CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP025931	Porphyromonas gingivalis strain TDC 60 chromosome, complete genome	7 crisprs	Csx28,PD-DExK,DEDDh,cas3,cas2,cas1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas4,cas7b,cas8b4,cas5,cas6	7	5	3	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP025931_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025931_1

6623-6770

Orphan

Consensus_repeat	Method
GAACCAAGGACCCTCTGATTAACAGTCAGATGCTCTAACCAACTGAGCTAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025931_1

>merge|CP025931|1|6623-6770|CRISPRCasFinder
GAACCAAGGACCCTCTGATTAACAGTCAGATGCTCTAACCAACTGAGCTAAGGAAGAATAGAAAAACGGCTTATGAGAGCGCTTTCTCTTGGGCTCGAACCAAGGACCCTCTGATTAACAGTCAGATGCTCTAACCGACTGAGCTAAG

>CP025931|1|1|6623-6770|CRISPRCasFinder
GAACCAAGGACCCTCTGATTAACAGTCAGATGCTCTAACCAACTGAGCTAAG	GAAGAATAGAAAAACGGCTTATGAGAGCGCTTTCTCTTGGGCTC
GAACCAAGGACCCTCTGATTAACAGTCAGATGCTCTAACCGACTGAGCTAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP025931.1\|AUR47604.1\|5095_6475_-\|multidrug-export-protein	unknown	unknown	gnl\|CDD\|240548
CP025931.1\|AUR48353.1\|3107_3815_+\|NAD-dependent-deacylase	unknown	unknown	gnl\|CDD\|234777
CP025931.1\|AUR48373.1\|20564_21260_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
CP025931.1\|AUR47964.1\|13179_14208_+\|cobalamin-biosynthesis	unknown	unknown	gnl\|CDD\|273466
CP025931.1\|AUR47633.1\|15532_16882_+\|two-component-system-response-regulator	unknown	unknown	gnl\|CDD\|225114
CP025931.1\|AUR47973.1\|2008_3028_-\|O-acetyltransferase-membrane-protein	unknown	unknown	gnl\|CDD\|225813
CP025931.1\|AUR48009.1\|21254_22256_-\|tRNA-dihydrouridine-synthase-B	unknown	unknown	gnl\|CDD\|239200
CP025931.1\|AUR47263.1\|7401_9981_+\|ATP-dependent-Clp-protease	unknown	unknown	gnl\|CDD\|223616
CP025931.1\|AUR48266.1\|14217_14988_+\|2-phosphosulfolactate-phosphatase	unknown	unknown	gnl\|CDD\|377205
CP025931.1\|AUR47225.1\|10120_13132_+\|beta-glucosidase	unknown	unknown	gnl\|CDD\|224389
CP025931.1\|AUR47644.1\|16892_18230_+\|two-component-system-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|227333
CP025931.1\|AUR47453.1\|22252_23929_-\|high-affinity-sulfate-transporter	unknown	unknown	gnl\|CDD\|183265
CP025931.1\|AUR47315.1\|18233_20480_+\|hypothetical-protein	unknown	unknown	unknown
CP025931.1\|AUR48545.1\|1434_2007_+\|N-acetylglucosamine-1-phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|100048
CP025931.1\|AUR47828.1\|3888_5043_-\|3'5'-cyclic-adenosine-monophosphate-phosphodiesterase	unknown	unknown	gnl\|CDD\|277331
CP025931.1\|AUR47570.1\|0_1422_+\|chromosomal-replication-initiator-protein	unknown	unknown	gnl\|CDD\|273037

Protein	Function_ID	Function_description	E-value
CP025931.1\|AUR47604.1\|5095_6475_-\|multidrug-export-protein	gnl\|CDD\|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	2.49528e-131
CP025931.1\|AUR48353.1\|3107_3815_+\|NAD-dependent-deacylase	gnl\|CDD\|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	6.40551e-107
CP025931.1\|AUR48373.1\|20564_21260_+\|transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	1.09974e-11
CP025931.1\|AUR47964.1\|13179_14208_+\|cobalamin-biosynthesis	gnl\|CDD\|273466	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see pfamAM:pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin].	2.20574e-68
CP025931.1\|AUR47633.1\|15532_16882_+\|two-component-system-response-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	1.78173e-166
CP025931.1\|AUR47973.1\|2008_3028_-\|O-acetyltransferase-membrane-protein	gnl\|CDD\|225813	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only].	1.91054e-19
CP025931.1\|AUR47263.1\|7401_9981_+\|ATP-dependent-Clp-protease	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	0
CP025931.1\|AUR48266.1\|14217_14988_+\|2-phosphosulfolactate-phosphatase	gnl\|CDD\|377205	pfam04029, 2-ph_phosp, 2-phosphosulpholactate phosphatase. Thought to catalyze 2-phosphosulpholactate = sulpholactate + phosphate. Probable magnesium cofactor. Involved in the second step of coenzyme M biosynthesis. Inhibited by vanadate in Methanococcus jannaschii. Also known as the ComB family.	6.72157e-81
CP025931.1\|AUR47225.1\|10120_13132_+\|beta-glucosidase	gnl\|CDD\|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	5.14836e-77
CP025931.1\|AUR47644.1\|16892_18230_+\|two-component-system-sensor-histidine-kinase	gnl\|CDD\|227333	COG5000, NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms].	3.06869e-32
CP025931.1\|AUR47453.1\|22252_23929_-\|high-affinity-sulfate-transporter	gnl\|CDD\|183265	PRK11660, PRK11660, putative transporter; Provisional.	1.39148e-161
CP025931.1\|AUR48009.1\|21254_22256_-\|tRNA-dihydrouridine-synthase-B	gnl\|CDD\|239200	cd02801, DUS_like_FMN, Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also in some archaea. Most dihydrouridines are found in the D loop of t-RNAs. The role of dihydrouridine in tRNA is currently unknown, but may increase conformational flexibility of the tRNA. It is likely that different family members have different substrate specificities, which may overlap. 1VHN, a putative flavin oxidoreductase, has high sequence similarity to DUS. The enzymatic mechanism of 1VHN is not known at the present.	1.24319e-109
CP025931.1\|AUR48545.1\|1434_2007_+\|N-acetylglucosamine-1-phosphate-acetyltransferase	gnl\|CDD\|100048	cd03358, LbH_WxcM_N_like, WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain. WcxM is thought to be bifunctional, catalyzing both the isomerization and transacetylation reactions of keto-hexoses. It contains an N-terminal LbH domain responsible for the transacetylation function and a C-terminal isomerase domain. The LbH domain contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), typical of enzymes with acyltransferase activity.	2.87631e-63
CP025931.1\|AUR47828.1\|3888_5043_-\|3'5'-cyclic-adenosine-monophosphate-phosphodiesterase	gnl\|CDD\|277331	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.48097e-50
CP025931.1\|AUR47570.1\|0_1422_+\|chromosomal-replication-initiator-protein	gnl\|CDD\|273037	TIGR00362, DnaA, chromosomal replication initiator protein DnaA. DnaA is involved in DNA biosynthesis; initiation of chromosome replication and can also be transcription regulator. The C-terminal of the family hits the pfam bacterial DnaA (bac_dnaA) domain family. For a review, see Kaguni (2006). [DNA metabolism, DNA replication, recombination, and repair].	0

>CP025931.1|AUR47604.1|5095_6475_-|multidrug-export-protein
MSSQQIQALESEKIPKLLFHYALPAVVGTAVNSLYNIVDRIFIGNGVSEYALSGLAITFPILIFLMAFGMLVGAGASVRVSILLGRKDIKEAEHTLANAIFLTFFTQALTIIPCYIFMEPLLRLFGASERTLPYAMEYLQYVVPANIFSALSFGFNAIMRASGYPRKAMITMIIGAMTNVVLDYIFIYPLGMGISGAAIATVISMIVCSVYVLSHFFRKDSIVRFHRSAFRLSLPVISGITAIGVAPFAMHLTGSLVNIIMNRSFVSYGETADATDLAIGAFGIINGYAMLFFMIIIGVAQGMQPIVGFNYGAKNPGRVKSAYRYSCGVNLLVSFLGFALAMLMPRTIVSLFTNSEQMIELSASALRTALIGLSLVGFQVTTTQFFQSIGFSHKAIFLSLTRQIIFLIPCLLIIPRFMGLDGVWWSLPISDLASVVLSFVLITIQMKHFNQSKKTTFAE
>CP025931.1|AUR47828.1|3888_5043_-|3'5'-cyclic-adenosine-monophosphate-phosphodiesterase
MKVFLEAFLLQYLLTLYIAYRGGQALPQKSLWRKGFHLLMGVVFTLYLIGFAGNRVLPDAVMSCIMSVTGFWFVMSIYAMFAMVIVEIARVVDKRFLHRFDRLSERVQARIRLGLFVLIGLSSALLVIHGLNIVRYPVVKHMDIRLDRPAIDGRQSMKVALLTDIHISETVTAGHIREMVERTLAERPDIVLIGGDMIDYHGRYARRDSITEYMRRLQDETPMGAYYVLGNHEYRADEVEKREWFRSIGHLVIDQVVTPGNAFYLIGRDDSTNVFRAPLHKLMPHVDTTKASILLDHQPHKLDSVAMTGVDLALYGHTHNGQIWPFTILTQLAFEKSWGYLRKGHTQFYVSSGVGAAGPAIRVFTESEIVILNVRFASENKPVH
>CP025931.1|AUR48353.1|3107_3815_+|NAD-dependent-deacylase
MNKKRLVVLSGAGMSAESGISTFRDANGLWENYPVEDVASIDGFRRNPALVLKFYNARRRDYAGCKPNAGHIGLAEMEKEYDVRIITQNVDDLHERAGSTRVIHLHGELMKNRSVATDSVLYPVDPTNPDLHVGDLAPDGCQLRPFIVWFGEAVPMIEPAIEEVTQADILVVIGTSLNVYPAAGLLNYAPRNCPIYLIDPKPVRSTSRQDIRYIHAPATEGVRMLRQELRDIIDC
>CP025931.1|AUR47973.1|2008_3028_-|O-acetyltransferase-membrane-protein
MTTKGRNTTVDVLRVLAGLMVIGIHTSGEYVLEGVAEGANFIAGLCWETVVQPAVPIFVIISGAFVLGRNETWGDFYRKRIPRLLVLLAFWLPFYWLWLWLKGDDIGSYLAGFWQGRSFVHLWYVVMLLGLYAVVPLLNEIIRRCEADGEKAARKRLWTLSTILLLLGILSNTYDYILGYNRFFPFLWPDYLGYFLVGYTLKCHAPQRSLPALSLYGLSTISLFFASRYAFEHGEGLYFYRNLSPLIVLSAISLFALFVSWGGCGGKLARIGKMQGDILGIYLVHIAVLNVVTKILVLTTPSLMQCAWLNIPIRVGLVFFVSWGVVRLMKRLPICRYLV
>CP025931.1|AUR48545.1|1434_2007_+|N-acetylglucosamine-1-phosphate-acetyltransferase
MIHPTAIVEDGCVLGQGTRVWHFSHLMCGAEVGENCNIGQNVVIMPEVRLGRGCKVQNNVSLYSGVVCEDYVFLGPSCVFTNVINPRAFIERKSEYRPTHLHEGVSIGANATILCGITIGAYAMVGAGTVVIRDVPPYALVVGNPARRIGWVSRAGHRLSFDDKGMAVCPETGERYREVEETGTIEPVSD
>CP025931.1|AUR47570.1|0_1422_+|chromosomal-replication-initiator-protein
MNYHSTNVNEIWDACLRILQDIVDERAYRTWFLPIIPVSIEGDTLTLQVPSQFFCEFLEGNFVEQLRTVLGRVIGPNASLQYNALVDNSSPKYPGTVTLAGCADGGQAAEQFDVNLLHRHMLNAATHSEAQDFDTQLNSRLNFRNFYQSECNYVARSVAEAIAASPGNTPMNPFFIYGASGVGKTHLCHALGLRVREMHPRLKVLYVSSHLFEMQFTTAARMGTINDFIVFYQQVDVLIIDDIQWLIGKKKTQLAFFQVFNHLYMLGKQIVLTSDKPPVDLNGMEERLVTRMAGATCVKIERPDLKLRREILQQRTLQSGVRLDESVLNFIAENVCDNVRELEGTLVSLITNSVVVGKEIDLTFAKRIVRQAVRLEKKEVTIECIQQAVSRVFQVQIEQMKSKSRKQDIVQARQVVMFLSKKHTAQSLSAIGELMGGRNHATVLHGCRCVTNEMEMNASFRSSVERAEQLIAN
>CP025931.1|AUR47263.1|7401_9981_+|ATP-dependent-Clp-protease
MAYDFTQTFRNSLEYSYQEATRLGVVAVTQDMLVLGIIRDGDNGAIDIMRHYGINLYELKRLIELEAIAESLPASPEGSPIFTPSAREAINDATDICADMEDEAVSPVHLLLSILNSTQESLVQKIFMKQGIKYDTILSDYFGQRNPSEGKSPSEMEILDGYQDNDFDDEEDESSPPSGNGGAGRGSGDAPEQNTGGGDTTTTTRSGGDTPALDTFGTDITAMAAAGKLDPVVGREQEIERVIQILSRRKKNNPVLIGEPGVGKSAIVEGLAERIVNRKVSRILFDKRIISLDLAQMVAGTKYRGQFEERLKAVLDELKKNPQIIFFIDEIHTIVGAGSAAGSMDTANMLKPALARGQIQCIGATTLDEYRKNIEKDGALERRFQKVPIAPSTAEETLTILQNIKEKYEDYHGVRYTDEAIKAAVELTDRYVSDRFFPDKAIDAMDEAGASVHITNVVAPKEIEILEAELTSVRENKLSAVKAQNYELAASFRDQERRTQQQIAEEKKKWEDQMSKHRETVDENVVAHVVALMTGVPAERLSTGEGERLRTMADDLKTKVVGQDTAIEKMVRAIQRNRLGLRNEKKPIGSFLFLGPTGVGKTYLAKKLAEYLFEDENAMIRVDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTERVRRKPYSVVLLDEIEKAHADVFNLLLQVMDEGQLTDSLGRRVNFKNTVIIITSNVGTRQLKDFGQGIGFHSEKDEEANKEHSRSVIQKALNKTFSPEFLNRLDDIILFDQLGKTEIRRMVDIELKSVLARIHRAGYDLVLTDEAKDVIATKGYDLQYGARPLKRTLQNEVEDRLTDLILSGQIEKGQTLTLSARDGEIIVQEQA
>CP025931.1|AUR47225.1|10120_13132_+|beta-glucosidase
MKRFLFSAITILSLSVLYTATAPARTNMGAMHAQQSKDYPFLLFGGVDSKDVKRWVDDRMKAMSTEEKVGQLLMPIVYPSLQEEKVKQAEQLVRTCHIGGILFQKGTLSEQYTMTRRLQEAAGTPLLIALDGEWGLHMRLKDAPRFPRNMGLGHQKDNQLLYNYGREVARQCRLMGIHINFAPVLDVNNNPKNPVIGTRSFGDNPRRVAERGIAYAQGLEDGGVMAVAKHFPGHGNTTEDSHKTLPTVFASREELENTELFPFKEFFRAGLSGVMTAHLNVPALEAKKNTPSSLSHAICTDLLRQEMGFKGLIFTDGLAMQGVQTAGSQPISVRAILAGNDILLGPVDPVKTFSEVLAAVEDRTISKELLDEKCRKILAFKYALIICKGVSKEVPAEEVVRQVNSREAERMSEDLWRASITILKNKKQFLPLSEENRIACVNLDGAASNTFTQELGLTSKDCYSYAKGSNSTRTQELLSKLKGYDAVIVTVRHTQPDWAGTFLHRLTEQNHTAIVFFTSPYVADRIPVAMDKARAIVVAYENVKEAARMAAYKIRDRVVVSSGGGIPVVQEEEDTDPTANMMPPTELSSGLIPMPAVDRIAKEALRQGAFPGCRILAVHRDKVVYDKSFGTLDGSARGGKVSSSTIYDLASVTKVVATTPAVMLLVQDGKLKLSDRLGTLLPRFARTDLKDITVQQLLLHEAGLRPSINFYESLIDSSSLDGKLLSPRRSSGWVRVDTNMWGNPFFGFRSDLVSGQFRPDYPFRFSSNLYLSKEVKEIVLNTIASTPRNGVGRYKYSDLGFILLQQIVEKVSGKSLNVFVEERIFRPIGAGSLGYLPLDKYSVSRIAPAQNDKFLRKSIVRGTVDDEAAACLGGISGNAGVFGTAEDVARVLDMFIHEGTYKGHRIIDQKIFRQFITTHGKGNRRCLGFDKGRASMAESASGSTYGHTGFTGTCVWVDPESELIFVFLSNRTYPNRLNKTLMTASIRPRLHQAIYEALGIAEQ
>CP025931.1|AUR47964.1|13179_14208_+|cobalamin-biosynthesis
MIFGHGDEGITPLSSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFRGSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTPWAVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVHPSGTTFFLLRLKKGTAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQRPAQNQLFIKALETFLEKY
>CP025931.1|AUR48266.1|14217_14988_+|2-phosphosulfolactate-phosphatase
MLQISLCPSPVLYPYYKTEQEEYTVVIVDIFRAGTTITTALMNGAVGIIPIATVEEAEIYAGNGFLVGGERGTKRLPFAHFGNAPEEYTRQAVEGKQLVLSTTNGTRAVDIAAGALHVIIGAFINLEAVARYCIAKQKPVMVLASGWQNRMSTEDCLFAGALAATIVRLGEEVICEDGASVFQELWGNYNTHEKLTAYLNGRDHYERLRANKLERSVPYCTSLNLTEIVPEMTFKISAASTDCPANRLFLPVTPPF
>CP025931.1|AUR47633.1|15532_16882_+|two-component-system-response-regulator
MKKSGNIIVVDDNKHVLTALKLLLTGSFETVTLLPSPKTLLSTIVEVHPDVLLLDMNFSTGINTGNEGLYWLDQVRSRFPDLPVVLFTAYADIRLAVEALKRGASDFVVKPWNNAELLESLRMAMNKAASTQVTATPKEDDSVFLGKSKAMCEVLELADRIGDTAAHVLITGENGTGKGVLAEYIHARSPRSRQPMLTVDMGALSETLFESELFGHVKGAFTDAKSDRAGKFETASGGTIFMDEIGNLSLALQAKLLAVLQQKVVTRVGSNTPIPVDVRIISATNSDLPLSVAEGRFREDLLYRLNTIHIEMPPLRRRREDIVPMAVFFLHRYARQYGKEVPELTPEAEALLSDYPWPGNVRELQHCIEKAVILSRSSSLSAADLSLPKSVDAHPTATGVASTPQTLDEMEKTAIKQALARNGSNLSNVARELGISRQTLYNKMKRYGL
>CP025931.1|AUR47644.1|16892_18230_+|two-component-system-sensor-histidine-kinase
MGRRKTGSFGLHLLFTIVMAVVGTWSAAAGHYAITVFAAGLVIFSALRLRLLYRRHLQDLSLLLNAIENGDYSVRFSEMGGNVSHRTFNRTLNRIKEILSRSRDEAIAGEQFLVHVLEQIPVGIMMVAPEGYVYSTNTVLLRLLGLPVITHLDQLRRVSPDMPRLFRSAATDSGIHIKLTTEREEQEVSLRFSSFRIREKIYHIYTLSNIGKELDARETESWIRLIRVMTHEIMNSIAPITSICDTLLDNLQSSADEEMLSTGLDTIRSTGVGLLSFVQDYRKFTAVPPPEKEDIALYAFLSGILRLQEELLSSNDIKVDIEEIPVELTVPADRRQLTSVLTNLVKNAAEAEYPADTEKRLLRIRAEERLDSLDEHRLLFHVENNGTPIPQEVFDNMFVPFYTTKTGGSGIGLSLSRYIIRLHGGNLLARRTADGFTSFVIELPL
>CP025931.1|AUR47315.1|18233_20480_+|hypothetical-protein
MRKPIVRFLLSFFWLLGVCASHMVGQSLPSVSKEIRELSNRTEQQTSLFDRKESEAFALETVRMISDRTPFLFRLAEGRSWEADVRGRSWASRVLPIVHRLKHGGIPWEQYLSSDSLCMEARLYGKYDSVTGAYKRGVVSFRSDIPQRNKVDDLTALALLGENVYAEEFDFGNRQIFPNPIRREAEAFYTYRLDSLYEKDGITYRRIAFRGLSGLNRGTVTIDATHGQLAILEMRVMMKGVITESYRVELGEVEPGLFLPIGLSVVIDRNRLWASLHNGYSASISYTGEQLDKTVLFVYMPTDSSRYRLPDELPVASVWAVRSSFGREDSSTYWKNVVVGRDHTLHQHVPWHRALAWGHKYRIGERWRLGNEGLVWALFYYNYADHLWLGQSLTAIYDMAPGIRWEIKPGLYYVTKRRKAVWTLDSKLYYSPPQRGLLQLSAGHRSFDLYSTRERIDQLTDLMMELLNGQGPTTRYDDKFVRLTNSIDLLPKLNVETSVMLAERNPLPHGETWSLFGGSITDILNISNADPDLPRIVPHHRLLEVRAKMTFNPRPYYRYTADGFLIREGEGIRAPLLSLSYRGAFGMGRKSDARFHHLDLSIQQRLVFSPAASLFYQLNVGGYFDRSVIYPSEYFFLKGGNAFWRFGDSMEAAFQTLPPYTATADKHLILQTSYRASRLLVNFLPFVFLKTNDEALHFKARWNMVSRKPYLEMGYSESIGTLMQVGVFYGGYNFFYERGVAIRFTFNM
>CP025931.1|AUR48373.1|20564_21260_+|transcriptional-regulator
MKYKKLLFDLIDYLDAFESLHDGGSHEPEIKDFADFLSWRCGKKKKQEEEVVSVTRERAAGAKNIARGVSLLHRYSRFYIKKALTKSPLQTEDEYTYLVSLMNGESMTKTELNNLNAMEKTSGAEVMRRLLKANLIEQRPDEEDRRSMRVSITPEGRKVLVNLFPNLRLCAETLVSALSDEQLTAFDHLLWLLCECHNEMFTGKHDAELTDLHAETCGLKQSAGGALSKRL
>CP025931.1|AUR48009.1|21254_22256_-|tRNA-dihydrouridine-synthase-B
MKIGAIDLGVEPLLLAPMEDVTDVAFRIMCKQFGADLVYSEFLSADALIRQVAGTFRKMAIDESERPMAVQIYGRDVASMVEAARLCESAGPDLIDLNFGCPVKRVAGKGAGSGMLRNIPLMIEITREVVKAVKLPVTVKTRLGWDNDSKIIVDLAEQLQDCGIAALTIHGRTRAQMYTGTADWTLIGEVKNNPRMQIPIIGNGDVTTPQEARRAFDVYGVDAVMVGRASIGQPWIFEDMKHFLRTGETLPSRPFSYYMDILRRQTLNNIRKLDERRGILHTRRHIAASPIFKGIPNFKPMRVAMLRATTQEELFALMDEVEKMIGSADSAAL
>CP025931.1|AUR47453.1|22252_23929_-|high-affinity-sulfate-transporter
MIGSYFRPKLLDVFSGYNRERFMADLMAGVIVGIVALPLAIAFGIASGVSPETGLITAIIGGFIVSLLGGSSVQIGGPTGAFIVIVYGIIHKYGIEGLTIATIIAGILLLVMGVLRLGTLIKFIPYPIVVGFTAGIALTIFSTQMNDLFGLGITDMPGDFLGKWGAYFTNFKSVNLWAFGMGLLSIVIIMLSPRFTKKIPGSLIAIILMTVAAYLLRLQGIGEFETIGDRFTISAQLPKPTGVTLSLETIRQLFPPAFTIALLGAIESLLSASVADGVIGEKHNSNTELIAQGAANIVVPFFGGIPVTGAIARTMTNINNGGRSPIAGIIHAFVLLLILLFLGPLTAYIPMACLAGVLIIVSYNMSGWRSVANIGRGPRSDSLVMLVTFLLTVILDLTVAIEIGLLLAILLFMKRVTENTRITVATGRLDLTQTGEIAHHDEVLDIPKGVEVYEIEGPFFFGIANRFEEIMNTLGDHPDVRIIRMRHVPFMDSTGMHNLENLIKMSRKEGVSIVLSGVRKDVHEELATAGIVELLGEENVCADIQAALRQAQAIAQGA

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Crispr_ID: CP025931_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025931_2

114674-114907

TypeVI-B2,TypeVI-B1

VI-B2

Consensus_repeat	Method
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	PILER-CR
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	CRISPRCasFinder
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	CRT

3 spacers

Csx28,cas13b

The CRISPR arrays of CP025931_2

>merge|CP025931|2|114674-114907|PILER-CR,CRISPRCasFinder,CRT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAACGATGTGGCTGTAGATGCACTCTTCCGCAAAGTTGGATCTACCCTCTATTCGAAGGGTACACACAACGAAGTGGCCAATGTTCGATAGGCTGCTCAGGTTGGATCTACCCTCTATTCGAAGGGTACACACAACACTGCCATATTATATAAGTGTGATTATTTTGTTGGATCTACCCTCTATTCGAAGGGTACACACAAC

>CP025931|2|1|114674-114907|PILER-CR
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	GATGTGGCTGTAGATGCACTCTTCCGCAAA
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	GAAGTGGCCAATGTTCGATAGGCTGCTCAG
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	ACTGCCATATTATATAAGTGTGATTATTTT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC

>CP025931|2|2|114674-114907|CRISPRCasFinder
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	GATGTGGCTGTAGATGCACTCTTCCGCAAA
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	GAAGTGGCCAATGTTCGATAGGCTGCTCAG
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	ACTGCCATATTATATAAGTGTGATTATTTT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC

>CP025931|2|1|114674-114907|CRT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	GATGTGGCTGTAGATGCACTCTTCCGCAAA
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	GAAGTGGCCAATGTTCGATAGGCTGCTCAG
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	ACTGCCATATTATATAAGTGTGATTATTTT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025931.1\|AUR47784.1\|115725_116925_-\|L-methionine-gamma-lyase	unknown	unknown	gnl\|CDD\|168478
CP025931.1\|AUR47382.1\|104643_106620_+\|transcription-termination-factor	unknown	unknown	gnl\|CDD\|236490
CP025931.1\|AUR48101.1\|106847_107756_+\|drug/metabolite-transporter	unknown	unknown	gnl\|CDD\|273359
CP025931.1\|AUR47212.1\|110554_113914_+\|hypothetical-protein	cas13b	cas13b_CAS_V-B1	gnl\|CDD\|380475
CP025931.1\|AUR48113.1\|108778_109681_-\|tRNA-dimethylallyltransferase	unknown	unknown	gnl\|CDD\|234626
CP025931.1\|AUR47552.1\|123900_125358_-\|internalin-J	unknown	unknown	gnl\|CDD\|380191
CP025931.1\|AUR48552.1\|109697_110267_-\|hypothetical-protein	unknown	unknown	unknown
CP025931.1\|AUR48513.1\|118559_119153_-\|hypothetical-protein	unknown	unknown	unknown
CP025931.1\|AUR47546.1\|117087_118557_-\|3'5'-cyclic-adenosine-monophosphate-phosphodiesterase	unknown	unknown	gnl\|CDD\|277318
CP025931.1\|AUR48294.1\|123053_123806_+\|sugar-phosphatase	unknown	unknown	gnl\|CDD\|223710
CP025931.1\|AUR48587.1\|113918_114464_+\|hypothetical-protein	Csx28	-	unknown
CP025931.1\|AUR47345.1\|120939_123036_+\|ATP-dependent-DNA-helicase	unknown	unknown	gnl\|CDD\|236794
CP025931.1\|AUR48112.1\|101478_102381_-\|glutamate-formimidoyltransferase	unknown	unknown	gnl\|CDD\|226169
CP025931.1\|AUR48621.1\|103449_103968_-\|Nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|273496
CP025931.1\|AUR47485.1\|125784_127365_+\|sialidase	unknown	unknown	gnl\|CDD\|271234
CP025931.1\|AUR47965.1\|119868_120897_+\|UDP-glucose-4-epimerase	unknown	unknown	gnl\|CDD\|187558
CP025931.1\|AUR48890.1\|125371_125632_+\|inner-membrane-protein-unknown-function	unknown	unknown	unknown
CP025931.1\|AUR48017.1\|102421_103417_-\|lipoprotein	unknown	unknown	unknown
CP025931.1\|AUR48486.1\|119253_119859_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770
CP025931.1\|AUR48046.1\|107766_108726_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133030

Protein	Function_ID	Function_description	E-value
CP025931.1\|AUR47784.1\|115725_116925_-\|L-methionine-gamma-lyase	gnl\|CDD\|168478	PRK06234, PRK06234, methionine gamma-lyase; Provisional.	0
CP025931.1\|AUR47382.1\|104643_106620_+\|transcription-termination-factor	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
CP025931.1\|AUR48101.1\|106847_107756_+\|drug/metabolite-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.48889e-12
CP025931.1\|AUR47212.1\|110554_113914_+\|hypothetical-protein	gnl\|CDD\|380475	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins. CRISPR-Cas (clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins) adaptive immune systems defend microbes against foreign nucleic acids via RNA-guided endonucleases. These systems are divided into two classes: class 1 systems utilize multiple Cas proteins and CRISPR RNA (crRNA) to form an effector complex while class 2 systems employ a large, single effector with crRNA to mediate interference. Class 2 type VI CRISPR-Cas13 systems use a single enzyme to target RNA using a programmable crRNA guide and are divided into four subtypes based on the identity of the Cas13 protein (Cas13a-d). The Cas13 proteins are capable of both pre-crRNA processing and target RNA cleavage, which protect the host from phage attacks. Once bound to a target RNA, their non-specific RNase activity is activated. Cas13b has many distinctive features compared to the other Cas13 proteins, including the lack of significant sequence similarity, disparate crRNA repeat region, and double-sided protospacer flanking sequence (PFS)-dependent target RNA cleavage.	0
CP025931.1\|AUR48113.1\|108778_109681_-\|tRNA-dimethylallyltransferase	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	1.69251e-125
CP025931.1\|AUR47552.1\|123900_125358_-\|internalin-J	gnl\|CDD\|380191	NF033187, internalin_J, class 1 internalin InlJ. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin J (InlJ).	1.77428e-35
CP025931.1\|AUR47345.1\|120939_123036_+\|ATP-dependent-DNA-helicase	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
CP025931.1\|AUR48294.1\|123053_123806_+\|sugar-phosphatase	gnl\|CDD\|223710	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only].	7.94418e-38
CP025931.1\|AUR48112.1\|101478_102381_-\|glutamate-formimidoyltransferase	gnl\|CDD\|226169	COG3643, COG3643, Glutamate formiminotransferase [Amino acid transport and metabolism].	1.54603e-150
CP025931.1\|AUR48621.1\|103449_103968_-\|Nucleoid-associated-protein	gnl\|CDD\|273496	TIGR01201, HU_rel, DNA-binding protein, histone-like, putative. This model describes a set of proteins related to but longer than DNA-binding protein HU. Its distinctive domain architecture compared to HU and related histone-like DNA-binding proteins justifies the designation as superfamily. Members include, so far, one from Bacteroides fragilis, a gut bacterium, and ten from Porphyromonas gingivalis, an oral anaerobe. [DNA metabolism, Chromosome-associated proteins].	1.34591e-52
CP025931.1\|AUR47485.1\|125784_127365_+\|sialidase	gnl\|CDD\|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	1.81978e-93
CP025931.1\|AUR47965.1\|119868_120897_+\|UDP-glucose-4-epimerase	gnl\|CDD\|187558	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
CP025931.1\|AUR48046.1\|107766_108726_-\|glycosyltransferase	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	4.31474e-97
CP025931.1\|AUR48486.1\|119253_119859_+\|GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	2.70082e-98
CP025931.1\|AUR47546.1\|117087_118557_-\|3'5'-cyclic-adenosine-monophosphate-phosphodiesterase	gnl\|CDD\|277318	cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.20368e-14

>CP025931.1|AUR48587.1|113918_114464_+|hypothetical-protein
MMTMTICWTPICVQLIKLSGIFIAAYLAYRYAVRKLSLESIENIERCKYQAVLEAHRSFYKLLRFTTDTENADSILVWQKAKGGGAKTYYFRPACIRGFLSELTDEFYKNGNGIFLSKEIISRIFEYRSIVYGLLLSERQNSDERIVMNKPETAERMISIHQELTQTVREAIALKKRTLNF
>CP025931.1|AUR47212.1|110554_113914_+|hypothetical-protein
MTEQNEKPYNGTYYTLEDKHFWAAFFNLARHNAYITLAHIDRQLAYSKADITNDEDILFFKGQWKNLDNDLERKARLRSLILKHFSFLEGAAYGKKLFESQSSGNKSSKNKELTKKEKEELQANALSLDNLKSILFDFLQKLKDFRNYYSHYRHPESSELPLFDGNMLQRLYNVFDVSVQRVKRDHEHNDKVDPHRHFNHLVRKGKKDRYGNNDNPFFKHHFVDREGTVTEAGLLFFVSLFLEKRDAIWMQKKIRGFKGGTETYQQMTNEVFCRSRISLPKLKLESLRTDDWMLLDMLNELVRCPKSLYDRLREEDRARFRVPVDILSDEEDTDGAEEDPFKNTLVRHQDRFPYFALRYFDLKKVFTSLRFQIDLGTYHFAIYKKNIGEQPEDRHLTRNLYGFGRIQDFAEEHRPEEWKRLVRDLDYFETGDKPYITQTTPHYHIEKGKIGLRFVPEGQHLWPSPEVGATRTGRSKYAQDKRFTAEAFLSAHELMPMMFYYFLLREKYSEEASAERVQGRIKRVIEDVYAVYDAFARDEINTRDELDACLADKGIRRGHLPRQMIGILSQEHKDMEEKIRKKLQEMMADTDHRLDMLDRQTDRKIRIGRKNAGLPKSGVIADWLVRDMMRFQPVAKDTSGKPLNNSKANSTEYRMLQRALALFGGEKERLTPYFRQMNLTGGNNPHPFLHETRWESHTNILSFYRSYLKARKAFLQSIGRSDRVENHRFLLLKEPKTDRQTLVAGWKGEFHLPRGIFTEAVRDCLIEMGLDEVGSYKEVGFMAKAVPLYFERACKDWVQPFYNYPFNVGNSLKPKKGRFLSKEKRAEEWESGKERFRLAKLKKEILEAKEHPYLDFKSWQKFERELRLVKNQDIITWMICGDLMEENKVEGLDTGTLYLKDIRTDVQEQGSLNVLNRVKPMRLPVVVYRADSRGHVHKEQAPLATVYIEERDTKLLKQGNFKSFVKDRRLNGLFSFVDTGALAMEQYPISKLRVEYELAKYQTARVCAFEQTLELEESLLTRCPHLPDKNFRKMLESWSDPLLDKWPDLHRKVRLLIAVRNAFSHNQYPMYDEAVFSSIRKYDPSFPDAIEERMGLNIAHRLSEEVKQAKETVERIIQA
>CP025931.1|AUR48552.1|109697_110267_-|hypothetical-protein
MVFNFLIVSDEVEDFRREIAIDSEATFLDLQNAILDSVGYSHSELTSFFLCDEDWHKGQEITLMEMDTASDEDSYVMENTRLEEFIEDEHQRLVFEFDLMTERYFFIEVMDIVPGKSLSEPKLLTSEGLPPQQSSLDDLMDPTAIPTKQARGLDLEEDFFGDSEYNEDEIDREGFEGFDEITSDLSDNY
>CP025931.1|AUR48113.1|108778_109681_-|tRNA-dimethylallyltransferase
METQDHTLYVLLGPTGVGKTDLSLDIAERLGSPIISADSRQIFRELPIGTAAPTPEQRARVPHLFVGTHSVRDYYSAGMYEVEVLEALKELFRKYRGVLLTGGSMMYIDAVCRGIDDIPDPFPEVREELYARYGAEGLDGILAQLRLLDPDYYAKVDRRNYKRVIHGLEICLSTGRPFSSFHRHEAKERPFRIVKIGLYREREELCKRIDARVLEMMEQGLEEEARAVYPLRHLNALNTVGYKEMFEYFDGSIDQAEAVRRIQRNSRVYARKQMTWFRHDSTIRWFHPEADKGTVLTLVT
>CP025931.1|AUR48046.1|107766_108726_-|glycosyltransferase
MDVNTTYTKELSIIVPIYNEERELPELVRRLSAAAASITEDYELIFVNDGSRDGSLELLRSLCKGDDRFFYINLSRNFGHQIAVSAGLDHVRGKATVIIDGDLQDPPELIPELYAKYREGYEVVYAQRKHREGETWFKKATAKGFYRTMRKITSIDMPLDTGDFRLIDRKIVQCLREMPEQNKFLRGQIAWMGFRQTGVQFDRDERKYGQTNYPLRKMLALAIDGITGFSSRPLEWVAQLGAWVSLLSLFVIVYALISHFLLDKTVSGWTSVIVSSMFLGGVQLICLGVIGTYISKINKNIVARPLYLVAESNIAADER
>CP025931.1|AUR48101.1|106847_107756_+|drug/metabolite-transporter
MTSSRLYGLAVGILSSATFGLIPLFTLPISAKGASFELILFYRFFFAAIAIGILHRLSGGSFKVSRADIGPLVLLGFLYAGTALFLFHGYGYMASGVATTIHFLYPLFVTALMLLFFGERLSPVPLTAIFIALIGVGLLMGLTGGGDRVGLTGFVIVAISALCYALYIVFVNRSRIRIMPGRRLTFYVFVAAAGFCLINVLVRQGEVAPLPDAASWGNILLLALVPTVISNLALVVAVRNIGSTLTSALGAMEPLTSVLVGVWVFDEVLGASAIVGMGCILIAVGLIVFSEPLELMLRRRRR
>CP025931.1|AUR47382.1|104643_106620_+|transcription-termination-factor
MQKYTIVDLNEKAEAELAAIAGELGIANAGSMPKQELIYKILDEQAISVAGVRKEKQKTTEDRHTERRKPGRPRKNAEEEAPESKDVAAAPAEPNEEEAQAKRKRGRPRKAAEEIAEETREDVQQLVALAAAEETNATEKESAGRKPAAKTSTASPAKAPAKALPRPAETTPRVAPSPPSTTPVSEPAKDDAKPETPAPPPAIESITTTPAAGAVDEGGARRLVFRHKNSSSVLDQVLPYSSPQPPQRPKPAGAPVGSSPIRQRQAAGVPTPRREPQQSLYNFDGILECMGVLEIMPDGYGFLRSSDYNYLSSPDDVYVSQQQIKHNGLKTGDVVAGTIRPPREGEKYFPFVQLRSVNGRSPEEIRDRVPFDHLTPLFPEEKFTLEAPGIRAVNDKISVRVVDLFAPIGKGQRGLIVSQPKTGKTMLLKDIANAIAANHPEVYMIVLLIDERPEEVTDMARSVNAEVIASTFDEPAERHVKIAEIVLNKAKRMVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALQKPKRFFGAARNIENGGSLTILATALTDTGSKMDEVIFEEFKGTGNMELQLDRRLSNKRIFPAVDIMSSSTRRDDLLQDETTLNRMWILRKYLSDMNPVEAMEFVRKQLENTHTNMEFLASMSN
>CP025931.1|AUR48621.1|103449_103968_-|Nucleoid-associated-protein
MSLKYVIKKSVAKIGPKAGQTIYYAQPAAQDSVTFHSLCKRIAEESALTSADVKGILDRLVNILSEELPNGKTVRIGELGSFRLSFGSKQLDDPKNFSVDQIQKHRLVFIPSAELKSIPARGKLRPGSSALAFDYERVEPQPKKKPGTGDNQTPSPSTPGGGGGQGGTGGGL
>CP025931.1|AUR48017.1|102421_103417_-|lipoprotein
MFRISRLGIVLLVSLIACNLSKAQNTTKDLINLSIKYLEQNDSTAFRKTYQDIFMQYVTEALCAPFDKAIQDRDQTYIQARLDSLTSDPEEDAFTYHLLSKPEYQAFYYTLPRWEVYKSWIDSVERNPHADMRNEIWQIQREDQGIRILWLRLPNETGDNIRKKVRDEILLVDRQNTERAIHIIDTFGEWPGANRLGCSADQTLWLCIQHADQRPEVATRYLPMLQKAVEEKRTDPMHYAYLVDRIRMHECKEQIYGTQTYHVKEENGNKFFFVIPIEDIDHVDERRAGIGMDPLSDYVNSMGYDWDIRQYKKDLPKIWKYYRHSCKKKKN
>CP025931.1|AUR48112.1|101478_102381_-|glutamate-formimidoyltransferase
MALSRIMECVPNFSEGRDREKIEKIVNPFRTREGVKLLNYSNDEDHNRLVVTVVGEPEPLREAVLEAVGIAVELIDLTKHTGQHPRMGAVDVIPFIPIKNVTAEDADALAKEVGRTIGEKYGVPVFLYEKSATAPHRENLAKIRKGEFEGMAEKIHEADWHPDFGPADRHPTAGTVAVGARMPLVAYNVNLNTNDLSIADAIAKKVRFLGGGLRFCKAMGVELTDRGIVQVSMNLTDFTKTAVYRAHEMVRMEAARYGVSVVGSEVIGLVPMQALIDCAEYYLGIENFSMDQILESRIME
>CP025931.1|AUR47784.1|115725_116925_-|L-methionine-gamma-lyase
MKKEDLMRSGFATRAIHGGAIENAFGCLATPIYQTSTFVFDTAEQGGRRFAGEEDGYIYTRLGNPNCTQVEEKLAMLEGGEAAASASSGIGAISSAIWVCVKAGDHIVAGKTLYGCTFAFLTHGLSRYGVEVTLVDTRHPEEVEAAIRPNTKLVYLETPANPNMYLTDIKAVCDIAHKHEGVRVMVDNTYCTPYICRPLELGADIVVHSATKYLNGHGDVIAGFVVGKEDYIKEVKLVGVKDLTGANMSPFDAYLISRGMKTLQIRMEQHCRNAQTVAEFLEKHPAVEAVYFPGLPSFPQYELAKKQMALPGAMIAFEVKGGCEAGKKLMNSLHLCSLAVSLGDTETLIQHPASMTHSPYTPEERAASDISEGLVRLSVGLENVEDIIADLKHGLDSLI
>CP025931.1|AUR47546.1|117087_118557_-|3'5'-cyclic-adenosine-monophosphate-phosphodiesterase
MRKKRSNPYYKVSRRKFSKRNSGRRYSRKRRRNGRRWGLMISLLLLVALGIWIAKRYRAWFVSPAEVAYTVPHTIDRLTLTPGEDFLTQRTVSWRCDTLPQDSWLDYRSPDGADADTLLISLPAEGKEVLTRAGRNYYYHAKINGLKPGRTYTYRVKTGEQTSPWYRFSIPDSSAATDFIYIGDVQDPGNGGSQALLQQLRTLHPNPDFLALGGDQIEGPTDFYWEVWHRVIGDWTASTPVIAATGNHEYIKGLKRQLDPRWVPQYNYPANGPKGFERRSYYIDFPHMRLIVMDTNDIQWPASVFNHRTWLKNALETTVQPWKVVMFHHGVYSVRQGRMNPIIRYGFRSILEEGGADLVLQGHDHAYSRITTKTESGTKTTPVYIISSASPKHYRNGFSEQHDRIGSGLYLFQTIHVTQGEIRYRSTTFDNRPYDDLHLKKQGGRTTVKDNAEDWKEIFAFDNFADSKKGRKKRADYRQAAKERAAGHR
>CP025931.1|AUR48513.1|118559_119153_-|hypothetical-protein
MNKSLIILIYTLVWVLLIVLQSLALESANPGTPSFWNTPSAYYSVWIVDAYIIALYYINYFLIAPFMIKRHLFRPYIVLSLALGGIGMLLPVVFHHAWQWTIPGTSEGQMPLYGEGFIASIAAIAVGLSVRGVREWVRLARRNTNLEIALKNKSIAYDRAEARLRSLEQPVSFHNPGTGAKAENAPSSTPVSPQTNE
>CP025931.1|AUR48486.1|119253_119859_+|GTP-binding-protein
MEIKKAAFVISNTDVRKCPDTRLPEYAFIGRSNVGKSSLINMLTGQKGLAMTSQKPGKTQLINHFIIDDSWYLVDLPGYGYARLGASNRESLRRIIETYILCREQLSSLFVLIDCRHEPQKIDLEFLQWLGENGIPFGIVFTKADKLSFSRLKENTEAYKQKLLETWEELPPVFITSSEKKTGKEELLDYIDSINQELATK
>CP025931.1|AUR47965.1|119868_120897_+|UDP-glucose-4-epimerase
MKQKILVTGGTGYIGSHTTVELQQAGYRVVSVDNFSNSNAAVLDGIARITGVRPDFYEADCNDTEAMERVFTAHPDIAGVIHFAASKAVGESVQKPLLYYRNNILSLLNILELMERFGTRGIVFSSSCTVYGQPEVLPVTEEAPIQEALSPYGNTKQINEEIIRDAIHAGAGYKAILLRYFNPIGAHPTAHIGELPNGVPQNLIPYLTQTAAGIRAELSVFGDDYDTPDGSCIRDYIYVVDLAKAHVAAIERMLNEEKASDSLEVFNIGTGRGVSVLELIRTFERVTGVVVPHRIVGRREGDIEQVWAEPKKANEVLGWKALESLEDTLLSAWRWQQRLSVK
>CP025931.1|AUR47345.1|120939_123036_+|ATP-dependent-DNA-helicase
MDILSTKITYLTGVGPKRAEVLKEEIEVRTYLDLLHYFPFRYVDRSRFYAIREIRSDMPYIQLRGVLRNFSEVGEGRRKRLTATFSDGTGSIELVWFKGIKYIRDKLQEGRRYIVFGKPVFFASGYNIAHPEIDAEEKAEQVAGGLTPIYHTTERMKSMGLGSKQLQQLLYVLLNQVSATLTETLPPYILSSYGFVSYQEAIRQIHFPQGVAQLEAARTRLKFEELFYVQLHLIGSKLERKARFQGIVFAQVGALFNTFYKEHLPFELTGAQKRVVREIRQDTLSGHQMNRLVQGDVGSGKTLVALLAMLLALDNGCQACLMAPTEILARQHHHTLSELLRPLGIEVGLLIGSCTARQRERLLPRLADGSLSIVVGTHALLEQGVAFRRLGMAVIDEQHRFGVQQRARLWEKNLDTLPHILIMSATPIPRTLAMTLYGDLDISIIDELPPGRKPIQTLHHFDSDMAPVFRFLRSQLAAGRQVYVVYPMIEGSETTDLKNLEDGFELFSSIFPDEGVTMVHGKMKAKEKEARMADFVSGRSRILLATTVIEVGVNVPNATVMVVENADRFGLSQLHQLRGRVGRGGEQSYCILITGTKTGEDSRRRIQVMVETNDGFEIAEEDMRLRGFGDLEGTRQSGRQISLRIANPARDTELIALSRSIAEQLLERDPELRHPDNQMLALRLNKLFPKEEDWSVIS
>CP025931.1|AUR48294.1|123053_123806_+|sugar-phosphatase
MDYNNITEALQAFRTEKAYRHAPLRSCFFDMDGVLFDSMPAHARSWVEAAGECGIAAEPLDFYRWEGQKGSDTIKILFERGYGRLPTEKEIADMYGRKSQLFALYNSGSVIDDAPALVSDVCDRGLRIMLVTGSSQTDILQRLQRSYGDNFSPANMVTGADVHRGKPHPEPYLKALECVGMSPSEAFVVENAPLGVRAAVDAGIFTIAVNTGCLPDADLWDAGASLVLPSMAVLRSLLGELLTASLSSSA
>CP025931.1|AUR47552.1|123900_125358_-|internalin-J
MKRKPLFSALVILSGFFGSVHPASAQKVPAPVDGERIIMELSEADVECTIKIEAEDGYANDIWADLNGNGKYDSGERLDSGEFRDVEFRQTKAIVYGKMAKFLFRGSSAGDYGATFIDISNCTGLTAFDCFANLLTELDLSKANGLTFVNCGKNQLTKLDLPANADIETLNCSKNKITSLNLSTYTKLKELYVGDNGLTALDLSANTLLEELVYSNNEVTTINLSANTNLKSLYCINNKMTGLDVAANKELKILHCNNNQLTALNLSANTKLTTLSFFNNELTNIDLSGNTALEWLFCNGNKLTKLDVSANANLIALQCSNNQLTALDLSKTPKLTTLNCYSNRIKDTAMRALIESLPTITEGEGRFVPYNDDEEGGEEENVCTTEHVEMAKAKNWKVLTSWGEPFPGITALISIEGESEYSVYAQDGILYLSGMEQGLPVQVYTVGGSMMYSSVASGSAMEIQLPRGAAYVVRIGSHAIKTAMP
>CP025931.1|AUR48890.1|125371_125632_+|inner-membrane-protein-unknown-function
MVCKKWLVFVLISCFQNLIANSAGGFVAAIIRGWKKKACLPFSFRRRATKESGWICFGLCAFLWIAPLFELRQYRGIILALGKANI
>CP025931.1|AUR47485.1|125784_127365_+|sialidase
MANNTLLAKTRRSVCLVVFCCLVAMLHLTAQEVTMWGDSHGVAPNQMYRTLVKVALSESLPPDAKQIRIGFSLPKETEEKVTALYLLVSDSLAVRDLPDYKGRVSYDSFPISKEDRTTALSADSVAGRRFFYLAADIGPVASFSRSDTLTARVEELAVDGRPLPLKELSPASRRLYREYEALFVPGDGGSRNYRIPAILKTANGTLIAMADRRKYNQTDLPEDIDIVMRRSTDGGKSWSDPRIIVQGEGRNHGFGDVALVQTQAGKLLMIFVGGVGLWQSTPDRPQRTYISGSRDEGLTWSPPRDITHFIFGKDCADPGRSRWLASFCASGQGLVLPSGRIMFVAAIRESGQEYVLNNYVLYSDDEGDTWQLSDCAYRRGDEAKLSLMPDGRVLMSIRNQGRQESRQRFFALSSDDGLTWERAKQFEGIHDPGCNGAMLQVKRNGRDQVLHSLPLGPDGRRDGAVYLFDHTSGRWSAPVVVNSGSSAYSDMTLLADGTIGYFVEEDDEISLVFIRFVLDDLFDARQ

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Crispr_ID: CP025931_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025931_3

471563-471670

Orphan

Consensus_repeat	Method
GAAGCGATTTCGGCGAAAAAATTCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025931_3

>merge|CP025931|3|471563-471670|CRISPRCasFinder
GAAGCGATTTCGGCGAAAAAATTCCTTGCTGCAGCTTGCAGGAAGCTACTTTGGCGAAAAAATTCCTATTTGCAGCTTGCAAGAAGCGATTTCGGCAAAAAAATTCCT

>CP025931|3|3|471563-471670|CRISPRCasFinder
GAAGCGATTTCGGCGAAAAAATTCCT	TGCTGCAGCTTGCAGGAAGCTACTTTGGCGAAAAAATTCCTATTTGCAGCTTGCAA
GAAGCGATTTCGGCAAAAAAATTCCT

Protein	Signature genes	Signature genes Name	Protein_function
CP025931.1\|AUR47293.1\|472013_474365_+\|macrolide-export-ATP-binding/permease	unknown	unknown	gnl\|CDD\|274576
CP025931.1\|AUR47922.1\|461031_462102_+\|hemin-transport-system-permease-protein	unknown	unknown	gnl\|CDD\|376439
CP025931.1\|AUR47740.1\|470110_471364_+\|efflux-pump-periplasmic-linker	unknown	unknown	gnl\|CDD\|273776
CP025931.1\|AUR47291.1\|474397_476767_+\|cell-division-FtsX-related-transmembrane-transport-protein	unknown	unknown	gnl\|CDD\|274576
CP025931.1\|AUR48509.1\|463297_463891_-\|indolepyruvate-oxidoreductase-subunit-IorB	unknown	unknown	gnl\|CDD\|180732
CP025931.1\|AUR47847.1\|459895_461035_+\|ABC-type-Fe3--hydroxamate-transport-system-periplasmic-component	unknown	unknown	gnl\|CDD\|238561
CP025931.1\|AUR47865.1\|483791_484907_-\|succinate-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|341482
CP025931.1\|AUR47476.1\|463917_465525_-\|indolepyruvate-oxidoreductase-subunit-IorA	unknown	unknown	gnl\|CDD\|274526
CP025931.1\|AUR48284.1\|462145_462904_+\|ferric-enterobactin-transport-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
CP025931.1\|AUR47790.1\|466791_467985_+\|carboxynorspermidine-synthase	unknown	unknown	gnl\|CDD\|224662
CP025931.1\|AUR48624.1\|468021_468534_+\|nicotinamidase	unknown	unknown	gnl\|CDD\|238493
CP025931.1\|AUR48414.1\|479261_479921_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
CP025931.1\|AUR48283.1\|465602_466364_-\|NADP-dependent-3-hydroxy-acid-dehydrogenase-YdfG	unknown	unknown	gnl\|CDD\|187604
CP025931.1\|AUR47550.1\|486615_488076_-\|4-hydroxybutyryl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|225243
CP025931.1\|AUR47496.1\|480203_481757_-\|hemerythrin-HHE-cation-binding-domain-protein	unknown	unknown	gnl\|CDD\|225301
CP025931.1\|AUR47653.1\|468736_470071_+\|outer-membrane-protein-TolC-Type-I-secretion-system	unknown	unknown	gnl\|CDD\|224455
CP025931.1\|AUR47290.1\|476793_479169_+\|cell-division-FtsX-related-transmembrane-transport-protein	unknown	unknown	gnl\|CDD\|274576
CP025931.1\|AUR47693.1\|484957_486253_-\|succinyl-CoA:coenzyme-A-transferase	unknown	unknown	gnl\|CDD\|223504
CP025931.1\|AUR48871.1\|486258_486543_-\|Fe/S-biogenesis-protein	unknown	unknown	gnl\|CDD\|376458
CP025931.1\|AUR47624.1\|482240_483596_-\|succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143440

Protein	Function_ID	Function_description	E-value
CP025931.1\|AUR47293.1\|472013_474365_+\|macrolide-export-ATP-binding/permease	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	3.07712e-20
CP025931.1\|AUR47922.1\|461031_462102_+\|hemin-transport-system-permease-protein	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	1.20854e-67
CP025931.1\|AUR47740.1\|470110_471364_+\|efflux-pump-periplasmic-linker	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	3.45071e-33
CP025931.1\|AUR47291.1\|474397_476767_+\|cell-division-FtsX-related-transmembrane-transport-protein	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	4.81462e-32
CP025931.1\|AUR48509.1\|463297_463891_-\|indolepyruvate-oxidoreductase-subunit-IorB	gnl\|CDD\|180732	PRK06853, PRK06853, indolepyruvate oxidoreductase subunit beta; Reviewed.	4.90894e-83
CP025931.1\|AUR47847.1\|459895_461035_+\|ABC-type-Fe3--hydroxamate-transport-system-periplasmic-component	gnl\|CDD\|238561	cd01141, TroA_d, Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	9.37424e-24
CP025931.1\|AUR47865.1\|483791_484907_-\|succinate-semialdehyde-reductase	gnl\|CDD\|341482	cd14860, 4HBD_NAD, 4-hydroxybutyrate dehydrogenase, also called gamma-hydroxybutyrate dehydrogenase, catalyzes the reduction of succinic simialdehyde to 4-hydroxybutyrate in the succinic degradation pathway. 4-hydroxybutyrate dehydrogenase (4HBD) is an iron-containing (type III) NAD-dependent alcohol dehydrogenase. It plays a role in the succinate metabolism biochemical pathway. It catalyzes the reduction of succinic simialdehide to 4-hydroxybutyrate in the succinate degradation pathway This succinate degradation pathway is present in some bacteria which can use succinate as sole carbon source.	0
CP025931.1\|AUR47476.1\|463917_465525_-\|indolepyruvate-oxidoreductase-subunit-IorA	gnl\|CDD\|274526	TIGR03336, IOR_alpha, indolepyruvate ferredoxin oxidoreductase, alpha subunit. Indolepyruvate ferredoxin oxidoreductase (IOR) is an alpha 2/beta 2 tetramer related to ketoacid oxidoreductases for pyruvate (1.2.7.1, POR), 2-ketoglutarate (1.2.7.3, KOR), and 2-oxoisovalerate (1.2.7.7, VOR). These multi-subunit enzymes typically are found in anaerobes and are inactiviated by oxygen. IOR in Pyrococcus acts in fermentation of all three aromatic amino acids, following removal of the amino group by transamination. In Methanococcus maripaludis, by contrast, IOR acts in the opposite direction, in pathways of amino acid biosynthesis from phenylacetate, indoleacetate, and p-hydroxyphenylacetate. In M. maripaludis and many other species, iorA and iorB are found next to an apparent phenylacetate-CoA ligase.	1.28548e-175
CP025931.1\|AUR48284.1\|462145_462904_+\|ferric-enterobactin-transport-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	2.12852e-77
CP025931.1\|AUR47790.1\|466791_467985_+\|carboxynorspermidine-synthase	gnl\|CDD\|224662	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism].	3.02098e-158
CP025931.1\|AUR48624.1\|468021_468534_+\|nicotinamidase	gnl\|CDD\|238493	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase). Nicotinamidase, a ubiquitous enzyme in prokaryotes, converts nicotinamide to nicotinic acid (niacin) and ammonia, which in turn can be recycled to make nicotinamide adenine dinucleotide (NAD). The same enzyme is also called pyrazinamidase, because in converts the tuberculosis drug pyrazinamide (PZA) into its active form pyrazinoic acid (POA).	2.64691e-32
CP025931.1\|AUR48414.1\|479261_479921_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	7.00946e-113
CP025931.1\|AUR48283.1\|465602_466364_-\|NADP-dependent-3-hydroxy-acid-dehydrogenase-YdfG	gnl\|CDD\|187604	cd05346, SDR_c5, classical (c) SDR, subgroup 5. These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.8236e-148
CP025931.1\|AUR47550.1\|486615_488076_-\|4-hydroxybutyryl-CoA-dehydratase	gnl\|CDD\|225243	COG2368, COG2368, Aromatic ring hydroxylase [Secondary metabolites biosynthesis, transport, and catabolism].	0
CP025931.1\|AUR47496.1\|480203_481757_-\|hemerythrin-HHE-cation-binding-domain-protein	gnl\|CDD\|225301	COG2461, COG2461, Uncharacterized conserved protein [Function unknown].	6.50376e-105
CP025931.1\|AUR47653.1\|468736_470071_+\|outer-membrane-protein-TolC-Type-I-secretion-system	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	2.43713e-41
CP025931.1\|AUR47290.1\|476793_479169_+\|cell-division-FtsX-related-transmembrane-transport-protein	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	6.26143e-33
CP025931.1\|AUR47693.1\|484957_486253_-\|succinyl-CoA:coenzyme-A-transferase	gnl\|CDD\|223504	COG0427, ACH1, Acetyl-CoA hydrolase [Energy production and conversion].	1.56665e-125
CP025931.1\|AUR48871.1\|486258_486543_-\|Fe/S-biogenesis-protein	gnl\|CDD\|376458	pfam01106, NifU, NifU-like domain. This is an alignment of the carboxy-terminal domain. This is the only common region between the NifU protein from nitrogen-fixing bacteria and rhodobacterial species. The biochemical function of NifU is unknown.	1.2279e-16
CP025931.1\|AUR47624.1\|482240_483596_-\|succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143440	cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.	0

>CP025931.1|AUR47740.1|470110_471364_+|efflux-pump-periplasmic-linker
MDRKIEKKKTLIPRKYYPYAGGAIVILALAAWAVFGNHSTKFRAERARISIDSVRRGEFNDYVRINGQVQPINSIQISAVEGGMVAEKTVEEGAMVHKGDIIVRLTNPMLNLNILDSEAQLAEKQNFLRNTQVTMEQDRLNLKRESLNLRLDIERKKRKAEQYARLYKEKLCSREEYLQAGEDYQYAVEGSRLVMERQRQDSLYRGIQVRQMEESLHNMRRNLEMVRARVEDLNVKAPADGQLGLLDVEIGQTVGAGSRIGQINVLSDYKVEAMIDEHYIDRVKAGLAASFERQGRDFSLRVRKVYPEVRDKQFRTDFVFDGERPDNIRTGQTYYINLRLGQPSEAIMIPRGAFYQNTGGRWIFVVTPDGKRAVRRDITIARQNPQYYEVTSGLHAGEMVITSSYDMFGDAEEIILN
>CP025931.1|AUR47653.1|468736_470071_+|outer-membrane-protein-TolC-Type-I-secretion-system
MRFQHYLICTAAVAALAANPLTGQSNMTLEECIDYARRHSSAVALSAAELEQSKADYLQAVGNFLPRVSAGTGASWNFGRGLDAETNTYTDINSFNNSYSIHATMTLFDGLQSVYRLRMAHARRESSRLSVREQQELAALGTTEAYYDLVYARQMQELAMQKYEESNRLHRQTARMEELGMKSRPDVLEMQSRMAGDRLTLTQADNQCIIALIRLKEKMNFPIDDELVLDDMPADSLSADMAESDSSAGVFARAAHHHPVLLRAKLDEQAATDRLRAARGAFLPSVSVSGGWNTGFSRFLNGSDYTPFSEQFRNRRGEYVSLNLSIPIFSGFSLVSNLRQARAERRAAIVRRGEAERRLYSEIAQAMADRDAALASYRQAKEHTDAMQTAYEAVLQRYEEGLNTAIDLTTQANRLLDARVQRLRAAMTYRLKCKLIAYYGCLSD
>CP025931.1|AUR48624.1|468021_468534_+|nicotinamidase
MVLLIVDPQVDFVSGSLAVEGAPKAMKALAEYMAAHRKEIKSIVVTMDQHPADHCSFVAQGGQWPSHCVRYTVGAAIEPCIAEALAACSAEGIPVEMIEKATTQERDAYSAFETEVPDSLRSTERIVVAGIAGDYCVRQSVLDLERHGLGERIELLKEGIAYIAEEENRP
>CP025931.1|AUR47790.1|466791_467985_+|carboxynorspermidine-synthase
MGKVLIIGAGGVGTVVAKKVAMNTDVFTEIMLASRTRSKCDKIASEIKNVRIQTAQVDADNVEELVALFESFKPELVINVALPYQDLTIMDACLRCGVNYLDTANYEPLDEAKYEYSWQWAYQDRFRKAGLTAILGCGFDPGVTSVYTAYAAKHHFDEIHYLDIVDCNGGDHHKAFATNFNPEINIREITQKGKYWENGRWIETEPQEIHKTLTYPSIGERESYLLYHEELESLVKNFPTIKRARFWMTFGQEYLTHLRVMQNIGMTRIDPIMYNGVEIVPIQFLKAVLPNPGDLGENYTGETSIGCRIRGIRDGKEHTYYIWNNCSHEVAYKETGTQGVSYTTGVPATVGAMMFMKGIWRKPGVFNVEEFDPDPFLEEVAKQGLPWHEKHDIDLEL
>CP025931.1|AUR48283.1|465602_466364_-|NADP-dependent-3-hydroxy-acid-dehydrogenase-YdfG
MNPIALITGATSGIGAASARRLASLGYNLIITGRRSERLQNIADEIRAEYPVEILPLSFDVRNREEVETHLGNLLDPWQAVSVLVNNAGLAAGLDPIQSGDIEDWERMIDTNIKGLLYVTRTISPGMIARSAGHIINIGSIAGKEVYSNGNVYCATKHAVDALSKAMRIDMLPYGIKVTQICPGAVETEFSLVRFHDDQAKADAVYKGFTPLCANDIAECIAAVLNLPDNICINDMVVMPKAQAGSGHFFKQV
>CP025931.1|AUR47476.1|463917_465525_-|indolepyruvate-oxidoreductase-subunit-IorA
MQKQLLLGVEAIAQAALDAGISGVYAYPGTPSTEITEHIQNSRMAKERNIHREWAANEKTAMESALGMSYAGKRALVCMKHVGMNVAADCFMNAAITGANGGMVIVAADDPSMHSSQNEQDSRVYGQFAMIPVMEPSNQQEAYDMTRLAFDLSERLGTPVMMRITTRLAHSRAGVVQTEPIGENELHLPEDKRQYVLLPGIAKKRYRILLDKQTDFVRESENSPYTEYVDAADKSKGIVACGIAYNYLMEAFKAQVPYPVLKVTQYPIPHKQMERLLNECGDIVIMEEGYPVVEQLLKGFPGLERIKGRLDGTLPRDGELNPDHVAKAFNIPVVEGEPIPDLVAARPPALCKGCSHRDVYDALNEVLTEYPNGRVFSDIGCYTLGALPPYEAINSCVDMGASITMAKGAADAGLFPAVSVIGDSTFTHSGITGLLDAINENSNITVIISDNESISMTGGQHSSAYGKVEAICRGIGVDPDHIKELLPVPKNHDELCSIIREEINYEGVSVIIPRRVCIQKHARDAKAAKRAKAKE
>CP025931.1|AUR48509.1|463297_463891_-|indolepyruvate-oxidoreductase-subunit-IorB
MKTDIILAGVGGQGILSIAAAIGSAALTNNLYLKQAETHGMSQRGGDVQSFLRLSDAPIYSDLIPIGGADLILSVEPMEALRYLPYLKPDGYVVTNTVPFINIPNYPETTSVISKIESLPHHVLIDADSIARDEVGNVRASNFVMLGAASPFIEIPFDYLAGGIEAIFSRKGQEVVDMNLKALNAGREFALRYAAGK
>CP025931.1|AUR48284.1|462145_462904_+|ferric-enterobactin-transport-ATP-binding-protein
MEKSIELSRLAIGYRTKSGDRIVASGLEAHLHAGQLTALLGVNGAGKSTLMRTMAGFMKPLSGQIHLLGRSLDSYKEIEIAKRIGVVLTDNCRIAGMTAGELVALGRSPYTGFWGRLQKGDRKLVAEAVERVGIAPLINRELTTLSDGERQKVVIAKALAQQTPIIFLDEPTAFLDYPSKMELLYLLHSLAHDTGRTIFLSTHDLDAILPMADRVWLLDKERPFREGTPASLASALEDYFGYTHLSPTSEPV
>CP025931.1|AUR47922.1|461031_462102_+|hemin-transport-system-permease-protein
MTSVSHLRTISIAGILAALGGAVLILFGVNLFLGSVAIPMSEIFRHLFSDRPEGGEALVHYNILWKSRLPEALTAAFAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVALVVLLSGSLGGVALSSLGYMGEVAMNIAAAVGSLAVMGLIVFVSTKVRSHVTLLIIGVMIGYVANAVIGVFKFFSIEEDIRAYVIWGLGSFSRATDSQLSFFAILMLIFIPAGMLLVKQLNLLLLGESYARNLGLNTRRARLLVISSAGLLIAAVTAYCGPIGFLGMAVPHLARVIFHTSDHRILMPATCLIGSALALFCNIIARMPGFEGALPVNSVTALVGAPIIVTVLFRRRRFKEETD
>CP025931.1|AUR47847.1|459895_461035_+|ABC-type-Fe3--hydroxamate-transport-system-periplasmic-component
MRRYSVTFFLSAILFLIGAGCNRTRTQEQKATSAISSDSLHPQYAEGFRLDAGEGCYLLSIEDPQQESHKEYRFALVPKGTYPVIPEGYTAVTIPVERVVCMTTLQLSNFIALDAQSLVAGISSTRYLRDSVMKAQLQDGRTQKIGIEGNFDREVVMSLQPDLILISPFKRGGYDVLEQVSVPLIPHLGYKELTPLGQAEWVKLIGLLTGQYDKACRFFSEIETRYHTLTGYADEVTDRPIVFSGEMRGGNWYAVGGKSYLAQQIRDAGGEYFLKDDQRSGGVSLDFETVYSRSDSARYWRILNSYPGEFGYEALKAEDSRYADFRAFKEKGVIYCNLRETAFYELMPVHPDWVLADLIAILHPGLLPDHQPHFYYLLQ
>CP025931.1|AUR47293.1|472013_474365_+|macrolide-export-ATP-binding/permease
MRTYFKFLSRNKLYTFVTIVGFALSLIFVLLLSFYVRREQQADRIHTDYKRIYQYNVESKNNWSGFICCYPAGTLIREQVPDVEEICRISEYNDKEYIFIGADKQNGLIASHLSVESNFFTFFDGYKLLEGDPKTVLSEQNSAVISSALAARIFGNMSPIGQEISFFDFSKNKQTFRITGIMEPMPDNCHIRPAELLFYQEPKENNYNNGNYALYLKAREGADLTAQLPAVQKTVQGKDVIFAFDEKAEVKLHPLEKCYPEPLFPNEYAMMVQKGNPARTRILIAITLLVLIIAIISYINLTLAQGGSRGNEVALRRLWGSSRLAIVRRLWFESLLLIFLSTLLAVFGMFALEPVFDRLFDTHLYLARHISLTLILLLIGFMLLLSIVCAALPAWFISRFRPIEVVSGKFRRVVKSSFSQIMVISQYAITMILLSCTMVMAVQIDYMTNSDMGYDYRNKLIIDVFGLDPQIVSTMRTEIAKIPGITGIGLTRGTPLNGGNNNSSEYRGRPLSMQIFSIDSVALSLFDLKMKPNGRKADKPDRTLYLSRSAYNDFDVANLPDGVIHWGKAGEFYYCGDAPEVHFGGFKEPHPSYLFIPYPQSSAWSWSVLVGYSEGADPEQLIQSIQAVYSRITGQPYTEILRSEDIIASHSEEERSLSGFLLLFSILALVGTVMSVFAMAALRIRHKQKEIAIRKVVGAREVQILQIIGRRSLWNLLIAFAVASPASYLVMNRWLQGYTYHADMPWWVFPASLLFVSAVAMLSMLSMAMNAASSNPVDYLKNE
>CP025931.1|AUR47291.1|474397_476767_+|cell-division-FtsX-related-transmembrane-transport-protein
MRTYFKFLSRNKLYTFVTVFGFSVSLMFVILLGFYVQGELSVDNFHSKGDRIYMLRSELHACLSNPAPAYVQELVPEVEAYCRIANADLYIETTDGEKIKTSILLVDSTFFTIFDFKLRTGQPDDVLSLRRSIVLTPETARRFFGNDDPKGRILHDKLTVSGIMEPIPFYSQFPQVDAVVSYDYIEELFGSELLSGWGYFQFSAYFLMKPHTNIQAKAKVLEKIFTGEESPLGLWRSGYAKEVHFVPLKKCYYDPLVITSRFDIRKNDASKVYILLAIVLLILFIAILNYINLTVAQAGFRGKEAAVRRLLGESQKGLIRRYLGESFLITFISFLLGLLLAFILEPFFDRVLDTRINLISRFTYQTIIVIVSSIVILSFASGLLPSIVISHFKPIEVVKGYFSYRIKSNYSHFLVILQYTVSLILVTCSLIILMQSHFLIHTDLGFRTHGIMLISNNLDSVPQESLRNEIQKIPGVDMVSFSSGNPVNIANNVAFNDDGERAQFTWEMMIDSLFFDFFEIKPKYITQEPREVLFNGDRFRKTHLMPSWATASMVNVVHPDPNTHEFTRGSYKQYDGLTHVMVGILPEIKYRPLNESHDPLLIYPLQRGQYPWTTMVRVRDSIDRKAVEKTILETYKRIGNVDDVKWHWAEDIILDRYKSQTNLSQLISAFALLTVLIMVMGVFAMSLYMIKQKEKEIALRKVNGATVATILAMLNIRSLRRFGIALLIALPVSWWAMDRWLQTFAFHIRLDWWVFVVAALIVLLLSLVSTSLQSWRAACANPVDYLKNE
>CP025931.1|AUR47290.1|476793_479169_+|cell-division-FtsX-related-transmembrane-transport-protein
MLPLKLAARRLFRQGEHSISKLLTLTLGLSVSVLLLSIVIYQRSYERDFPHHDRICIVKTHGTRQSQEGDKPEELDFSQVSGGVAPAIQEEIPGVELATRTTLYGTSKMILEDNKTYETKTLLAEPAFLDMFGVELIAGVRDSALRDNMTCLISESLARKMGGDVLGKRLRPAESKSDRAITIGGVFEDLPHNSSIQADMLLPITWMPAESLNNWIGNDRYIAYVRLRPGVSPESLDEALLEMQKRHQDMEVFRKAGVELHYSLTPFNRLRLEDPTLVNMLRIQQIVAIAVLLISLLNYVLMTLASMVNRRRVAAIRKCYGAMPVQIQGTMIWETFLYLFLSLVLALLTLILFRKPMEALIETPLLHLISWRVAAALAGVLAMATFFMGWIPGYSLSRTPVMNIFRKSVAHNRLWKLGLLAVEFVAASFLFGLLAITGLQYRHMIGQDAGYKAAGLYYVPIESLDQQQLPVVIEKLKALPEVEGYTLTTALPASSGQSGDNLIDPVTDRELINVADLFYVDEHYLKVYDIELLEGKNFDAATEKDREIMLSKKAATELARLMNWKDGVIGKNIILTSFGRVVIRGVYDDLMLRRQHLSPYPEKLPSAIVYGDDWLHYLTIRLRHDDARLLHRVNGILSEADPYKETSFLSVEMELLSRFEAAKTFRNTILFGSVVAILIALIGLVGYVNTEVNRRRKELAIRKINGAGEGDILRLFLRSIFRLSLPSVLAGLFVAYLFGRNWLEKFSYRIELNGRIFLLVGLFVLLIIALAVVINLRRIARRNPVNELRYE
>CP025931.1|AUR48414.1|479261_479921_+|ABC-transporter-ATP-binding-protein
MIEISNLTKVFRTEEIETVALDGVSLKVDKGEFIAIMGPSGCGKSTLLNILGLLDNPTSGIYKLDGAEVGNLREKDRTAVRKGNIGFVFQSFNLIEEMTVSENVELPLVYLGVKASERKERVEEALRKMSISHRAGHFPNQLSGGQQQRVAIARAVVANPKLILADEPTGNLDSKNGADVMELLRGLNREGATIVMVTHSEHDARSAGRIINLFDGKIR
>CP025931.1|AUR47496.1|480203_481757_-|hemerythrin-HHE-cation-binding-domain-protein
MQDIKTNETFDSLDKSKLERMLDIKEAHREGHLTLEEAKERMKKEVGSISPEEFAAAEQLFKERDQDECQNEDVRTMLQLFEGLINPIRPDLPFGHPIDAYLRENDKAKELLDQADALLERTFIPNPWIELMETLMGYKLHFARKQNQLYSTLEQKGFDRPSTTMWTYDDHIRDEMNKAMSLLREKDYDSFPAAYKEMAIVLRDLMEKEELILYPTSLKLISDKEFEAMKHGDREIGFFLIDMPELDAPAKQSKEAHGQSFMAELGALLAKHGMGTGGQDDKAILDVAEGKLTLEQINLLFRHLPVDISFVDENELVCFYTDTKHRVFPRSKGVIGREVRNCHPPKSVHIVEEIIDKFRRGEQDRAEFWINKPGVFIYIVYVAIRDADGRFRGVMEMMQDCTRIRSLEGSRTLLTWDEEQSPAQGSKESESDTVGEDGIRPDTKLKSLLQRYPRLMDDLPTISSKFTLLRSPMAKVILPVATIKMMSERADIPSDMLIGKLESLIASYNKPDRSEEK
>CP025931.1|AUR47624.1|482240_483596_-|succinate-semialdehyde-dehydrogenase
MEIKEMVSLARKAQKEYQATHNQEAVDNICRAAAKVIYENAAILAREAVDETGMGVYEHKVAKNQGKSKGVWYNLHNKKSVGILNIDERTGMIEIAKPIGVVGAVTPTTNPIVTPMSNIIFALKTCNAIIIAPHPRSKKCSAHAVRLIKEAIAPFNVPEGMVQIIEEPSIEKTQELMGAVDVVVATGGMGMVKSAYSSGKPSFGVGAGNVQVIVDSNIDFEAAAEKIITGRAFDNGIICSGEQSIIYNEADKEAVFTAFRNHGAYFCDEAEGDRARAAIFENGAIAKDVVGQSVAFIAKKANINIPEGTRILVVEARGVGAEDVICKEKMCPVMCALSYKHFEEGVEIARTNLANEGNGHTCAIHSNNQAHIILAGSELTVSRIVVNAPSATTAGGHIQNGLAVTNTLGCGSWGNNSISENFTYKHLLNISRIAPLNSSIHIPNDKEIWEL
>CP025931.1|AUR47865.1|483791_484907_-|succinate-semialdehyde-reductase
MQLFKLKSVTHHFDTFAEFAKEFCLGERDLVITNEFIYEPYMKACQLPCHFVMQEKYGQGEPSDEMMNNILADIRNIQFDRVIGIGGGTVIDISKLFVLKGLNDVLDAFDRKIPLIKEKELIIVPTTCGTGSEVTNISIAEIKSRHTKMGLADDAIVADHAIIIPELLKSLPFHFYACSAIDALIHAIESYVSPKASPYSRLFSEAAWDIILEVFKKIAEHGPEYRFEKLGEMIMASNYAGIAFGNAGVGAVHALSYPLGGNYHVPHGEANYQFFTEVFKVYQKKNPFGYIVELNWKLSKILNCQPEYVYPKLDELLGCLLSKKPLREYGMKDEEVKGFAESVLKTQQRLLANNYVELTVDEIEGIYRRLY
>CP025931.1|AUR47693.1|484957_486253_-|succinyl-CoA:coenzyme-A-transferase
MKDVLAEYASRIVSAEEAVKHIKNGERVALSHAAGVPQSCVDALVQQADLFQNVEIYHMLCLGEGKYMAPEMAPHFRHITNFVGGNSRKAVEENRADFIPVFFYEVPSMIRKDILHIDVAIVQLSMPDENGYCSFGVSCDYSKPAAESAHLVIGEINRQMPYVHGDNLIHISKLDYIVMADYPIYSLAKPKIGEVEEAIGRNCAELIEDGATLQLGIGAIPDAALLFLKDKKDLGIHTEMFSDGVVELVRSGVITGKKKTLHPGKMVATFLMGSEDVYHFIDKNPDVELYPVDYVNDPRVIAQNDNMVSINSCIEVDLMGQVVSECIGSKQFSGTGGQVDYVRGAAWSKNGKSIMAIPSTAKNGTTSRIVPIIAEGAAVTTLRNEVDYVVTEYGIAQLKGKSLRQRAEALIAIAHPDFREELTEHLRKRFG
>CP025931.1|AUR48871.1|486258_486543_-|Fe/S-biogenesis-protein
MTEEIVELVLREQISPLLRSHGGDLSLSQIKDKTVFVRFSGACRFCPAAHETVEKIVQAMIREYFKDDNIDVILENSVSDDLLEQAKNILRKPK
>CP025931.1|AUR47550.1|486615_488076_-|4-hydroxybutyryl-CoA-dehydratase
MMTSEQYVESLRKLNLKVYFMGEKIENPVDHPMIRPSMNSVAMTYKLAEMDEYKHLMTATSNLTGKQVNRFCHLHQSTEDLKDKVKMQRLMGQKTASCFQRCVGMDAFNAIYSTTYEMDQALGTTYHKRFIEYMKYVQDNDLVVDGAMTDPKGDRGLSPSEQADPDLYLHIVEVREDGIVVSGAKAHQTGAVNSHEHLIMPTIAMREADADYAVSFAVPSDAEGVIMIYGRQSCDTRKMEEGADIDLGNSEFGGHEALVVFDRVFVPNERVFMCKEYQFAGMMVERFAGYHRQSYGGCKVGVGDVLIGAAALAADYNGVPKASHIKDKLIEMIHLNETLYACGIACSSEGTQMKAGNYMIDLLLANVCKQNITRLPYEIARLAEDIAGGLMVTMPSQQDFRHPEIGPIVKKYLAGATGKSTENRMRVLRLIENITLGTAAVGYRTESMHGAGSPQAQRIMIARQGDLEGKKKLARAIAHIDESLDK

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Crispr_ID: CP025931_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025931_5

2110817-2110914

Orphan

Consensus_repeat	Method
CTTCGAATCCGTTTATATAAGGCCTAAAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025931_5

>merge|CP025931|5|2110817-2110914|CRISPRCasFinder
CTTCGAATCCGTTTATATAAGGCCTAAAATATTACTACGGGAAAGCCCAGCGAACGCATTGCCGGAATCTTCGAATCCGTTTATATAAGGCCTAAAAT

>CP025931|5|5|2110817-2110914|CRISPRCasFinder
CTTCGAATCCGTTTATATAAGGCCTAAAAT	ATTACTACGGGAAAGCCCAGCGAACGCATTGCCGGAAT
CTTCGAATCCGTTTATATAAGGCCTAAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP025931.1\|AUR48466.1\|2116058_2116682_-\|Nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|273496
CP025931.1\|AUR47713.1\|2102732_2104016_-\|malate-dehydrogenase	unknown	unknown	gnl\|CDD\|223117
CP025931.1\|AUR47314.1\|2113594_2115862_-\|putative-low-affinity-inorganic-phosphate-transporter	unknown	unknown	gnl\|CDD\|376541
CP025931.1\|AUR47823.1\|2104198_2105359_+\|transporter	unknown	unknown	gnl\|CDD\|223701
CP025931.1\|AUR48230.1\|2096732_2097539_+\|high-affinity-zinc-uptake-membrane-protein	unknown	unknown	gnl\|CDD\|334323
CP025931.1\|AUR47447.1\|2105740_2107441_+\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP025931.1\|AUR48074.1\|2108176_2109112_+\|transporter-YitT-family	unknown	unknown	gnl\|CDD\|224203
CP025931.1\|AUR47423.1\|2119068_2120865_+\|H(+)/Cl(-)-exchange-transporter	unknown	unknown	gnl\|CDD\|238233
CP025931.1\|AUR47698.1\|2110923_2112219_-\|succinyl-CoA:coenzyme-A-transferase	unknown	unknown	gnl\|CDD\|223504
CP025931.1\|AUR47586.1\|2117665_2119072_+\|undecaprenyl-phosphate-N-acetylgalactosaminyl-1-phosphate-transferase-glycosyltransferase	unknown	unknown	gnl\|CDD\|274398
CP025931.1\|AUR48143.1\|2121926_2122814_+\|Beta-barrel-assembly-enhancing-protease	unknown	unknown	gnl\|CDD\|274350
CP025931.1\|AUR48904.1\|2113132_2113372_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
CP025931.1\|AUR48431.1\|2107468_2108116_+\|inner-membrane-SNARE-like-domain-protein	unknown	unknown	gnl\|CDD\|223659
CP025931.1\|AUR47206.1\|2097525_2101014_+\|t9SS-component-TPR-domain-protein	unknown	unknown	gnl\|CDD\|369506
CP025931.1\|AUR48544.1\|2117093_2117669_+\|threonylcarbamoyl-AMP-synthase	unknown	unknown	gnl\|CDD\|376519
CP025931.1\|AUR48935.1\|2112924_2113113_-\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|177033
CP025931.1\|AUR47572.1\|2101038_2102460_+\|esterase	unknown	unknown	gnl\|CDD\|378820
CP025931.1\|AUR48722.1\|2096296_2096740_+\|hypothetical-protein	unknown	unknown	unknown
CP025931.1\|AUR47982.1\|2109115_2110135_+\|N-acetyl-alpha-D-glucosaminyl-diphospho--ditransoctacis-undecaprenol-4-epimerase	unknown	unknown	gnl\|CDD\|223528
CP025931.1\|AUR48013.1\|2120825_2121824_-\|small-conductance-mechanosensitive-channel	unknown	unknown	gnl\|CDD\|182386

Protein	Function_ID	Function_description	E-value
CP025931.1\|AUR48466.1\|2116058_2116682_-\|Nucleoid-associated-protein	gnl\|CDD\|273496	TIGR01201, HU_rel, DNA-binding protein, histone-like, putative. This model describes a set of proteins related to but longer than DNA-binding protein HU. Its distinctive domain architecture compared to HU and related histone-like DNA-binding proteins justifies the designation as superfamily. Members include, so far, one from Bacteroides fragilis, a gut bacterium, and ten from Porphyromonas gingivalis, an oral anaerobe. [DNA metabolism, Chromosome-associated proteins].	7.03433e-42
CP025931.1\|AUR47713.1\|2102732_2104016_-\|malate-dehydrogenase	gnl\|CDD\|223117	COG0039, Mdh, Malate/lactate dehydrogenases [Energy production and conversion].	3.44031e-63
CP025931.1\|AUR47314.1\|2113594_2115862_-\|putative-low-affinity-inorganic-phosphate-transporter	gnl\|CDD\|376541	pfam01384, PHO4, Phosphate transporter family. This family includes PHO-4 from Neurospora crassa which is a is a Na(+)-phosphate symporter. This family also contains the leukaemia virus receptor.	3.15944e-08
CP025931.1\|AUR47823.1\|2104198_2105359_+\|transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	6.19746e-42
CP025931.1\|AUR48230.1\|2096732_2097539_+\|high-affinity-zinc-uptake-membrane-protein	gnl\|CDD\|334323	pfam00950, ABC-3, ABC 3 transport family.	2.47787e-50
CP025931.1\|AUR47447.1\|2105740_2107441_+\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP025931.1\|AUR48074.1\|2108176_2109112_+\|transporter-YitT-family	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	5.11744e-47
CP025931.1\|AUR47698.1\|2110923_2112219_-\|succinyl-CoA:coenzyme-A-transferase	gnl\|CDD\|223504	COG0427, ACH1, Acetyl-CoA hydrolase [Energy production and conversion].	1.62269e-113
CP025931.1\|AUR47423.1\|2119068_2120865_+\|H(+)/Cl(-)-exchange-transporter	gnl\|CDD\|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	9.43748e-102
CP025931.1\|AUR48143.1\|2121926_2122814_+\|Beta-barrel-assembly-enhancing-protease	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	3.69614e-15
CP025931.1\|AUR48904.1\|2113132_2113372_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	6.96682e-31
CP025931.1\|AUR48431.1\|2107468_2108116_+\|inner-membrane-SNARE-like-domain-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	2.05569e-31
CP025931.1\|AUR47206.1\|2097525_2101014_+\|t9SS-component-TPR-domain-protein	gnl\|CDD\|369506	pfam07767, Nop53, Nop53 (60S ribosomal biogenesis). This nucleolar family of proteins are involved in 60S ribosomal biogenesis. They are specifically involved in the processing beyond the 27S stage of 25S rRNA maturation. This family contains sequences that bear similarity to the glioma tumor suppressor candidate region gene 2 protein (p60). This protein has been found to interact with herpes simplex type 1 regulatory proteins.	1.92112e-08
CP025931.1\|AUR48544.1\|2117093_2117669_+\|threonylcarbamoyl-AMP-synthase	gnl\|CDD\|376519	pfam01300, Sua5_yciO_yrdC, Telomere recombination. This domain has been shown to bind preferentially to dsRNA. The domain is found in SUA5 as well as HypF and YrdC. It has also been shown to be required for telomere recombniation in yeast.	4.65026e-52
CP025931.1\|AUR48935.1\|2112924_2113113_-\|50S-ribosomal-protein-L33	gnl\|CDD\|177033	CHL00104, rpl33, ribosomal protein L33.	1.21956e-18
CP025931.1\|AUR47572.1\|2101038_2102460_+\|esterase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	3.18902e-12
CP025931.1\|AUR47586.1\|2117665_2119072_+\|undecaprenyl-phosphate-N-acetylgalactosaminyl-1-phosphate-transferase-glycosyltransferase	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	1.55214e-129
CP025931.1\|AUR47982.1\|2109115_2110135_+\|N-acetyl-alpha-D-glucosaminyl-diphospho--ditransoctacis-undecaprenol-4-epimerase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	2.0029e-43
CP025931.1\|AUR48013.1\|2120825_2121824_-\|small-conductance-mechanosensitive-channel	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	3.6272e-60

>CP025931.1|AUR47982.1|2109115_2110135_+|N-acetyl-alpha-D-glucosaminyl-diphospho--ditransoctacis-undecaprenol-4-epimerase
MGNKRVLITGATGFIGGYLVDEALRRQYEVWAAVRPHSDRSRLTDSRIRFVEIDYRDPSDIARLADKIAPEGESAWHLVIHNAGITKARDTSLFREINAEQTKRFLIGLQGAKHCPERFVLMSSMGSYGAPPDDCQPLSSSSVPKPTTAYGESKLLAEQYVQTFVTIPYTIIQPTGVYGPHDQDYLMAIRSVDKGFDFSTGNTPQTLTFIYAEDLASAVFIAAEHPDAAGQKYIVSDGKEYTDIEFGRMIQHLLGRKNVCHLRIPLPLVKATCYIGQKWADISGTLTPLNLDKYAIIAQRNWRCDSSPIRAIGFSPRYNLEQGLAETIRWARTTGQIRR
>CP025931.1|AUR48074.1|2108176_2109112_+|transporter-YitT-family
MALTKTSKLYYKVHDYILIILGCSIYAFAWTGLILSQGITTGGLAGISTLIKIATGIPAAIPYNIINLGLAVLALIFLGWRFMVKTVISVVIMAIIIPIGEEYLVVTEIVNGVKVFTPLLLPNEPALALVIGSILSGLGIAIVFSVNSSTGGTDIIVAIMNKYKNMSFGRAILLVDCTIILCSYLVNVYIAGKSPSDAFNLLIYSAIEVILVSTVLDWYLNSNRQSVQFLIFSLKNEELSNAIQERIKRGCTLLDATGGYSGQPCKVLVVVARKTQSLSIHRIIQEIDPKAFVSESVVRGVYGEGFQAIRK
>CP025931.1|AUR48431.1|2107468_2108116_+|inner-membrane-SNARE-like-domain-protein
MGFIQWCLAHLNYWTIMFLMAIESSFIPFPSEIIVPPAAWMAATGQNGLNVFLVILFATIGAGIGAAVNYILSLLLGRPIVYAFANSKLGHLCLINEEKVRYAERYFDKNGAVSTLVGRLIPAVRQLISIPAGLARMKFLPFISYTMLGAGIWNCILAAIGYNLAKVPGIETQEQLLEKVNKYSHEIGFSIMGVVVVVLLIMFYKKKRRSARKGN
>CP025931.1|AUR47447.1|2105740_2107441_+|glutamine--tRNA-ligase
MNENKNSGIEEKKSLNFIEQIVESDLSEGKNDGRIQTRFPPEPNGYLHIGHAKAICIDFGIAQRYGGVCNLRFDDTNPVKEDVEYVDAIREDIEWLGFHWGNIYYASDYFQELYDFAERLIREGHAYVDEQTAEQIAAQKGSPTVPGTASPFRDRPAEESLDLFRRMNAGEFEEGAMTLRAKIDMASSNMHFRDPIIYRIIKHPHHRTGNEWNVYPMYDFAHGQSDYFEGVTHSICTLEFEVHRPLYNYFIELLRKDSYAPRQIEFNRLNLTYTMMSKRKLLQLVKDGLVSGWDDPRMPTLCGYRRRGYTPESIRNFIDKIGYTKYDGIIDVALLEHAVREDLNKRATRVSGVIDPIKLVITNYPEDKTEEMAAVNNPEDESAGVHTITFARELYIEKEDFMEDAPKKYFRMTPGQEVRLKSSYIVRCTGCKKDEDGSVVEVYAEYDPLTLSGMPESNRKVKGTIHWVSARHSLPAEVRLYDRLFTDENPSDIKDKTLAEMLNPDSLKVLKSCRVEPFLADAAPGSHFQFQRIGYFTVDPDSRPGALVFNRTVSLKDSWQKAQKNA
>CP025931.1|AUR47823.1|2104198_2105359_+|transporter
MQSFFDREFTFDRTARLFFIILLVGGIMAIVIGLRGILIPFCLSWILAYVLMPLVRFVQYRLHFRFRFLSVITVLVFISALIFFAILSLVPAVEEEVSKTITLLQQYRIDENLLQMLPAPIRKFLSESGSMNDLFKGISYEKLMENSKEIFGQLNKLVSGTISLFSYTTIFFIGVLYFIFILFDFEKLGKGFVNLFPVGHRIRVRSILKEVDKNMNSYFRGQALIALCVGILLSIGYKIIDFPLGVTLGLFIGMLNLIPYLQIVGLIPIVFLSVLKAAQTGQNFFVVLALGIGVMMIVQVIQDTILTPNIMGKRMGMSPAMILLSISIWGSLLGFFGLFIALPLTMSLYSVYKRYVIQDPKFIREENEETMPRKGLFRKHSRKEEK
>CP025931.1|AUR47713.1|2102732_2104016_-|malate-dehydrogenase
MLGLRSENPEKQARENFRCGARIFCFPNQNENFLEPRFADCRVADFWRVNSFNRVYRILLGNSYICLIDISGKSKKSRYPRIRFLQSFNNGTVMSYLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGLVTLIYSGLKPSQVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRTYGGHGEQMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLRGRSSFQSPSYVSIEMIRAAMGGEAFRWPAGCYVNVPGFEHIMMAMETTITKDGVKHSDINQLGNEAERAALKESYSHLAKLRDEVIAMGIIPAIADWKTVNPNL
>CP025931.1|AUR47572.1|2101038_2102460_+|esterase
MKHKIIIIIYVVVLLMTTMSCKSQKFAGDWSGRIPRGNGSLALVVHLKQTGNTWQGSMDSPDQQAFGIPLSSVTVVGDSLSIAVQDLLLSYKGKLKNDSIEGEFRQGRFGTMMSLYRGLDAAKPYRPQTPVPPFPYDVTDVKILHKTGGFTIAGTLTAPKDANKTKGTVILISGSGLQDRDETIFGHKPFAVLADQLTRHGYAVLRCDDRGFGESAGDASQATTDTLAGDIESELAYLRQHYPRLTDKVFLIGHSEGGIIAPMVARRVGGIAGLVLVGAPSVKGAEILLSQNAAMDEFATGQPQSQAKRAALEELIRQATAPGDSSDIRTRIESYCRSNASVLFPQAMTDEMKEQGIKLMTEQLSNPWMRHFLTYDPAPLLDVTSGEGSHPLPPTMAIYGGRDKQVLHEVNMSKMKSLLGIETGNTANKVVYLPEVNHIMQPAEFGTPDEYAFLNRTVDTELMEIVCSFLDSL
>CP025931.1|AUR47206.1|2097525_2101014_+|t9SS-component-TPR-domain-protein
MSMRSHRFLYLLVFYLLIPVAVVFGMLSCSTSKNTAASRFYHNFTTRYNVFYNGQNAYNDAYDRLLESHTEGYSEEIFLDPITAQSGQEKAKEGGAFDQAIVKGRKAIHLHSIRTKPERKQGWQSDPKAVAFQNKREYNRFLHNAWMLVGKSQFYNADFLQAQATFSYIARLYSNEPIIRDEARLWQVRCYSEMGWLHEGERLLERIPKDLPHVDRRGLYSLAVAERSILSGDKRAAIPYLQQAARQEKNKRQRARMYYLLGQLLQENNRPEEARKAYSKVLRASPPFALDFAARIRKMELEGERNPRTVAARLERMAKKGKYKEVLDQIFYAAGNIYMDIPDTLAATKAYTTGIEKSTARGADFALCQIRLGDIYMQRKQYLKAQPCFSAAAGVLNRLNPDYKRVAELSSQLDELVGHAKVVHEQDSLLALAAMPEEQRLAIIDSVINAYAIAEKKRLEEEEMAKLQQSQELFNAESEGFAPSPGGKTQNPPPGMQTGGASGEFYFYNPQLIAQGKAAFERKWGKRVLEDDWRRRRKQANFDIPTDDSSTTEETDETQPGTLMTEEELQAAAADSAASNPLNREYYLAQLPMTEDAKEAAGKLIAEGLLGMGAVFNERMEKFDESADTYETLLRRYPNYEKKMDVLYRLFMLYTRMNNKQEAERCRALILQYYPEDNLAKALSNPDYLKELAAMDRRQNELYEQAFDSYLKGVVGSVRKSRNECRERFPLSELAPKFDFLNALCYVLESDSKGFTSALKQLVKDYPKADVTELASSMLTELLRGRSIVQGGYTGIDWDIRWGGSDTDSISPDSLPPFVKPKSFERTRLILLAPAGTLNKNRVLFALASFNFSRYTEQTLEIVQSTVGAFDQWLMTSLPTPRMGWQYIKDAFAPNGFMSAMSESSLLFPISESNYQLLVKGKSIGQYMTFLAKEEVPETAFVLDRWQQMTGRAQAVGKEDEDIEPAGTPAPIVSDKNEAEDTARDSTSGTDRKPLVSIKPHKDSIMTATPITFDIDREQILSGAKPVAADSSAADTISDAAALPSLKQQEGKDVSVEQIQRLAKERAQNEKDEKKALEKAKREKERDRKRELKAREKEREKARRDKLKDQRLKQKEREQKLKEKERERKEKLRQRERERKARAKEREQKKKAGQNKSGGGPQ
>CP025931.1|AUR48230.1|2096732_2097539_+|high-affinity-zinc-uptake-membrane-protein
MIEALQYGFFRNAIAGSLLTAIVCGLLGSYVVARRMVFVSGGITHASFGGIGMGLYLGINPFLSAAVFAVLSALGVQGVTRAGLLREDSAIAAFWSLGMALGTLFIALTPGYSTGLSSFLFGNILLVSHTDLLLLALMALVMIAVFVFGYRTILYTAFDPDFASTRGIRVHLVEMLMSVAVAVGIVLSIRLVGIMLLMSLLTLPQSIMNLFTSRFSSILFGSVILAALAAFTGLWGSYSLGIPSGAFIILVLVALFLLAKTIKSFVHA
>CP025931.1|AUR48722.1|2096296_2096740_+|hypothetical-protein
MSNILILIIGVLVLGLVAALTEIRHSHKRRAAEAKGESLPEEPVRVVPPGCCGMHITCEKDSLLTAVSKSIVYYDDEELDRYAGVLPEEYNTEAVEEFEEILSTLQEEEVPSWIRSLQMRQIQMPVSIKEQALFIVSEHRIQHRHDD
>CP025931.1|AUR47698.1|2110923_2112219_-|succinyl-CoA:coenzyme-A-transferase
MQWQELYRQRVCSADEAVVDSLKPGTKVVFGHAAAAPVRFSQAMYRQRERLENITVFHMLYFGDAPHLAPEMRSHVHPTLNFLEGNSRPASRDRRVDFIPCHFHEVPELFRQGFFPLDVAVVQVSTPNEEGYCSFGVSCDYTKAAAECAPVVVAEVNKQMPFIGGENLIHISKLTHIIEVDEPIAEVLPPAISDLELRIGQNCASLIKDGDTLQLGIGGIPDAVLRALEGHKDLGIHTEMFTDGVMRMIRKGIINGKKKTLHPEKVVTSLIFGSKELYDFVNNNPVIECYPVDYINNPDVIGKNDRMVSINSCLEMDLMGQAASESIGYEQFSGSGGQVDFLRGAKRSKGGISIMAFPSTAKKGAESRIVPILKEGACVTTGRNEVDYVVTEYGVARLRGATLRQRAEALTAIAHPDFRPALEEEIRRRFE
>CP025931.1|AUR48935.1|2112924_2113113_-|50S-ribosomal-protein-L33
MAKKVKGNRVQVILECTEHKESGMPGISRYITTKNRKNTTQRLELKKYNPILRRMTLHKEIK
>CP025931.1|AUR48904.1|2113132_2113372_-|50S-ribosomal-protein-L28
MSKICQITGKKAMVGNNVSHSKRRTKRVFDVNLFRKKFYWVEQDCWVVLRISAAGLRLINKIGLDAAIKRAAEKGFLNA
>CP025931.1|AUR47314.1|2113594_2115862_-|putative-low-affinity-inorganic-phosphate-transporter
MSLIFTAIVVFLFILAIFDLIVGVSNDAVNFLNSAIGAKAAPFKIIVGVAALGVFCGAAMNNGMMEIARHGIFRPEHYTFSELMVVFLSVVITDVVLMDMFNSLGMPTSTTVSLIFELLGGSFFMAMTKVGGTVGFQDLLNTEKALSVILGIFLSVGIAFFFGMVVQYLSRLLFTFNYRRNLRWLAGLFGGVAVTSIIYFMLIKGLKGVSFMTEESTAWIAANTGRLVLYCLVVSIILMQVLYWLRVNVFKVIVLLGTFALAMAFAGNDLVNFIGVPLAGYSSYLDFNANGNGQYGTYLMGALNEPASTPVYFLVAAGIVMVYALITSKKAHNVIKTSVDLARQEEGEEMFGSSGLARSIVRFSTTTANAVSRIIPRPVGRWIDSRFNQDELIMAKGAAFDLVRASVNLVLAGLLIAFGTSLRLPLSTTYVAFMVAMGTSLADRAWSRESAVFRITGVFSVIGGWFITAGAAFILCFLVTMVNHFGGYPAMAGMIILAIFLLVRSHIRFDKKKKSETKDTVFIDMMASHDKEEIWQLLAKHIRQKQLALLDFAENNYMQMTDGFINEDLKRLRRSINDQNAERQMLKVNRRKETLGIRRIEEAKSVVKNTWFHLGCNSCEQIVFCLKRIAEPCKEHVDNNFNPLPKVCVSEFLAAREKLILYIKEAKLIVSNETDEILDPMTYRGKDIKKELKQLRKTQLSRIQQGASSLKISLVYLNLLQESQQLVNILDDLIHATEKLFDPVARIGTDEEFFN
>CP025931.1|AUR48466.1|2116058_2116682_-|Nucleoid-associated-protein
MAKFVMREMPDMQGTGKRTMYPKMISRGTMGLDEIADLISSQSTFSPGEVKGLVTALARTIAHGVASGYTVKIEEIGSFSASLTLHKGVEPEEAEGGTRRNAASVTIGGVNFRPDKALILEARTRVHLVRTTVRRPRRPNLTREERLALALRHLDGHSLLKVADYCRLTGLGRTAAAEELRAFDREGLIDSTGSGTHKVYIRNKAGI
>CP025931.1|AUR48544.1|2117093_2117669_+|threonylcarbamoyl-AMP-synthase
MLNDIQRSEAKKAAEVMRKGGIILYPTDTIWGIGCDATNEEAVRRIYRLKERADSKSMLVLIDSEAKLQGLMDEVPELAWDLIELTTKPLTIIYPQAKGVAPALIASDGSLGIRLTRETFSAELCRLMRVPIVSTSANISGQPSARTFGEIAPAILDGVDYIVECRREEPAGQASSIIRLGTRGEVEVIRQ
>CP025931.1|AUR47586.1|2117665_2119072_+|undecaprenyl-phosphate-N-acetylgalactosaminyl-1-phosphate-transferase-glycosyltransferase
MTRMQLHRLRYLLADVFGIVASYLSYNTLRYLTEEQERIYSTLSEYLFNAKSLWVGILYLLFWLSLFALSGYYNKPIAKSRISELLTTVASVLVGSVVVFLLLVVDDIVHDTALYLRLFFMMVATVLPWVYFPRLWVTTFGIKERKKTKGYHRVLLIGSGTIAEETASWLKSVNDMATTRLHFVPPTTREGFEQSLKSFATLVAEAVQESKPHQIILAVDCPDASFISLLLYQLYPFHMPVCVPMRSMLFAGAKVNVQGMKGEPMVDMTATNMSECAKSIKWFADRLFSLLMLILLIPVYAVIAVLVKRSSRGPVFFGQERIGLHGRPFTIYKFRTMYLDAEKDGPSLSFDGDSRVTPIGRILRKYRMDELPQFWNVLRGDMSFVGPRPERAFYIRQLVERAPYYYLLHNVRPGITSWGMVRYGYASTLDEMLERLQYDFLYYENMSLRLDIEVLLYTCQTIFKGLGK
>CP025931.1|AUR47423.1|2119068_2120865_+|H(+)/Cl(-)-exchange-transporter
MKDKETSRYGWFLHFLLWRERHINERLFLIILSLIIGILSAFAAVLLKNTIHIIQHFAFDRIRETSYLYLIFPVVGILITWLFVRYVVRDDIGHGVTKILFAISQRKSRIKPHNMWSSLAASSITIGFGGSVGAESPIVLTGAAIGSNLGRLFRMEQKTLMLLVGCGAAGAISGIFKAPITGLVFVIEVLLLDLTMSSVLPLLISSVSAAAVSYIITGQGAMFSFTLNDPFSMDRIPYALLLGVFCGLVSFYFSKVMFVFESKLKNFPHYRQRYLISAFILCGLIFLFPPLYGEGYDTINALLGGQYSSLMDGSLFEPYSNSYWVLFVFLGFIIITKVFASVATNSGGGCGGLFAPSLFMGALSGFIFAYALNFFPFIEVYLPQKNFALLGMAGVMAAVMHAPLTGIFLIAELTGGYNLFLPLMLVSTSSYATIRLFMPHSIYSLRLAQKGKLLTHQKDKAVLTLMTLDAVIEKDFEPVRPDMTLGDVVHVFGISHRNVFPVLDENNLLMGLVLLDNIRNIMFRPELYERFKVSRFMVSPPAKIVNTMSMETIMRIFDDTKAWNLPVIDEQGCYLGFVSKSKIFNSYREVLVETFSGD
>CP025931.1|AUR48013.1|2120825_2121824_-|small-conductance-mechanosensitive-channel
MGLKIFFPLQNLSVDTTKVNKIAEVVSPEALKQIKEIKPSQWTELLTQWGGKALSFGIKVLIALVAFYLGKLLLNALVKWLDRIMVRRSFEPAARTFLRSFANIGGFVLLIVIIISTLGFQPVSLAALLASVGVAVGMGLSGQLQNLAGGLIVLLTKPFKVGDYIVSNNVEGVVDGVTLFHTTVMTFENKYIFIPNGLLSSNVIINYSRMAVRRNEWIIGIEYNEDFDRVKTLLLRLIDEEPRIIKDPLPTVVLKELADSSVRVMARAWCATDDLWNVYWDINERIYSEFNRQGIAFPFPQLTIHGSAAGQERRGKSTEAQSPENVSTNTSL
>CP025931.1|AUR48143.1|2121926_2122814_+|Beta-barrel-assembly-enhancing-protease
MTDRFLHILRLSALCLLFSALLPPLFGQPTTTRQDSLPADYTRLIDRSFEALGQGNLELAEQALRQAIKAYPDLPSGYALMNNLGAIQQRQGKPEEALLTYSAALQKLPDDKLLRTNRAMLLTEMGRTDEAIFDYNELLRAEPDNEIFHYGRAMLYLAKGMYGDAESDLEEILRVNDSSLKARLGIALVATMKGEYDKAERLYNYVIDKLPKNAAAYEGRARLFLNKGMKGYALRDINKAFEYATPPAASLFVLRGEINAAIGDKKAAAEDYAVAESRGYSKESLDLLRAALRKQ

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Crispr_ID: CP025931_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025931_6

2124543-2124651

TypeIII

Consensus_repeat	Method
AGGAAGCCGTTGTCACGTGACAATCAC	CRISPRCasFinder

1 spacers

cas2,cas1,cmr6gr7,cmr5gr11,cmr4gr7

The CRISPR arrays of CP025931_6

>merge|CP025931|6|2124543-2124651|CRISPRCasFinder
AGGAAGCCGTTGTCACGTGACAATCACTCCGTGCATGATGCAGGAAGCCGTTGTCACGTGACAATCACTCCGTGCACGATGCAGGAAGCCGTCGTCACGTGACAATCAC

>CP025931|6|6|2124543-2124651|CRISPRCasFinder
AGGAAGCCGTTGTCACGTGACAATCAC	TCCGTGCATGATGCAGGAAGCCGTTGTCACGTGACAATCACTCCGTGCACGATGC
AGGAAGCCGTCGTCACGTGACAATCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025931.1\|AUR48466.1\|2116058_2116682_-\|Nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|273496
CP025931.1\|AUR48143.1\|2121926_2122814_+\|Beta-barrel-assembly-enhancing-protease	unknown	unknown	gnl\|CDD\|274350
CP025931.1\|AUR48730.1\|2137944_2138382_-\|CRISPR-associated-RAMP-Cmr5	cmr5gr11	mkCas0098_cmr5gr11_CAS-III-B	unknown
CP025931.1\|AUR47314.1\|2113594_2115862_-\|putative-low-affinity-inorganic-phosphate-transporter	unknown	unknown	gnl\|CDD\|376541
CP025931.1\|AUR48265.1\|2137174_2137948_-\|CRISPR-associated-RAMP-Cmr6	cmr6gr7	cd09661_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
CP025931.1\|AUR47586.1\|2117665_2119072_+\|undecaprenyl-phosphate-N-acetylgalactosaminyl-1-phosphate-transferase-glycosyltransferase	unknown	unknown	gnl\|CDD\|274398
CP025931.1\|AUR48544.1\|2117093_2117669_+\|threonylcarbamoyl-AMP-synthase	unknown	unknown	gnl\|CDD\|376519
CP025931.1\|AUR47222.1\|2134017_2137113_-\|CRISPR-associated-protein-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
CP025931.1\|AUR48365.1\|2138378_2139080_-\|CRISPR-associated-RAMP-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|187813
CP025931.1\|AUR47940.1\|2127975_2129028_+\|hemagglutinin	unknown	unknown	unknown
CP025931.1\|AUR47887.1\|2126671_2127763_-\|hypothetical-protein	unknown	unknown	unknown
CP025931.1\|AUR47939.1\|2124828_2125881_+\|hemagglutinin	unknown	unknown	unknown
CP025931.1\|AUR47423.1\|2119068_2120865_+\|H(+)/Cl(-)-exchange-transporter	unknown	unknown	gnl\|CDD\|238233
CP025931.1\|AUR48904.1\|2113132_2113372_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
CP025931.1\|AUR48013.1\|2120825_2121824_-\|small-conductance-mechanosensitive-channel	unknown	unknown	gnl\|CDD\|182386
CP025931.1\|AUR48935.1\|2112924_2113113_-\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|177033
CP025931.1\|AUR48866.1\|2133707_2133998_-\|CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
CP025931.1\|AUR48053.1\|2123320_2124277_-\|Por-secretion-system-C-terminal-sorting-domain	unknown	unknown	gnl\|CDD\|275036
CP025931.1\|AUR48521.1\|2131421_2132012_-\|hypothetical-protein	unknown	unknown	unknown
CP025931.1\|AUR47373.1\|2129388_2131392_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378965

Protein	Function_ID	Function_description	E-value
CP025931.1\|AUR48466.1\|2116058_2116682_-\|Nucleoid-associated-protein	gnl\|CDD\|273496	TIGR01201, HU_rel, DNA-binding protein, histone-like, putative. This model describes a set of proteins related to but longer than DNA-binding protein HU. Its distinctive domain architecture compared to HU and related histone-like DNA-binding proteins justifies the designation as superfamily. Members include, so far, one from Bacteroides fragilis, a gut bacterium, and ten from Porphyromonas gingivalis, an oral anaerobe. [DNA metabolism, Chromosome-associated proteins].	7.03433e-42
CP025931.1\|AUR48143.1\|2121926_2122814_+\|Beta-barrel-assembly-enhancing-protease	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	3.69614e-15
CP025931.1\|AUR47314.1\|2113594_2115862_-\|putative-low-affinity-inorganic-phosphate-transporter	gnl\|CDD\|376541	pfam01384, PHO4, Phosphate transporter family. This family includes PHO-4 from Neurospora crassa which is a is a Na(+)-phosphate symporter. This family also contains the leukaemia virus receptor.	3.15944e-08
CP025931.1\|AUR48265.1\|2137174_2137948_-\|CRISPR-associated-RAMP-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.45991e-60
CP025931.1\|AUR47586.1\|2117665_2119072_+\|undecaprenyl-phosphate-N-acetylgalactosaminyl-1-phosphate-transferase-glycosyltransferase	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	1.55214e-129
CP025931.1\|AUR48544.1\|2117093_2117669_+\|threonylcarbamoyl-AMP-synthase	gnl\|CDD\|376519	pfam01300, Sua5_yciO_yrdC, Telomere recombination. This domain has been shown to bind preferentially to dsRNA. The domain is found in SUA5 as well as HypF and YrdC. It has also been shown to be required for telomere recombniation in yeast.	4.65026e-52
CP025931.1\|AUR47222.1\|2134017_2137113_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	5.81881e-68
CP025931.1\|AUR48365.1\|2138378_2139080_-\|CRISPR-associated-RAMP-Cmr4	gnl\|CDD\|187813	cd09682, Cmr4_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	3.5941e-85
CP025931.1\|AUR47423.1\|2119068_2120865_+\|H(+)/Cl(-)-exchange-transporter	gnl\|CDD\|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	9.43748e-102
CP025931.1\|AUR48904.1\|2113132_2113372_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	6.96682e-31
CP025931.1\|AUR48013.1\|2120825_2121824_-\|small-conductance-mechanosensitive-channel	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	3.6272e-60
CP025931.1\|AUR48935.1\|2112924_2113113_-\|50S-ribosomal-protein-L33	gnl\|CDD\|177033	CHL00104, rpl33, ribosomal protein L33.	1.21956e-18
CP025931.1\|AUR48866.1\|2133707_2133998_-\|CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.2336e-16
CP025931.1\|AUR48053.1\|2123320_2124277_-\|Por-secretion-system-C-terminal-sorting-domain	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	4.1377e-10
CP025931.1\|AUR47373.1\|2129388_2131392_-\|hypothetical-protein	gnl\|CDD\|378965	pfam12836, HHH_3, Helix-hairpin-helix motif. The HhH domain is a short DNA-binding domain.	0.000696007

>CP025931.1|AUR48053.1|2123320_2124277_-|Por-secretion-system-C-terminal-sorting-domain
MKNQRFLMLLASILVFGSMAFAQVPKGNDKSKDEHILTWALPEELVIDNNSIVATYNSFLTPFNGMTMACASFFDVQDLLPYVGYTINRIDFHPTADEKNYEQVAASKFYICIWGNKEQTEVLYEQALPTIHKEDLSFGYGVDGEEDYYDEPMYLAELETPFVIPAGKALYIGCRVETQEGHAVGFGLDDGPAMKGKGDLVGSYLPGAAPMPFVPLSDIPARSMDANFFIYSRISLGSGTQDILQHRMKVYPNPATTELHVEALSAWVGEQAAVYDMRGRRVSARMVDSEKLCIDIASLPAGVYVLRIGSYSAKFEKR
>CP025931.1|AUR48143.1|2121926_2122814_+|Beta-barrel-assembly-enhancing-protease
MTDRFLHILRLSALCLLFSALLPPLFGQPTTTRQDSLPADYTRLIDRSFEALGQGNLELAEQALRQAIKAYPDLPSGYALMNNLGAIQQRQGKPEEALLTYSAALQKLPDDKLLRTNRAMLLTEMGRTDEAIFDYNELLRAEPDNEIFHYGRAMLYLAKGMYGDAESDLEEILRVNDSSLKARLGIALVATMKGEYDKAERLYNYVIDKLPKNAAAYEGRARLFLNKGMKGYALRDINKAFEYATPPAASLFVLRGEINAAIGDKKAAAEDYAVAESRGYSKESLDLLRAALRKQ
>CP025931.1|AUR48013.1|2120825_2121824_-|small-conductance-mechanosensitive-channel
MGLKIFFPLQNLSVDTTKVNKIAEVVSPEALKQIKEIKPSQWTELLTQWGGKALSFGIKVLIALVAFYLGKLLLNALVKWLDRIMVRRSFEPAARTFLRSFANIGGFVLLIVIIISTLGFQPVSLAALLASVGVAVGMGLSGQLQNLAGGLIVLLTKPFKVGDYIVSNNVEGVVDGVTLFHTTVMTFENKYIFIPNGLLSSNVIINYSRMAVRRNEWIIGIEYNEDFDRVKTLLLRLIDEEPRIIKDPLPTVVLKELADSSVRVMARAWCATDDLWNVYWDINERIYSEFNRQGIAFPFPQLTIHGSAAGQERRGKSTEAQSPENVSTNTSL
>CP025931.1|AUR47423.1|2119068_2120865_+|H(+)/Cl(-)-exchange-transporter
MKDKETSRYGWFLHFLLWRERHINERLFLIILSLIIGILSAFAAVLLKNTIHIIQHFAFDRIRETSYLYLIFPVVGILITWLFVRYVVRDDIGHGVTKILFAISQRKSRIKPHNMWSSLAASSITIGFGGSVGAESPIVLTGAAIGSNLGRLFRMEQKTLMLLVGCGAAGAISGIFKAPITGLVFVIEVLLLDLTMSSVLPLLISSVSAAAVSYIITGQGAMFSFTLNDPFSMDRIPYALLLGVFCGLVSFYFSKVMFVFESKLKNFPHYRQRYLISAFILCGLIFLFPPLYGEGYDTINALLGGQYSSLMDGSLFEPYSNSYWVLFVFLGFIIITKVFASVATNSGGGCGGLFAPSLFMGALSGFIFAYALNFFPFIEVYLPQKNFALLGMAGVMAAVMHAPLTGIFLIAELTGGYNLFLPLMLVSTSSYATIRLFMPHSIYSLRLAQKGKLLTHQKDKAVLTLMTLDAVIEKDFEPVRPDMTLGDVVHVFGISHRNVFPVLDENNLLMGLVLLDNIRNIMFRPELYERFKVSRFMVSPPAKIVNTMSMETIMRIFDDTKAWNLPVIDEQGCYLGFVSKSKIFNSYREVLVETFSGD
>CP025931.1|AUR47586.1|2117665_2119072_+|undecaprenyl-phosphate-N-acetylgalactosaminyl-1-phosphate-transferase-glycosyltransferase
MTRMQLHRLRYLLADVFGIVASYLSYNTLRYLTEEQERIYSTLSEYLFNAKSLWVGILYLLFWLSLFALSGYYNKPIAKSRISELLTTVASVLVGSVVVFLLLVVDDIVHDTALYLRLFFMMVATVLPWVYFPRLWVTTFGIKERKKTKGYHRVLLIGSGTIAEETASWLKSVNDMATTRLHFVPPTTREGFEQSLKSFATLVAEAVQESKPHQIILAVDCPDASFISLLLYQLYPFHMPVCVPMRSMLFAGAKVNVQGMKGEPMVDMTATNMSECAKSIKWFADRLFSLLMLILLIPVYAVIAVLVKRSSRGPVFFGQERIGLHGRPFTIYKFRTMYLDAEKDGPSLSFDGDSRVTPIGRILRKYRMDELPQFWNVLRGDMSFVGPRPERAFYIRQLVERAPYYYLLHNVRPGITSWGMVRYGYASTLDEMLERLQYDFLYYENMSLRLDIEVLLYTCQTIFKGLGK
>CP025931.1|AUR48544.1|2117093_2117669_+|threonylcarbamoyl-AMP-synthase
MLNDIQRSEAKKAAEVMRKGGIILYPTDTIWGIGCDATNEEAVRRIYRLKERADSKSMLVLIDSEAKLQGLMDEVPELAWDLIELTTKPLTIIYPQAKGVAPALIASDGSLGIRLTRETFSAELCRLMRVPIVSTSANISGQPSARTFGEIAPAILDGVDYIVECRREEPAGQASSIIRLGTRGEVEVIRQ
>CP025931.1|AUR48466.1|2116058_2116682_-|Nucleoid-associated-protein
MAKFVMREMPDMQGTGKRTMYPKMISRGTMGLDEIADLISSQSTFSPGEVKGLVTALARTIAHGVASGYTVKIEEIGSFSASLTLHKGVEPEEAEGGTRRNAASVTIGGVNFRPDKALILEARTRVHLVRTTVRRPRRPNLTREERLALALRHLDGHSLLKVADYCRLTGLGRTAAAEELRAFDREGLIDSTGSGTHKVYIRNKAGI
>CP025931.1|AUR47314.1|2113594_2115862_-|putative-low-affinity-inorganic-phosphate-transporter
MSLIFTAIVVFLFILAIFDLIVGVSNDAVNFLNSAIGAKAAPFKIIVGVAALGVFCGAAMNNGMMEIARHGIFRPEHYTFSELMVVFLSVVITDVVLMDMFNSLGMPTSTTVSLIFELLGGSFFMAMTKVGGTVGFQDLLNTEKALSVILGIFLSVGIAFFFGMVVQYLSRLLFTFNYRRNLRWLAGLFGGVAVTSIIYFMLIKGLKGVSFMTEESTAWIAANTGRLVLYCLVVSIILMQVLYWLRVNVFKVIVLLGTFALAMAFAGNDLVNFIGVPLAGYSSYLDFNANGNGQYGTYLMGALNEPASTPVYFLVAAGIVMVYALITSKKAHNVIKTSVDLARQEEGEEMFGSSGLARSIVRFSTTTANAVSRIIPRPVGRWIDSRFNQDELIMAKGAAFDLVRASVNLVLAGLLIAFGTSLRLPLSTTYVAFMVAMGTSLADRAWSRESAVFRITGVFSVIGGWFITAGAAFILCFLVTMVNHFGGYPAMAGMIILAIFLLVRSHIRFDKKKKSETKDTVFIDMMASHDKEEIWQLLAKHIRQKQLALLDFAENNYMQMTDGFINEDLKRLRRSINDQNAERQMLKVNRRKETLGIRRIEEAKSVVKNTWFHLGCNSCEQIVFCLKRIAEPCKEHVDNNFNPLPKVCVSEFLAAREKLILYIKEAKLIVSNETDEILDPMTYRGKDIKKELKQLRKTQLSRIQQGASSLKISLVYLNLLQESQQLVNILDDLIHATEKLFDPVARIGTDEEFFN
>CP025931.1|AUR48904.1|2113132_2113372_-|50S-ribosomal-protein-L28
MSKICQITGKKAMVGNNVSHSKRRTKRVFDVNLFRKKFYWVEQDCWVVLRISAAGLRLINKIGLDAAIKRAAEKGFLNA
>CP025931.1|AUR48935.1|2112924_2113113_-|50S-ribosomal-protein-L33
MAKKVKGNRVQVILECTEHKESGMPGISRYITTKNRKNTTQRLELKKYNPILRRMTLHKEIK
>CP025931.1|AUR47939.1|2124828_2125881_+|hemagglutinin
MTVENLRLQRLQNLEHYRFAKNVLTLCRTANIAKLNPKLPELEKAIEMEDLALNPPVANELTPQVIALDEERDRAYQALMSRVRSYAFDEDSQLRNAAARIEDVAARYGNVIRMNYDKETAAIENFLTDLKGENIRPLVTKLGVTALVDRLEKNNKAFADFFLRRLSTDQRGKYDVKALRAETDRTLVAVVRRMDSIDDMEPSPEIRALIELYNRLVANRRALLARRASYGEAAVEKRRAEIAEMLRPLLARIVEEKKTAVFAGRTLGTGKNRHYLITFVAENGDEEDRWYRINGEQLVYVPEDELPKPKKKKKPASSTDTPSEPPVLPDPSQGGSSSGGGEQGSTGGGL
>CP025931.1|AUR47887.1|2126671_2127763_-|hypothetical-protein
MQNAQSEKNLKIFFDGNKIFLLLPRISKFRIRRCRNIIPKYSKMKKSFVVGASLCIAAIFSLVSCSKQEIEEVRVMENETIKTDLPQARSIEDSVALAELVLDLETYNSSLDSDGRSTYSAGQQTFSVEGQLMNNRSFWSFFKKIAKAVAVVSADAIGVCVGSTIHPAMGVAFCATASAGTSVLLDADINVSFLKESFGPDITRSNYGVWHNNTIAAYLNEHGSLTNLDPLQFYNYSLTYCSNNIGSSTSRPLPYEKVETLCSALAQLFTSLENDNSEKTEEEICNMIVSAVPEIRAQEVKILLNFLLKMYSPDFKVEKRREYIAGHTEVVFQSRLSEAGKKRIYDMLSVACNSSLLWKQSEK
>CP025931.1|AUR47940.1|2127975_2129028_+|hemagglutinin
MTAEIFSFSRLQNLEHYRFAKNVLTLCRTANIAKLNPKLPELEKAIEMEDLALNPPVANELTPQVIALDEERDRAYQALMSRVRSYAFDEDSKLRNAAARIEDVAARYGNVIRMNYDKETAAIENFLTDLKGENIRPLVTKLGVTALVDRLEKNNKAFADFFLRRLSTDQRGKYDVKALRAETDRTLVAVVRRMDSIDDMEPSPEIRALIELYNRLVANRRALLARRASYGEAAVEKRRAEIAEMLRPLLARIVEEKKTAVFAGRTLGTGKNRHYLITFVAENGDEEDRWYRINGEQLVYVPEDELPKPKKKKKPASSTDTPSEPPVLPDPSQGGSSSGGGEQGSTGGGL
>CP025931.1|AUR47373.1|2129388_2131392_-|hypothetical-protein
MKPLLTVVCAILLSLPLGGQTVVPEWDEYIAEQIESGALGEDEGAEFLERWMVQKQHPLDINTLTREDLEQFPFLNEFQIRRFLLYRHAHPEGFDSIWVLNEIAGWDRRTCLLLWPMLTVQKRSEPAVGSFREILSYARHDVSVHTDAILQRQEGYRPDSRHPYRGDPWGGGLRWSYAMGNRFSLGLTASKDRGEPAFDKRRKGFDSYSAHFFMEGKGAVRAVALGDYRIGMGYGLLVNQASFMGMAYAYPRGGTTLRRAFTYAEDNFMRGAATALAQGRWALTAFYSRKGVDATVTEDGAIKAIYHTGLHRTDAEIVRRNAATMTTAGTSVSYTDDRLRLTFNLLHLHWGGLRLLRAVGTQGIASLTDLERFSLVSADYSYLFGQGGTELFGEFAGAANGAVGTINGLRYTHPVGGSYMLVGRYIPADYWSYYRGAFARHSRPGNEWGVMGRAAWELPSDRTVRAFADYYGSFVPRFGRKEKTEALYWMFEGEKRLSALSWSCRIRGTADKRYRRSLAVRLRGRYTFDERWRLMASLQWSRSNSFDRELQTWQAPTGGKSFALRADYSGGKLLRLCSMDAVAFDTDSFADRLYEAVHNPRHHYSSAFFYGRGVRLGMFVRIAPLPHVEIESRTDHLLRRDTDTIGSAGELIRGQARTHLFMTVRYR
>CP025931.1|AUR48521.1|2131421_2132012_-|hypothetical-protein
MKRTLVFLFLTAVLALRAEAQSAPEQSETKDFIFSPQKEKVYVAIGYPAGIGLPSLDNYNVEGASASFAVGYERGVKQLAEGLLLSIYAELDWAAFRSVSDKRSLPFSDDSAQNRFRFLAGAGVHKRLNPNIELYARGAVGASFFPENNGSSSRELKGGFNVSLRVGLSCSLRDNFAVFIDTGTSDIVRGGLALMW
>CP025931.1|AUR48866.1|2133707_2133998_-|CRISPR-associated-endoribonuclease-Cas2
MNDKKLLVAYDISSNRRRRKVARILEQCGIRINKSVFICSLRELTMDKLVEAVTSQTAKRDKVFFLPLCQHCYTAAWMSGHPTLPKSRRKRKSIVV
>CP025931.1|AUR47222.1|2134017_2137113_-|CRISPR-associated-protein-Cas1
MPLSTDSLPIFLSDFTAYHFSVRFRAERAIAFERKWYFMPRFALGNALKNSEQYAYLYGQIFKPQEEDTDESKGPGNTSRLIIRADKPSRKSLEAGEAMDLYITVVTRDPLLVGDFLSFLPEWQAYNFFRENDLTYDSYRLYNPTTQKYESGLRVEDAALTVDFFSRQAIRWGEILSVRFLSPASIKVDQILSAEIPYSRLMNRLSRRLYELYTQYLSRGETSVERYIFPDHDGLIYSQISMPRKATIKENRQYDMSGILGQLFYRVPYDPVAALMLSMAHWVHIGNHTIVGNGQIESTPCNDTLYRKWLSSLAADRDLPMAETERQDLLEALRICSYIPQPYHSVNIPKGDGSYRQLHIPSAVDLHLQRSLAGILYPITESLSIAQSYAYRKGKGAVAAVRRVQHLLDSLDENYTVVRCDIDNFFDSIPVPSLLQKVQRTTEDPLLTRMLSLWMKSGVVDRKQQYAPASSGIPQGSPLALLLSNLYLEDTDRYIAGHITTEFIRYADDLLLFLPEKVDPLNALQDLSEHLKYRKGLKLNRDFVVSSIKSSFSFLGITFCADGSRSMSRDKKEGLKRKITLALHRDTENFSALSETIHGMEQYYRKLLEKVDIEAIDEVAATVYATYIASLPTSEARKSAKDNLLRLGFLSSETAKQTLREAMRQTEVSSADNFPIKKESEILREQQKRQLQERGEIFDLVVTEPGAFIGISRNHVLVRKYGKTICKQPAAQIEQISIISDGVSLSSNVTKYCRKKNIRVIFYNATGQAYASLNGMNTILPSVMEAQMRLSEEKKREFILTLIKNKVRNQGKLLRYYHKYYRHDKELKEPLSNAIAELKQLEGIPIAEGSSLADFRQHAMLHEARCAQVYWRAFALLVHRSGHEFEGREHKGAEGLVNQMLNYGYAILRSYVMKTIDLWQLNPNIGILHSTQDNKPALCFDLMEQYRAFVVDRSILALLAKGEDVGQNNKGLLDMPTRSRIISKINERWFATEYYRSGEKLFSDIMKLQTKDVRAFCCGKVKRIKFYTPKW
>CP025931.1|AUR48265.1|2137174_2137948_-|CRISPR-associated-RAMP-Cmr6
MNFGHWYYREYFDTINLDSKGIVTNFSTFNKGKNDKLIKGATLPPYDKENDIEDVTSFELKTCYPGLLCGVGYHHEINNPKNEPKEDDAPEVYNLGMYFDYTSGLPVIPGSSIKGMLRSAIEEWDFLADYKPQEKNTPPASLSDKKVLHEEIIKTVFEGKGLSIYDRDIFLDAIPIRVDNKLFGEDYITHHPTPLQNPNPVRFLRVNPGVTYQFRFILRNNDNGLKADFKEDLFKAIICTFGLGAKTNVGYGQFVEH
>CP025931.1|AUR48730.1|2137944_2138382_-|CRISPR-associated-RAMP-Cmr5
MNKKTIQDLIPKAMQAIEGVGIVGKDKKFKKVHEGYINALGPNIIQSGLLPTLIFYNKDERALWLRALYYMAVGEEDEMTDESSTVIIRLIIGKEGGRIENLKPKAKEWERKILEYAVALKLALRTFVAEEAETSNTKQQEGGAQ
>CP025931.1|AUR48365.1|2138378_2139080_-|CRISPR-associated-RAMP-Cmr4
MKTAAYMIHCLTNMHVGKGDATYEVVDKCVQRDVTTGMPCIYSSSLKGALRQFFSKQGFAELNYVFGKDQSRDKKNNGNEKNEEEHSVGNFTFFQANLLAYPVQTTREGATYILKTNKALQESIKELAKLLSAPSNIEDLLPEGIEKDLSNEALEQLPVIARNQLDNGKSENLWYEEVVPAESRFVFFVSYDDEEIFAKFDKIIQEKVIQIGANGSIGYGFCKIANVTNPFKK

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Crispr_ID: CP025931_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025931_7

2132965-2133307

TypeIII

Consensus_repeat	Method
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	PILER-CR
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CRISPRCasFinder
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CRT

4 spacers

cas2,cas1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7

The CRISPR arrays of CP025931_7

>merge|CP025931|7|2132965-2133307|PILER-CR,CRISPRCasFinder,CRT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGCCAAAACTGCTAAGGCTGCAGCTCAGAATGCACTAGACCAGTTGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGTATAGTTCAAGCTTCTGATACAGACTTGATTGAAGAAGAGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGCGGGAGTGCGACAAGATACTTGGCTCCGGCCGCACGATTGGGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGCGTATATCCGGCATTAGTAGGAGAGGTTATGATAAGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG

>CP025931|7|2|2132965-2133307|PILER-CR
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CCAAAACTGCTAAGGCTGCAGCTCAGAATGCACTAGACCAGTT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TATAGTTCAAGCTTCTGATACAGACTTGATTGAAGAAGA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CGGGAGTGCGACAAGATACTTGGCTCCGGCCGCACGATTGG
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CGTATATCCGGCATTAGTAGGAGAGGTTATGATAA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG

>CP025931|7|7|2132965-2133307|CRISPRCasFinder
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CCAAAACTGCTAAGGCTGCAGCTCAGAATGCACTAGACCAGTT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TATAGTTCAAGCTTCTGATACAGACTTGATTGAAGAAGA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CGGGAGTGCGACAAGATACTTGGCTCCGGCCGCACGATTGG
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CGTATATCCGGCATTAGTAGGAGAGGTTATGATAA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG

>CP025931|7|2|2132965-2133307|CRT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CCAAAACTGCTAAGGCTGCAGCTCAGAATGCACTAGACCAGTT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TATAGTTCAAGCTTCTGATACAGACTTGATTGAAGAAGA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CGGGAGTGCGACAAGATACTTGGCTCCGGCCGCACGATTGG
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CGTATATCCGGCATTAGTAGGAGAGGTTATGATAA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG

Protein	Signature genes	Signature genes Name	Protein_function
CP025931.1\|AUR47484.1\|2143659_2145243_-\|outer-membrane-protein	unknown	unknown	unknown
CP025931.1\|AUR47776.1\|2139093_2140305_-\|CRISPR-associated-RAMP-Cmr3	cmr3gr5	cd09656_cmr3gr5_CAS-III-B	gnl\|CDD\|273855
CP025931.1\|AUR48143.1\|2121926_2122814_+\|Beta-barrel-assembly-enhancing-protease	unknown	unknown	gnl\|CDD\|274350
CP025931.1\|AUR47373.1\|2129388_2131392_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378965
CP025931.1\|AUR48265.1\|2137174_2137948_-\|CRISPR-associated-RAMP-Cmr6	cmr6gr7	cd09661_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
CP025931.1\|AUR47586.1\|2117665_2119072_+\|undecaprenyl-phosphate-N-acetylgalactosaminyl-1-phosphate-transferase-glycosyltransferase	unknown	unknown	gnl\|CDD\|274398
CP025931.1\|AUR48730.1\|2137944_2138382_-\|CRISPR-associated-RAMP-Cmr5	cmr5gr11	mkCas0098_cmr5gr11_CAS-III-B	unknown
CP025931.1\|AUR47222.1\|2134017_2137113_-\|CRISPR-associated-protein-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
CP025931.1\|AUR48521.1\|2131421_2132012_-\|hypothetical-protein	unknown	unknown	unknown
CP025931.1\|AUR47939.1\|2124828_2125881_+\|hemagglutinin	unknown	unknown	unknown
CP025931.1\|AUR47423.1\|2119068_2120865_+\|H(+)/Cl(-)-exchange-transporter	unknown	unknown	gnl\|CDD\|238233
CP025931.1\|AUR47506.1\|2140306_2141845_-\|CRISPR-associated-RAMP-Cmr2	cas10	cls000742_cas10_CAS-III	gnl\|CDD\|274208
CP025931.1\|AUR47940.1\|2127975_2129028_+\|hemagglutinin	unknown	unknown	unknown
CP025931.1\|AUR48013.1\|2120825_2121824_-\|small-conductance-mechanosensitive-channel	unknown	unknown	gnl\|CDD\|182386
CP025931.1\|AUR48900.1\|2143406_2143658_-\|hypothetical-protein	cmr1gr7	mkCas0102_cmr1gr7_CAS-III-B	unknown
CP025931.1\|AUR48365.1\|2138378_2139080_-\|CRISPR-associated-RAMP-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|187813
CP025931.1\|AUR47887.1\|2126671_2127763_-\|hypothetical-protein	unknown	unknown	unknown
CP025931.1\|AUR48053.1\|2123320_2124277_-\|Por-secretion-system-C-terminal-sorting-domain	unknown	unknown	gnl\|CDD\|275036
CP025931.1\|AUR47559.1\|2141948_2143400_-\|hypothetical-protein	cmr1gr7	mkCas0086_cmr1gr7_CAS-III-B	unknown
CP025931.1\|AUR48866.1\|2133707_2133998_-\|CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856

Protein	Function_ID	Function_description	E-value
CP025931.1\|AUR48143.1\|2121926_2122814_+\|Beta-barrel-assembly-enhancing-protease	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	3.69614e-15
CP025931.1\|AUR47222.1\|2134017_2137113_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	5.81881e-68
CP025931.1\|AUR47373.1\|2129388_2131392_-\|hypothetical-protein	gnl\|CDD\|378965	pfam12836, HHH_3, Helix-hairpin-helix motif. The HhH domain is a short DNA-binding domain.	0.000696007
CP025931.1\|AUR48265.1\|2137174_2137948_-\|CRISPR-associated-RAMP-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.45991e-60
CP025931.1\|AUR47586.1\|2117665_2119072_+\|undecaprenyl-phosphate-N-acetylgalactosaminyl-1-phosphate-transferase-glycosyltransferase	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	1.55214e-129
CP025931.1\|AUR47776.1\|2139093_2140305_-\|CRISPR-associated-RAMP-Cmr3	gnl\|CDD\|273855	TIGR01888, Hypothetical_protein_SSO1730, CRISPR type III-B/RAMP module-associated protein Cmr3. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This highly divergent family is found in at least ten different archaeal and bacterial species as part of the CRISPR RAMP modulue but is not a member of the RAMP superfamily itself. A typical example is TM1793 from Thermotoga maritima.	6.74082e-71
CP025931.1\|AUR47423.1\|2119068_2120865_+\|H(+)/Cl(-)-exchange-transporter	gnl\|CDD\|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	9.43748e-102
CP025931.1\|AUR47506.1\|2140306_2141845_-\|CRISPR-associated-RAMP-Cmr2	gnl\|CDD\|274208	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B. This model represent a Crm2 family of the CRISPR-associated RAMP module, a set of six genes recurring found together in prokaryotic genomes. This gene cluster is found only in species with CRISPR repeats, usually near the repeats themselves. Because most of the six (but not this family) contain RAMP domains, and because its appearance in a genome appears to depend on other CRISPR-associated Cas genes, the set is designated the CRISPR RAMP module. This protein, typified by TM1794 from Thermotoga maritima, is designated Crm2, for CRISPR RAMP Module protein 2.	1.05209e-77
CP025931.1\|AUR48013.1\|2120825_2121824_-\|small-conductance-mechanosensitive-channel	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	3.6272e-60
CP025931.1\|AUR48365.1\|2138378_2139080_-\|CRISPR-associated-RAMP-Cmr4	gnl\|CDD\|187813	cd09682, Cmr4_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	3.5941e-85
CP025931.1\|AUR48053.1\|2123320_2124277_-\|Por-secretion-system-C-terminal-sorting-domain	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	4.1377e-10
CP025931.1\|AUR48866.1\|2133707_2133998_-\|CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.2336e-16

>CP025931.1|AUR48521.1|2131421_2132012_-|hypothetical-protein
MKRTLVFLFLTAVLALRAEAQSAPEQSETKDFIFSPQKEKVYVAIGYPAGIGLPSLDNYNVEGASASFAVGYERGVKQLAEGLLLSIYAELDWAAFRSVSDKRSLPFSDDSAQNRFRFLAGAGVHKRLNPNIELYARGAVGASFFPENNGSSSRELKGGFNVSLRVGLSCSLRDNFAVFIDTGTSDIVRGGLALMW
>CP025931.1|AUR47373.1|2129388_2131392_-|hypothetical-protein
MKPLLTVVCAILLSLPLGGQTVVPEWDEYIAEQIESGALGEDEGAEFLERWMVQKQHPLDINTLTREDLEQFPFLNEFQIRRFLLYRHAHPEGFDSIWVLNEIAGWDRRTCLLLWPMLTVQKRSEPAVGSFREILSYARHDVSVHTDAILQRQEGYRPDSRHPYRGDPWGGGLRWSYAMGNRFSLGLTASKDRGEPAFDKRRKGFDSYSAHFFMEGKGAVRAVALGDYRIGMGYGLLVNQASFMGMAYAYPRGGTTLRRAFTYAEDNFMRGAATALAQGRWALTAFYSRKGVDATVTEDGAIKAIYHTGLHRTDAEIVRRNAATMTTAGTSVSYTDDRLRLTFNLLHLHWGGLRLLRAVGTQGIASLTDLERFSLVSADYSYLFGQGGTELFGEFAGAANGAVGTINGLRYTHPVGGSYMLVGRYIPADYWSYYRGAFARHSRPGNEWGVMGRAAWELPSDRTVRAFADYYGSFVPRFGRKEKTEALYWMFEGEKRLSALSWSCRIRGTADKRYRRSLAVRLRGRYTFDERWRLMASLQWSRSNSFDRELQTWQAPTGGKSFALRADYSGGKLLRLCSMDAVAFDTDSFADRLYEAVHNPRHHYSSAFFYGRGVRLGMFVRIAPLPHVEIESRTDHLLRRDTDTIGSAGELIRGQARTHLFMTVRYR
>CP025931.1|AUR47940.1|2127975_2129028_+|hemagglutinin
MTAEIFSFSRLQNLEHYRFAKNVLTLCRTANIAKLNPKLPELEKAIEMEDLALNPPVANELTPQVIALDEERDRAYQALMSRVRSYAFDEDSKLRNAAARIEDVAARYGNVIRMNYDKETAAIENFLTDLKGENIRPLVTKLGVTALVDRLEKNNKAFADFFLRRLSTDQRGKYDVKALRAETDRTLVAVVRRMDSIDDMEPSPEIRALIELYNRLVANRRALLARRASYGEAAVEKRRAEIAEMLRPLLARIVEEKKTAVFAGRTLGTGKNRHYLITFVAENGDEEDRWYRINGEQLVYVPEDELPKPKKKKKPASSTDTPSEPPVLPDPSQGGSSSGGGEQGSTGGGL
>CP025931.1|AUR47887.1|2126671_2127763_-|hypothetical-protein
MQNAQSEKNLKIFFDGNKIFLLLPRISKFRIRRCRNIIPKYSKMKKSFVVGASLCIAAIFSLVSCSKQEIEEVRVMENETIKTDLPQARSIEDSVALAELVLDLETYNSSLDSDGRSTYSAGQQTFSVEGQLMNNRSFWSFFKKIAKAVAVVSADAIGVCVGSTIHPAMGVAFCATASAGTSVLLDADINVSFLKESFGPDITRSNYGVWHNNTIAAYLNEHGSLTNLDPLQFYNYSLTYCSNNIGSSTSRPLPYEKVETLCSALAQLFTSLENDNSEKTEEEICNMIVSAVPEIRAQEVKILLNFLLKMYSPDFKVEKRREYIAGHTEVVFQSRLSEAGKKRIYDMLSVACNSSLLWKQSEK
>CP025931.1|AUR47939.1|2124828_2125881_+|hemagglutinin
MTVENLRLQRLQNLEHYRFAKNVLTLCRTANIAKLNPKLPELEKAIEMEDLALNPPVANELTPQVIALDEERDRAYQALMSRVRSYAFDEDSQLRNAAARIEDVAARYGNVIRMNYDKETAAIENFLTDLKGENIRPLVTKLGVTALVDRLEKNNKAFADFFLRRLSTDQRGKYDVKALRAETDRTLVAVVRRMDSIDDMEPSPEIRALIELYNRLVANRRALLARRASYGEAAVEKRRAEIAEMLRPLLARIVEEKKTAVFAGRTLGTGKNRHYLITFVAENGDEEDRWYRINGEQLVYVPEDELPKPKKKKKPASSTDTPSEPPVLPDPSQGGSSSGGGEQGSTGGGL
>CP025931.1|AUR48053.1|2123320_2124277_-|Por-secretion-system-C-terminal-sorting-domain
MKNQRFLMLLASILVFGSMAFAQVPKGNDKSKDEHILTWALPEELVIDNNSIVATYNSFLTPFNGMTMACASFFDVQDLLPYVGYTINRIDFHPTADEKNYEQVAASKFYICIWGNKEQTEVLYEQALPTIHKEDLSFGYGVDGEEDYYDEPMYLAELETPFVIPAGKALYIGCRVETQEGHAVGFGLDDGPAMKGKGDLVGSYLPGAAPMPFVPLSDIPARSMDANFFIYSRISLGSGTQDILQHRMKVYPNPATTELHVEALSAWVGEQAAVYDMRGRRVSARMVDSEKLCIDIASLPAGVYVLRIGSYSAKFEKR
>CP025931.1|AUR48143.1|2121926_2122814_+|Beta-barrel-assembly-enhancing-protease
MTDRFLHILRLSALCLLFSALLPPLFGQPTTTRQDSLPADYTRLIDRSFEALGQGNLELAEQALRQAIKAYPDLPSGYALMNNLGAIQQRQGKPEEALLTYSAALQKLPDDKLLRTNRAMLLTEMGRTDEAIFDYNELLRAEPDNEIFHYGRAMLYLAKGMYGDAESDLEEILRVNDSSLKARLGIALVATMKGEYDKAERLYNYVIDKLPKNAAAYEGRARLFLNKGMKGYALRDINKAFEYATPPAASLFVLRGEINAAIGDKKAAAEDYAVAESRGYSKESLDLLRAALRKQ
>CP025931.1|AUR48013.1|2120825_2121824_-|small-conductance-mechanosensitive-channel
MGLKIFFPLQNLSVDTTKVNKIAEVVSPEALKQIKEIKPSQWTELLTQWGGKALSFGIKVLIALVAFYLGKLLLNALVKWLDRIMVRRSFEPAARTFLRSFANIGGFVLLIVIIISTLGFQPVSLAALLASVGVAVGMGLSGQLQNLAGGLIVLLTKPFKVGDYIVSNNVEGVVDGVTLFHTTVMTFENKYIFIPNGLLSSNVIINYSRMAVRRNEWIIGIEYNEDFDRVKTLLLRLIDEEPRIIKDPLPTVVLKELADSSVRVMARAWCATDDLWNVYWDINERIYSEFNRQGIAFPFPQLTIHGSAAGQERRGKSTEAQSPENVSTNTSL
>CP025931.1|AUR47423.1|2119068_2120865_+|H(+)/Cl(-)-exchange-transporter
MKDKETSRYGWFLHFLLWRERHINERLFLIILSLIIGILSAFAAVLLKNTIHIIQHFAFDRIRETSYLYLIFPVVGILITWLFVRYVVRDDIGHGVTKILFAISQRKSRIKPHNMWSSLAASSITIGFGGSVGAESPIVLTGAAIGSNLGRLFRMEQKTLMLLVGCGAAGAISGIFKAPITGLVFVIEVLLLDLTMSSVLPLLISSVSAAAVSYIITGQGAMFSFTLNDPFSMDRIPYALLLGVFCGLVSFYFSKVMFVFESKLKNFPHYRQRYLISAFILCGLIFLFPPLYGEGYDTINALLGGQYSSLMDGSLFEPYSNSYWVLFVFLGFIIITKVFASVATNSGGGCGGLFAPSLFMGALSGFIFAYALNFFPFIEVYLPQKNFALLGMAGVMAAVMHAPLTGIFLIAELTGGYNLFLPLMLVSTSSYATIRLFMPHSIYSLRLAQKGKLLTHQKDKAVLTLMTLDAVIEKDFEPVRPDMTLGDVVHVFGISHRNVFPVLDENNLLMGLVLLDNIRNIMFRPELYERFKVSRFMVSPPAKIVNTMSMETIMRIFDDTKAWNLPVIDEQGCYLGFVSKSKIFNSYREVLVETFSGD
>CP025931.1|AUR47586.1|2117665_2119072_+|undecaprenyl-phosphate-N-acetylgalactosaminyl-1-phosphate-transferase-glycosyltransferase
MTRMQLHRLRYLLADVFGIVASYLSYNTLRYLTEEQERIYSTLSEYLFNAKSLWVGILYLLFWLSLFALSGYYNKPIAKSRISELLTTVASVLVGSVVVFLLLVVDDIVHDTALYLRLFFMMVATVLPWVYFPRLWVTTFGIKERKKTKGYHRVLLIGSGTIAEETASWLKSVNDMATTRLHFVPPTTREGFEQSLKSFATLVAEAVQESKPHQIILAVDCPDASFISLLLYQLYPFHMPVCVPMRSMLFAGAKVNVQGMKGEPMVDMTATNMSECAKSIKWFADRLFSLLMLILLIPVYAVIAVLVKRSSRGPVFFGQERIGLHGRPFTIYKFRTMYLDAEKDGPSLSFDGDSRVTPIGRILRKYRMDELPQFWNVLRGDMSFVGPRPERAFYIRQLVERAPYYYLLHNVRPGITSWGMVRYGYASTLDEMLERLQYDFLYYENMSLRLDIEVLLYTCQTIFKGLGK
>CP025931.1|AUR48866.1|2133707_2133998_-|CRISPR-associated-endoribonuclease-Cas2
MNDKKLLVAYDISSNRRRRKVARILEQCGIRINKSVFICSLRELTMDKLVEAVTSQTAKRDKVFFLPLCQHCYTAAWMSGHPTLPKSRRKRKSIVV
>CP025931.1|AUR47222.1|2134017_2137113_-|CRISPR-associated-protein-Cas1
MPLSTDSLPIFLSDFTAYHFSVRFRAERAIAFERKWYFMPRFALGNALKNSEQYAYLYGQIFKPQEEDTDESKGPGNTSRLIIRADKPSRKSLEAGEAMDLYITVVTRDPLLVGDFLSFLPEWQAYNFFRENDLTYDSYRLYNPTTQKYESGLRVEDAALTVDFFSRQAIRWGEILSVRFLSPASIKVDQILSAEIPYSRLMNRLSRRLYELYTQYLSRGETSVERYIFPDHDGLIYSQISMPRKATIKENRQYDMSGILGQLFYRVPYDPVAALMLSMAHWVHIGNHTIVGNGQIESTPCNDTLYRKWLSSLAADRDLPMAETERQDLLEALRICSYIPQPYHSVNIPKGDGSYRQLHIPSAVDLHLQRSLAGILYPITESLSIAQSYAYRKGKGAVAAVRRVQHLLDSLDENYTVVRCDIDNFFDSIPVPSLLQKVQRTTEDPLLTRMLSLWMKSGVVDRKQQYAPASSGIPQGSPLALLLSNLYLEDTDRYIAGHITTEFIRYADDLLLFLPEKVDPLNALQDLSEHLKYRKGLKLNRDFVVSSIKSSFSFLGITFCADGSRSMSRDKKEGLKRKITLALHRDTENFSALSETIHGMEQYYRKLLEKVDIEAIDEVAATVYATYIASLPTSEARKSAKDNLLRLGFLSSETAKQTLREAMRQTEVSSADNFPIKKESEILREQQKRQLQERGEIFDLVVTEPGAFIGISRNHVLVRKYGKTICKQPAAQIEQISIISDGVSLSSNVTKYCRKKNIRVIFYNATGQAYASLNGMNTILPSVMEAQMRLSEEKKREFILTLIKNKVRNQGKLLRYYHKYYRHDKELKEPLSNAIAELKQLEGIPIAEGSSLADFRQHAMLHEARCAQVYWRAFALLVHRSGHEFEGREHKGAEGLVNQMLNYGYAILRSYVMKTIDLWQLNPNIGILHSTQDNKPALCFDLMEQYRAFVVDRSILALLAKGEDVGQNNKGLLDMPTRSRIISKINERWFATEYYRSGEKLFSDIMKLQTKDVRAFCCGKVKRIKFYTPKW
>CP025931.1|AUR48265.1|2137174_2137948_-|CRISPR-associated-RAMP-Cmr6
MNFGHWYYREYFDTINLDSKGIVTNFSTFNKGKNDKLIKGATLPPYDKENDIEDVTSFELKTCYPGLLCGVGYHHEINNPKNEPKEDDAPEVYNLGMYFDYTSGLPVIPGSSIKGMLRSAIEEWDFLADYKPQEKNTPPASLSDKKVLHEEIIKTVFEGKGLSIYDRDIFLDAIPIRVDNKLFGEDYITHHPTPLQNPNPVRFLRVNPGVTYQFRFILRNNDNGLKADFKEDLFKAIICTFGLGAKTNVGYGQFVEH
>CP025931.1|AUR48730.1|2137944_2138382_-|CRISPR-associated-RAMP-Cmr5
MNKKTIQDLIPKAMQAIEGVGIVGKDKKFKKVHEGYINALGPNIIQSGLLPTLIFYNKDERALWLRALYYMAVGEEDEMTDESSTVIIRLIIGKEGGRIENLKPKAKEWERKILEYAVALKLALRTFVAEEAETSNTKQQEGGAQ
>CP025931.1|AUR48365.1|2138378_2139080_-|CRISPR-associated-RAMP-Cmr4
MKTAAYMIHCLTNMHVGKGDATYEVVDKCVQRDVTTGMPCIYSSSLKGALRQFFSKQGFAELNYVFGKDQSRDKKNNGNEKNEEEHSVGNFTFFQANLLAYPVQTTREGATYILKTNKALQESIKELAKLLSAPSNIEDLLPEGIEKDLSNEALEQLPVIARNQLDNGKSENLWYEEVVPAESRFVFFVSYDDEEIFAKFDKIIQEKVIQIGANGSIGYGFCKIANVTNPFKK
>CP025931.1|AUR47776.1|2139093_2140305_-|CRISPR-associated-RAMP-Cmr3
MSTYLIKLTPLDKFFFGQKKTFGDDNANYFVYSSHFPQQTALLGLLRYQLLQIAGEEIFKDNKIQDEHKAGELIGKQSFSPFVKDKLQFGIIQSLSPVFIIDKKKDEGKEEYFLPVGKRFQKKKEKAPYSLLHLSCEDECPPIFESRESQKEKEEAYDPKKGLASCWLSSKSHTLLNEEDFFTKDERIGIRKDYEGATNDDAFFCQRYYRFKNFKKVVEDEEGNECKQPPVRVHDFCFATVLETEKAIEHEKLNGKIVYLGGERQPFLMEVSEETFKLNIESSTLTSDEKHYTVVLLSDAMIDPDHLSKVRFASTEVKDFACLLTHVGTQKFYNKENKRQEQYLKKSATALSLQKELYARGSVFYFDTKEQANQFCEDLEKVPNFHTIGYNHAIIIEPTKTKK
>CP025931.1|AUR47506.1|2140306_2141845_-|CRISPR-associated-RAMP-Cmr2
MRELLERLPKEERPEGSFEVLSPHRDGKDVPEETSKKVGLFPDRLFAKGELEEEKLQEIKGKIFIELAEKFKNAFQDEKDGITRKIDTESDPKRKRELEEIQSRYSNAALKGEDIRKYLENYLSISCITVELSSDCNILEQLNSYLDTQELFNKASIQTDEDYMELFIEAPNNTFLKAYSQDRAFPSTSEIAVSGWEQDPPKDENGEVEYTQLTSKPGFRNCYKYLAVIKADGDGFGTYIKELKVDEEKEIKENGEKENELSRFTKSFFEFSVEVANELIQKTKAIPVYIGGDDLFLFAPVLEGNVEKDVFNLIKEIDDLFIQKEIGEGLSMSYGVSIFYYKSPMSEAIDIADSMLRKAKEEKEEKEKKKDAVAISIQKHSGQKIEFLLPCKHSSADETDRKESLYGKTVELVRAFKGDGNMLNSLIYWIEEMYEILFIEEVTQSQERINAVFDNFFDEEIHKENEVFFDLLKDFIHSMHRSEDAPRKLSDKKELLHGILRYCQFVTAKKEK
>CP025931.1|AUR47559.1|2141948_2143400_-|hypothetical-protein
MYKLEFELEQHTPIIHFQARDAGATLRASEVKPKLDKFILTQIGKRFVKKTASTTEKNFIERGIEYFQNKDEEARRVYEEEKKKGNKDAKLELCLIPGQEGALNYKLSFKLSPDAKVQYFLPMSSNPKEIDKLKSLAQEKLGVQGVEILPLTSYFANEDKAKSEPNIKRGDTPSQIKNKKRIFEKNWQKVQLATFVNTPVEGVIRFQNAGLREEVNNLITNFFMLHNFGARQSKGFGSFIISLRDGKEEEDYFDTGCACYGYSFYIPAKTLEEALRKINYFYRSLRSGFNEYRGKNEIFYAKSGMHFYATKHNFEWDKKSIKGMLFDRDKDLEGKMKKEELFAFRDLLGLSSNERWQSYKTTITKECRNKKGEKFDRIKSPIQFKPICYSKYDYIVFFDLFPEKSGIPQLKGGKVVVKSSRHKGAVLELKIQEDIDLYNVFNEIFSELNFESQVGEYDSLTDAKEIFETMKDIYEQLNKNCHE
>CP025931.1|AUR48900.1|2143406_2143658_-|hypothetical-protein
MEIETLILLCFVVVATATIIVVAIIWSYKLKIKKEELRDKTLFELERERTKDLNKWQSFSESLLETNKGLMEVYCKDNTKQKA
>CP025931.1|AUR47484.1|2143659_2145243_-|outer-membrane-protein
MEAETYSRHIFIFPFQWDYIEKRGYASYNERTDIKKFDKLFSAVSPLKRQYFEIGASEERYNEYTYFHPFARRALFGTKENPSVYHYELSDTQGSYNISVKIDGVSTTYSLQLEKIAVSVFDTGVGTVAYFLRNDKHTSFEDILRINDSGRRIYPQYMAKGDRLAAKNSFLADRIYGSLGVLDFDDDFRQFEEDISHTNIFLPPDHIRQVFGYNKMDRTEDDGCQKFVFHQESERKDIIRISPVMDDRMFFITYYHSPYYAKKLRSKPKNFRRKREYNIYEEGRFGDLWFRYIFGDRGDKTVANTSVQREDVRRTTYARWSGEGTLFGLTKDSLVGISGWELMGDHITTMYYQMATLSLVQRSTILRFSNEIASITQLILDKKTKRKTEKQVKELYGNYIRFLNETYFREVTPQIQGIEMYDMLQSNMNIEKDAKALDEEMGELFNYTTLEEQGVLNKTANLYLPITLLVGFLGINTFVEKGCITRFFNIGDPCPSTWGLLGGDIITLIVFAICLYFPIRHYFKYRK

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Crispr_ID: CP025931_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025931_8

2166942-2171252

Unclear

Consensus_repeat	Method
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CRISPRCasFinder
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CRT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	PILER-CR

65 spacers

cas2,cas1,cas4,cas3,cas7b,cas8b4,cas5,cas6

The CRISPR arrays of CP025931_8

>merge|CP025931|8|2166942-2171252|CRISPRCasFinder,CRT,PILER-CR
GTTTTAATTCCTGTATGGTGCAATTGAAATTGTCATATAGATATGACATCTTAGATATTGGTACTAGTTTTAATTCCTGTATGGTGCAATTGAAATTGTCATATAGATATGACATCTTAGATATTGGTACTAGTTTTAATTCCTGTATGGTGCAATTGAAATTGTCATATAGATATGACATCTTAGATATTGGTACTAGTTTTAATTCCTGTATGGTGCAATTGAAATTGTCATATAGATATGACATCTTAGATATTGGTACTAGTTTTAATTCCTGTATGGTGCAATTGAAATTGTCGTAACAGCAGGGATGAACTATGCGCTGCACGGTTTTAATTCCTGTATGGTGCAATTGAAATCGTTATACCTTCTATCGTCTTCAAATCTAAGGATGTTTTAATTCCTGTATGGTGCAATTGAAATGGGTGGCGAGCAATGACGCGCTCCAGAACCCGACCGGTTTTAATTCCTGTATGGTGCAATTGAAATCCTTTGCCGTACGGGCGCGGCCGTAATGCGATCAAAGGTTTTAATTCCTGTATGGTGCAATTGAAATAATACGTAGGAGGCGGACTATGATAGTAGCGATTATGTTTTAATTCCTGTATGGTGCAATTGAAATCGTCAGCGCTTCAAGTACTCCACCCGCTCCTACGAGGTTTTAATTCCTGTATGGTGCAATTGAAATTTGTAGAATCTTATGTTTTTAGAGAACTATTTAATCAGTTTTAATTCCTGTATGGTGCAATTGAAATATGAAATAACCCCAAAGATAAATCCAACTACAGGCAAAGTTTTAATTCCTGTATGGTGCAATTGAAATTAAATAATCATTTAATTGTAACATTTTGTGAATAGTTTTAATTCCTGTATGGTGCAATTGAAATATAGTATCACACAACATCAAATGTTAGATGGATATGTTTTAATTCCTGTATGGTGCAATTGAAATTTAGTAGGAGATGAAGACGACTTTTTTAACGTGGTCAAGTTTTAATTCCTGTATGGTGCAATTGAAATCTTTGTAGATTTATCGGATTATTTCGATATTATAAGTTTTAATTCCTGTATGGTGCAATTGAAATTTAATGCAAAAACTATAGTCCTCAACGCTAAAGACGCGTTTTAATTCCTGTATGGTGCAATTGAAATAGTATGCCTGACACGCGAGATCGCACCTTGTCGAGGGTTTTAATTCCTGTATGGTGCAATTGAAATACGGGCGTTGTTCAGTCGGTCGTTATCGGAGTAATCGAGTTTTAATTCCTGTATGGTGCAATTGAAATACTATTCGGGAGGGAAGATATACAACGAGACCGATGTTTTAATTCCTGTATGGTGCAATTGAAATACGGGGATGGCTCAGCCCTCGATTAGCCGGTTTCTGGCGTTTTAATTCCTGTATGGTGCAATTGAAATCTTGCCTTTAGAGCTCTTTTTTTATCAAGCTCATTGGTTTTAATTCCTGTATGGTGCAATTGAAATGCATTCGCGATTTTTCCGACCTCGAACGAATCGTATGTTTTAATTCCTGTATGGTGCAATTGAAATGACGCAGGCGCGGGCGGACGTGTATAAAAAGTACTGTTTTAATTCCTGTATGGTGCAATTGAAATTTCGGTGGCATCGTCTTCGTTCGCATACAGAACGTGTTTTAATTCCTGTATGGTGCAATTGAAATATTTCTTACGCCCCATTCAAACTCATCCAGAAATTCTGTTTTAATTCCTGTATGGTGCAATTGAAATTGTTTCAGGATTTACCGTTGTGTACGTTCTGAGCTGTTTTAATTCCTGTATGGTGCAATTGAAATGTGAACGGAGCGTCGAAACAATGCCACGTTCCGAAGTTTTAATTCCTGTATGGTGCAATTGAAATCCGAGCGATAAGACCACATAAGGAGAAACGATCCGCTGTTTTAATTCCTGTATGGTGCAATTGAAATACCTGCAATAGATATACGACATAATTTCGTATTGCAGTTTTAATTCCTGTATGGTGCAATTGAAATCCTCTAAAATCATGTACGATTTTAGGGGGTTGTTTAGTTTTAATTCCTGTATGGTGCAATTGAAATAGTAATTATTCAAATTTCTTGTTTATCGGATCTCTGTTTTAATTCCTGTATGGTGCAATTGAAATGAGGCCTCATTCGGCTCTATCTTCGCACCCGACACGTTTTAATTCCTGTATGGTGCAATTGAAATTGTTGGCTTCCAACTTGTCGGCTTTGATCTCAACATGTTTTAATTCCTGTATGGTGCAATTGAAATCCGACCTGCTTCCACCCTCTTCCGCCTTTATTCAAGTTTTAATTCCTGTATGGTGCAATTGAAATTCTTTTTTTGAAGAAAATTCATAGAAACAATGTAAGGTTTTAATTCCTGTATGGTGCAATTGAAATGCTTTTTCACCTTTCGCGCCAATCGCTCAAAGCTCAGTTTTAATTCCTGTATGGTGCAATTGAAATGCTTTTTCACCTTTCGCGCCAATCGCTCAAAGCTCAGTTTTAATTCCTGTATGGTGCAATTGAAATGTGATACGATTAATACGTTAGCGTTATTCTTCATGGTTTTAATTCCTGTATGGTGCAATTGAAATTTCTTTATCGTGATATTTTGTCCGCTCTTTTTGACGTTTTAATTCCTGTATGGTGCAATTGAAATAGGTTGCGCATTTCTTCTCCATGCAAGATGTAAACAGTTTTAATTCCTGTATGGTGCAATTGAAATTTCATGTCTATTCCTCTTCTTTATAGGTTCCTAATTTGTTTTAATTCCTGTATGGTGCAATTGAAATTAAATGCGTTCTCAATCACACCAATCTTGCCGGCGTTTTAATTCCTGTATGGTGCAATTGAAATCGTTCAGTTGTTCGCATTCAGTCGCCGACTGCCCCGTTTTAATTCCTGTATGGTGCAATTGAAATATCCACATTAGACGCATTCGCACTCGTCCAGCCCGGTTTTAATTCCTGTATGGTGCAATTGAAATCTGATGACATACAAAGAGTATATCGCGGCAATGGTGTTTTAATTCCTGTATGGTGCAATTGAAATTATCCTCGTACAGGTTTGCCACCTTGTCGGAGACGTGTTTTAATTCCTGTATGGTGCAATTGAAATATGCTTATTCAAAGGTGGATCGCGTGGTGATTTCTCAGGTTTTAATTCCTGTATGGTGCAATTGAAATCCTTCTACGATTACTGCCATTTACTTTACTTTTTTTGTTTTAATTCCTGTATGGTGCAATTGAAATTAATAGTCCACACCCCAACGCCAAAGGATGAATCGGTTTTAATTCCTGTATGGTGCAATTGAAATCGGTAATCCTCCAGCGACGCCAGCCCGTCCGTGGCGGTTTTAATTCCTGTATGGTGCAATTGAAATAACGTCGATGTCTCAGGCGACTATGGCACAGCCACAGTTTTAATTCCTGTATGGTGCAATTGAAATCGACATGCCACCCGCAGGACACGATATGCCGCGAGAGTTTTAATTCCTGTATGGTGCAATTGAAATGCGGCCCTTGTCGGCCGCTCTCTCTTTCGTTATCGAGTTTTAATTCCTGTATGGTGCAATTGAAATGCGTACCCGCCTCTGCAGTTGCAAACACAGCTGCGAGTTTTAATTCCTGTATGGTGCAATTGAAATCCAGCCTTGTTTTTCGAACCCGAGGTGGCAAGGACGTTTTAATTCCTGTATGGTGCAATTGAAATGTACAGGCGATTACGGGCGTGGTGGGTAAAGAGTTCGGTTTTAATTCCTGTATGGTGCAATTGAAATCCGCGTCGGACAAGTCCGCGGGCTGGAGACCCAGTAGTTTTAATTCCTGTATGGTGCAATTGAAATTTTCTCTGACATTAAAATAGAAATCATCGCTGAAGAGTTTTAATTCCTGTATGGTGCAATTGAAATCCTCCGCCCCCAGCCCGCTATCGACCCCCACCTGCGTTTTAATTCCTGTATGGTGCAATTGAAATAGGGCTGACGTGTATAAAAAATACCTGGGGGATAATGTTTTAATTCCTGTATGGTGCAATTGAAATCTCAACCAGTTCGGGCTGGAGGCGTCGGAGGCGGCTGTTTTAATTCCTGTATGGTGCAATTGAAATACTTCGCCGTCCGCGGTAATGTGACCAATACCGACGTTTTAATTCCTGTATGGTGCAATTGAAATCACCCACCCACGCCAGCACCCTCTGCCACCAGCGCGTTTTAATTCCTGTATGGTGCAATTGAAATAACTCAAAAAAACTACAATAAATATGCCAACAGTAGTGTTTTAATTCCTGTATGGTGCAATTGAAAT

>CP025931|8|8|2166942-2171252|CRISPRCasFinder
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTCATATAGATATGACATCTTAGATATTGGTACTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTCATATAGATATGACATCTTAGATATTGGTACTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTCATATAGATATGACATCTTAGATATTGGTACTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTCATATAGATATGACATCTTAGATATTGGTACTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTCGTAACAGCAGGGATGAACTATGCGCTGCACG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTTATACCTTCTATCGTCTTCAAATCTAAGGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GGGTGGCGAGCAATGACGCGCTCCAGAACCCGACCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTTTGCCGTACGGGCGCGGCCGTAATGCGATCAAAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATACGTAGGAGGCGGACTATGATAGTAGCGATTAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTCAGCGCTTCAAGTACTCCACCCGCTCCTACGAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTGTAGAATCTTATGTTTTTAGAGAACTATTTAATCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATGAAATAACCCCAAAGATAAATCCAACTACAGGCAAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAAATAATCATTTAATTGTAACATTTTGTGAATA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATAGTATCACACAACATCAAATGTTAGATGGATAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTAGTAGGAGATGAAGACGACTTTTTTAACGTGGTCAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTTTGTAGATTTATCGGATTATTTCGATATTATAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTAATGCAAAAACTATAGTCCTCAACGCTAAAGACGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGTATGCCTGACACGCGAGATCGCACCTTGTCGAGG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACGGGCGTTGTTCAGTCGGTCGTTATCGGAGTAATCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACTATTCGGGAGGGAAGATATACAACGAGACCGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACGGGGATGGCTCAGCCCTCGATTAGCCGGTTTCTGGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTTGCCTTTAGAGCTCTTTTTTTATCAAGCTCATTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCATTCGCGATTTTTCCGACCTCGAACGAATCGTAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GACGCAGGCGCGGGCGGACGTGTATAAAAAGTACT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCGGTGGCATCGTCTTCGTTCGCATACAGAACGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTTCTTACGCCCCATTCAAACTCATCCAGAAATTCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTTTCAGGATTTACCGTTGTGTACGTTCTGAGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTGAACGGAGCGTCGAAACAATGCCACGTTCCGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGAGCGATAAGACCACATAAGGAGAAACGATCCGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACCTGCAATAGATATACGACATAATTTCGTATTGCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTCTAAAATCATGTACGATTTTAGGGGGTTGTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGTAATTATTCAAATTTCTTGTTTATCGGATCTCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GAGGCCTCATTCGGCTCTATCTTCGCACCCGACAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTTGGCTTCCAACTTGTCGGCTTTGATCTCAACAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGACCTGCTTCCACCCTCTTCCGCCTTTATTCAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTTTTTTTGAAGAAAATTCATAGAAACAATGTAAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCTTTTTCACCTTTCGCGCCAATCGCTCAAAGCTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCTTTTTCACCTTTCGCGCCAATCGCTCAAAGCTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTGATACGATTAATACGTTAGCGTTATTCTTCATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCTTTATCGTGATATTTTGTCCGCTCTTTTTGAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGGTTGCGCATTTCTTCTCCATGCAAGATGTAAACA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCATGTCTATTCCTCTTCTTTATAGGTTCCTAATTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAAATGCGTTCTCAATCACACCAATCTTGCCGGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTTCAGTTGTTCGCATTCAGTCGCCGACTGCCCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATCCACATTAGACGCATTCGCACTCGTCCAGCCCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTGATGACATACAAAGAGTATATCGCGGCAATGGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TATCCTCGTACAGGTTTGCCACCTTGTCGGAGACGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATGCTTATTCAAAGGTGGATCGCGTGGTGATTTCTCAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTTCTACGATTACTGCCATTTACTTTACTTTTTTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAATAGTCCACACCCCAACGCCAAAGGATGAATCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGGTAATCCTCCAGCGACGCCAGCCCGTCCGTGGCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AACGTCGATGTCTCAGGCGACTATGGCACAGCCACA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGACATGCCACCCGCAGGACACGATATGCCGCGAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCGGCCCTTGTCGGCCGCTCTCTCTTTCGTTATCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCGTACCCGCCTCTGCAGTTGCAAACACAGCTGCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCAGCCTTGTTTTTCGAACCCGAGGTGGCAAGGAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTACAGGCGATTACGGGCGTGGTGGGTAAAGAGTTCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGCGTCGGACAAGTCCGCGGGCTGGAGACCCAGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTTCTCTGACATTAAAATAGAAATCATCGCTGAAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTCCGCCCCCAGCCCGCTATCGACCCCCACCTGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGGGCTGACGTGTATAAAAAATACCTGGGGGATAAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTCAACCAGTTCGGGCTGGAGGCGTCGGAGGCGGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACTTCGCCGTCCGCGGTAATGTGACCAATACCGAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CACCCACCCACGCCAGCACCCTCTGCCACCAGCGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AACTCAAAAAAACTACAATAAATATGCCAACAGTAGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT

>CP025931|8|3|2166942-2171252|CRT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTCATATAGATATGACATCTTAGATATTGGTACTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTCATATAGATATGACATCTTAGATATTGGTACTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTCATATAGATATGACATCTTAGATATTGGTACTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTCATATAGATATGACATCTTAGATATTGGTACTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTCGTAACAGCAGGGATGAACTATGCGCTGCACG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTTATACCTTCTATCGTCTTCAAATCTAAGGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GGGTGGCGAGCAATGACGCGCTCCAGAACCCGACCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTTTGCCGTACGGGCGCGGCCGTAATGCGATCAAAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATACGTAGGAGGCGGACTATGATAGTAGCGATTAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTCAGCGCTTCAAGTACTCCACCCGCTCCTACGAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTGTAGAATCTTATGTTTTTAGAGAACTATTTAATCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATGAAATAACCCCAAAGATAAATCCAACTACAGGCAAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAAATAATCATTTAATTGTAACATTTTGTGAATA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATAGTATCACACAACATCAAATGTTAGATGGATAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTAGTAGGAGATGAAGACGACTTTTTTAACGTGGTCAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTTTGTAGATTTATCGGATTATTTCGATATTATAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTAATGCAAAAACTATAGTCCTCAACGCTAAAGACGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGTATGCCTGACACGCGAGATCGCACCTTGTCGAGG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACGGGCGTTGTTCAGTCGGTCGTTATCGGAGTAATCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACTATTCGGGAGGGAAGATATACAACGAGACCGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACGGGGATGGCTCAGCCCTCGATTAGCCGGTTTCTGGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTTGCCTTTAGAGCTCTTTTTTTATCAAGCTCATTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCATTCGCGATTTTTCCGACCTCGAACGAATCGTAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GACGCAGGCGCGGGCGGACGTGTATAAAAAGTACT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCGGTGGCATCGTCTTCGTTCGCATACAGAACGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTTCTTACGCCCCATTCAAACTCATCCAGAAATTCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTTTCAGGATTTACCGTTGTGTACGTTCTGAGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTGAACGGAGCGTCGAAACAATGCCACGTTCCGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGAGCGATAAGACCACATAAGGAGAAACGATCCGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACCTGCAATAGATATACGACATAATTTCGTATTGCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTCTAAAATCATGTACGATTTTAGGGGGTTGTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGTAATTATTCAAATTTCTTGTTTATCGGATCTCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GAGGCCTCATTCGGCTCTATCTTCGCACCCGACAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTTGGCTTCCAACTTGTCGGCTTTGATCTCAACAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGACCTGCTTCCACCCTCTTCCGCCTTTATTCAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTTTTTTTGAAGAAAATTCATAGAAACAATGTAAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCTTTTTCACCTTTCGCGCCAATCGCTCAAAGCTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCTTTTTCACCTTTCGCGCCAATCGCTCAAAGCTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTGATACGATTAATACGTTAGCGTTATTCTTCATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCTTTATCGTGATATTTTGTCCGCTCTTTTTGAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGGTTGCGCATTTCTTCTCCATGCAAGATGTAAACA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCATGTCTATTCCTCTTCTTTATAGGTTCCTAATTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAAATGCGTTCTCAATCACACCAATCTTGCCGGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTTCAGTTGTTCGCATTCAGTCGCCGACTGCCCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATCCACATTAGACGCATTCGCACTCGTCCAGCCCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTGATGACATACAAAGAGTATATCGCGGCAATGGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TATCCTCGTACAGGTTTGCCACCTTGTCGGAGACGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATGCTTATTCAAAGGTGGATCGCGTGGTGATTTCTCAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTTCTACGATTACTGCCATTTACTTTACTTTTTTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAATAGTCCACACCCCAACGCCAAAGGATGAATCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGGTAATCCTCCAGCGACGCCAGCCCGTCCGTGGCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AACGTCGATGTCTCAGGCGACTATGGCACAGCCACA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGACATGCCACCCGCAGGACACGATATGCCGCGAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCGGCCCTTGTCGGCCGCTCTCTCTTTCGTTATCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCGTACCCGCCTCTGCAGTTGCAAACACAGCTGCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCAGCCTTGTTTTTCGAACCCGAGGTGGCAAGGAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTACAGGCGATTACGGGCGTGGTGGGTAAAGAGTTCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGCGTCGGACAAGTCCGCGGGCTGGAGACCCAGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTTCTCTGACATTAAAATAGAAATCATCGCTGAAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTCCGCCCCCAGCCCGCTATCGACCCCCACCTGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGGGCTGACGTGTATAAAAAATACCTGGGGGATAAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTCAACCAGTTCGGGCTGGAGGCGTCGGAGGCGGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACTTCGCCGTCCGCGGTAATGTGACCAATACCGAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CACCCACCCACGCCAGCACCCTCTGCCACCAGCGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AACTCAAAAAAACTACAATAAATATGCCAACAGTAGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT

>CP025931|8|3|2167271-2171252|PILER-CR
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTTATACCTTCTATCGTCTTCAAATCTAAGGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GGGTGGCGAGCAATGACGCGCTCCAGAACCCGACCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTTTGCCGTACGGGCGCGGCCGTAATGCGATCAAAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATACGTAGGAGGCGGACTATGATAGTAGCGATTAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTCAGCGCTTCAAGTACTCCACCCGCTCCTACGAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTGTAGAATCTTATGTTTTTAGAGAACTATTTAATCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATGAAATAACCCCAAAGATAAATCCAACTACAGGCAAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAAATAATCATTTAATTGTAACATTTTGTGAATA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATAGTATCACACAACATCAAATGTTAGATGGATAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTAGTAGGAGATGAAGACGACTTTTTTAACGTGGTCAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTTTGTAGATTTATCGGATTATTTCGATATTATAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTAATGCAAAAACTATAGTCCTCAACGCTAAAGACGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGTATGCCTGACACGCGAGATCGCACCTTGTCGAGG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACGGGCGTTGTTCAGTCGGTCGTTATCGGAGTAATCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACTATTCGGGAGGGAAGATATACAACGAGACCGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACGGGGATGGCTCAGCCCTCGATTAGCCGGTTTCTGGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTTGCCTTTAGAGCTCTTTTTTTATCAAGCTCATTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCATTCGCGATTTTTCCGACCTCGAACGAATCGTAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GACGCAGGCGCGGGCGGACGTGTATAAAAAGTACT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCGGTGGCATCGTCTTCGTTCGCATACAGAACGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTTCTTACGCCCCATTCAAACTCATCCAGAAATTCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTTTCAGGATTTACCGTTGTGTACGTTCTGAGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTGAACGGAGCGTCGAAACAATGCCACGTTCCGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGAGCGATAAGACCACATAAGGAGAAACGATCCGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACCTGCAATAGATATACGACATAATTTCGTATTGCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTCTAAAATCATGTACGATTTTAGGGGGTTGTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGTAATTATTCAAATTTCTTGTTTATCGGATCTCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GAGGCCTCATTCGGCTCTATCTTCGCACCCGACAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGTTGGCTTCCAACTTGTCGGCTTTGATCTCAACAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGACCTGCTTCCACCCTCTTCCGCCTTTATTCAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTTTTTTTGAAGAAAATTCATAGAAACAATGTAAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCTTTTTCACCTTTCGCGCCAATCGCTCAAAGCTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCTTTTTCACCTTTCGCGCCAATCGCTCAAAGCTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTGATACGATTAATACGTTAGCGTTATTCTTCATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCTTTATCGTGATATTTTGTCCGCTCTTTTTGAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGGTTGCGCATTTCTTCTCCATGCAAGATGTAAACA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCATGTCTATTCCTCTTCTTTATAGGTTCCTAATTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAAATGCGTTCTCAATCACACCAATCTTGCCGGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTTCAGTTGTTCGCATTCAGTCGCCGACTGCCCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATCCACATTAGACGCATTCGCACTCGTCCAGCCCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTGATGACATACAAAGAGTATATCGCGGCAATGGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TATCCTCGTACAGGTTTGCCACCTTGTCGGAGACGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATGCTTATTCAAAGGTGGATCGCGTGGTGATTTCTCAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTTCTACGATTACTGCCATTTACTTTACTTTTTTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAATAGTCCACACCCCAACGCCAAAGGATGAATCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGGTAATCCTCCAGCGACGCCAGCCCGTCCGTGGCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AACGTCGATGTCTCAGGCGACTATGGCACAGCCACA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGACATGCCACCCGCAGGACACGATATGCCGCGAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCGGCCCTTGTCGGCCGCTCTCTCTTTCGTTATCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCGTACCCGCCTCTGCAGTTGCAAACACAGCTGCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCAGCCTTGTTTTTCGAACCCGAGGTGGCAAGGAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTACAGGCGATTACGGGCGTGGTGGGTAAAGAGTTCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGCGTCGGACAAGTCCGCGGGCTGGAGACCCAGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTTCTCTGACATTAAAATAGAAATCATCGCTGAAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTCCGCCCCCAGCCCGCTATCGACCCCCACCTGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGGGCTGACGTGTATAAAAAATACCTGGGGGATAAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTCAACCAGTTCGGGCTGGAGGCGTCGGAGGCGGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACTTCGCCGTCCGCGGTAATGTGACCAATACCGAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CACCCACCCACGCCAGCACCCTCTGCCACCAGCGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AACTCAAAAAAACTACAATAAATATGCCAACAGTAGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP025931.1\|AUR48408.1\|2178862_2179528_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
CP025931.1\|AUR47279.1\|2159827_2162329_+\|tonB-dependent-receptor-putative	unknown	unknown	gnl\|CDD\|238657
CP025931.1\|AUR48282.1\|2155395_2156160_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|234595
CP025931.1\|AUR47593.1\|2153982_2155380_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|182787
CP025931.1\|AUR47434.1\|2163708_2165457_+\|phosphoglucomutase/phosphomannomutase-alpha/beta/alpha-domain-I	unknown	unknown	gnl\|CDD\|100092
CP025931.1\|AUR48461.1\|2153366_2153993_-\|signal-peptidase-I-T	unknown	unknown	gnl\|CDD\|274044
CP025931.1\|AUR47269.1\|2182109_2184653_-\|inner-membrane-protein-unknown-function	unknown	unknown	gnl\|CDD\|370572
CP025931.1\|AUR48889.1\|2171498_2171762_-\|CRISPR-associated-endoribonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP025931.1\|AUR48310.1\|2178122_2178866_-\|CRISPR-associated-protein-Cas5	cas5	cd09716_cas5_CAS-I-B	gnl\|CDD\|132527
CP025931.1\|AUR48808.1\|2159161_2159521_+\|hypothetical-protein	unknown	unknown	unknown
CP025931.1\|AUR47394.1\|2180174_2182106_-\|phosphoglycerol-transferase-Lipoteichoic-acid-synthase-1-arylsulfatase	unknown	unknown	gnl\|CDD\|293739
CP025931.1\|AUR48321.1\|2162898_2163636_+\|recombinational-DNA-repair-(RecF-pathway)	unknown	unknown	gnl\|CDD\|376822
CP025931.1\|AUR47987.1\|2171761_2172778_-\|CRISPR-associated-protein-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
CP025931.1\|AUR47988.1\|2175599_2176616_-\|CRISPR-associated-protein-Cas7	cas7b	cd09717_cas7b_CAS-I-B	gnl\|CDD\|132528
CP025931.1\|AUR47304.1\|2173306_2175610_-\|CRISPR-associated-helicase-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|273707
CP025931.1\|AUR47651.1\|2156172_2157510_-\|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl\|CDD\|273571
CP025931.1\|AUR48625.1\|2172774_2173287_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP025931.1\|AUR48023.1\|2157659_2158652_-\|inner-membrane-protein	unknown	unknown	gnl\|CDD\|225411
CP025931.1\|AUR47529.1\|2176626_2178126_-\|CRISPR-associated-protein-Cas8c	cas8b4	cd09715_cas8b4_CAS-I-B	gnl\|CDD\|132526
CP025931.1\|AUR47908.1\|2165715_2166801_-\|transposase-in-ISPg8	unknown	unknown	gnl\|CDD\|377531

Protein	Function_ID	Function_description	E-value
CP025931.1\|AUR48408.1\|2178862_2179528_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	1.51138e-36
CP025931.1\|AUR47279.1\|2159827_2162329_+\|tonB-dependent-receptor-putative	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.15123e-42
CP025931.1\|AUR48282.1\|2155395_2156160_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|234595	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional.	5.49312e-52
CP025931.1\|AUR47593.1\|2153982_2155380_-\|signal-peptidase-I	gnl\|CDD\|182787	PRK10861, PRK10861, signal peptidase I.	8.0144e-17
CP025931.1\|AUR47434.1\|2163708_2165457_+\|phosphoglucomutase/phosphomannomutase-alpha/beta/alpha-domain-I	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
CP025931.1\|AUR48461.1\|2153366_2153993_-\|signal-peptidase-I-T	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	3.40429e-12
CP025931.1\|AUR47269.1\|2182109_2184653_-\|inner-membrane-protein-unknown-function	gnl\|CDD\|370572	pfam09586, YfhO, Bacterial membrane protein YfhO. This protein is a conserved membrane protein. The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system. Some members of this family have been annotated as glycosyl transferases of the PMT family.	1.6397e-05
CP025931.1\|AUR48889.1\|2171498_2171762_-\|CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.04042e-30
CP025931.1\|AUR48310.1\|2178122_2178866_-\|CRISPR-associated-protein-Cas5	gnl\|CDD\|132527	TIGR03488, cas_Cas5p, CRISPR-associated protein Cas5, subtype PGING. CC Members of this protein family are cas, or CRISPR-associated, proteins. The two sequences in the alignment seed are found within cas gene clusters that are adjacent to CRISPR DNA repeats in two members of the order Bacteroidales, Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This cas protein family is unique to the Pgingi (Porphyromonas gingivalis) subtype, but shows some sequence similarity to genes of the Cas5 type (see TIGR02593).	4.70758e-157
CP025931.1\|AUR47394.1\|2180174_2182106_-\|phosphoglycerol-transferase-Lipoteichoic-acid-synthase-1-arylsulfatase	gnl\|CDD\|293739	cd16015, LTA_synthase, Lipoteichoic acid synthase like. Lipoteichoic acid (LTA) is an important cell wall polymer found in Gram-positive bacteria. It may contain long chains of ribitol or glycerol phosphate. LTA synthase catalyzes the reaction to extend the polymer by the repeated addition of glycerolphosphate (GroP) subunits to the end of the growing chain.	2.83552e-65
CP025931.1\|AUR48321.1\|2162898_2163636_+\|recombinational-DNA-repair-(RecF-pathway)	gnl\|CDD\|376822	pfam02565, RecO_C, Recombination protein O C terminal. Recombination protein O (RecO) is involved in DNA repair and pfam00470 pathway recombination.	3.22277e-19
CP025931.1\|AUR47987.1\|2171761_2172778_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	8.51691e-165
CP025931.1\|AUR47988.1\|2175599_2176616_-\|CRISPR-associated-protein-Cas7	gnl\|CDD\|132528	TIGR03489, cas_csp1, CRISPR-associated protein Cas7/Csp1, subtype PGING. Members of this protein family are Csp1, a CRISPR-associated (cas) gene marker for the Pging subtype of CRISPR/cas system, as found in Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This protein belongs to the family of DevR (TIGR01875), a regulator of development in Myxococcus xanthus located in a cas gene region. A different branch of the DevR family, Cst2 (TIGR02585), is a marker for the Tneap subtype of CRISPR/cas system.	0
CP025931.1\|AUR47304.1\|2173306_2175610_-\|CRISPR-associated-helicase-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	2.55385e-158
CP025931.1\|AUR47651.1\|2156172_2157510_-\|deoxyguanosinetriphosphate-triphosphohydrolase	gnl\|CDD\|273571	TIGR01353, dGTP_triPase, deoxyguanosinetriphosphate triphosphohydrolase, putative. dGTP triphosphohydrolase (dgt) releases inorganic triphosphate, an unusual activity reaction product, from GTP. Its activity has been called limited to the Enterobacteriaceae, although homologous sequences are detected elsewhere. This finding casts doubt on whether the activity is shared in other species. In several of these other species, the homologous gene is found in an apparent operon with dnaG, the DNA primase gene. The enzyme from E. coli was shown to bind coopertatively to single stranded DNA. The biological role of dgt is unknown. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions].	7.10378e-159
CP025931.1\|AUR48625.1\|2172774_2173287_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	3.76681e-68
CP025931.1\|AUR48023.1\|2157659_2158652_-\|inner-membrane-protein	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	6.63986e-54
CP025931.1\|AUR47529.1\|2176626_2178126_-\|CRISPR-associated-protein-Cas8c	gnl\|CDD\|132526	TIGR03487, cas_csp2, CRISPR-associated protein Cas8c/Csp2, subtype PGING. Members of this protein family are cas, or CRISPR-associated, proteins. The two sequences in the alignment seed are found within cas gene clusters that are adjacent to CRISPR DNA repeats in two members of the order Bacteroidales, Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This cas protein family is unique to the Pging (Porphyromonas gingivalis) subtype.	0
CP025931.1\|AUR47908.1\|2165715_2166801_-\|transposase-in-ISPg8	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	1.68725e-23

>CP025931.1|AUR47908.1|2165715_2166801_-|transposase-in-ISPg8
MAYQSKNTDEHVTFADALLSKRYRKAQNDFLNQVDTLNDWRPIRTLINKKYTKRQNAIGAPAYDVILLFKMLLLETWYNLSDCALEERINDSITFSRFLGLKMEEVSPDHSTISRFRSALTELGLMDKLLAQFNKQLSRHHISVREGVLVDASLVETPHKPNGSITIEVADDREDNRSEEEKEAEEDYQKQVVRRRKGTDEEARWVYKQKRYHYGYKKHCPANVQGIVQKVITTAANRSDTKEFIPLLEGANIPQGTAVLADKGYACGENRSYLQTHHLQDGIMHKAQRNRALTEEEKQGNKAISPIRSTIERTFGSIRRWFHGGRCRYRGLAKTHTQNILESIAFNLYRTPGIIMSSSLR
>CP025931.1|AUR47434.1|2163708_2165457_+|phosphoglucomutase/phosphomannomutase-alpha/beta/alpha-domain-I
METDKLLDQVRAKARIWLGTEYDDSTRKAVQAMLDNADTTELVDAFYRDLEFGTGGLRGIMGAGTNRMNRYTVGAATQGLSNYLLRVFAGSSDISVVIGYDCRNNSRFFADTAAAVFSANGIGVYLFEELRPTPEISYAIRHLGCKSGVMITASHNPKEYNGYKAYWEDGAQIIAPHDRNIIAEVNRIRSVDEIKFEAKPELIRMIGENIDSAFIAEVKALSLSPESIARHRDMKIVYTPIHGTGSTVVPRALREYGFANIIHVPEQDVVSGDFPTVHSPNPEEPAALAMAIAKAEETSADLVLASDPDADRIGVAVRNNEGRMVLINGNEICSLLIYYSIMRRKELGDLHPDDYIVKTIVTTELIRDIAKKEHVSMFDCYTGFKWIAAVIRENEGRRRYIGGGEESYGFLWEDFIRDKSSVSACALFCEMAAWALDRGMSVYRLIRSIYLEYGLYYEKGLSVVRKGKSGAEEIEAMMRNYREYAPVELGGSPVQEILDYASLEGKDFTRGEKFSLDMPTTSNVLQYKTEDGTKVSIRPSGTEPKIKFYIGVHFSVANEQELDRAYIVAEEKIATILHDLGV
>CP025931.1|AUR48321.1|2162898_2163636_+|recombinational-DNA-repair-(RecF-pathway)
MIIVSRAIVLHNTAYNDSYSIAHLFSRESGRVSYLIPRSSKRGKSGGSLRLLISPLNELEITAEHKQHRDLHFIKEAKLCSLHGRIQSDPVRNSIALFLAEFLYLILRLPEADTNLYDFVAFSIDKLEEMDGPMANFHLAFLFRLLVPLGLIPDLQFGGSVIPHWFDPADGRFVPNAPAHGRGIPPHQSTYLQLFSRITFDNMKAFRLSRAERRQVLDYLVDYYRFHLPPFPLLKTPDILSTLFD
>CP025931.1|AUR47279.1|2159827_2162329_+|tonB-dependent-receptor-putative
MKQLNIISFIIAFLFLGTSASAQQSGGSVTGTVVDKSSKEPIAYVQVFVKGTTLGTSTDANGNYSIKGIPSGNQTIVARLMGYSTCEEKVHIEKGGSRHVDLYLTEEILSLDGVVVSANRNETFRRQAPSLVTVLSPELFLKTNSTNLSQGLKFQPGLRVEDNCQNCGFNQVRINGLEGAYSQILIDSHPIFSSLAGVYGLEQMPANMIERVEVIRGGGSALFGSNAVGGVINVITKEPLRNSAEISHSTMTFDHAKGWGSFQNTTQFNGSMLTEDRKAGVMVFGQHNYRPGQDIDGDSFTELPNLRNRSLGFRSYYKTGLYSKATLEYHSMQEYRRGGDRLDNPPFEAQIAEYLQHYINGGSFKFDQGFSGGKDFFSLYASAQDVQRRSYYGGGDYTENLLNGAVQSGSTESDEYNNAFTALTSYGTTKGFDLQGGGMYRHTFGENWDFTGGLEYIYGQLDDRSGYRPSKIDQNTSTFSQYDQLEYKTEKLSALIGARIDYVLLNQDGKRYIDPLFIFSPRANVRYNPNKNLSFRLSYSEGFRAPQYFDEDLHVELAGGTPISRVLSPNLKEERSRSISASFDYYHRADEWQFNIMGEAFSTFISNQFKPSDKVETTSDGKEWIIRTIYNDKDGVSKVYGVNLEGRIAYNKSFDLQLGGTWQRSRYGSIYTAVEADKTTGQAEISVKDYVRTPNLYGYFVATVRPTEHFAINLSGTFTGKMDVVHEAYEGDIPAEHIAPDGSFDFEMNGQQFKGLAEGHAKLVKTPAFADIDLKLSHDFHLASTMTLELNAGIQNIFNSYQKDTDKGPGRASTYVYGPMQPRRIFVGTKINF
>CP025931.1|AUR48808.1|2159161_2159521_+|hypothetical-protein
MKERLNQTVRYFLPILFAVYAGLVISFTHVHIINGVIIVHSHVQWGDNESDPQDNPHSDSELILYNQLSAIFTTYLDTPAIDLKEPVRVVGVVPFFCDNLTALISELTPSNHLRAPPVA
>CP025931.1|AUR48023.1|2157659_2158652_-|inner-membrane-protein
MNTDNPKSHISRIAYPAIIVFLILTLLGSLVERFHPFTSWLTPPVALLMGLAYALIFGSTHRRANKLGSKVLLQYSVVGLGFGMNLGESLASGRDGMMFTIISVFGTLLLGWFIGRKILQMNRNTSALISAGTAICGGSAIAAVGPILKAEEHEMSVALGTVFLLNAVALFIFPSIGHWLALDQQQFGTWAAIAIHDTSSVVGAGSAYGEEALRVATTIKLTRALWIVPLTLVFSFVYKTKGAKRFPVPLFILFFIGAIILNTYLLEAYFPEVGRFVASLARKGLTLSLFFIGASLTKEVIASVGVRALLQGLFLWILISVGSLAFILLI
>CP025931.1|AUR47651.1|2156172_2157510_-|deoxyguanosinetriphosphate-triphosphohydrolase
MMQWERLLSDKRVGMEHYHQPKQSAQPWERTDFERDYDRMVFSSPFRRLQNKAQVFPLAGNIFVHNRLTHSLEVSCVGRSLGNNITRGLKARYGELPWESGAISAIVSAACLAHDMGNPPFGHSGERAISAYFREGKGRVWEDAVRKEGGRWEDFLHFEGNANAFRLLTHQFEGRRKGGFALTYSTVASIVKYPYSSEMAGKAGKFGFFATEEDTFLMIAEELGMLCRNEHPVKYARYPLVYLVEAADDICYQIMDIEDAYKLRILTYAETENLFLAFCPEEELRHIRGVLDHITDANEQIAYLRSRVISLLVESCTRVFLDHEDEILSGTFSGTLIGAMEPRLKEAYGACARMAYSKIYVARDVVDVELAGHQIFGALIDKMMQALTNPDHAYSRTLLSRVSTQYNIREESLYGKIQCTLDYISGMTDIYALDLYRKITGMNLR
>CP025931.1|AUR48282.1|2155395_2156160_-|4-hydroxy-tetrahydrodipicolinate-reductase
MALAAGYGSFFQEENPMKIVLIGYGKMGHVIERIACSRGHEVVLTIDAGEEDRFDSIAFRSADVAIEFTRPDAAYANCSRCMDKSVPVVCGTTGWTERLPVLEERCRREGKTLFWASNFSIGVNLFFSLGRMFARLMSRHDQYRPHLTEIHHVHKLDAPSGTAITLAEGLIAESPSLDAWRLTETPEENELPITSIREGEVPGTHSISYTSEVDRLTICHEAFGREGFALGAVLAAEYAATHKGFLTMNDLISL
>CP025931.1|AUR47593.1|2153982_2155380_-|signal-peptidase-I
MTFHWKDLTPWRRIKGVAITILYLLFCIWAGPFWLIFLPLIVDYYFFHIIKWGWYKNIRNKTLRIICSWVADIIYCVVAVTFIFAFLFQNFAIPTSSLEKTLLIGDYLFVSKLSYGPRSPMTPLGVPLTHNTMPLTGGKSFSDKPLLPYKRLKGFGHVKEGDLVVFNFPAGDTVAVKQPNPDYYMWKKLVGREELWSNPDFYGEIVYRPVDRRDHYVKRCVGMPGQELSIRNNQIYIDGKEQRNPRNMQLNYLVRMSREMSVDLIDELGISYDDVRAASSEELKASVGSNLIDSASNQPQIIYHLPLTQGMLDKLQAEPSFVKAVEEPTPIGPLYPLEYETGWTRDNYGPIVIPAKGMTVRLTPLNLALYSRCIRNFEGNKLVQKADGTVLINGRTADSYTFKMDYYFMMGDNRHNSADSRYWGFVPEDHIVGKPVFIWLSLNKDKSLFGGKIRFGRMMRTVNAD
>CP025931.1|AUR48461.1|2153366_2153993_-|signal-peptidase-I-T
MQIKSRYRNRIFFIGLPAVVLLSAVLIRLFLVTTYRVRSDAMLPTYRSGKLLWINRIASPDRGDILVIKYRQDGEADSRFYLARLIGLPGDTLFLSKGGVVANRQKLKLPTSLLPREPYKIIVPRNDRTYRLTPLSLLAYRRAIEEECSSNISFRRGKLYRDGAETAFFHFRRNYYWILADNPASGPDSRHLGIVPEESIVGVVMNAN
>CP025931.1|AUR48889.1|2171498_2171762_-|CRISPR-associated-endoribonuclease-Cas2
MYIILVYDIGEKRVGKMLKLCRKYLNWIQNSVFEGEISEVKLLELKSRAAGIMEKEEDSLIIFSSRQERWLEKEIIGKERSATDIFL
>CP025931.1|AUR47987.1|2171761_2172778_-|CRISPR-associated-protein-Cas1
MKKTYYLFNPGELSRKDNTIRFVPIQEGENGQEQAGQARYIPVEGISDFYVFGSLRANSSLYNFLGSNDIAVHFFDYYENYTGSFMPRDFLLSGKMLLAQASAYKNKKKRLFLARKFIEGAASNMQKNLAYYNNRGKDMQPMMELIDKYSLRLKETTTIEALMGIEGNIRQAYYDAFNLIIDPFEMGVRSKQPPQNEVNALISFGNMMCYTLCLKAIHQSQLNPTISFLHTPGERRYSLCLDISEVFKPILVDRTIFKVMNKRIIQAKHFDKQLNKCILNPSGKKLFVQAFEERLSETIRHRKLNRSVSFRHLVKLECYKIAKDILGIEEYQPFKMYW
>CP025931.1|AUR48625.1|2172774_2173287_-|CRISPR-associated-protein-Cas4
MNTISGTHFNYHQVCRRKLWLFSAGITMEHTSDLVYEGKLIHETTYQQRPERYQELELDGIKIDFYDAKNRVVHEVKKSNKISPAHRLQLLYYLYVLERNGVLGATGILEYPTLRKKEEVILSDIDRERIREIEQEILQIISHEDCPPVIDSGICKNCSYYEFCFSGEEQ
>CP025931.1|AUR47304.1|2173306_2175610_-|CRISPR-associated-helicase-Cas3
MINKESPILAKPSGITLDVHAENVIQEGALLLKGLGCTKEKYFQTTAKQIVQRVELACKYHDIGKRNKIWQDACKKDYKAYLIWKKIHPNKSFEDYTIECREEAGKFLRQTHVRHEFYSIKGLLNNNPPPWLKIAIAAHHRKLSMKHEERWLSSDEDICSVWKDIRRLSNCFFDDRNSVLSDIVIKQYEFAGPRSLLQLADHRASAKEESKDIPDPIAFSYTFPEKWEKRPVQKLVEKHWRDELLLVRAPTGAGKTDAALLWASLQIKHRKADRLIIAMPTRFTTNALALNVSSTLSSTGLYHSSAWTQNFSSKIDNGEIALEQARYYHNQARLLQTPITVCTIDHLLSSLTLCDEEHQTITFALANACLVIDEADFYDQFTQANILVLLEVLKYWKVPILLMSASLPDNIVQEYRKIGYDIKHILEDTSDIERARFSLIEKRDVSEISQMQDLLQLCLDRGSAIIFANTVDRAQAYYQWFLENGHEEEVILYHSRYTETDKIEKEAQLLLRLGRSAWDNDRANGVAILTQIGEMSVNISADIMISDLCPIDRLTQRCGRLCRFSRKIGDLYIIRPMREGNLFPAPYYQNVGPSQKLEPNDALIKTDELLEKGMYSAANLVQLLNKVYANQTVFSTEASCNADRLREMFKANWLINPIEYLDEEIGSTNFWRARNIMPRCRIYIKRPLQSFRNYSDFRRWETDVAIDIPIYVIKKAMRMSDTVCSQVKVCIGKNDYTLIVINAKCYNNVRGLFFSKSVLEEPNFEFL
>CP025931.1|AUR47988.1|2175599_2176616_-|CRISPR-associated-protein-Cas7
METKKIAGVLVTMVAPFENHMANGGEKLFGNASSIKRRPDGRVYVSGQMQRHVLFSAIDRLNHLDKAKGTTFVSNGDGITNLIEIDLRADLGGFMHTNKGDYSDRRIAPLSVTPATALDTSSVGRDLLVRIRFDKSSDAKNQALATREYSEQDKMNMNFFLDITSVGVSKSFVYKDGLNLGTKYFKHITDDEKKRRVKLFLEATRIMNDYANQARNAVCGEPEKVLIVFDDRLSRKACRYYTAGEKEQANIIKELNECQVKYFIGDDTSDYSVADAYRDAINYLDKATFVDLAEGEEIMTFAEAFECKEKEPQGKKSKKGKDKATSAQNLFAEQQDDQ
>CP025931.1|AUR47529.1|2176626_2178126_-|CRISPR-associated-protein-Cas8c
MNTNHYYIRYGCAITLYDNHVSERERLTPKELRFSIEKAVSSFRIQAQEPFSPGSKARFSFVKRKDGNTKNGIFLSPHIVTKDMHAQKVWTKASKFLEIDYLGKDNEREGLLKKDNVSMSNIPISGEFLTFGEKDTGRGSAKISVEEQTYGLITTLTTLKPALQVGKDNFCIIPDIPLNQMVDFITLLDKMQITHLSGEAMLGNIDNKGIPHRPKIFRGNFPNSPKSDRMGAIALLGAIGEFAKHAEFSTLAQKVLDSLKGSTLYLITYANAIPFTFHHYIIDLAKEGKLHSIVDSLFYSRLYKKEKRVYGDTDYDRFDFFANRFLQSFNKAAFDDFFSSRVEYPNQIKILFQMFFTKMEKLKTDVIASAQVLGSWLNQVAYFAAKEEADSRISPGNIFEEKAKFLVMMESSIYAAKRGDALIAQILILAGRLSKNEAPKEALLFMEKTITGEIDLSVAKNLLIAYMRIRREEKQRDLNSVKNDDAIPSDINIDDLTNT
>CP025931.1|AUR48310.1|2178122_2178866_-|CRISPR-associated-protein-Cas5
MKYNMKNIDLSILGKDPDLSASIKLHIEPHAPISMVSELPGSYYKALLYPDKHILCGLFENVLGWHFSRKDREIITKEIKNIRKKAKKGYIPPTIRSIFIPLLSDFFELDSVRIVSTDSPFFYNDLWKRAFRRKDAGKIHFGGTQNIDYTLVMDKFRFMCENERALETEEKTDQKEEKFLRENIDRISFFYTTPTNREYLFFEGNYECVIKMDPQLVDLLSKTLPQQNMGYLGNSEGWVTLYLEEKS
>CP025931.1|AUR48408.1|2178862_2179528_-|CRISPR-associated-endoribonuclease-Cas6
MRIELSIKADDSLVSFSHQHLLVGTLQKWLGENDMHGKSISYSFSRLNGGKLVSELNSILFADWANMFVSAHDPELIRRMLAGIRQDPEMFKSLCVREVTVIEDPDMTDREIFFPASPILLKRWREDNGFDHIVYTDEAANALLTENLRKKLQAVGIDDPTATASFVPDKGKAKVMLIDYRGVKNKASWCPIRIIGNAETKLFAWNAGIGNSTGIGFGAIK
>CP025931.1|AUR47394.1|2180174_2182106_-|phosphoglycerol-transferase-Lipoteichoic-acid-synthase-1-arylsulfatase
MKTLFERGELLFRKRSGFCYVIGVFVLFLLYFLFQKVIFLLVYSGQLAGIGTSSGDIAAIFLHGLRHDAAVAAYLTVLPLLFAGINAIAGWGEKKIGRIQRQILKHYYTLISFFVGLIYTADLMLFGYWGFRLDATPLFYLRQPQEAMASATTPQLLISLLITVVFVCIPAFVLHRFHRRYFPTKVAAHPHIAGIWKPVVGGAFLFLLIRGGVGVATLNVGSVFHSPKQLHNQAAVNPVFSFLYTCMHSEEDYSNYQFLSEEDCIKAFEQLRLYGCSDGSEVRESASDSTERILSTDRPNIVLILLESFSANAVGCLGGTPGHTPCIDSLAQNGILFSQAFASSFRTDRGTVATLSGYPSQPNSSIIKYPNKVRNLPGIAASLRTVGYSTHHLYGGDADFTNVRSYLYATGYDEVTDVSSFPIKTRLSKWGTPDHISFPRLLDDCRRLEKEKKPYFYSFLTLSSHEPFDVPSQHHPDPYLNSVFYTDSCFGDYIRGMQQSPQWKNTLIITVSDHGYPYPADQAMPDQPGRYGIVMLWTGGAISRPIRFEEVVSQSDLPATLLAQLGLAHDEFVFSKDVFRRNSPHFAYFSFPGLVGLATSEGTTIYDFAGDKIVYGYEAPLADQRAIAAKVMLQSVMKDMLSR
>CP025931.1|AUR47269.1|2182109_2184653_-|inner-membrane-protein-unknown-function
MKENEKPTAAAGTVTTTDKTKPDWRKILPYAAVVLLFIALALAYFYPASFDGRVLFQGDVAGASGTAQDVRDWEAQTGEHSYWTNSLFGGMPMYQISPSYPSTHTLQTIQDVLTLRKPFYLLGTYAWMLFAMMGGFFLFLRSLRIRILPAVIGSIAWAFSSYFLILIMAGHIWKLTAMCFIPPTLAGMIWIYNGRWLAGGSVMAFFTALQVLANHVQMSYYFLFVMFFMVLAFLAEAIRTKRIRHFFLSSAVVVIAGLVGVAVNSTNLFHTYQYGKETMRGGSELTLKQSGALTDQVTHENKSGLDKAYITQWSYGIGETWSLLIPDIKGGSSGYLGYDEKVMETVNPSYAQAIARMNRYWGDQPFTAGPVYVGAFVLFLFVLGCFIVKGPVKWALLAATILSILLSWGHNMMWLTSFFIDHFPLYDKFRTVSSILVIAEFTIPALAVMALVEIIKEGKPLLKRERTAWVAATLLTLGASLLFALVPSLLGLLSGQEEAMFREAAGHPEAAAIKTTLVDVRSGILASDAWRSFGILAVCGILLWLFFQKRLKATALLVSLAVITLVDLWTVDKRYLNDEHFIDPELVSQRAAPLTEADKQILADKSLGYRVLNLTVDTYNDATTSRWHRSIGGYHAAKLQRYQDLIEHQLSKGNREVVNMLNTKYIIVPGENNRPSPMSNPDAYGPAWPAGSIRWVGNANEEMMALDSNRLTRDVAVVDERFSSESLKRLPALTDSTASISLKEYAPNRQVYEAVSTQPMLGIFSEIYYPHGWTATIDNQAVPIIRANYILRALEVPAGRHKIEFRFDPKSLHITEAIAKTALALLLLGIVWAIARPFFLRGKRPTA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
CP025931_2	2.1\|114710\|30\|CP025931\|PILER-CR,CRISPRCasFinder,CRT	114710-114739	30	CP025931.1	819979-820008	1.0
CP025931_5	5.1\|2110847\|38\|CP025931\|CRISPRCasFinder	2110847-2110884	38	CP025931.1	1568606-1568643	1.0
CP025931_7	7.3\|2133158\|41\|CP025931\|PILER-CR,CRISPRCasFinder,CRT	2133158-2133198	41	CP025931.1	63698-63738	1.0
CP025931_8	8.1\|2166972\|36\|CP025931\|CRISPRCasFinder,CRT	2166972-2167007	36	CP025931.1	2166906-2166941	1.0
CP025931_8	8.2\|2167038\|36\|CP025931\|CRISPRCasFinder,CRT	2167038-2167073	36	CP025931.1	2166906-2166941	1.0
CP025931_8	8.3\|2167104\|36\|CP025931\|CRISPRCasFinder,CRT	2167104-2167139	36	CP025931.1	2166906-2166941	1.0
CP025931_8	8.4\|2167170\|36\|CP025931\|CRISPRCasFinder,CRT	2167170-2167205	36	CP025931.1	2166906-2166941	1.0

1. spacer 2.1|114710|30|CP025931|PILER-CR,CRISPRCasFinder,CRT matches to position: 819979-820008, mismatch: 0, identity: 1.0

gatgtggctgtagatgcactcttccgcaaa	CRISPR spacer
gatgtggctgtagatgcactcttccgcaaa	Protospacer
******************************

2. spacer 5.1|2110847|38|CP025931|CRISPRCasFinder matches to position: 1568606-1568643, mismatch: 0, identity: 1.0

attactacgggaaagcccagcgaacgcattgccggaat	CRISPR spacer
attactacgggaaagcccagcgaacgcattgccggaat	Protospacer
**************************************

3. spacer 7.3|2133158|41|CP025931|PILER-CR,CRISPRCasFinder,CRT matches to position: 63698-63738, mismatch: 0, identity: 1.0

cgggagtgcgacaagatacttggctccggccgcacgattgg	CRISPR spacer
cgggagtgcgacaagatacttggctccggccgcacgattgg	Protospacer
*****************************************

4. spacer 8.1|2166972|36|CP025931|CRISPRCasFinder,CRT matches to position: 2166906-2166941, mismatch: 0, identity: 1.0

tgtcatatagatatgacatcttagatattggtacta	CRISPR spacer
tgtcatatagatatgacatcttagatattggtacta	Protospacer
************************************

5. spacer 8.2|2167038|36|CP025931|CRISPRCasFinder,CRT matches to position: 2166906-2166941, mismatch: 0, identity: 1.0

tgtcatatagatatgacatcttagatattggtacta	CRISPR spacer
tgtcatatagatatgacatcttagatattggtacta	Protospacer
************************************

6. spacer 8.3|2167104|36|CP025931|CRISPRCasFinder,CRT matches to position: 2166906-2166941, mismatch: 0, identity: 1.0

tgtcatatagatatgacatcttagatattggtacta	CRISPR spacer
tgtcatatagatatgacatcttagatattggtacta	Protospacer
************************************

7. spacer 8.4|2167170|36|CP025931|CRISPRCasFinder,CRT matches to position: 2166906-2166941, mismatch: 0, identity: 1.0

tgtcatatagatatgacatcttagatattggtacta	CRISPR spacer
tgtcatatagatatgacatcttagatattggtacta	Protospacer
************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP025931_4	4.1\|1372056\|29\|CP025931\|CRISPRCasFinder	1372056-1372084	29	NZ_CP024656	Bacillus cereus strain MLY1 plasmid pMLY1.2, complete sequence	41975-42003	7	0.759
CP025931_8	8.13\|2167765\|34\|CP025931\|CRISPRCasFinder,CRT,PILER-CR	2167765-2167798	34	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	714094-714127	7	0.794
CP025931_8	8.13\|2167765\|34\|CP025931\|CRISPRCasFinder,CRT,PILER-CR	2167765-2167798	34	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	714110-714143	7	0.794
CP025931_8	8.13\|2167765\|34\|CP025931\|CRISPRCasFinder,CRT,PILER-CR	2167765-2167798	34	NC_029073	Geobacillus virus E3, complete genome	39503-39536	7	0.794
CP025931_2	2.2\|114776\|30\|CP025931\|PILER-CR,CRISPRCasFinder,CRT	114776-114805	30	MN694560	Marine virus AFVG_250M172, complete genome	19299-19328	8	0.733
CP025931_8	8.60\|2170859\|35\|CP025931\|CRISPRCasFinder,CRT,PILER-CR	2170859-2170893	35	NC_009806	Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence	92086-92120	9	0.743
CP025931_8	8.63\|2171056\|35\|CP025931\|CRISPRCasFinder,CRT,PILER-CR	2171056-2171090	35	NZ_CP007231	Yersinia similis strain Y_sim_228 plasmid unnamed, complete sequence	29435-29469	9	0.743
CP025931_8	8.63\|2171056\|35\|CP025931\|CRISPRCasFinder,CRT,PILER-CR	2171056-2171090	35	NC_011759	Yersinia pseudotuberculosis pGDT4 plasmid	20547-20581	9	0.743

1. spacer 4.1|1372056|29|CP025931|CRISPRCasFinder matches to NZ_CP024656 (Bacillus cereus strain MLY1 plasmid pMLY1.2, complete sequence) position: , mismatch: 7, identity: 0.759

ggcaaagatgaaagcaaatggagggaaga	CRISPR spacer
taaatatatgaaagcaaatggatggaagg	Protospacer
 . * * *************** *****.

2. spacer 8.13|2167765|34|CP025931|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 7, identity: 0.794

taaataatcatttaattgtaacattttgtgaata-	CRISPR spacer
aaaataatgatttaattgtaaaattatat-agtat	Protospacer
 ******* ************ *** *.* *.**

3. spacer 8.13|2167765|34|CP025931|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 7, identity: 0.794

taaataatcatttaattgtaacattttgtgaata-	CRISPR spacer
aaaataatgatttaattgtaaaattatat-agtat	Protospacer
 ******* ************ *** *.* *.**

4. spacer 8.13|2167765|34|CP025931|CRISPRCasFinder,CRT,PILER-CR matches to NC_029073 (Geobacillus virus E3, complete genome) position: , mismatch: 7, identity: 0.794

taaataatc--atttaattgtaacattttgtgaata	CRISPR spacer
--gattatctgctttaattgttacattttgtaaata	Protospacer
  .** ***   ********* *********.****

5. spacer 2.2|114776|30|CP025931|PILER-CR,CRISPRCasFinder,CRT matches to MN694560 (Marine virus AFVG_250M172, complete genome) position: , mismatch: 8, identity: 0.733

gaagtggccaatgttcgataggctgctcag	CRISPR spacer
gaactggccaatgtttgataggccatgacg	Protospacer
*** ***********.*******...   *

6. spacer 8.60|2170859|35|CP025931|CRISPRCasFinder,CRT,PILER-CR matches to NC_009806 (Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence) position: , mismatch: 9, identity: 0.743

cctccgcccccagcccgctatcgacccccacctgc	CRISPR spacer
ccctggatccccgcccgctgtcgacccccacctcg	Protospacer
**.. * .*** *******.*************

7. spacer 8.63|2171056|35|CP025931|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007231 (Yersinia similis strain Y_sim_228 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

acttcgccgtccgcggtaatgtgaccaataccgac	CRISPR spacer
atatcgccgtacccggtaatgtgaccaacagtgtt	Protospacer
*. ******* * ***************.* .* .

8. spacer 8.63|2171056|35|CP025931|CRISPRCasFinder,CRT,PILER-CR matches to NC_011759 (Yersinia pseudotuberculosis pGDT4 plasmid) position: , mismatch: 9, identity: 0.743

acttcgccgtccgcggtaatgtgaccaataccgac	CRISPR spacer
atatcgccgtacccggtaatgtgaccaacaatgtt	Protospacer
*. ******* * ***************.* .* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

275898 : 361267

Ralstonia_phage(15.38%)

tRNA,transposase,protease,integrase

attL 337751:337767|attR 366995:367011

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR47896.1\|275898_276984_+\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	5.8e-20	28.4
AUR47584.1\|277909_279319_+\|protease	t9SS C-terminal target domain-containing protease	NA	NA	NA	NA
AUR48380.1\|279720_280407_+	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA
AUR48651.1\|280425_280911_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA
AUR47854.1\|281726_282857_+\|tRNA	queuine tRNA-ribosyltransferase	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.3e-78	43.7
AUR47911.1\|282873_283956_+	lipopolysaccharide export system permease	NA	NA	NA	NA
AUR48691.1\|283988_284450_+	tmRNA-binding protein SmpB	W5RAM5	Staphylococcus_phage	6.1e-27	44.7
AUR47330.1\|284489_286661_+	dipeptidyl aminopeptidase 4	NA	NA	NA	NA
AUR48184.1\|286764_287613_+	lipoyl synthase	NA	NA	NA	NA
AUR47322.1\|287865_290076_+	gingipain R2 hemagglutinin	NA	NA	NA	NA
AUR48493.1\|290656_291259_-	phosphoserine phosphatase	NA	NA	NA	NA
AUR48171.1\|291248_292109_-	decaprenyl-phosphate phosphoribosyltransferase	NA	NA	NA	NA
AUR48702.1\|292125_292581_-	endoribonuclease metalloprotein	NA	NA	NA	NA
AUR47757.1\|292616_293849_-	spore maturation protein A	NA	NA	NA	NA
AUR48555.1\|293868_294435_-	guanylate kinase	K4JYM5	Abalone_herpesvirus	1.8e-17	37.0
AUR48133.1\|294467_295358_-	protein that may play a role in stationary phase survival	NA	NA	NA	NA
AUR47213.1\|295449_298791_-	protein translocase subunit	NA	NA	NA	NA
AUR47479.1\|298884_300480_-	alkaline phosphatase	NA	NA	NA	NA
AUR47745.1\|300458_301706_-	hypothetical protein	NA	NA	NA	NA
AUR47224.1\|301736_304760_-	ATP-dependent helicase subunit B	NA	NA	NA	NA
AUR48334.1\|304735_305461_-\|protease	metal-dependent inner membrane protease abortive phage infection protein	NA	NA	NA	NA
AUR47469.1\|306139_307777_-	60 kDa chaperonin	A0A240F779	uncultured_virus	1.2e-189	64.7
AUR48879.1\|307815_308085_-	10 kDa chaperonin	A0A221S3C8	uncultured_virus	4.2e-20	56.3
AUR48102.1\|308301_309210_-\|tRNA	tRNA dimethylallyltransferase	NA	NA	NA	NA
AUR47530.1\|309206_310703_-	inosine-5'-monophosphate dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.6e-58	33.7
AUR47474.1\|311357_312977_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	5.3e-134	47.4
AUR47399.1\|313103_314987_+	membrane insertase	NA	NA	NA	NA
AUR47400.1\|315077_316961_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.5e-12	22.6
AUR47919.1\|316994_318068_+	carbamoyl-phosphate synthase small chain	NA	NA	NA	NA
AUR47215.1\|318086_321314_+	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA
AUR47388.1\|321508_323452_-	glutamine-dependent NAD(+) synthetase	NA	NA	NA	NA
AUR48185.1\|323561_324410_-	vancomycin B-type resistance protein	NA	NA	NA	NA
AUR47281.1\|325604_328088_+	tonB-dependent receptor putative ferric aerobactin receptor	NA	NA	NA	NA
AUR48468.1\|328268_328889_-	outer membrane protein	NA	NA	NA	NA
AUR48922.1\|328921_329137_-	putative periplasmic	NA	NA	NA	NA
AUR47549.1\|329217_330678_+	aminoacyl-histidine dipeptidase	NA	NA	NA	NA
AUR47598.1\|331594_332983_+	outer membrane protein TolC Type I secretion system	NA	NA	NA	NA
AUR47929.1\|333017_334079_+	multidrug resistance protein	NA	NA	NA	NA
AUR47219.1\|334075_337225_+	multidrug resistance protein	S5VTK5	Leptospira_phage	3.9e-101	26.0
AUR48869.1\|337221_337509_+	hypothetical protein	NA	NA	NA	NA
337751:337767	attL	NA	NA	NA	NA
AUR47897.1\|337940_339026_-\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	5.8e-20	28.4
AUR48393.1\|339267_339942_+\|integrase	integrase DNA breaking-rejoining enzyme	H7BUI8	unidentified_phage	6.4e-17	35.0
AUR48328.1\|340056_340788_-	abortive phage resistance protein AbiGi antitoxin	NA	NA	NA	NA
AUR47805.1\|342045_343227_+	ATPase component of energizing module of biotin ECF transporter	NA	NA	NA	NA
AUR47205.1\|343415_346997_+	pyruvate synthase pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
AUR47237.1\|348005_350828_-	lysyl endopeptidase	NA	NA	NA	NA
AUR48622.1\|351353_351872_-	Nucleoid-associated protein	NA	NA	NA	NA
AUR47672.1\|352562_353876_+	hypothetical protein	NA	NA	NA	NA
AUR48586.1\|354077_354623_+	hypothetical protein	NA	NA	NA	NA
AUR48209.1\|355155_355977_-	purine nucleoside phosphorylase 1	Q5YBA4	Grouper_iridovirus	7.5e-52	41.2
AUR47718.1\|355996_357271_-	5-methylthioadenosine/S-adenosylhomocysteine deaminase	NA	NA	NA	NA
AUR47623.1\|357345_358701_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
AUR47454.1\|358917_360594_+	aspartate/alanine antiporter cobalt transporter	NA	NA	NA	NA
AUR48772.1\|360871_361267_-\|integrase	integrase	NA	NA	NA	NA
366995:367011	attR	NA	NA	NA	NA

DBSCAN-SWA_2

628107 : 685056

Bacillus_phage(16.67%)

bacteriocin,transposase,integrase

attL 610650:610665|attR 692479:692494

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
610650:610665	attL	NA	NA	NA	NA
AUR47688.1\|628107_629406_-\|integrase	integrase	S0A3I4	Cellulophaga_phage	1.2e-19	28.7
AUR47701.1\|629886_631179_+\|integrase	integrase	H7BUI8	unidentified_phage	2.9e-34	33.8
AUR48704.1\|631175_631631_+	hypothetical protein	NA	NA	NA	NA
AUR48884.1\|632341_632611_+	DNA-binding helix-turn-helix regulator	NA	NA	NA	NA
AUR48858.1\|632631_632937_+	DNA-binding helix-turn-helix regulator	NA	NA	NA	NA
AUR48667.1\|632933_633410_+	hypothetical protein	NA	NA	NA	NA
AUR48232.1\|634016_634820_-\|integrase	integrase	A0A0H4TI16	Erysipelothrix_phage	3.1e-18	26.2
AUR47727.1\|634914_636183_+	restriction endonuclease subunit S	NA	NA	NA	NA
AUR47490.1\|636177_637740_-	type I restriction endonuclease	E3T4D5	Cafeteria_roenbergensis_virus	2.9e-12	26.1
AUR48659.1\|637736_638216_-	death-on-curing family protein	NA	NA	NA	NA
AUR47984.1\|638208_639225_-	DNA-binding protein	A0A0S2SXZ1	Bacillus_phage	1.7e-13	28.4
AUR47522.1\|639236_640745_-	type I restriction endonuclease subunit M	A0A2H4UVW8	Bodo_saltans_virus	8.4e-17	24.6
AUR47289.1\|640748_643136_-	DEAD/DEAH box helicase	A0A097BY72	Enterococcus_phage	1.2e-20	27.3
AUR48927.1\|643205_643409_-	transcriptional regulator	NA	NA	NA	NA
AUR47209.1\|643668_647082_-	Adenine-specific DNA methylase	A0A248SL14	Klebsiella_phage	1.2e-90	30.9
AUR47311.1\|647081_649361_-	DNA methylase	NA	NA	NA	NA
AUR47346.1\|649366_651460_-	DNA topoisomerase III	A0A076FM50	Aureococcus_anophage	1.1e-11	22.6
AUR47583.1\|651548_652958_-	hypothetical protein	NA	NA	NA	NA
AUR48000.1\|653811_654822_+	ATP-GRASP peptide maturase grasp-with-spasm system	S5VKI3	Leptospira_phage	7.3e-17	29.8
AUR47734.1\|654875_656135_+	SPASM domain peptide maturase grasp-with-spasm system	NA	NA	NA	NA
AUR47295.1\|656147_658493_+	porin	NA	NA	NA	NA
AUR47321.1\|658523_660737_+\|bacteriocin	ABC-type bacteriocin/lantibiotic exporter	W8CYL7	Bacillus_phage	1.4e-31	27.4
AUR48647.1\|660738_661227_+	tellurite-resistance/dicarboxylate transporter	NA	NA	NA	NA
AUR48508.1\|661419_662016_-	tonB-dependent receptor	NA	NA	NA	NA
AUR48841.1\|661975_662302_-	porin	NA	NA	NA	NA
AUR47580.1\|662276_663692_-	peptidase	NA	NA	NA	NA
AUR47589.1\|663778_665179_-	anaerobic sulfatase-maturase	NA	NA	NA	NA
AUR47378.1\|667188_669174_-	conjugative transposon protein TraG	NA	NA	NA	NA
AUR47715.1\|669175_670456_-	relaxase/mobilization nuclease	NA	NA	NA	NA
AUR48769.1\|670440_670842_-	mobilization protein	NA	NA	NA	NA
AUR48226.1\|671472_672282_+	conjugative transposon protein TraA chromosome-partitioning ATPase	NA	NA	NA	NA
AUR48783.1\|672268_672655_+	conjugal transfer protein TraC	NA	NA	NA	NA
AUR48360.1\|672659_673364_+	conjugative transposon protein TraD	NA	NA	NA	NA
AUR48860.1\|673552_673855_+	conjugative transposon protein TraE	NA	NA	NA	NA
AUR48831.1\|673858_674194_+	conjugative transposon protein TraF	NA	NA	NA	NA
AUR47273.1\|674190_676716_+	conjugative transposon protein TraG	NA	NA	NA	NA
AUR48453.1\|676743_677373_+	conjugative transposon protein TraI	NA	NA	NA	NA
AUR47954.1\|677495_678536_+	conjugative transposon protein TraJ	NA	NA	NA	NA
AUR48462.1\|678547_679171_+	conjugative transposon protein TraK	NA	NA	NA	NA
AUR48870.1\|679167_679455_+	inner membrane protein	NA	NA	NA	NA
AUR47619.1\|679444_680806_+	conjugative transposon protein TraM	NA	NA	NA	NA
AUR47967.1\|680828_681854_+	conjugative transposon protein TraN	NA	NA	NA	NA
AUR48536.1\|681847_682426_+	conjugative transposon protein TraO	NA	NA	NA	NA
AUR48681.1\|682435_682903_+	conjugative transposon protein TraQ	NA	NA	NA	NA
AUR47898.1\|683419_684505_+\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	9.9e-20	28.1
AUR48801.1\|684678_685056_+\|integrase	integrase-like protein	NA	NA	NA	NA
692479:692494	attR	NA	NA	NA	NA

DBSCAN-SWA_3

691366 : 756784

Ralstonia_phage(25.0%)

transposase,protease,integrase

attL 699405:699420|attR 742555:742570

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR47916.1\|691366_692446_+\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	1.0e-16	26.5
AUR48686.1\|692606_693071_+	conjugative transposon protein TraQ	NA	NA	NA	NA
AUR48429.1\|693101_693749_-	Bacterial PH domain protein	NA	NA	NA	NA
AUR48682.1\|693783_694251_-	Bacterial PH domain protein	A0A2H5BNL9	Klebsiella_phage	5.8e-09	31.1
AUR47629.1\|694355_695708_-\|transposase	transposase IS4 family	NA	NA	NA	NA
AUR48626.1\|695821_696334_-	hypothetical protein	NA	NA	NA	NA
AUR48472.1\|696374_696989_-	27-O-demethylrifamycin SV methyltransferase	NA	NA	NA	NA
AUR48547.1\|697003_697576_-	Protein-S-isoprenylcysteine O-methyltransferase	NA	NA	NA	NA
AUR48438.1\|697572_698217_-	inner membrane protein	NA	NA	NA	NA
AUR48872.1\|698828_699110_-	hypothetical protein	NA	NA	NA	NA
AUR48913.1\|699132_699360_-	5-hydroxytryptamine receptor 2	NA	NA	NA	NA
AUR48617.1\|699372_699894_-	hypothetical protein	NA	NA	NA	NA
699405:699420	attL	NA	NA	NA	NA
AUR48809.1\|699900_700260_-	hypothetical protein	NA	NA	NA	NA
AUR48696.1\|700617_701076_-	hypothetical protein	NA	NA	NA	NA
AUR48606.1\|701102_701636_-	DNA-binding protein	NA	NA	NA	NA
AUR47758.1\|701671_702904_-\|integrase	bacteriophage integrase	H7BUI8	unidentified_phage	4.4e-32	38.1
AUR48402.1\|703516_704185_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
AUR48931.1\|704181_704376_-	exodeoxyribonuclease 7 small subunit	NA	NA	NA	NA
AUR47406.1\|704710_706573_+	two-component sensor histidine kinase	NA	NA	NA	NA
AUR48386.1\|706585_707269_+	response regulator protein	NA	NA	NA	NA
AUR48381.1\|707454_708141_+	tetratricopeptide repeat-containing protein	NA	NA	NA	NA
AUR48652.1\|708232_708718_+	67-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	9.9e-28	42.9
AUR47272.1\|708858_711390_+\|protease	thiol protease hemagglutinin precursor	NA	NA	NA	NA
AUR47457.1\|712515_714186_+	peptidylarginine deiminase	NA	NA	NA	NA
AUR47528.1\|714440_715943_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
AUR48944.1\|716278_716449_+	ferredoxin	NA	NA	NA	NA
AUR47417.1\|716885_718694_-	DNA polymerase III subunit tau	A0A1U9WR94	Streptococcus_virus	6.1e-46	39.1
AUR47466.1\|718816_720463_-	fumarate hydratase	NA	NA	NA	NA
AUR48909.1\|720531_720762_-	hypothetical protein	NA	NA	NA	NA
AUR48063.1\|720758_721700_-	nitronate monooxygenase	NA	NA	NA	NA
AUR47259.1\|722132_724736_-	ferric enterobactin receptor	NA	NA	NA	NA
AUR47452.1\|726648_728328_+	aspartate/alanine antiporter cobalt transporter	NA	NA	NA	NA
AUR48618.1\|728417_728936_+	putative Met_synt_B12 super family	NA	NA	NA	NA
AUR48044.1\|728932_729898_-	cadmium cobalt and zinc/H(+)-K(+) antiporter	NA	NA	NA	NA
AUR48308.1\|729953_730697_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AUR47235.1\|731161_734017_+	LPS-assembly organic solvent tolerance protein	NA	NA	NA	NA
AUR48336.1\|734043_734766_+\|protease	rhomboid protease membrane protein of glp regulon	NA	NA	NA	NA
AUR48096.1\|734749_735664_+	GlpG membrane protein of glp regulon	NA	NA	NA	NA
AUR47844.1\|735660_736806_+	endonuclease	NA	NA	NA	NA
AUR47605.1\|737058_738438_+	tryptophanase	NA	NA	NA	NA
AUR47899.1\|739516_740602_+\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	5.8e-20	28.1
AUR47517.1\|741524_743042_+	phosphoribosylaminoimidazolecarboxamide formyltransferase	Q58MG4	Prochlorococcus_phage	5.1e-54	41.6
742555:742570	attR	NA	NA	NA	NA
AUR47976.1\|743144_744164_+	rod shape-determining protein	NA	NA	NA	NA
AUR48139.1\|744200_745088_+	cell shape-determining protein	NA	NA	NA	NA
AUR48619.1\|745087_745606_+	rod shape-determining protein	NA	NA	NA	NA
AUR47405.1\|745598_747464_+	penicillin-binding protein 2	NA	NA	NA	NA
AUR47553.1\|747453_748911_+	rod shape-determining protein	NA	NA	NA	NA
AUR47777.1\|748938_750150_-	hypothetical protein	NA	NA	NA	NA
AUR48697.1\|750587_751046_+	Nucleoid-associated protein	NA	NA	NA	NA
AUR48352.1\|751110_751821_+	hypothetical protein	NA	NA	NA	NA
AUR48087.1\|751857_752784_+	outer membrane hypothetical protein	NA	NA	NA	NA
AUR47264.1\|752968_755548_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	4.2e-109	33.7
AUR47781.1\|755581_756784_+\|protease	Beta-barrel assembly-enhancing protease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: CP025931.1|AUR48759.1|1086440_1086854_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP025931.1|AUR48759.1|1086440_1086854_+|hypothetical-protein

1086440_1086854_+

137 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5815602836879432	1	1.0

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025931

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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