CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP025776	Enterobacter sp. EA-1 chromosome, complete genome	3 crisprs	NA	0	0	0	0

Cas Category Instructions

Results visualization

1. CP025776

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CRISPR-Cas detection and classification

Crispr_ID: CP025776_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025776_2

639681-639841

Orphan

Consensus_repeat	Method
CGGTCAGTTTCAATTTTTTCAGGTAAAAACCCGCTTCGGCGGGTTTTGCTTTCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025776_2

>merge|CP025776|2|639681-639841|CRISPRCasFinder
CGGTCAGTTTCAATTTTTTCAGGTAAAAACCCGCTTCGGCGGGTTTTGCTTTCTGCGGTGCAGAGAATGACTGTCCACTCCGCTTTCTATGAGAGAACGCGGCTCACCGGTCAGTTTCAATTTTTTCAGGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTC

>CP025776|2|2|639681-639841|CRISPRCasFinder
CGGTCAGTTTCAATTTTTTCAGGTAAAAACCCGCTTCGGCGGGTTTTGCTTTCT	GCGGTGCAGAGAATGACTGTCCACTCCGCTTTCTATGAGAGAACGCGGCTCAC
CGGTCAGTTTCAATTTTTTCAGGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTC

Protein	Signature genes	Signature genes Name	Protein_function
CP025776.1\|AUP76260.1\|621877_622795_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968
CP025776.1\|AUP76258.1\|593984_594242_+\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464
CP025776.1\|AUP76254.1\|575167_575494_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236842
CP025776.1\|AUP76268.1\|673338_673524_-\|hypothetical-protein	unknown	unknown	unknown
CP025776.1\|AUP76266.1\|662529_663294_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|235546
CP025776.1\|AUP77128.1\|613569_613839_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
CP025776.1\|AUP76267.1\|668813_669092_+\|hypothetical-protein	unknown	unknown	unknown
CP025776.1\|AUP76263.1\|640697_641063_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378915
CP025776.1\|AUP77129.1\|655878_656847_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274743
CP025776.1\|AUP76257.1\|593653_593965_+\|50S-ribosomal-protein-L21	unknown	unknown	gnl\|CDD\|235510
CP025776.1\|AUP76262.1\|629493_629889_-\|YraN-family-protein	unknown	unknown	gnl\|CDD\|129354
CP025776.1\|AUP76256.1\|584908_585196_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182814
CP025776.1\|AUP76270.1\|685806_686100_+\|hypothetical-protein	unknown	unknown	unknown
CP025776.1\|AUP76259.1\|600028_600286_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182683
CP025776.1\|AUP76271.1\|691026_691242_-\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
CP025776.1\|AUP76261.1\|625044_625323_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979
CP025776.1\|AUP76265.1\|662068_662527_+\|S-ribosylhomocysteine-lyase	unknown	unknown	gnl\|CDD\|179399
CP025776.1\|AUP76264.1\|646909_647266_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227681
CP025776.1\|AUP76255.1\|584602_584866_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182814
CP025776.1\|AUP76269.1\|685037_685382_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP025776.1\|AUP76260.1\|621877_622795_-\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
CP025776.1\|AUP76258.1\|593984_594242_+\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	4.74567e-55
CP025776.1\|AUP76254.1\|575167_575494_+\|hypothetical-protein	gnl\|CDD\|236842	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional.	2.46099e-60
CP025776.1\|AUP76266.1\|662529_663294_+\|oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	7.01601e-75
CP025776.1\|AUP77128.1\|613569_613839_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	1.31854e-53
CP025776.1\|AUP76263.1\|640697_641063_-\|hypothetical-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	0.000133419
CP025776.1\|AUP77129.1\|655878_656847_-\|hypothetical-protein	gnl\|CDD\|274743	TIGR03718, R_switched_Alx, integral membrane protein, TerC family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains TerC itself from Alcaligenes sp. plasmid IncHI2 pMER610 and from Proteus mirabilis. It also contains the alkaline-inducible E. coli protein Alx, which unlike the two TerC examples is preceded by a yybP-ykoY leader.	2.82953e-139
CP025776.1\|AUP76257.1\|593653_593965_+\|50S-ribosomal-protein-L21	gnl\|CDD\|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	1.95834e-51
CP025776.1\|AUP76262.1\|629493_629889_-\|YraN-family-protein	gnl\|CDD\|129354	TIGR00252, UPF0102_protein_HI_1656, TIGR00252 family protein. the scores for Mycobacterium tuberculosis and Treponema pallidum are low considering the alignment [Hypothetical proteins, Conserved].	5.6156e-54
CP025776.1\|AUP76256.1\|584908_585196_-\|hypothetical-protein	gnl\|CDD\|182814	PRK10892, PRK10892, arabinose-5-phosphate isomerase KdsD.	1.13395e-48
CP025776.1\|AUP76259.1\|600028_600286_+\|hypothetical-protein	gnl\|CDD\|182683	PRK10733, hflB, ATP-dependent zinc metalloprotease FtsH.	1.90159e-22
CP025776.1\|AUP76261.1\|625044_625323_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	1.76338e-37
CP025776.1\|AUP76265.1\|662068_662527_+\|S-ribosylhomocysteine-lyase	gnl\|CDD\|179399	PRK02260, PRK02260, S-ribosylhomocysteine lyase.	1.7741e-81
CP025776.1\|AUP76264.1\|646909_647266_-\|hypothetical-protein	gnl\|CDD\|227681	COG5393, COG5393, Predicted membrane protein [Function unknown].	1.66066e-46
CP025776.1\|AUP76255.1\|584602_584866_-\|hypothetical-protein	gnl\|CDD\|182814	PRK10892, PRK10892, arabinose-5-phosphate isomerase KdsD.	1.73358e-50
CP025776.1\|AUP76271.1\|691026_691242_-\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	8.25342e-17

>CP025776.1|AUP76262.1|629493_629889_-|YraN-family-protein
MAQIPAGANRPGELSRKQTGDAWEAKARCWLESKGLQFIAANVRERGGEIDLIMRHNHTTVFIEVRYRRSGRFGGALSSVTRTKQVKLLHTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIQNAFNDHS
>CP025776.1|AUP76261.1|625044_625323_-|GIY-YIG-nuclease-family-protein
MRTPDNALYTGITTDVARRFTQHQNGKGAKALRGKGVLELVFSAQVGDKSIALRLEYRIKQLTKRQKERLVAGDGSFEALQESLLSPAVTGD
>CP025776.1|AUP76260.1|621877_622795_-|U32-family-peptidase
MKYSLGPVLYYWSKETLEDFYRRAANSTADIIYLGEAVCSKRRATKVGDWLDMAKELATSGKQVVLSTLALVQASSELNELKRYVDNGEFLLEASDLGVVNMCADRKLPFVAGHALNCYNAVTLRLLLKQGMVRWCMPVELSRDWLINLLDQCDALGIRQQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRSMLSQENQQVFVLNGIQTMSGYVYNLGNELTSMNGIVDVVRLSPMGNDTFTMLDAFRRNETGASPLPLASNSDCNGYWRRLPGTGAATVKRLKLLTAISKG
>CP025776.1|AUP77128.1|613569_613839_+|30S-ribosomal-protein-S15
MSLSVEAKAKIVSEFGRGSNDSGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTALIERLGLRR
>CP025776.1|AUP76259.1|600028_600286_+|hypothetical-protein
MSDMAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNRTRGFVKRVSTDVRSTLPRKIVTVTRLTSRSTIQNCSTTC
>CP025776.1|AUP76258.1|593984_594242_+|50S-ribosomal-protein-L27
MAHKKAGGSTRNGRDSEAKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGTNVGCGRDHTLFALTDGKVKFEVKGPKNRKFISIVAE
>CP025776.1|AUP76257.1|593653_593965_+|50S-ribosomal-protein-L21
MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEIVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
>CP025776.1|AUP76256.1|584908_585196_-|hypothetical-protein
MTFNRQEKRSSEIEREGLAELDQYINEDFAQACEKMFYCAGKVVVMGMGKSGHIGRKMAATFASTGTSSFFVHPGEAASWRFGDGQSARYRDCAV
>CP025776.1|AUP76255.1|584602_584866_-|hypothetical-protein
MKRLKVSLICMTSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLKARGFTAEDFALSHRRRTGSQTAAAG
>CP025776.1|AUP76254.1|575167_575494_+|hypothetical-protein
MRWSAPAGDKTTFISTISHELRTPLNGIVGLSRILLDTELTEEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPLDFTSFGGLGKSLRLAGASERAAFCA
>CP025776.1|AUP76263.1|640697_641063_-|hypothetical-protein
MALHSIVCNPEHDEAKIREFFSPQYRQYVDGESLDFRSFVEHMAKLKQLAESIEVTMIAIAGQHQDVLTHHRVAVSKKGGGVSHVDVTAHFTLQDGLIIRCEELTRLIQGAAEDRSLGHIR
>CP025776.1|AUP76264.1|646909_647266_-|hypothetical-protein
MGIGQRILTILVEMVETRLRLAVVELEEEKANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAIDPQYRLNAMIATTVVLLVLALIGGIWTLRKARASTLLRHTRQELANDRALLEDEKP
>CP025776.1|AUP77129.1|655878_656847_-|hypothetical-protein
MNSVGTPMLWGGFAIVVAIMLAIDLLLQGRRGVHTMTMKQAAVWSVVWVSLSLLFNAAFWWYLTQTEGRAVADTQALAFLTGYLIEKALAVDNVFVWLMLFSYFAVPAALQRRVLIYGVLGAIVLRTIMIFAGSWLISQFSWLLYVFGAFLLFTGVKMALAKEDETGIGDKPLVRWLRGHLRMTDSIENEHFFVRKNGLLFATPLLLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLSVILVFIGIKMLIVDFFHIPIAISLGVVGGILVMTLLINARVNYRNDKKNVAS
>CP025776.1|AUP76265.1|662068_662527_+|S-ribosylhomocysteine-lyase
MPVVESFTLDHTKVKAPYVRVAGLERHALGSVVQKFDLRFLQPNADAIPTAALHTLEHLLAFGLREELDGVIDISPMGCRTGFYLILWDEHPPADIAAALTRVLRRVLDATDVPAVTPLACGNYRDHSLFSAQEYAKWVLDAGISDDPFRRG
>CP025776.1|AUP76266.1|662529_663294_+|oxidoreductase
MIALDFSGQTAVVSGGLQGIGKAIADLLHIGGANVVVGDIAVVKPERDRRYVVQPCDVASRTDAQALITTAEEVFGGVDILVNSCGVSAMSPVDAMQERDWQRILDVNVKGLSYLSEAAIRIMKTQRAGRIINIASQAGKNGYRLMGQYVASKHAVLGLTRVMAIELAQHNIPPVNAVCPGIVETEMKWRERQQGAALRGLTADDIYAEDCSQVLLGRTAQPLDVANVVAFLASPLASYMTGQAINVTGGMTMH
>CP025776.1|AUP76267.1|668813_669092_+|hypothetical-protein
MMMIFSLLWGEDRGEGCYLPTPETGDDDFSLSPPVGERAGVRGCSFPTGRGDDDFLSLPCGGESWGEGIFFSHRERELRIIFSLSPVGRGLG
>CP025776.1|AUP76268.1|673338_673524_-|hypothetical-protein
MHIPVLPSVFIPIFVTRARSGVIPAILKSVSCDTRAPGAHFEQVTFQRIGFSVQRSRIKSH
>CP025776.1|AUP76269.1|685037_685382_-|hypothetical-protein
MEHNAYRLADVTLNGNEPCISVSNDATVKSGHAKLLILSLSVRDAKGQMQEVWKQDNFNTPSYTLQAGECIPVNYRFKRDEEYSVTVITAQPADKVATKRLWSRNFKLNDLAPK
>CP025776.1|AUP76270.1|685806_686100_+|hypothetical-protein
MVADRDKEENEKTKKKLAYVVLSIIFFLIIPEVVLRVVSTDDLGRLSDYTSLWGTLNPLLSLLISLGLASFILAFLTVFIVGKIFRALSRLGLNQRS
>CP025776.1|AUP76271.1|691026_691242_-|30S-ribosomal-protein-S21
MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENARRTRLY

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Crispr_ID: CP025776_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025776_3

1462023-1462180

Orphan

Consensus_repeat	Method
CCCCCTCCTTGTAAGGAGGTGCTCTCCCAGCTGAGCTAATCACCCACTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025776_3

>merge|CP025776|3|1462023-1462180|CRISPRCasFinder
CCCCCTCCTTGTAAGGAGGTGCTCTCCCAGCTGAGCTAATCACCCACTTCGGTACTTCACTGATAAGAATTCGCTGGCGAGAAGTGGTGTGGACGGATCGAACCGGCCCCCCTCCTTGTAAGGGAGGTGCTCTCCCAGCTGAGCTAATCACCCACTTC

>CP025776|3|3|1462023-1462180|CRISPRCasFinder
CCCCCTCCTTGTAAGGAGGTGCTCTCCCAGCTGAGCTAATCACCCACTTC	GGTACTTCACTGATAAGAATTCGCTGGCGAGAAGTGGTGTGGACGGATCGAACCGGCC
CCCCTCCTTGTAAGGGAGGTGCTCTCCCAGCTGAGCTAATCACCCACTTC

Protein	Signature genes	Signature genes Name	Protein_function
CP025776.1\|AUP76435.1\|1527798_1528125_-\|DUF2502-domain-containing-protein	unknown	unknown	gnl\|CDD\|371199
CP025776.1\|AUP77142.1\|1404565_1405114_-\|hydrogenase-4-subunit-H	unknown	unknown	gnl\|CDD\|181301
CP025776.1\|AUP76433.1\|1516403_1516601_-\|hypothetical-protein	unknown	unknown	unknown
CP025776.1\|AUP76425.1\|1453869_1454598_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273465
CP025776.1\|AUP76421.1\|1391510_1391834_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223924
CP025776.1\|AUP77143.1\|1458985_1459162_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378970
CP025776.1\|AUP77144.1\|1520960_1521302_+\|RamA-family-antibiotic-efflux-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182314
CP025776.1\|AUP76424.1\|1443997_1444891_+\|peroxidase	unknown	unknown	gnl\|CDD\|367887
CP025776.1\|AUP77141.1\|1391942_1392017_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235469
CP025776.1\|AUP76422.1\|1392411_1393047_-\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|235544
CP025776.1\|AUP76430.1\|1481045_1481720_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367142
CP025776.1\|AUP76423.1\|1442187_1442367_+\|hypothetical-protein	unknown	unknown	unknown
CP025776.1\|AUP76432.1\|1487673_1488072_+\|hypothetical-protein	unknown	unknown	unknown
CP025776.1\|AUP76434.1\|1516740_1517655_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340879
CP025776.1\|AUP76427.1\|1466024_1466216_+\|hypothetical-protein	unknown	unknown	unknown
CP025776.1\|AUP76428.1\|1468666_1468876_-\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|137782
CP025776.1\|AUP76420.1\|1390691_1391357_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235469
CP025776.1\|AUP76431.1\|1486325_1486544_-\|hypothetical-protein	unknown	unknown	unknown
CP025776.1\|AUP76426.1\|1455852_1456098_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235124
CP025776.1\|AUP76429.1\|1471442_1472195_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237407

Protein	Function_ID	Function_description	E-value
CP025776.1\|AUP76435.1\|1527798_1528125_-\|DUF2502-domain-containing-protein	gnl\|CDD\|371199	pfam10697, DUF2502, Protein of unknown function (DUF2502). Members of this family are all Gammaproteobacteria. The function is not known.	1.09078e-13
CP025776.1\|AUP76425.1\|1453869_1454598_-\|hypothetical-protein	gnl\|CDD\|273465	TIGR01139, Cysteine_synthase, cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate. [Amino acid biosynthesis, Serine family].	9.34718e-107
CP025776.1\|AUP76421.1\|1391510_1391834_-\|hypothetical-protein	gnl\|CDD\|223924	COG0855, Ppk, Polyphosphate kinase [Inorganic ion transport and metabolism].	8.05947e-30
CP025776.1\|AUP77143.1\|1458985_1459162_+\|hypothetical-protein	gnl\|CDD\|378970	pfam12843, QSregVF_b, Putative quorum-sensing-regulated virulence factor. QSregVF_b is a family of short Pseudomonas proteins that are potential virulence factors. The structure of UniProtKB:Q9HY15 a secreted protein has been solved and deposited as Structure 3npd, from pfam13652. It is predicted that these two adjacent proteins form a single transcriptional unit based on the prediction that together they interact with their adjacent protein PotD, which is the putrescine-binding periplasmic protein in the polyamine uptake system comprising PotABCD. These two adjacent proteins are predicted to be quroum-sensing-regulated virulence factors.	1.12556e-25
CP025776.1\|AUP77144.1\|1520960_1521302_+\|RamA-family-antibiotic-efflux-transcriptional-regulator	gnl\|CDD\|182314	PRK10219, PRK10219, superoxide response transcriptional regulator SoxS.	3.82314e-37
CP025776.1\|AUP76424.1\|1443997_1444891_+\|peroxidase	gnl\|CDD\|367887	pfam04261, Dyp_perox, Dyp-type peroxidase family. This family of dye-decolourising peroxidases lack a typical heme-binding region.	1.63257e-124
CP025776.1\|AUP77141.1\|1391942_1392017_-\|hypothetical-protein	gnl\|CDD\|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	2.31721e-05
CP025776.1\|AUP76422.1\|1392411_1393047_-\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|235544	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed.	1.29853e-109
CP025776.1\|AUP76430.1\|1481045_1481720_+\|hypothetical-protein	gnl\|CDD\|367142	pfam02682, CT_C_D, Carboxyltransferase domain, subdomain C and D. Urea carboxylase (UC) catalyzes a two-step, ATP- and biotin-dependent carboxylation reaction of urea. It is composed of biotin carboxylase (BC), carboxyltransferase (CT), and biotin carboxyl carrier protein (BCCP) domains. The CT domain of UC consists of four subdomains, named A, B, C and D. This domain covers the C and D subdomains of the CT domain. This domain covers the whole length of kipI (kinase A inhibitor) from Bacillus subtilis. It can also be found in S. cerevisiae urea amidolyase Dur1,2, which is a multifunctional biotin-dependent enzyme with domains for urea carboxylase and allophanate (urea carboxylate) hydrolase activity.	1.62168e-15
CP025776.1\|AUP77142.1\|1404565_1405114_-\|hydrogenase-4-subunit-H	gnl\|CDD\|181301	PRK08222, PRK08222, hydrogenase 4 subunit H; Validated.	3.85372e-99
CP025776.1\|AUP76434.1\|1516740_1517655_-\|hypothetical-protein	gnl\|CDD\|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.98976e-39
CP025776.1\|AUP76428.1\|1468666_1468876_-\|DUF1471-domain-containing-protein	gnl\|CDD\|137782	PRK10259, PRK10259, hypothetical protein; Provisional.	0.00310457
CP025776.1\|AUP76420.1\|1390691_1391357_-\|hypothetical-protein	gnl\|CDD\|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	4.08183e-112
CP025776.1\|AUP76426.1\|1455852_1456098_+\|hypothetical-protein	gnl\|CDD\|235124	PRK03427, PRK03427, cell division protein ZipA; Provisional.	1.55944e-54
CP025776.1\|AUP76429.1\|1471442_1472195_-\|hypothetical-protein	gnl\|CDD\|237407	PRK13516, PRK13516, gamma-glutamyl:cysteine ligase; Provisional.	4.9888e-129

>CP025776.1|AUP77143.1|1458985_1459162_+|hypothetical-protein
MPFGKYQGRRLIDLPEEYLLWFARKEAFPAGRLGELLQITLLIKTEGLSHLVQPLKRR
>CP025776.1|AUP76426.1|1455852_1456098_+|hypothetical-protein
MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRMKSRRDDEELYDEDVEDDDEGVGEVRVHKVNTAPKSYK
>CP025776.1|AUP76425.1|1453869_1454598_-|hypothetical-protein
MKCRIGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKATGCQPGVDRRRERHERRDSKAEEIVASDPAKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKNTKGKTDLITVAVEPTDSPVISQALAGEELETGPHKIQGIGAGFIPGNPGFETDRQSCQNHQRRSHQHCTSSDGRRRYPWRVFLPVRLWPLH
>CP025776.1|AUP76424.1|1443997_1444891_+|peroxidase
MSQVQSGILPEHCRAAIWIEASVKGDTDALRAGSKAFADKLATFQTTFPDANLGAVVAFGNTVWRALSGGEGAAELKDYPSYGKGLAPATQHDVLIHILSLRHDVNFSVAQAALDAFGDALEVKEETHGFRWVEDRDLSGFVDGTENPSGAEKRRDVAIIQDGVDAGGSYVMVQRWEHNLKQLNRMSVGDQEMMIGRTKEANEEIDGDARPVTSHLTRVDLKEDGKGLKIVRQSLPYGTASGTQSLFCYCARLYNIEQQLLSMFGDVDGKRDAMLRFTRPVTGGYYFAPSLDRLLAL
>CP025776.1|AUP76423.1|1442187_1442367_+|hypothetical-protein
MLIQPGVVLSVVPRCYIVSCLPLRQSVRTIVLLFISIRDRVTLCHFSTANSLDIGYGGA
>CP025776.1|AUP77142.1|1404565_1405114_-|hydrogenase-4-subunit-H
MLKLLKTILRAGEVTVKYPFAPLEVCPGFRGKPELDPQQCIACGACTTACPANALTMETHADENSRVWQLFIGRCIYCGRCEEVCPTRAIHLSEEFELAVTNKADLYVRATFRLQHCSRCGVPFAPEKSVALAVELLTLNQNAPELADTLRAQACICPACRRRDALEHRGSVNVHYYLEEQA
>CP025776.1|AUP76422.1|1392411_1393047_-|phosphoribosylglycinamide-formyltransferase
MKNIVVLISGTEAICRQLLMPANRRKINGTLRAVFSNKADAFGLERAREAAIPAHALTADQFASRDAFDRELMLEIDAYAPDLVVLAGYMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQVLENGDEEHGTTVHFVTDELDGGPVILQAKVPVFDGDTEEEITDRVQAQEHAIYPLVVSWFVDGRLKMENNATLAGWRLLTAAGLCG
>CP025776.1|AUP77141.1|1391942_1392017_-|hypothetical-protein
MYSNNLDEFYKVRFAELETPADHQ
>CP025776.1|AUP76421.1|1391510_1391834_-|hypothetical-protein
MARNQIFLINERQLSQNQQSWLRNYFKQYLRQHITPTLINRETNLVRFLKDDYTYLAVEIIRGDNIRYALLEIPSDKVPRFVNLPPETPRRRKPMILLDNILRYCTG
>CP025776.1|AUP76420.1|1390691_1391357_-|hypothetical-protein
MRFVYQRDMPDAMVEMLREKLTISRYDSIIPGGRYHNFKDFIGFPNVGKSNLVNKPLPRLRHLWFDKFRNGFDAIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAGVQVIFSAPGLKIHAKLFLISRMEGEEVVRYAHIGTGNFNEKNRASLYRLFADHRRCTHYQ
>CP025776.1|AUP76427.1|1466024_1466216_+|hypothetical-protein
MTSSVSSPAFFASAGELAAPTRQAQQPELHDFVIFKHELKRPVLETAIQITSLFAVNKGARHH
>CP025776.1|AUP76428.1|1468666_1468876_-|DUF1471-domain-containing-protein
MKFIKTFVAVAALSTLLFRLFCTKHQRQRFHLSAAEAKIAAQAEQANASYKITSARSDNGVYMTAVLSK
>CP025776.1|AUP76429.1|1471442_1472195_-|hypothetical-protein
MQSVILQAAEHHLRICGGGTHPFQKWQRRGRCATSVITIRWRCSVIWYSRPRSLVSMHIGCPSGDDAIYLLHGLSRFVPHFIALGASPYMQGTDTRFASSRLNIFSAFPDNGHAPWVSNWQEFAGLFRRLSYTSMIESIKDLHWDIRPSPHFGTVEVRVMDRPRSHAIAGFIQALAHWLAERPFKHQERDYLLYKFNRFQACRFGLDGILTDVHTGEQCTIADSLTPLLDVCTGPISSMPVAHWMNWLMW
>CP025776.1|AUP76430.1|1481045_1481720_+|hypothetical-protein
MADSAGVYRPGGKRRGDHALYHGKSRRLLEALTLRRSAASGRWRSGSPPQDDVESLIPGVTNLLVLLRPDAGGCGRGRTTLACVSRRGNHPQANALIFRCIMAGELACDLEAVCRHTGLPASDVIRRHYQGNYTVVALGSAGLWLLTRVDPALATPRKKSTVTEYAQRHGHYRVGRRPVCRCSPGPMAERHRLCRDRGLRPTGIASGVDGSGRYHTLLPERIEL
>CP025776.1|AUP76431.1|1486325_1486544_-|hypothetical-protein
MLCQFWFVVAQSGHTGSLWLARPMKNARVAKPHCTGVFTHRHGATRASGASLRCFPAAPVIILCYVATTKQY
>CP025776.1|AUP76432.1|1487673_1488072_+|hypothetical-protein
MTGENWSLRMTSAPPSPTLMAPVIPLNRPCFEPRFARLRRARVAASSAWRTISPGVVRTLSATSYWRCFQVGALYLPLRSPAAGTVSFALSHNDTVEFDEEILCIHEDSPCLSRIISHPYCLKPFMSYTAAA
>CP025776.1|AUP76433.1|1516403_1516601_-|hypothetical-protein
MVTAGALIVNSFYRIGMRDITASDAGAGSALLSTLQQATLGLGPALLGGLFCTLSDSRTAITTPR
>CP025776.1|AUP76434.1|1516740_1517655_-|hypothetical-protein
MLPLIDTSITNVALDSITLSLHTSATQLALIVALYGVAFAVCLAMGSKLGDNLGRRRVFLWGVTLFGIASLLCGLANSVSALLAARTLQGMGAALIVPQILATLHVTLKGTAHARAISLYGGIGGVAFIIGQMGGGWLVSADIAGLGWRNAFFINVPICLLVLALSRRYIPETHSETRTRIDWHGTIALALILCCLLFPLALGPELHWPWPTQAALLALFPLAVWMRASALQQRAGLTPLLPPRLLKLHSIRFGLLIALLFFSAVRVYVLHGAHLAGRHGDDAIAISFVALGIAYFVSAGMPPN
>CP025776.1|AUP77144.1|1520960_1521302_+|RamA-family-antibiotic-efflux-transcriptional-regulator
MTISAQVIDTIVEWIDDNLHQPLRIDDIAAHAGYSKWHLQRLFLQYKGESLGRYIRERKLSLAARDLRDTDQRVYDICLKYGFDSQQTFTRIFTRTFNQPPGAYRRENHQHTH
>CP025776.1|AUP76435.1|1527798_1528125_-|DUF2502-domain-containing-protein
MFRSLILAAVLMASSPPVANAGEITLLPSIKLQIGDRDNYGNYWDGGRWRDRDYWGRNYEWRGNHWYKHDRGWHRGWDKRDAYERGYREGWNDRDDHRGPGGGRWRHH

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Crispr_ID: CP025776_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025776_4

4820032-4820112

Orphan

Consensus_repeat	Method
GCATTTCGCAAGCAGCCAATACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025776_4

>merge|CP025776|4|4820032-4820112|CRISPRCasFinder
GCATTTCGCAAGCAGCCAATACCGCTGCGGTGTGAAAGCGAAGGTATTTATTACCAAAGCATTTCGCAAGCAGCCAACACC

>CP025776|4|4|4820032-4820112|CRISPRCasFinder
GCATTTCGCAAGCAGCCAATACC	GCTGCGGTGTGAAAGCGAAGGTATTTATTACCAAA
GCATTTCGCAAGCAGCCAACACC

Protein	Signature genes	Signature genes Name	Protein_function
CP025776.1\|AUP77091.1\|4868088_4868670_+\|hypothetical-protein	unknown	unknown	unknown
CP025776.1\|AUP77088.1\|4864750_4865383_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236425
CP025776.1\|AUP77075.1\|4780362_4780680_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236362
CP025776.1\|AUP77083.1\|4825504_4825735_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369148
CP025776.1\|AUP77181.1\|4880657_4880858_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180071
CP025776.1\|AUP77074.1\|4763593_4763827_-\|hypothetical-protein	unknown	unknown	unknown
CP025776.1\|AUP77089.1\|4867456_4867729_+\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99906
CP025776.1\|AUP77076.1\|4780681_4780984_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236362
CP025776.1\|AUP77078.1\|4794347_4794980_+\|hydrolase	unknown	unknown	gnl\|CDD\|238494
CP025776.1\|AUP77084.1\|4834517_4835141_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236539
CP025776.1\|AUP77082.1\|4819728_4819914_-\|hypothetical-protein	unknown	unknown	unknown
CP025776.1\|AUP77180.1\|4759536_4759875_-\|cupin	unknown	unknown	gnl\|CDD\|380386
CP025776.1\|AUP77087.1\|4863253_4863454_+\|sulfur-carrier-protein-ThiS	unknown	unknown	gnl\|CDD\|181210
CP025776.1\|AUP77081.1\|4812287_4812698_-\|phosphate-starvation-inducible-protein-PsiE	unknown	unknown	gnl\|CDD\|235075
CP025776.1\|AUP77085.1\|4835147_4836392_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236539
CP025776.1\|AUP77079.1\|4802827_4803694_-\|4-hydroxybenzoate-octaprenyltransferase	unknown	unknown	gnl\|CDD\|237229
CP025776.1\|AUP77077.1\|4784076_4784430_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225197
CP025776.1\|AUP77080.1\|4804239_4804419_+\|hypothetical-protein	unknown	unknown	unknown
CP025776.1\|AUP77090.1\|4867733_4868051_+\|PTS-lactose/cellobiose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|376749
CP025776.1\|AUP77086.1\|4836492_4836684_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP025776.1\|AUP77181.1\|4880657_4880858_-\|hypothetical-protein	gnl\|CDD\|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	6.81777e-30
CP025776.1\|AUP77088.1\|4864750_4865383_+\|hypothetical-protein	gnl\|CDD\|236425	PRK09240, thiH, 2-iminoacetate synthase ThiH.	4.44607e-124
CP025776.1\|AUP77075.1\|4780362_4780680_-\|hypothetical-protein	gnl\|CDD\|236362	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional.	0.00171327
CP025776.1\|AUP77083.1\|4825504_4825735_+\|hypothetical-protein	gnl\|CDD\|369148	pfam06956, RtcR, Regulator of RNA terminal phosphate cyclase. RtcR is a sigma54-dependent enhancer binding protein that activates transcription of the rtcBA operon. The product of the rtcA gene is an RNA 3'-terminal phosphate cyclase. This domain is found at the N-terminus of the RtcR sequence. RtcR, and other sigma54-dependent activators, contain pfam00158 in the central region of the protein sequence.	3.59279e-18
CP025776.1\|AUP77089.1\|4867456_4867729_+\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99906	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include chitobiose/lichenan, ascorbate, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	2.84625e-35
CP025776.1\|AUP77076.1\|4780681_4780984_-\|hypothetical-protein	gnl\|CDD\|236362	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional.	1.5626e-44
CP025776.1\|AUP77085.1\|4835147_4836392_-\|hypothetical-protein	gnl\|CDD\|236539	PRK09490, metH, B12-dependent methionine synthase; Provisional.	0
CP025776.1\|AUP77084.1\|4834517_4835141_-\|hypothetical-protein	gnl\|CDD\|236539	PRK09490, metH, B12-dependent methionine synthase; Provisional.	1.82366e-136
CP025776.1\|AUP77180.1\|4759536_4759875_-\|cupin	gnl\|CDD\|380386	cd06981, cupin_reut_a1446, Cupriavidus pinatubonensis reut_a1446 and related proteins, cupin domain. This family includes bacterial and some eukaryotic proteins homologous to reut_a1446, a Cupriavidus pinatubonensis protein of unknown function that may be related to mannose-6-phosphate isomerase. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.30273e-50
CP025776.1\|AUP77087.1\|4863253_4863454_+\|sulfur-carrier-protein-ThiS	gnl\|CDD\|181210	PRK08053, PRK08053, sulfur carrier protein ThiS; Provisional.	2.97542e-30
CP025776.1\|AUP77081.1\|4812287_4812698_-\|phosphate-starvation-inducible-protein-PsiE	gnl\|CDD\|235075	PRK02833, PRK02833, phosphate-starvation-inducible protein PsiE; Provisional.	1.75802e-54
CP025776.1\|AUP77078.1\|4794347_4794980_+\|hydrolase	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	3.05757e-71
CP025776.1\|AUP77079.1\|4802827_4803694_-\|4-hydroxybenzoate-octaprenyltransferase	gnl\|CDD\|237229	PRK12848, ubiA, 4-hydroxybenzoate octaprenyltransferase.	1.29636e-176
CP025776.1\|AUP77077.1\|4784076_4784430_-\|hypothetical-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	8.16684e-47
CP025776.1\|AUP77090.1\|4867733_4868051_+\|PTS-lactose/cellobiose-transporter-subunit-IIA	gnl\|CDD\|376749	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The lactose/cellobiose-specific family are one of four structurally and functionally distinct group IIA PTS system enzymes. This family of proteins normally function as a homotrimer, stabilized by a centrally located metal ion. Separation into subunits is thought to occur after phosphorylation.	1.30189e-33

>CP025776.1|AUP77082.1|4819728_4819914_-|hypothetical-protein
MRIFHLAFAISKMTYVVLLSGYFAPGFAPCSPLVTQKPSQFSLPGATIDRSHNSQIRRVLL
>CP025776.1|AUP77081.1|4812287_4812698_-|phosphate-starvation-inducible-protein-PsiE
MTSLTRPRAEFISTILQTVLNLGLLSLGLILIVFLGKETLHLADVLFAPVQTSKYELVEGLVVYFLYFEFIALIVKYFQSGFHFPLRYFIYIGITAIVRLIIVDHQSPMDVLIYSAAILLLVITLWLCNSKRLKRE
>CP025776.1|AUP77080.1|4804239_4804419_+|hypothetical-protein
MYRRTGVTGGESSFGFHQRNRCATARAAARKKGASGDAPVAANISIVGETFTPCLLHCR
>CP025776.1|AUP77079.1|4802827_4803694_-|4-hydroxybenzoate-octaprenyltransferase
MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVPPLWILLVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRLPSGAVTENEARTLFVVLVLLAFALVLTLNMMTILLSVAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSCWIMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGRFDTLIIGILQVAVMALMASIGWLNGLSWVYYATVLIAGGLFVYQQVLIAGRERDACFKAFMNNNYVGLVLFLGLAFSYLH
>CP025776.1|AUP77078.1|4794347_4794980_+|hydrolase
MTTPYVRLDKNNAAVLLVDHQTGLLSLVRDIDPDKFKNNVLALGDLAKYFKLPTILTTSFETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSALEEGFEVFVVTDASGTFNDITRHSAWDRMSQAGAQLMTWFGIACELHRDWRNDIEGLGNLFSNHIPDYRNLMTSFNTLEQQITA
>CP025776.1|AUP77077.1|4784076_4784430_-|hypothetical-protein
MTISELLQYCMAKAGAEQSVHSDWKATQIKVADVLFAMVKEVEGRPAASLKTSPELAELLREQHQDVRPSHHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQAMERVPEQVRHQLSV
>CP025776.1|AUP77076.1|4780681_4780984_-|hypothetical-protein
MASRGVNKVILVGNLGRGPGSTLYAEWWRSCQHYAGYFRTRRDKQTGETKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQSGQGKIHH
>CP025776.1|AUP77075.1|4780362_4780680_-|hypothetical-protein
MVVNVGGTMQMLGGRRAAAHRQAAASSRAVGASLSNRRAATSSAAARSPVRNSSLLRHRLTNRRWTLTTTSRSDFCSSEQKTPQCGVFCDSEAEHYFDTSAPKYF
>CP025776.1|AUP77074.1|4763593_4763827_-|hypothetical-protein
MIETLLNKLQNGPTILTLSQILCAMKSLRTIAEDEIIKKDRFLAILDILVESYADSGIFEVDDSNKFLLDDFNAPVD
>CP025776.1|AUP77180.1|4759536_4759875_-|cupin
MLTNLLQHFPAAARAGEEETFDDLLVRPDVKIERIISTGQASPPDFWYCQPQGEWVLIIQGAAGLQLEGETEERMLQVGDFVNIPARCRHRVNWTQAEPPTIWLAIHYERAG
>CP025776.1|AUP77083.1|4825504_4825735_+|hypothetical-protein
MKRRVVIGVLGTVLDKRGKRQNRFRKWRPTVGLCQQPVSRSTGLNCCINRGIKGWRNRRRTTLRSSPPIPAFAHMR
>CP025776.1|AUP77084.1|4834517_4835141_-|hypothetical-protein
MTKWAGADTRERKIEICRRAYQILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQDFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAGQLAIYDDLPAELRDGVEDVILNRRDDATERMLELAEKYRGSKAADDGANAQQAEWRSWDVKKRLEYSLVKGITEFIEAGYRRSPPAGGAPD
>CP025776.1|AUP77085.1|4835147_4836392_-|hypothetical-protein
MTPTLRRALTSSKPIPSIQRPSPWRITRWNPCRRRSTLPRPNWPAPASDKWTAQTPDKPRYVAGVLGPTNRTASISPDVNDPAFRNISFDQLVTAYRESTKALVEGGSDLILIETVFDTLNAKAAIFAVKEEFDALGIDLPIMISGTITDASGRTLSGQTTEAFYNSLRHADALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMATQIREWAEAGFLNIVGGCCGTTPEHIAAMSRVVAGLPPRKLPDVPVACRLAGLEPLNIGDDSLFVNVGERTNVTGSAKFKRLIKEEKYSEALDVARQQVESGAQIIDINMDEGMLDAEAAMVRFLNLIAGEPDIARVPIMIDSSKWEVIEKGLKCIQGKGIVNSISMKEGVEPFIHHASWFAATARRLW
>CP025776.1|AUP77086.1|4836492_4836684_-|hypothetical-protein
MLTRRRFSGLLLYASMSCWPFGLIERCREHVSSKVEQLETAIKRKNSGSGWGHGHHDPELPFE
>CP025776.1|AUP77087.1|4863253_4863454_+|sulfur-carrier-protein-ThiS
MQIRFNDEPIRCTAGLSIAALLNQLDQLKPGVALALNEQILPRERWEDHLVQDGDRILLFPGYCRG
>CP025776.1|AUP77088.1|4864750_4865383_+|hypothetical-protein
MASWSIRRPTTKACTRNIICGGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDSWRVDCYMVAEHLLWLQQHYWQSRYSISFPRLRPCAGGIEPASIMDERQLVQTICAFRLLAPDVELSLSTRESPHFRDHVIPLAINNVSAFSKTQPKGGYADDHPELEQFSPHDGRRPQEVASALMARGLQPVWKDWDSWLGRAPQKNSNGLIMN
>CP025776.1|AUP77089.1|4867456_4867729_+|PTS-sugar-transporter-subunit-IIB
MSTSMLVQRMKDAAQKKGVDVSIKAVPVAEFKDEIATADIVLLGPQVKYEQAKLQAQAEPLGKKVAVIDMMDYGMMKGDVVLEKALKLLE
>CP025776.1|AUP77090.1|4867733_4868051_+|PTS-lactose/cellobiose-transporter-subunit-IIA
MEDLETIIMELLVNAGAARSQALTALQQARKGDFDGAEQAMEESREFVKAAHKIQTQLIGLDEGTGKLPVNLITVHSQDHLMNAMVIQDLAGDMIELYRRLPPRD
>CP025776.1|AUP77091.1|4868088_4868670_+|hypothetical-protein
MLLPEVVTCFTRQFMAQHSINSVSQPVQVFYARRAVSFYTFSILVILLLKVCLQRAPGYRSAAIFISGCALLVFMSALRWQFDAVILRQLQSIVAIALPPLAWRCFARLTTQSRPQKFPRYLIAPPDRAAAQPRRPNDDGRHTDAAVHWLRRRVDQNRATRGRCLYLHPLTGCRARLINDIYCWLLSLFFRPD
>CP025776.1|AUP77181.1|4880657_4880858_-|hypothetical-protein
MLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTRTRTLKLLKQLAQSW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage