWYLRQMLGSANLSGGPVIDFLSGNLSYQIEHHLFPDLPSNRLAEIGVRVRALCEKYDLPYTIGPLHVQYYKSWRTIAKLSLPDKYLRDTADDAPETASEAMFAGTEYAEPRIDERSGRRFGLKAARAAVHARRGSRRP
>CP019066.1|AUN41603.1|3605633_3605987_+|hypothetical-protein
MEQTMNTSITRRHRILTAAAGTAVAAGAVLGGLALAGTASAAPGIDPSTLQKCTAFINADGTPKPDRPNACLPVDPFTEPGLTLAQRKALVNTDSGTRAGGSAQADIAALEAKFGGK
>CP019066.1|AUN41602.1|3604095_3605382_-|acyl-CoA-desaturase
MAITDIAEYAHLTDADIEALGAELDALRREIEESRGEEDAKYIRRVIKSQRIAETAGRVFGLGAGMKGWKGKAAWAASAACLSYAKVIENNELGHNIMHGQWDWMNDPEIHSTNWEWDSASDGKFWRHTHNYMHHKYTNVTDMDDDIGYGILRVTRDQPWEPYMLFNPIYNFTLMIGFQYGKAVQHLELMNAMKAALNGGEQYANYDWEEFRSRLKVVLTKIAKQTAKDYVLFPAMAVPFTGARGYKKAASANYVANTVRDVWDHMTIFCGHFPDDAEKFTIEDIENETLPEWYLRQMLGTANFEGSDALHFITGHLGRQIEHHLYPDLPSNRYNYINSRLVEICEKYDLPYNSGPMWKQYAESWRTIIKLSLPDKYLKATVDDAPETHSNKRFYDENGKTTVVKGEIDADGNRRGLRSHVEELAAAK
>CP019066.1|AUN41601.1|3602643_3604062_-|acyl-CoA-desaturase
MAITDVGEYAHLDDADIEHLALELDAIRAEVEASRGERDARYIRGVIRAQRALEAAGRLTILGSKSRWFWAAGAGMLGVAKIIENMELGHNVMHGQWDWMNDPEIHSTTWEWDMACPGAHWKHSHNFLHHKYTNVVGKDLDVGYGVLRVTRDEQWQAKRSAQFLNNLFLGLTFEWGIALHDIELAEAIAGNKPWPQTRKQLRELGVKASRQLGKDFLLYPAISKAVGGSFGRTLSANLTANVVRNIWTYVVIFCGHFPDGAEKFTTESIVDETPGEWYLRQMLGSANISGGPAMDFMTGNLSYQIEHHMFPDLPSNRLSEIAVKVRAICEKYDIPYTEGPLLRQYYLSQRTIAKLSLPDRWLRATSDDAPETASELRFSAVRERLQHAQEAAQDRLALAQEAAHDRLAHAQENAHERLVHAREAAHAAQEEVERVGLRSAIAEAARHKVEQKRLEVEAKRSRRARRRRSGVA
>CP019066.1|AUN41600.1|3601215_3602583_-|hypothetical-protein
MKPLRVAIVGSGPSGFFAAGNLLEQDDIEVQVDVFDRLPTPFGLVRYGVAPDHPAIKSVTKIFDRTAQHENFRYFGNVEVATDIQASELAQWYDAVIYAIGASGGRRLEVDGAWLPGNHPSSDFVGWYNGHPDRRDLDVDLGVERAVVIGNGNVALDAARILVTDTDKLSGTDMAEHALDALHGSSVREVVVLGRRGAEQAAFTPSEVAELGKLPGVDVIVDPADVPAEDKERDKARPPVERNNLKQLRKLAAQEPTGADRRIVLKFLRSVVGIGGDDRVRTVSVATNELVAGDDGCVEAQPTGTVAEHRAGLVIHAVGYHGTPIPGIPFDTERGVFRNADSRIVGYDGAPLPGHYVVGWIKRGPSGVIPTNRDCARDTVSVLLADVVAGKLARSEFDGAQVEKLIVDRVPNLVEYDGWMAIDAHETALAEEDDRPRVKLTSVDAMIDAAQAAAE
>CP019066.1|AUN41599.1|3599646_3601203_+|carboxylesterase
MSVAEERPEVKIDTGVVRGRWRPTVGGPAGVGATRSAEFLGIPFAEAPVGGLRFGAPVPRSPWDGVLDAGAYGATAQRGDPGVVLIPEPSIPGDGTLNVNVFTPSPEHSDGAGLPVLVWIHGGGYFAGSPASPWYDGRNFNRDGVVTVTVSYRLGFDGFGWIEDAPSNRGVRDWLLALDWVQRNIAAFGGDPARVTLAGQSAGGGAVLTLLGMEAAQHLFSRAIVMSGVLAAASSDRAEAFGRDVARRAGVAPTLAGMATVPEERLLRLQRKATSIDLPGLRAAFTHGLPLGPTVDGDLLPQGTIAALRSGVGADKPVLIGATDDEFTRLFVDAPLKYLMPLLPTAAILALLAVPRALRADYLTANPDVLARGSGALAGRLLSDAMFRVTVPRIADFRASTPGAAPIWTYRFSWTSGPSGIAGHCLDVPFFFDCLDGPAIEPLAGPRPPQALADQVHGAAVTFVTDGAPGWPASTATAPISRVFDVPVRDVPDAYASARPLLTHSRHAVPRTSAGEAR
>CP019066.1|AUN41598.1|3599131_3599611_-|N-acetyltransferase
MDTSITRADFADPALAAFLAAHHADMAPTAPPESQHALGLEELRAPHVRLWTLHDDGALVGTVALAEVEPGHEELKSMRTAPKARGRGIGRRLLTHALDDALARGVQRISLETGSQDFFAPARALYAAHGFVPCPPFGHYVDDPNSTYLTRTVGVPSES
>CP019066.1|AUN41597.1|3598532_3599069_-|peptide-methionine-(S)-S-oxide-reductase
MTDNGTITTVPGRETAVLAGGCFWGMQDLIRKQPGIEETRVGYTGGANDHATYRNHPGHAEAVEIVFDPAKTSYRDVLEFFFQIHDPSTKDRQGNDVGSSYRSAIFPLSEEQERVARDTIADVDASGLWPGKAVTTIEAAAPFWQAEPEHQDYLEKYPDGYTCHFPRPGWKLPKRASA
>CP019066.1|AUN41596.1|3597538_3598531_+|ribosome-small-subunit-dependent-GTPase-A
MGKREYDETDVRVRPGKSSRPRTKNRPDHSDAATAMVVSVDRGRWGCALDGDPERIIVAMRARELGRSPIVVGDSVGVVGDLTGRKDTLARIVRVDERKTVLRRTADDTDPYERIVVANAQQLLIVTALADPPPRTGFVERTLIAAYAGGLTPVLCLTKGDLADAAEFTAAFADLDLTVISAGRGDPLDEAHELLTGRLTALIGHSGVGKSTLVNRLVPDANRATGVVSGVGKGRHTSTQSVALWLPDGGWVVDTPGIRSFGLAHISTDDVIAAFPDLDDAVQDCPRGCTHLGPPADPECALDRLEGTAHRRAMAVRGLLTDLTATPDWA
>CP019066.1|AUN41595.1|3596245_3597535_+|3-phosphoshikimate-1-carboxyvinyltransferase
MCKDVRVEQLELWPAPFAAGPVTGTVALPGSKSITNRAYVLAAQAPSRSTLTNTLRSRDTDLMARALGTLGARVDFLTDTTVAVTGGDLHGGDVDCGLAGTVMRFLPPLAAGARGTVAFDGDPQARARPLGTVLDALRGLGARIDGDGLPFTVHGDGPIRGGTVTIDASASSQFVSGLLLSGPGFAEGVTVHHDGKPVPSMPHIEMTVDMLRAAGAEVDTSEANTWRVAPGGLRAHDWTVEPDLSNATVFLAAAAVTGGAVTVPHWNPQSTQPGVQFADILSAMGAEVSHADGALTARGTGALQGVDWDLRDIGELTPTVAALAALADTPSHLRGIAHLRGHETDRLAALTAEITALGGRCAETEDGLRIEPATLHGGVWHSYADHRMSTAGAILGLVTAGVQVEDIAATSKTMPDFPALWHALLGGGS
>CP019066.1|AUN41606.1|3608708_3609104_-|hypothetical-protein
MGAGVAASAPAASAAPVPLIGTQWRFESSGVARTAPVKYTGSPAYFSIDGTQGGGNDGCNVFGMNVEVKGDRATFSGLFSTLRMCYVPGAGVQFGKAFAGPRTVTVTGNRLRVSDGPRGYWNFVANGPAKK
>CP019066.1|AUN41607.1|3609174_3609717_-|hypothetical-protein
MTVRVYVPSTLAGLQVLQRDGELFPLGGTVFGVTPALREAYTSGDDEELAEAAMRQAARASLRLLAVDEPDPADGAGAEGAGAAPDPVRRVVITADVPAAKERPDLDDAVLKVTEPIRLKNVLAVHVDVSEAEGAVTRAAQVVDAADLGDEDAELAVGDAEDHDLAWYATQELPFLLELL
>CP019066.1|AUN43140.1|3609717_3611121_-|diacylglycerol-O-acyltransferase
MKGRLGQSDAEFYALENSTTPTHVGSLVILGRPDEGLEYERLLATIEERLAEVPRYRQKVRTVPLGIARPVWVEDRDFDITYHVRVSALPQPGSDDQLHDLVARLNSRPLDRERPLWEVYLIEGLADDRLAVFSKTHLALVDGRANVDLMQLLLTDSPHTPEPPEDLWMGQHEPSDGELVMGAVIDMLSRPKRTAAMIQGVVGEVAESITGLQEDAANVIERASSLVRARTAVTPVRSLNVPISRSRRFAVARMDLDEFRRLRAAYGCTVNDLLLSVIAGGLRTWLISRGEPISAGTEVRVLEPIAVDDVGLGVGEQVRAYIVRLPVAESNAVVRMRQIAHGAAAQVDRNRQVAARALAASGGFTPPTLHALGARTAMSVSPRSFNTLVTNAPGPQAPVYLSGIEVQQVYPVPPLIANQVVSIGITSYNGTVYIGLNADRDGMWDVISMTEFLYEALDEIAASAKGE
>CP019066.1|AUN41608.1|3611229_3611793_+|hypothetical-protein
MGAIILAADGARARAPRTPEPGFVVLRAPDAEPPARPLSLVRAARAAPPLPAPSDPAPPEPVALPGPVAAVHPDAHRFVLSTLRPVFEVLDRRRPAKHLTAIATATVVDVLRTLAETGPAGTVSGWGNVHVGTPRALAQRARRRPRGPEVGAEIFLTYTRGERVLAAAGRVEAAAGRWRWVAFTTAA
>CP019066.1|AUN41609.1|3611859_3612540_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MSLSSLRAAFRYRVARHLLIGPALWAWGRPEYTGLENIPRSGPVILAANHLAISDSFYVVQSARRPVSFLAKADYFTEPGLKGKFKKVFFSGMGQIPVDRRGGSVSAPALEAATKIVEDGGAWGIHPEGTRSPDGRLYKGKTGAVRVALATGTPIIPIALGRTDNRTRKNFWKSRVTVDVLPPLDLSDASLDDQESIRRATDRLMDVIGEHTGQTRVPEYAKKGGK
>CP019066.1|AUN41610.1|3612544_3613216_+|hypothetical-protein
MSALRQAFWFALLGAAVALLGATASGGAWSLEDGTYLAADGWLVSGGHTRPGVIGAAAGAVTGLVLWAVGVRPRGREDDRIGTVALAGLLGAAVGLSPVLAFVGFSFAGAVSAPSAPVILAIYAAGGLLAYGAALAAVARALRALGDAHVRATVCTLAWALPLGAALATAAGVAAAATTDFSTTTATWIRAVIAALAVVAATLAAGRALAVRTARGAAPADPA
>CP019066.1|AUN41611.1|3613244_3615998_-|preprotein-translocase-subunit-SecA
MVLSKVLRFGEGRMVKRLDGLASYVESLNDEYEALSDEKLQAKTEIFKKRLEKGETLDEILPEAFATAREAAWRVLGQKPYHVQIMGAGALHQGDIAEMKTGEGKTLTSVMAAYANALTGKGVHLVTTNDYLAKRDADWMGRVHRFLGLEVDCILAGQDPDRRRTAYSADITYGTNNEFGFDYLRDNMAHSEEELVQRGHNYAIVDEVDSILIDEARTPLIISGPADASSKWYTEFARIVPLMEKDVHYEVDIRKKTIGVNEAGVELVEDQLGIENLYDATNSLLVSYLNNAIKAKELYERDKDYIVRSGEVLIVDEFTGRVLAGRRFNEGMHQALEAKENVEIQAENQTLATITLQNYFRLYDKLSGMTGTAETEAAELHQIYKLGVIPIPTNKPMIRKDQTDLIYKTEEAKFAAIVEDIAERHEAGQPVLIGTTSVERSEYLSRQLERKKIPHTVLNAKFHEQEAAIIAKAGTPGAVTVATNMAGRGTDVVLGGNPDILADLALRERGLDPVTTPEEYEAAWDETIEQVKKESKDAGDDVRDAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAQIEAWMNRVNLPDDVPIDNKFVSRAIRSAQTQVEQQNFEIRKNVLKYDDVQNEQRKVIYDERRKILRGEDLFDQVNHMTDDVVSAYVDAATSTGYVEDWDLDELWTALKTLYPIELDWKQVVGEDENGDRDEITSGELKDVLLKDIHAAYDKHQEGIEKAAGEGTMRQVERSVLLSVLDQKWREHLYEMDYLKEGIGLRQIAQRDPVVEYQREGYDMFNGMLEGLKEESVATLFKVQVQEPEEGAPAADGAEAPAQAQVSSPVAEPDPEKITLSGPSEQGDLTEISQNADEPQGSRSERRAAKREADKAAQKAAAARGKHRR
>CP019066.1|AUN41612.1|3616077_3616803_-|ribosomal-subunit-interface-protein
MTLLSPRDTNRAHATPNVEVDPFREPSHVTDERDKDYLTPNAPVAIDGRNVEVPEHFRVYLGDKLARLEKFRTTITLFEVSLFHEPNPRQSKQCQRLELTVRGKGGVARAEAAAENFYAAFETALSRLQSRLRKASDRKKVHYGNRTPVSVAEATAPSALPDAPAASEADDDPYAALVEDHLPGQIVRIKDHPGTPMTVDDALSQMELVGHDFFLFFDKEAEKPSVVYRRKAFDYGLLRLT
>CP019066.1|AUN41613.1|3617080_3617335_+|hypothetical-protein
MSHRTQITLEDAQYVRLLAESRASGLGLAELIRRAVDLTYGGADADAFDAALDQSFGTWGSDGPDGEEFVEAIRPARIDRFARW
>CP019066.1|AUN43141.1|3617346_3617721_+|hypothetical-protein
MLLDTSIFIDTLRGRREARDRLSDARREGRRLVASVLTRTEVLGGMRASEKSSTAALLAVFEWIDVSEEIADAAGSLARRYRASHSGIDIADYVIAATAAVAGADLWTRNVKHFPMFDGLEPPY

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Crispr_ID: CP019066_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019066_6

4276731-4276820

Orphan

Consensus_repeat	Method
GAACGCCGCGCGGGGGTGGACCGCTCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019066_6

>merge|CP019066|6|4276731-4276820|CRISPRCasFinder
GAACGCCGCGCGGGGGTGGACCGCTCCCCCACCGAACTGCCCCGGCGTCCCGCGGGGGAGTGAACGCCGCGCGGGGGTAGACCGCTCCCC

>CP019066|6|5|4276731-4276820|CRISPRCasFinder
GAACGCCGCGCGGGGGTGGACCGCTCCCC	CACCGAACTGCCCCGGCGTCCCGCGGGGGAGT
GAACGCCGCGCGGGGGTAGACCGCTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP019066.1\|AUN42185.1\|4279867_4280518_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP019066.1\|AUN43208.1\|4276016_4276682_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226309
CP019066.1\|AUN42191.1\|4287383_4288133_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275120
CP019066.1\|AUN42190.1\|4285758_4287387_-\|2,3-dihydroxybenzoate-AMP-ligase	unknown	unknown	gnl\|CDD\|223952
CP019066.1\|AUN42183.1\|4277901_4278768_-\|hypothetical-protein	unknown	unknown	unknown
CP019066.1\|AUN42180.1\|4274882_4275125_+\|hypothetical-protein	unknown	unknown	unknown
CP019066.1\|AUN42175.1\|4270140_4272213_+\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224422
CP019066.1\|AUN42184.1\|4278841_4279780_-\|polyphosphate-kinase-2	unknown	unknown	gnl\|CDD\|213852
CP019066.1\|AUN42178.1\|4273107_4273545_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225168
CP019066.1\|AUN42187.1\|4282341_4284051_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224055
CP019066.1\|AUN42189.1\|4285138_4285762_-\|2,3-dihydro-2,3-dihydroxybenzoate-synthetase	unknown	unknown	gnl\|CDD\|238495
CP019066.1\|AUN42173.1\|4267684_4268557_-\|ectoine-hydroxylase	unknown	unknown	gnl\|CDD\|131461
CP019066.1\|AUN42177.1\|4272817_4273120_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376658
CP019066.1\|AUN42179.1\|4273603_4274899_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129794
CP019066.1\|AUN42186.1\|4280566_4282345_-\|ABC-transporter	unknown	unknown	gnl\|CDD\|224055
CP019066.1\|AUN42182.1\|4277065_4277905_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227099
CP019066.1\|AUN42181.1\|4275121_4275961_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375319
CP019066.1\|AUN42174.1\|4268769_4270152_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|236106
CP019066.1\|AUN42176.1\|4272212_4272806_+\|hypothetical-protein	unknown	unknown	unknown
CP019066.1\|AUN42188.1\|4284053_4285142_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224091

Protein	Function_ID	Function_description	E-value
CP019066.1\|AUN42185.1\|4279867_4280518_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	5.02619e-07
CP019066.1\|AUN43208.1\|4276016_4276682_+\|hypothetical-protein	gnl\|CDD\|226309	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown].	1.82674e-30
CP019066.1\|AUN42191.1\|4287383_4288133_-\|hypothetical-protein	gnl\|CDD\|275120	TIGR04316, 23-dihydro-23-dihydroxybenzoate_dehydrogenase, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase. Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase.	1.25893e-73
CP019066.1\|AUN42190.1\|4285758_4287387_-\|2,3-dihydroxybenzoate-AMP-ligase	gnl\|CDD\|223952	COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	0
CP019066.1\|AUN42175.1\|4270140_4272213_+\|S9-family-peptidase	gnl\|CDD\|224422	COG1505, COG1505, Serine proteases of the peptidase family S9A [Amino acid transport and metabolism].	0
CP019066.1\|AUN42184.1\|4278841_4279780_-\|polyphosphate-kinase-2	gnl\|CDD\|213852	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1). [Central intermediary metabolism, Phosphorus compounds].	3.40307e-154
CP019066.1\|AUN42178.1\|4273107_4273545_-\|hypothetical-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	2.76983e-16
CP019066.1\|AUN42187.1\|4282341_4284051_-\|ABC-transporter-permease	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.76415e-66
CP019066.1\|AUN42189.1\|4285138_4285762_-\|2,3-dihydro-2,3-dihydroxybenzoate-synthetase	gnl\|CDD\|238495	cd01013, isochorismatase, Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological systems. Isochorismatase is part of the phenazine biosynthesis pathway. Phenazines are antimicrobial compounds that provide the competitive advantage for certain bacteria.	4.026e-107
CP019066.1\|AUN42173.1\|4267684_4268557_-\|ectoine-hydroxylase	gnl\|CDD\|131461	TIGR02408, putative_L-proline_4-hydroxylase, ectoine hydroxylase. Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.	2.4937e-107
CP019066.1\|AUN42177.1\|4272817_4273120_+\|hypothetical-protein	gnl\|CDD\|376658	pfam01910, Thiamine_BP, Thiamine-binding protein. The crystal structure of two of these members shows that this domain has a ferredoxin like fold and is likely to exists as at least homodimers. Sulphate ions are are located at the dimer interfaces, which are thought to confer additional stability. Although the function of this domain remains to be identified, its structure suggests a role in protein-protein interactions possibly regulated by the binding of small-molecule ligands. Solution of the structure of the hyperthermophilic anaerobic Thermotoga maritima sequence, UniProtKB:Q9WYV6, shows that this has a beta-alpha-beta-beta-alpha-beta ferredoxin-like fold and assembles as a homotetramer. It was possible to identify a pocket in each monmer that bound an unidentified ligand. It was also found that it bound charged thiamine though not hydroxymethyl pyrimidine. It is proposed that it is transporting charged thiamine around the cytoplasm. Under oxidative conditions this bacterium is under stress, and the transcriiptional unit within which this protein is expressed is up-regulated in these conditions, suggesting that the chelation of cytoplasmic thaimine is part of the response mechanism to such oxidatvie stress, which is mediated by this family.	1.50466e-31
CP019066.1\|AUN42179.1\|4273603_4274899_-\|hypothetical-protein	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	5.79638e-36
CP019066.1\|AUN42186.1\|4280566_4282345_-\|ABC-transporter	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.20354e-120
CP019066.1\|AUN42182.1\|4277065_4277905_-\|hypothetical-protein	gnl\|CDD\|227099	COG4757, COG4757, Predicted alpha/beta hydrolase [General function prediction only].	1.28084e-15
CP019066.1\|AUN42181.1\|4275121_4275961_+\|hypothetical-protein	gnl\|CDD\|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	6.33819e-23
CP019066.1\|AUN42174.1\|4268769_4270152_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|236106	PRK07818, PRK07818, dihydrolipoamide dehydrogenase; Reviewed.	0
CP019066.1\|AUN42188.1\|4284053_4285142_-\|hypothetical-protein	gnl\|CDD\|224091	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	1.69939e-97

>CP019066.1|AUN43208.1|4276016_4276682_+|hypothetical-protein
MGLAALPAAAVATSVTVPHAAAADADKALLDAAVAAAPTAREVITVAAPSFSSTDVQVSAWALLAQGWTKVYGPVPGKVGQQGIGEGKDGVPRTPFGVFTLDLAFGRQDNPGTTLPYTKVTNQHWWDGNVNSPTYDRMVVQAASPGPESENLYDIGPVYDYAVHFDNNPSHTPGKGGAMFLHVTDGKPTLGCVAISRDGMITLLKWLAPAHNPVLVTGLAG
>CP019066.1|AUN42181.1|4275121_4275961_+|hypothetical-protein
MSGERSSELGAFLRARRDALTPEGVGLPRTGPRRVPGLRREEVAALAGVGLTWYTWLEQGRPISVSTQVLDALARLFRLTGEEHDYLYRVAGVPAARPPDAPPAAAIDPVTRRVLDRFGTTPAAVFSERYDLIAASAGFRLLFRGIDGNTGLDRNALYKMGRAADTRHPVADPDYLAAMVTQVRHAYGRHVGEPGWERFIAEITGSSPVIAAAWESQEVGHAPSEHRFRCPPVGWIRFSSTRYLLDRFDGAFLTVYLPFDDDAQEQFDEVVRRGGVSFT
>CP019066.1|AUN42180.1|4274882_4275125_+|hypothetical-protein
MVASIIGIVEKPSRARSFAVPPRDDGRAVTDSWATVRFTVTTLRTEPEPHQEADHPGTTATTHSATSAMTIAEIRGMLSG
>CP019066.1|AUN42179.1|4273603_4274899_-|hypothetical-protein
MIDATIVNVAAPSIARDLPATPTQLQFVVGGYLLAYGSLIITGSRWGARHGHVRALRAATVGFVLASIACGLAPNAAVLIAARVVQGMTAAAIIPQVMSLIQRTYAGPALARALSMFSLTTAGGFILGQVGGGLLVSLDVAGLGWRLVFLVNLPIGAVLLLALRRYFAADEGDPGTRMDVGGVVTGAVALLLLIAPLTLGRSCDWAPWVIGLLVLAVPALATFVWFERGVARRGGNPLVSGGLVRSRGFSAAVAVVLLVFANYAGFLFATTLFLQADHGYGPLASGLWFLWFTPGFVAVTVGWKRLPPRLLGPLVALGAVVIVVGDLLLWRAAQSPSVGAGFALALLVLGAGTGAMFGPILTLALRSVAPERAPEASGVVTTMFQVGSAIGVAAVGSVYFAGGLTAAALWSAGLAGVAVVLVVMTQVRSRP
>CP019066.1|AUN42178.1|4273107_4273545_-|hypothetical-protein
MDTTRDLWLLVARASVGVMFFLSGWGKVANPQKFAADFAAWGIPEPDLASTVTAWAELVLGALLVLGLLTRLAAAGLAVTMLGAIYYSVWPAAVEASTTIPGFLSQFFYSPEWLLLLVLLALAGAGPGRFALDEPFGIEARLQRR
>CP019066.1|AUN42177.1|4272817_4273120_+|hypothetical-protein
MLAAFSISPMGGDQSADGGVAAAVAEAVAIVRASGLPNETTAMFTTIEGEWDEVMGVIKACVDRLAESAPRVSLVVKCDIRPGHTGQLTAKVERVERHLR
>CP019066.1|AUN42176.1|4272212_4272806_+|hypothetical-protein
MPVRSARSLAVFMGAMTVLWSVLGLHAVPVVGLVLAVAGAGVMVAAGVMARGRADATTADPGPPGRTGRPRAGGASRSVFRSAVAGEAVAAVIAVFALNRTGHPQYIAPTIALIVALHFFVFLLDGPQPMHVAAGTVGTVAAATAIGLMAAGVVTPGTGHAIAGGALALCTFGYGLGFLRILADSPRSTTQPGTARN
>CP019066.1|AUN42175.1|4270140_4272213_+|S9-family-peptidase
MISHGFQPSPSVESMDQYAWLEEVESATALDWARERNAASTARLTGPRFDELEAGVLAILDTDQRIPYPVRRGEYLWNFWRDADHPYGLWRRTTLESFRTDSPEWDVVIDVDALREAEGENWVWGGAAVLRAESPDGARYDRALVSLSRGGADATVVREFSISRREFVDDGFSLPEAKSRISWIDKDTVYVGTDFGPGSLTDSGYPRLVKRWRRDTPLGHADLVYEGHHSDVSIGAGYDDTPGYERHFVSRAIDFYNSEIYLLAPDTLALERIDVPTDSDADVHESRLLVRPKSAWELPTGTVPPGALVAFDFDAYRAGSRDYSTVFTPDAHTALAGYSWTKSYLLLSTMRDVRSELHTLEPGTWETRETRGFPELAEIGVYYTDPREGDEIFATASGFTLPPTLLHGTAGGSVEPLKSAPAFYDATGVTAEQFFATSDDGTQIPYFVVRKPADGPQPTLLYGYGGFEVSLTPDYTAVSGTSWIERGGVYVLANIRGGGEYGPDWHTAALKENRLRAYEDFAAVARDLVARGITTREQLGAQGGSNGGLLMGVMYTRYPELFGAIVCQVPLLDMRRYHQLLAGASWMAEYGDPDDPAQWAYISEYSPYQNLPAADADLPALLVTTSTRDDRVHPGHARKFVAALRERGIEVDYYENIEGGHGGAADNKQAAFKSALAYEFLWRELGSTGH
>CP019066.1|AUN42174.1|4268769_4270152_-|dihydrolipoyl-dehydrogenase
MADHFDTVVLGAGPGGYVAAIRAAQLGQKVAVIEEKYWGGVCLNVGCIPSKALLKNAELAHTFTHKAQLFGISGDVSFDFGAAFDRSRKVSEGIVKGVHFLMKKNKITEINGYGTFVDAKTIQVGDQTVTGDNIIIDTGSTVRLLPGVTLSDNVVTYEEQILTRDLPQSIAIVGAGAIGMEFAYVLKNYGVDVTIIEFLDRALPNEDADVSKEIAKQYKKLGVNILTSTKVESVDDQGSQVVVKYTGPKGAGEITVSKVLMSIGFAPRVEGFGLEKTGVALTERGAIAIDDYMRTNVPGVYAIGDVTAKLQLAHVAEAQGVVAAETIAGAETQTLGDYRMMPRATFCQPQVASFGLTEQQAKDEGYDVKTATFPFSANGKAQGLGDAVGFVKLVSDAKYGELLGGHLIGPDVSELLPELTLAQKWDLTVNELARNVHTHPTLSEGLQESIHGLAGHMINL
>CP019066.1|AUN42173.1|4267684_4268557_-|ectoine-hydroxylase
MNNAATLTDHYPTRVDHSEIHDRHDPVVWPGRSGPWPDGAVDDFAARGFRSVEGVLGAGDIRDVRAEIDAVTTRLGTDERVIRETSDGSVRSVFAVHELSEKIASIIAREEIAGVARQLLGDDVYVHQSRVNLKPGFAGGPFYWHSDFETWHAEDGMPTPRAVSVSLALTPNTPFNGSLMIMPGSHRRFVSCVGRTPGEYHRESLKSYRPPFGTPEERDIAAMADEYGIEQVTGGAGSALYFDCNCLHASAGNISPYPRSNLFVVFNAVSNGLQEPFAADARRPEYLATR
>CP019066.1|AUN42182.1|4277065_4277905_-|hypothetical-protein
MTSTARPTVATLTYKDGTTNPVRIFRGPDPTAPVLMIWPGVNVPAGYFDDFGRGLIDAGFNAVVAELRGQGDSRPRGAAGTHGFQDVVVEDYPAVSALARQKFPGAPRILLGHSLGGLMGVMYAARARRNLAGVILVACGTGYYKLDGLSGTARRIGTSVAARAAARRGHWSGPDGLGEVPAGIVADFDHLVQTGDFNVAGADVDYEARLAGTRTPVLTVAIAGDELVSDRQSRFVGEKFPSSVHRRIEEPLGHNQWILSPGAVIPALSGWIAQSVPRG
>CP019066.1|AUN42183.1|4277901_4278768_-|hypothetical-protein
MRSLTAFLLVLVAIAATFVAVPAAWAKNTVLDRAEFMTLMEPLGRDPAVQDAMAQEISQQVQRLLTEQGDARPPLDAITPYVSTYVHGPQFPGAFTEAVGQVHTWLLVRPTAEQRLRGATTAEIDLAPMIRDVAAANNVKVTVPERVTIDLSGTGANRDLFRAGRYASIADTIRSAAWIAPLTALAAALLALLAAHRRGFMMFYLGLGVAVAAGVTWMLCVAAPSYVSSRSGTGGLSPVVDAALDQVTKSLTPWIMTEAAIGGALALLGLIFGGLGAVAARRAERRAW
>CP019066.1|AUN42184.1|4278841_4279780_-|polyphosphate-kinase-2
MDLDLPVGIDLSAVSGREALQKIVDLRATEGFSVNDDDDDDPVLLTPERHVVDTWREGYPYSERLARSEYERDKRLLQIELLKLQRWVKDTGQRLVIVFEGRDAAGKGGTIKRFMEHLNPRGARVVALVKPTEREAGEWYFQRYIDHFPTKGEIVLFDRSWYNRGGVERVMGFCTDEQHERWTHQVPLFEKMLVEDGIDVTKFWFSVTQLEQRTRFAIRQIDPVRQWKLSPMDLASLDKWDGYTAAKEEVFAATDTDYAPWTVVKSNDKKRARLNAMRYILDKFDYDNKDMDVLAAGPDPLIVGRGRDLISD
>CP019066.1|AUN42185.1|4279867_4280518_+|TetR-family-transcriptional-regulator
MPTTANRGRRRAEHLGPERRRPQVLDAALEIAARDGLAAVTIGTVADRLQVTRPVIYSCFPDRVALITELLDRETETMMTYVLTSLHNAHGEDPETAFIIGMRGLLAAVNERADTWQLLFSGVTDPEVVHRVRGARATLAKQAEEWIRPALIRWWDMQDLDEKLPMLMELFVSACEAAVRSMLAGRPDDAGPQWRGDSERIGKFYGSAVYRAFLGA
>CP019066.1|AUN42186.1|4280566_4282345_-|ABC-transporter
MSAPTTTAVAGALPVADGAETFRFARGLLAGKRGALALVFVVLLVGAALGLAVPWGFGAMVDVALDGRGYPDVLRIGGLMAVAAIASAAFTGIGIVLSARLFETALARLRESMVGAALRLSQARVEEAGSGDLVSRATDDVGAVSQAISRGVPALARSGFSVAVTVAGFAALDWRFLLVVLVVLPVYVLGARMYVRTAPPVYRSERAAMAERAHHMLGSIRGLPTVHAYDLMDRASLRVGDGSWRVVRWSMRARIVQNRLFGRVNLAEFVGMATIVVLGVALVDGDVVTVGAVTTAMLLFLRLFGPIGALLMVMDDIQSAGASLARIVGVIRLGEAEAAGPAPSGEVDVSDGPPRVEVDGVAFGYGGGRRVLDGVTVRLEPGETVAVVGTSGAGKTTLAALIAGVHVPAAGTIRIGGTDLETLPDSAAPVLLTQDVHVFAGTLAEDLRMAAPSASDADLHAALERVGAAEWVALLDDGLQTVVGAGGHALTPQREQQLALARLVLLDPPVAILDEATADADSADADALEEAAQAALAGRTALVVAHRLSQAARADRVLVMERGAVVEQGTHDELRHAGGRYAQLWAAWSRHR
>CP019066.1|AUN42187.1|4282341_4284051_-|ABC-transporter-permease
MADWTGSRLPVFFEAPEQQPDHRPIAVDADTTPRQLVLRTMLGDRSRTLPAGLLIVGHQVGEALVPVVMGLAIDRAVRTGDWSATLRWVLVLAVLFAFLSFSFRFGSRIGFLGMNTVQHRLRTQVTDRILDPRGLGGGHPPGVLLSIATSDVQRLAMSVALGLYPAGELAAIVFCGVVLLSISWQLGLLVLLGAPAMLWCLDKAGGALRARSEAEQRAAGEAAGAAADLVAGFRVVKGMHAEAEADRRYRSASARALSAVIRARRSEGAYVGAMEAVAAVFVVLVGVLAGIQTVRGDLTVGQLITVVGLTQVVMAPLQAMGTNVGKFWVAGNASAKRVLMVLQAPFARDEGTLHAHDGDEVPVRLTGVPAGEGVVDLEFPPAGVTAVVCDAETTAAATALLARTGAPRPGASVTVGGTDLYTLTQPAALRTVRVAPHATTLFEGTVEENVAAGGAPDRVAAALLAAACDDVLEVLPDGLRTSVGEAGRLLSGGQRQRVALARALATDTRTLVLVDPTSAVDSVTEAAIADRLGAARAGLATVVFTASPTLIAAADTVLTVSPTGAEVRA
>CP019066.1|AUN42188.1|4284053_4285142_-|hypothetical-protein
MTASTSGESDHPHFLLTAAGQRLAARGTAATFVDPHAAAAALRAGTAPAVVGALPFDLADPAALTVPEHFGDVPASAGGAAAELPTLTQTAQHPAPAEHVDRVRRAIALIDDSDLQKVVLARAVDFEADAPLDPLAVAAALEQRDLEGNAFAVDLAAAGEDYRGRWLVGSSPEILVGRMGNTVFCHPFAGTATSPEGLLDSEKDREEHAYVVDEIASALAPLCAELDVPAAPSVTRAGPVWHLGTKIEGRLADPATSALDLALALHPTPAVCGFPRRTAARAIADIEGERGFYAGAVGWTAANGDGHWRVSIRCAELDGARLRAYAGGGIVGASDPQAELAETRNKLRTVLGPFRLTETARS
>CP019066.1|AUN42189.1|4285138_4285762_-|2,3-dihydro-2,3-dihydroxybenzoate-synthetase
MSLPKTVVYDLPEIECADTVDWTVEPARAVLLIHDMQEHFVGPFERDAEPLRTVVPNIVALRAAARAAGVPVVYTAQPGDQDPEERALLTDFWGPGLKTANQDIIAELTPADDDVLLTKWRYSAFAKSDLAERMRAWGRDQLVIAGIYAHIGIMTTALDAFMRDVQPYVVRDAVADFSAQDHANALTYVAGRCGRVETTDKVLEALR
>CP019066.1|AUN42190.1|4285758_4287387_-|2,3-dihydroxybenzoate-AMP-ligase
MTTTQTRYFPEEFAARYRAAGYWTGETFAGFLPEAAERFGDAEALVAQDLGGDPVRLSYRELDTAAAVTAVGLRARGIAEGDRVVLQLPNTAEFVTVLFGLFRIGAVPVFALPAHRRSELVHFVRTSGAKALITAATINRFDHRALAAEVAAETGVDVLVADDAPFGDGTDGAPATVDPEGLAFLQLSGGTTGVPKLIPRTHADYLYSVRESAKICGLGPGTRFLVVLPVAHNFPMSSPGILGVVWAGGTVVLGTDPAPSKAFPLIEAEKVTMTSLVPPLAMLWLQAAPAATADLASLDVLQVGGAKFPPEAARRVTPELGCRLQQVFGMAEGLVNYTRGDDPEDIVLGTQGRAISPDDEVRVLDDDGAPVAEGEPGHLHTRGPYTIRGYLGGVDAESFDAEGFYRTGDIVRRLPSGHLVVEGRAKDQINRGGEKIAAEEVENHLLAHPLVIDAAVVAVADEFLGERTCAVVLTGDERPTVPELKKFVRARGVAEYKVPDRVEFVAEFPTTGVGKISRRELRRALADRLRHQDEARKNEEKL
>CP019066.1|AUN42191.1|4287383_4288133_-|hypothetical-protein
MHAFITGAASGIGAATALRLARRGPVALADRDADGLVATARAVTEAGGTATSHVLDVTDAAAVAAALDAAEKAGGPVNALAHCAGILVAGPLLDTAAEDWAAALAVNLTGTVNVLTAAARRMAERGAGAAVVVGSNAGNGPRVGLGAYGASKAAAHSATLTLALELAGSGVRINVVAPGSTATPMQTAFGGAAAAEAAIAGDLARHRLGIPLGRIADADDIAGAIAYLLSPDARHVTAQVLTVDGGATV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP019066_4	4.4\|3254740\|21\|CP019066\|CRT	3254740-3254760	21	CP019066.1	663428-663448	2	0.905
CP019066_4	4.4\|3254740\|21\|CP019066\|CRT	3254740-3254760	21	CP019066.1	2447263-2447283	2	0.905

1. spacer 4.4|3254740|21|CP019066|CRT matches to position: 663428-663448, mismatch: 2, identity: 0.905

cgcgggcgccttggtcgccgc	CRISPR spacer
cgcgggcgccctgctcgccgc	Protospacer
**********.** *******

2. spacer 4.4|3254740|21|CP019066|CRT matches to position: 2447263-2447283, mismatch: 2, identity: 0.905

cgcgggcgccttggtcgccgc	CRISPR spacer
cgcgggcgccctgctcgccgc	Protospacer
**********.** *******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP019066_1	1.1\|224575\|37\|CP019066\|CRISPRCasFinder	224575-224611	37	NZ_LR134454	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence	6193-6229	0	1.0
CP019066_2	2.1\|937154\|52\|CP019066\|CRISPRCasFinder	937154-937205	52	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	214533-214584	0	1.0
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2509-2532	0	1.0
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2566-2589	0	1.0
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2650-2673	0	1.0
CP019066_4	4.4\|3254740\|21\|CP019066\|CRT	3254740-3254760	21	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2482-2502	0	1.0
CP019066_4	4.5\|3254794\|33\|CP019066\|CRT	3254794-3254826	33	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2416-2448	0	1.0
CP019066_5	5.1\|3607465\|32\|CP019066\|CRISPRCasFinder	3607465-3607496	32	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	102913-102944	0	1.0
CP019066_3	3.1\|1650337\|35\|CP019066\|CRISPRCasFinder	1650337-1650371	35	NZ_LR134452	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence	140052-140086	1	0.971
CP019066_3	3.1\|1650337\|35\|CP019066\|CRISPRCasFinder	1650337-1650371	35	NZ_LR134452	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence	140116-140150	1	0.971
CP019066_4	4.2\|3254626\|24\|CP019066\|CRT	3254626-3254649	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2455-2478	1	0.958
CP019066_4	4.2\|3254626\|24\|CP019066\|CRT	3254626-3254649	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2509-2532	1	0.958
CP019066_4	4.2\|3254626\|24\|CP019066\|CRT	3254626-3254649	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2566-2589	1	0.958
CP019066_4	4.2\|3254626\|24\|CP019066\|CRT	3254626-3254649	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2593-2616	1	0.958
CP019066_4	4.2\|3254626\|24\|CP019066\|CRT	3254626-3254649	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2650-2673	1	0.958
CP019066_4	4.3\|3254683\|24\|CP019066\|CRT	3254683-3254706	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2536-2559	1	0.958
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2455-2478	2	0.917
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2482-2505	2	0.917
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2593-2616	2	0.917
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	MH669000	Gordonia phage Ali17, complete genome	18701-18724	2	0.917
CP019066_4	4.2\|3254626\|24\|CP019066\|CRT	3254626-3254649	24	NZ_AP018516	Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence	122793-122816	2	0.917
CP019066_4	4.3\|3254683\|24\|CP019066\|CRT	3254683-3254706	24	NC_048047	Caulobacter phage CcrBL9, complete genome	296125-296148	2	0.917
CP019066_4	4.4\|3254740\|21\|CP019066\|CRT	3254740-3254760	21	NZ_CP028919	Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence	229681-229701	2	0.905
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	388445-388468	3	0.875
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	504504-504527	3	0.875
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1322237-1322260	3	0.875
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_CP014308	Burkholderia sp. PAMC 26561 plasmid unnamed1, complete sequence	505179-505202	3	0.875
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_CP014308	Burkholderia sp. PAMC 26561 plasmid unnamed1, complete sequence	364860-364883	3	0.875
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_CP014309	Burkholderia sp. PAMC 26561 plasmid unnamed2, complete sequence	470252-470275	3	0.875
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_CP014309	Burkholderia sp. PAMC 26561 plasmid unnamed2, complete sequence	329923-329946	3	0.875
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_CP032687	Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence	557508-557531	3	0.875
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_CP032692	Rhizobium sp. CCGE532 plasmid pRCCGE532b, complete sequence	486072-486095	3	0.875
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	615016-615039	3	0.875
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_CP014510	Burkholderia sp. PAMC 28687 plasmid 3, complete sequence	21930-21953	3	0.875
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NC_020061	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence	528012-528035	3	0.875
CP019066_4	4.1\|3254569\|24\|CP019066\|CRT	3254569-3254592	24	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	810143-810166	3	0.875
CP019066_4	4.2\|3254626\|24\|CP019066\|CRT	3254626-3254649	24	JQ807249	Environmental Halophage eHP-30, partial genome	22735-22758	3	0.875
CP019066_4	4.3\|3254683\|24\|CP019066\|CRT	3254683-3254706	24	NZ_CP020386	Rhodovulum sp. MB263 plasmid pRSMBB, complete sequence	52146-52169	3	0.875
CP019066_4	4.3\|3254683\|24\|CP019066\|CRT	3254683-3254706	24	NZ_CP020386	Rhodovulum sp. MB263 plasmid pRSMBB, complete sequence	52958-52981	3	0.875
CP019066_4	4.3\|3254683\|24\|CP019066\|CRT	3254683-3254706	24	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1346811-1346834	3	0.875
CP019066_4	4.3\|3254683\|24\|CP019066\|CRT	3254683-3254706	24	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	386503-386526	3	0.875
CP019066_4	4.3\|3254683\|24\|CP019066\|CRT	3254683-3254706	24	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	418573-418596	3	0.875
CP019066_4	4.3\|3254683\|24\|CP019066\|CRT	3254683-3254706	24	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	611960-611983	3	0.875
CP019066_4	4.3\|3254683\|24\|CP019066\|CRT	3254683-3254706	24	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	219780-219803	3	0.875
CP019066_4	4.3\|3254683\|24\|CP019066\|CRT	3254683-3254706	24	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1635727-1635750	3	0.875
CP019066_4	4.3\|3254683\|24\|CP019066\|CRT	3254683-3254706	24	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	131808-131831	3	0.875
CP019066_4	4.3\|3254683\|24\|CP019066\|CRT	3254683-3254706	24	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1201581-1201604	3	0.875
CP019066_4	4.3\|3254683\|24\|CP019066\|CRT	3254683-3254706	24	NC_014159	Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence	94851-94874	3	0.875
CP019066_4	4.2\|3254626\|24\|CP019066\|CRT	3254626-3254649	24	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	388445-388468	4	0.833
CP019066_4	4.5\|3254794\|33\|CP019066\|CRT	3254794-3254826	33	MT498037	Streptomyces phage Dryad, complete genome	48635-48667	6	0.818
CP019066_4	4.5\|3254794\|33\|CP019066\|CRT	3254794-3254826	33	NC_021347	Rhodococcus phage E3, complete genome	92823-92855	7	0.788
CP019066_5	5.1\|3607465\|32\|CP019066\|CRISPRCasFinder	3607465-3607496	32	NZ_CP014678	Kozakia baliensis strain DSM 14400 plasmid pKB14400_4, complete sequence	15861-15892	7	0.781
CP019066_1	1.1\|224575\|37\|CP019066\|CRISPRCasFinder	224575-224611	37	NC_049468	Arthrobacter phage Zartrosa, complete genome	31139-31175	8	0.784
CP019066_1	1.1\|224575\|37\|CP019066\|CRISPRCasFinder	224575-224611	37	NC_022995	Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence	229971-230007	8	0.784
CP019066_4	4.5\|3254794\|33\|CP019066\|CRT	3254794-3254826	33	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	161338-161370	8	0.758
CP019066_4	4.5\|3254794\|33\|CP019066\|CRT	3254794-3254826	33	NC_017536	Oligotropha carboxidovorans OM4 plasmid pHCG3B, complete sequence	91715-91747	8	0.758
CP019066_4	4.5\|3254794\|33\|CP019066\|CRT	3254794-3254826	33	NC_015689	Oligotropha carboxidovorans OM5 plasmid pHCG3, complete sequence	91717-91749	8	0.758
CP019066_4	4.5\|3254794\|33\|CP019066\|CRT	3254794-3254826	33	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	184951-184983	8	0.758
CP019066_4	4.5\|3254794\|33\|CP019066\|CRT	3254794-3254826	33	NZ_CP025548	Mycobacterium paragordonae strain 49061 plasmid unnamed2, complete sequence	87020-87052	9	0.727
CP019066_6	6.1\|4276760\|32\|CP019066\|CRISPRCasFinder	4276760-4276791	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1703525-1703556	9	0.719

1. spacer 1.1|224575|37|CP019066|CRISPRCasFinder matches to NZ_LR134454 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence) position: , mismatch: 0, identity: 1.0

tgcccgcggcgttgccgccggcctgctggttgccgcc	CRISPR spacer
tgcccgcggcgttgccgccggcctgctggttgccgcc	Protospacer
*************************************

2. spacer 2.1|937154|52|CP019066|CRISPRCasFinder matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 0, identity: 1.0

ttcgagcccccaccggaggaacggcgcctgatgggggacggaacgccggggt	CRISPR spacer
ttcgagcccccaccggaggaacggcgcctgatgggggacggaacgccggggt	Protospacer
****************************************************

3. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 0, identity: 1.0

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggcgggggccttggtcgccgc	Protospacer
************************

4. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 0, identity: 1.0

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggcgggggccttggtcgccgc	Protospacer
************************

5. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 0, identity: 1.0

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggcgggggccttggtcgccgc	Protospacer
************************

6. spacer 4.4|3254740|21|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 0, identity: 1.0

cgcgggcgccttggtcgccgc	CRISPR spacer
cgcgggcgccttggtcgccgc	Protospacer
*********************

7. spacer 4.5|3254794|33|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 0, identity: 1.0

cgcgggggcggccttcgtcgccttggccggggc	CRISPR spacer
cgcgggggcggccttcgtcgccttggccggggc	Protospacer
*********************************

8. spacer 5.1|3607465|32|CP019066|CRISPRCasFinder matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 0, identity: 1.0

cggagatgcaagggggacggctccggacctac	CRISPR spacer
cggagatgcaagggggacggctccggacctac	Protospacer
********************************

9. spacer 3.1|1650337|35|CP019066|CRISPRCasFinder matches to NZ_LR134452 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence) position: , mismatch: 1, identity: 0.971

gtcgggggcgaagaccgggccccgccccggcggac	CRISPR spacer
gtcgggggcgaagaccgggccccgcctcggcggac	Protospacer
**************************.********

10. spacer 3.1|1650337|35|CP019066|CRISPRCasFinder matches to NZ_LR134452 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence) position: , mismatch: 1, identity: 0.971

gtcgggggcgaagaccgggccccgccccggcggac	CRISPR spacer
gtcgggggcgaagaccgggcccggccccggcggac	Protospacer
********************** ************

11. spacer 4.2|3254626|24|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 1, identity: 0.958

cttggcgggggccttggtcgcggc	CRISPR spacer
cttggcgggagccttggtcgcggc	Protospacer
*********.**************

12. spacer 4.2|3254626|24|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 1, identity: 0.958

cttggcgggggccttggtcgcggc	CRISPR spacer
cttggcgggggccttggtcgccgc	Protospacer
********************* **

13. spacer 4.2|3254626|24|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 1, identity: 0.958

cttggcgggggccttggtcgcggc	CRISPR spacer
cttggcgggggccttggtcgccgc	Protospacer
********************* **

14. spacer 4.2|3254626|24|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 1, identity: 0.958

cttggcgggggccttggtcgcggc	CRISPR spacer
cttggcgggagccttggtcgcggc	Protospacer
*********.**************

15. spacer 4.2|3254626|24|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 1, identity: 0.958

cttggcgggggccttggtcgcggc	CRISPR spacer
cttggcgggggccttggtcgccgc	Protospacer
********************* **

16. spacer 4.3|3254683|24|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 1, identity: 0.958

ggccggcgtggtcttcgccggagt	CRISPR spacer
ggccggcgtggtcttcgccggagc	Protospacer
***********************.

17. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 2, identity: 0.917

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggcgggagccttggtcgcggc	Protospacer
*********.*********** **

18. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 2, identity: 0.917

cttggcgggggccttggtcgccgc	CRISPR spacer
cttcgcgggcgccttggtcgccgc	Protospacer
*** ***** **************

19. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 2, identity: 0.917

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggcgggagccttggtcgcggc	Protospacer
*********.*********** **

20. spacer 4.1|3254569|24|CP019066|CRT matches to MH669000 (Gordonia phage Ali17, complete genome) position: , mismatch: 2, identity: 0.917

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggcgggggccggggtcgccgc	Protospacer
*************  *********

21. spacer 4.2|3254626|24|CP019066|CRT matches to NZ_AP018516 (Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence) position: , mismatch: 2, identity: 0.917

cttggcgggggccttggtcgcggc	CRISPR spacer
cttggcgggggccttgcgcgcggc	Protospacer
****************  ******

22. spacer 4.3|3254683|24|CP019066|CRT matches to NC_048047 (Caulobacter phage CcrBL9, complete genome) position: , mismatch: 2, identity: 0.917

ggccggcgtggtcttcgccggagt	CRISPR spacer
ggccggcgtggtcttcaccggcgt	Protospacer
****************.**** **

23. spacer 4.4|3254740|21|CP019066|CRT matches to NZ_CP028919 (Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.905

cgcgggcgccttggtcgccgc	CRISPR spacer
ggcgggcgccttggtcgccga	Protospacer
 *******************

24. spacer 4.1|3254569|24|CP019066|CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgccgc	CRISPR spacer
ctttgcgggggccttggtcgcctt	Protospacer
*** ****************** .

25. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggccggggccatggtcgccga	Protospacer
****** ****** *********

26. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggccggggccatggtcgccga	Protospacer
****** ****** *********

27. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_CP014308 (Burkholderia sp. PAMC 26561 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggcgggggagttggtcgccga	Protospacer
***********  **********

28. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_CP014308 (Burkholderia sp. PAMC 26561 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggcgggggagttggtcgccga	Protospacer
***********  **********

29. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_CP014309 (Burkholderia sp. PAMC 26561 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggcgggggagttggtcgccga	Protospacer
***********  **********

30. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_CP014309 (Burkholderia sp. PAMC 26561 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggcgggggagttggtcgccga	Protospacer
***********  **********

31. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_CP032687 (Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgccgc	CRISPR spacer
tttggcgccggccttggtcgccgc	Protospacer
.******  ***************

32. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_CP032692 (Rhizobium sp. CCGE532 plasmid pRCCGE532b, complete sequence) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgccgc	CRISPR spacer
tttggcgccggccttggtcgccgc	Protospacer
.******  ***************

33. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggccggggccatggtcgccga	Protospacer
****** ****** *********

34. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_CP014510 (Burkholderia sp. PAMC 28687 plasmid 3, complete sequence) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggcgggggagttggtcgccga	Protospacer
***********  **********

35. spacer 4.1|3254569|24|CP019066|CRT matches to NC_020061 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgccgc	CRISPR spacer
tttggcgccggccttggtcgccgc	Protospacer
.******  ***************

36. spacer 4.1|3254569|24|CP019066|CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgccgc	CRISPR spacer
cttggccggggccatggtcgccga	Protospacer
****** ****** *********

37. spacer 4.2|3254626|24|CP019066|CRT matches to JQ807249 (Environmental Halophage eHP-30, partial genome) position: , mismatch: 3, identity: 0.875

cttggcgggggccttggtcgcggc	CRISPR spacer
cttggcggtggccttggtggcggt	Protospacer
******** ********* ****.

38. spacer 4.3|3254683|24|CP019066|CRT matches to NZ_CP020386 (Rhodovulum sp. MB263 plasmid pRSMBB, complete sequence) position: , mismatch: 3, identity: 0.875

ggccggcgtggtcttcgccggagt	CRISPR spacer
ggcccgcgtggtcttcgccggata	Protospacer
**** *****************

39. spacer 4.3|3254683|24|CP019066|CRT matches to NZ_CP020386 (Rhodovulum sp. MB263 plasmid pRSMBB, complete sequence) position: , mismatch: 3, identity: 0.875

ggccggcgtggtcttcgccggagt	CRISPR spacer
ggccggcgcggtcttcgccgggct	Protospacer
********.************. *

40. spacer 4.3|3254683|24|CP019066|CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 3, identity: 0.875

ggccggcgtggtcttcgccggagt	CRISPR spacer
ggccggcgtgttcttcgccgggct	Protospacer
********** **********. *

41. spacer 4.3|3254683|24|CP019066|CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 3, identity: 0.875

ggccggcgtggtcttcgccggagt	CRISPR spacer
tgccggcgtggtctgcgccggact	Protospacer
 ************* ******* *

42. spacer 4.3|3254683|24|CP019066|CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 3, identity: 0.875

ggccggcgtggtcttcgccggagt	CRISPR spacer
tgccggcgtggtctgcgccggact	Protospacer
 ************* ******* *

43. spacer 4.3|3254683|24|CP019066|CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 3, identity: 0.875

ggccggcgtggtcttcgccggagt	CRISPR spacer
ggccggcgcggtcttcgccggcgc	Protospacer
********.************ *.

44. spacer 4.3|3254683|24|CP019066|CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 3, identity: 0.875

ggccggcgtggtcttcgccggagt	CRISPR spacer
ggccgacgtggtcttcgccggggc	Protospacer
*****.***************.*.

45. spacer 4.3|3254683|24|CP019066|CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.875

ggccggcgtggtcttcgccggagt	CRISPR spacer
ggccggcgtgttcttcgccgggct	Protospacer
********** **********. *

46. spacer 4.3|3254683|24|CP019066|CRT matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 3, identity: 0.875

ggccggcgtggtcttcgccggagt	CRISPR spacer
ggccggcgtggtcttcgcggcagg	Protospacer
****************** * **

47. spacer 4.3|3254683|24|CP019066|CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 3, identity: 0.875

ggccggcgtggtcttcgccggagt	CRISPR spacer
ggccggcgcggtcttcgccggcgc	Protospacer
********.************ *.

48. spacer 4.3|3254683|24|CP019066|CRT matches to NC_014159 (Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence) position: , mismatch: 3, identity: 0.875

ggccggcgtggtcttcgccggagt	CRISPR spacer
ggccggcctggtcttcgccggcgg	Protospacer
******* ************* *

49. spacer 4.2|3254626|24|CP019066|CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 4, identity: 0.833

cttggcgggggccttggtcgcggc	CRISPR spacer
ctttgcgggggccttggtcgcctt	Protospacer
*** *****************  .

50. spacer 4.5|3254794|33|CP019066|CRT matches to MT498037 (Streptomyces phage Dryad, complete genome) position: , mismatch: 6, identity: 0.818

cgcgggggcggccttcgtcgccttggccggggc	CRISPR spacer
ggcggcggcggccttcttcgccttggcctccgc	Protospacer
 **** ********** ***********   **

51. spacer 4.5|3254794|33|CP019066|CRT matches to NC_021347 (Rhodococcus phage E3, complete genome) position: , mismatch: 7, identity: 0.788

cgcgggggcggccttcgtcgccttggccggggc	CRISPR spacer
cggcagggcgaccttcgtcgccatggccgggag	Protospacer
**  .*****.*********** ********.

52. spacer 5.1|3607465|32|CP019066|CRISPRCasFinder matches to NZ_CP014678 (Kozakia baliensis strain DSM 14400 plasmid pKB14400_4, complete sequence) position: , mismatch: 7, identity: 0.781

cggagatgcaagggggacggctccggacctac	CRISPR spacer
cgccgatgcaacggggacggctccggacggta	Protospacer
**  ******* ****************

53. spacer 1.1|224575|37|CP019066|CRISPRCasFinder matches to NC_049468 (Arthrobacter phage Zartrosa, complete genome) position: , mismatch: 8, identity: 0.784

tgcccgcggcgttgccgccggcctgctggttgccgcc	CRISPR spacer
cgccgctgtagttcccgccgccctgctggttgccgcc	Protospacer
.***  .*  *** ****** ****************

54. spacer 1.1|224575|37|CP019066|CRISPRCasFinder matches to NC_022995 (Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence) position: , mismatch: 8, identity: 0.784

tgcccgcggcgttgccgccggcctg--ctggttgccgcc	CRISPR spacer
tgcccgaggcgttgccgcccgcctgcacggcctgctg--	Protospacer
****** ************ *****  * * .***.*

55. spacer 4.5|3254794|33|CP019066|CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 8, identity: 0.758

cgcgggggcggccttcgtcgccttggccggggc	CRISPR spacer
ggcggcggccgccttcgtcgccttggcgctttc	Protospacer
 **** *** *****************     *

56. spacer 4.5|3254794|33|CP019066|CRT matches to NC_017536 (Oligotropha carboxidovorans OM4 plasmid pHCG3B, complete sequence) position: , mismatch: 8, identity: 0.758

cgcgggggcggccttcgtcgccttggccggggc	CRISPR spacer
cgcggcggcggccttcgccgccttcagcctgtc	Protospacer
***** ***********.****** . *  * *

57. spacer 4.5|3254794|33|CP019066|CRT matches to NC_015689 (Oligotropha carboxidovorans OM5 plasmid pHCG3, complete sequence) position: , mismatch: 8, identity: 0.758

cgcgggggcggccttcgtcgccttggccggggc	CRISPR spacer
cgcggcggcggccttcgccgccttcagcctgtc	Protospacer
***** ***********.****** . *  * *

58. spacer 4.5|3254794|33|CP019066|CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.758

cgcgggggcggccttcgtcgccttggccggggc	CRISPR spacer
cagcgccgcggccgtcgtcgccttgaccgggtc	Protospacer
*.  *  ****** ***********.***** *

59. spacer 4.5|3254794|33|CP019066|CRT matches to NZ_CP025548 (Mycobacterium paragordonae strain 49061 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

cgcgggggcggccttcgtcgccttggccggggc	CRISPR spacer
ggtgacggtggccttcgtcgacttggccggcta	Protospacer
 *.*. **.*********** *********

60. spacer 6.1|4276760|32|CP019066|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 9, identity: 0.719

caccgaactgccccggcgtcccgcgggggagt	CRISPR spacer
cggcgaactgcccctgcgtcgcgcggttggcc	Protospacer
*. *********** ***** *****  *. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4509862 : 4522480

uncultured_Mediterranean_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUN42374.1\|4509862_4511479_+	hypothetical protein	A0A285PXS3	Cedratvirus	2.9e-15	31.8
AUN42375.1\|4511485_4512706_-	DNA polymerase III subunit delta'	D9ZNI9	Clostridium_phage	8.3e-07	28.8
AUN43228.1\|4512791_4514288_+	adenylate/guanylate cyclase domain-containing protein	A0A1B1IWY2	uncultured_Mediterranean_phage	2.9e-17	31.9
AUN42376.1\|4514288_4517249_-	DNA topoisomerase I	J3E777	Acanthamoeba_polyphaga_lentillevirus	2.5e-97	34.8
AUN42377.1\|4517403_4517871_-	MarR family transcriptional regulator	NA	NA	NA	NA
AUN42378.1\|4518879_4519458_-	hypothetical protein	NA	NA	NA	NA
AUN42379.1\|4519592_4519796_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	2.3e-15	60.9
AUN43229.1\|4520206_4522480_+	DEAD/DEAH box helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	2.6e-09	30.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP019066

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection