CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP025930	Porphyromonas gingivalis ATCC 33277 chromosome, complete genome	11 crisprs	DEDDh,cas13b,Csx27,PD-DExK,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	1	21	8	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP025930_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025930_1

110920-111019

Orphan

Consensus_repeat	Method
GGTTTCTAAGGCTCTATATCTTTTGACGTTGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025930_1

>merge|CP025930|1|110920-111019|CRISPRCasFinder
GGTTTCTAAGGCTCTATATCTTTTGACGTTGTTAGGCTTCCGTCTCGGATCGTGCTATACGTCCGATGGTTTCTAAGGCTCTATATCTTTTGACGTTGTT

>CP025930|1|1|110920-111019|CRISPRCasFinder
GGTTTCTAAGGCTCTATATCTTTTGACGTTGTT	AGGCTTCCGTCTCGGATCGTGCTATACGTCCGAT
GGTTTCTAAGGCTCTATATCTTTTGACGTTGTT

Protein	Signature genes	Signature genes Name	Protein_function
CP025930.1\|AUR49539.1\|118552_119752_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-B	unknown	unknown	gnl\|CDD\|130992
CP025930.1\|AUR49922.1\|107734_108622_+\|14-dihydroxy-2-naphthoate-octaprenyltransferase	unknown	unknown	gnl\|CDD\|235695
CP025930.1\|AUR49500.1\|121817_123056_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-F	unknown	unknown	gnl\|CDD\|235481
CP025930.1\|AUR50111.1\|119775_120510_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-C	unknown	unknown	gnl\|CDD\|273886
CP025930.1\|AUR49470.1\|103246_104521_-\|pcfJ-like-protein-related-to-phage	unknown	unknown	gnl\|CDD\|379539
CP025930.1\|AUR49428.1\|109128_110445_+\|regulatory-protein	unknown	unknown	gnl\|CDD\|320700
CP025930.1\|AUR49647.1\|111345_112431_-\|transposase-in-ISPg8	unknown	unknown	gnl\|CDD\|377531
CP025930.1\|AUR49938.1\|126290_127166_+\|outer-membrane-lipoprotein-Omp28	unknown	unknown	gnl\|CDD\|378673
CP025930.1\|AUR50443.1\|123987_124470_+\|thioredoxin	unknown	unknown	gnl\|CDD\|239264
CP025930.1\|AUR50262.1\|121184_121799_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-E	unknown	unknown	gnl\|CDD\|235074
CP025930.1\|AUR50713.1\|105518_105737_-\|hypothetical-protein	unknown	unknown	unknown
CP025930.1\|AUR50541.1\|105089_105506_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379444
CP025930.1\|AUR50242.1\|120515_121145_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-D	unknown	unknown	gnl\|CDD\|236457
CP025930.1\|AUR49194.1\|124525_126271_+\|hypothetical-protein	unknown	unknown	unknown
CP025930.1\|AUR49592.1\|106596_107745_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
CP025930.1\|AUR50390.1\|104537_105068_-\|antirestriction-protein	unknown	unknown	gnl\|CDD\|377800
CP025930.1\|AUR50687.1\|102965_103220_-\|hypothetical-protein	unknown	unknown	unknown
CP025930.1\|AUR49383.1\|117166_118522_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-A	unknown	unknown	gnl\|CDD\|273885
CP025930.1\|AUR50700.1\|102730_102961_-\|hypothetical-protein	unknown	unknown	unknown
CP025930.1\|AUR50578.1\|108713_109094_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|367747

Protein	Function_ID	Function_description	E-value
CP025930.1\|AUR49539.1\|118552_119752_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-B	gnl\|CDD\|130992	TIGR01937, Na+-translocating_NADH-quinone_reductase_subunit_B, NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit. This model represents the NqrB subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump. [Transport and binding proteins, Cations and iron carrying compounds].	0
CP025930.1\|AUR50242.1\|120515_121145_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-D	gnl\|CDD\|236457	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated.	1.9856e-113
CP025930.1\|AUR49500.1\|121817_123056_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-F	gnl\|CDD\|235481	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional.	0
CP025930.1\|AUR50111.1\|119775_120510_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-C	gnl\|CDD\|273886	TIGR01938, Na+-translocating_NADH-quinone_reductase_subunit_C, NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit. This model represents the NqrC subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump. [Transport and binding proteins, Cations and iron carrying compounds].	3.15836e-108
CP025930.1\|AUR49470.1\|103246_104521_-\|pcfJ-like-protein-related-to-phage	gnl\|CDD\|379539	pfam14284, PcfJ, PcfJ-like protein. The PcfJ-like protein family includes the E. faecalis PcfJ protein, which is functionally uncharacterized. It is found in bacteria and viruses, and is typically between 159 and 170 amino acids in length. There is a conserved HCV sequence motif.	2.31019e-45
CP025930.1\|AUR49428.1\|109128_110445_+\|regulatory-protein	gnl\|CDD\|320700	cd07341, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase. This family contains peptidase M56, which includes zinc metalloprotease domain in MecR1 as well as BlaR1. MecR1 is a transmembrane beta-lactam sensor/signal transducer protein that regulates the expression of an altered penicillin-binding protein PBP2a, which resists inactivation by beta-lactam antibiotics, in methicillin-resistant Staphylococcus aureus (MRSA). BlaR1 regulates the inducible expression of a class A beta-lactamase that hydrolytically destroys certain ?-lactam antibiotics in MRSA. Both, MecR1 and BlaR1, are transmembrane proteins that consist of four transmembrane helices, a cytoplasmic zinc protease domain, and the soluble C-terminal extracellular sensor domain, and are highly similar in sequence and function. The signal for protein expression is transmitted by site-specific proteolytic cleavage of both the transducer, which auto-activates, and the repressor, which is inactivated, unblocking gene transcription. All members contain the zinc metalloprotease motif (HEXXH). Homologs of this peptidase domain are also found in a number of other bacterial genome sequences, most of which are as yet uncharacterized.	1.10325e-24
CP025930.1\|AUR49647.1\|111345_112431_-\|transposase-in-ISPg8	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	1.80824e-23
CP025930.1\|AUR49938.1\|126290_127166_+\|outer-membrane-lipoprotein-Omp28	gnl\|CDD\|378673	pfam11551, Omp28, Outer membrane protein Omp28. Omp28 is a 28-kDa outer membrane protein from Porphyromonas gingivalis. Omp28 is thought to be a surface adhesion/receptor protein. Omp28 is expressed in a wide distribution of P.gingivalis strains.	6.10235e-25
CP025930.1\|AUR50262.1\|121184_121799_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-E	gnl\|CDD\|235074	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional.	1.25306e-107
CP025930.1\|AUR50443.1\|123987_124470_+\|thioredoxin	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	2.39727e-30
CP025930.1\|AUR50541.1\|105089_105506_-\|hypothetical-protein	gnl\|CDD\|379444	pfam14058, PcfK, PcfK-like protein. The PcfK-like protein family includes the Enterococcus faecalis PcfK protein, which is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 137 and 257 amino acids in length. There are two completely conserved residues (D and L) that may be functionally important.	1.42312e-39
CP025930.1\|AUR49592.1\|106596_107745_+\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	5.76555e-165
CP025930.1\|AUR50390.1\|104537_105068_-\|antirestriction-protein	gnl\|CDD\|377800	pfam07275, ArdA, Antirestriction protein (ArdA). This family consists of several bacterial antirestriction (ArdA) proteins. ArdA functions in bacterial conjugation to allow an unmodified plasmid to evade restriction in the recipient bacterium and yet acquire cognate modification.	1.69094e-24
CP025930.1\|AUR49922.1\|107734_108622_+\|14-dihydroxy-2-naphthoate-octaprenyltransferase	gnl\|CDD\|235695	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated.	6.02978e-75
CP025930.1\|AUR49383.1\|117166_118522_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-A	gnl\|CDD\|273885	TIGR01936, Na+-translocating_NADH-quinone_reductase_subunit_A, NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit. This model represents the NqrA subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump. [Transport and binding proteins, Cations and iron carrying compounds].	0
CP025930.1\|AUR50578.1\|108713_109094_+\|transcriptional-regulator	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	4.38088e-28

>CP025930.1|AUR49428.1|109128_110445_+|regulatory-protein
MTYTLVLYMAVASIGLALFWIFERLMIHGNTHCRLRRAYYLGGFVSVVVLPFLGYFLPSWPSLFIQNRSVGMEILRSIEIVLPEALVRTAGADAIPAVSPLLRGLFLAWLLGIGVLLIRFGIRLRSLLCLICGAERAEIEGVPVYFAPRVRMPFSFCGRIYLPTDLRSYPSVRNVLIHEQEHTRATHFVDLLIAEVACMLFWFNPFAWALKRDMQRNLEFLADRAVLLRGVSRREYQYELLGFTLEVAAGPLCSSYNINDLKERIRMMNKTKSNRAAGAKYLVALPLAALMLLSGKWLWAGNAVSEVREVVATVASDPAPLSDAPDISLQQDEDPVCSELDTPPSFPGGISKLMHFLSKNLKYPEQSAKNGIEGKVVVSFVVEKDGRLTNIQIEKSVAPELDAEAIRVISAMPKWNPGKQKGKTVRTSVAQPVRFRLK
>CP025930.1|AUR50578.1|108713_109094_+|transcriptional-regulator
MPKEIERLTTIEEDTMNIIWQLGTCNIRQVLAEVPEPKPPYTTLASVFKNLERKHYIKPFREGKTYHYRICISREEYATRTMHRMVDNYFTGSYKHLVQFFAAGSDISVKDLREVIDMIEKGEESE
>CP025930.1|AUR49922.1|107734_108622_+|14-dihydroxy-2-naphthoate-octaprenyltransferase
MSNNGSPPRLKAWLALPRPHTLPASVSPVVVAIAYAIADGNFRWPQAALALIVAVSAQTVSNIANDWFDYKKGADTDQRVGFESGISKGWLSERQVLAALFSFLFLLGLSGFLLCAISNWWLLVVGVVVAIGALSYSAGPYPLAYHGLGEIAVFIFFGLIPVLFTYYVQAESFPSDLWHLGAAMGFAGVNILIVNNYRDYEEDRKSGKRTILVKKGRDLGPKLYLACGLLSMMVLYPFFSAGGLLLLLLYLAFFMTNYRRLLREEGTALNALLVRTAKALSLLAFVAIAMLFLAR
>CP025930.1|AUR49592.1|106596_107745_+|diaminopimelate-decarboxylase
MKTPFYFYDLTLLERTLSALARSAGRHDVAIHYALKANNHPRILQTIGAAGFGADCVSGWEIEAAIEAGFPASDIFFAGVGKSDEEILLALEARIGAFVVESVPELLNIERLAGSKNDIAPILLRLNPEVDAHTHSHITTGLAENKFGLLPEDAFALMPHLLQSGSLVWRGLHFHIGSQIRSAKVFEELCEKTNRILASFRTAGYSPDIIDMGGGLGINYDEPEAEPIPDFATYIERYRRMIETGEARLHIEPGRSVVAQCGSLITQVLYIKEGKAKKFAIVDAGMTDLVRPALYEAHHQIRLVQPGEWTMRATSPSAALTEKYDVVGPICESSDVFERELLMPELKRGDYLAIRSAGAYGAVMASSYNMRPLPGSLFSDEQ
>CP025930.1|AUR50713.1|105518_105737_-|hypothetical-protein
MKRRSKTVAQQCRYYEVDNIFEYMVSVYLNGNISAFGELYKELNRKDRKEFIFYLFSEVEPIHIQEIILETI
>CP025930.1|AUR50541.1|105089_105506_-|hypothetical-protein
MKGTEHFKDVIQNYLETRASYDELFAESFRKENKNIDECITYILTEVQRMGCAGLSDEEVYSLAVHYYDEDNIEVGKYINCQVVVNHTIELTEEEKAEARKKAIERYQAEEYRKLTAKKPKLEKQVEQQIAQPSLFEF
>CP025930.1|AUR50390.1|104537_105068_-|antirestriction-protein
MEATDLNEARIYVGTYAKYNNGSLQGEWVELSDFYDLDGFMERCAGIHEDEEEPEYMFQAWEEIPDGLIDEGHLEENFFELRDELDRLNDTEKEAFWIWVEGNNIQLTQDAYSLVKSFQSDYIGSYASREDFAEELAKVENDLPDFALIYFDFSKYANDLFCTDFWYKDGYVFRNN
>CP025930.1|AUR49470.1|103246_104521_-|pcfJ-like-protein-related-to-phage
MKPRNKFEKAVLAESKHLRPITKTQSKWAFRECIDHFAYRLPKGRTTCMDCGHSWTIEKTTEHCTCPHCRAKLQVRTTFERKIRQKQYFTILTTCGEYQVLRMFLLSVEMEKGCKASSYTIEIGQYWWNAQGRKTIVAVQRVLGKYIDTFSYCSPMAVRNDNEAYHHISYSPIYPKFKATEALRRNGFKNDFHDIAPTVLIPALLSDSRAETLIKAGRTEHLKYFLDNSRAFDACWQSYKVANRNGYDIEDISIWCDYVDMLRRLGKDIHSPKYVCHTDLHREHDRRQHELRRQREKEEKEKKRKKAMEDEERFKELKSKFFGIRFTDGAIQVHVLESVQEHLDEGVAMHHCVFDNAYYLKENSLILSATIEGRRIETIEVSLDTLKVVQSRGVCNKNTEYHEQIVSLVNANRKLIRQRMRATA
>CP025930.1|AUR50687.1|102965_103220_-|hypothetical-protein
MKAEIESIVCNWADEIPYILVRIVNAITLSANEEELRAAVKRIAEETELDKFFAYGYGAHHFWLTHRRLSNGEPKEHRLLKVEF
>CP025930.1|AUR50700.1|102730_102961_-|hypothetical-protein
MKKRVYRVRTQYIFEGVFEVVAESREEARQKVIQNCGMVMGGNIHSTLPDEEINWAFSTHPEVITRRITVHEEQTE
>CP025930.1|AUR49647.1|111345_112431_-|transposase-in-ISPg8
MAYQFKNTDEHVTFADALLSKRYRKAQNDFLNQVDRLIDWRPIRTLINKKYTKRQNAIGAPAYDVILLFKMLLLETWYNLSDCALEERINDSITFSRFLGLKMEEVSPDHSTISRFRSALTELGLMDKLLAQFNKQLSRHHISVREGVLVDASLVETPHKPNGTITIEVADDREDNRSEEEKEAEEDYQKQVVRQRKGTDEEARWVYKQKRYHYGYKKHCLTNVQGIVQKVITTAANRSDTKEFIPLLQGANIPQGTAVLADKGYACGENRSYLQTHHLQDGIMHKAQRNRALTEEEKQRNKAIGPIRSTIERTFGSIRRWFHGGRCRYRGLAKTHTQNVLESIAFNLYRTPGIIMSSSVG
>CP025930.1|AUR49383.1|117166_118522_+|Na(+)-translocating-NADH-quinone-reductase-subunit-A
MAKVIKTKKGLALNLKGKPLPEMLAEPAQSPTYAVVPDDFEGVIPKVTARPGDKVRAGSALMHHKAYPEMKFTSPVSGEVIAVNRGAKRKVLSIEVKPDGLNEYESFPVGDPSALSAEQIKELLLSSGMWGFIKQRPYDIVATPDIAPRDIYITANFTAPLAPDFDFIVRGEERALQTAIDALAKLTAGKVYVGLKSGSALNLHNAEIVQMQGPHPAGNVGVLINHTKPINRGETVWTLKATDLIVIGRFLLTGKADFTRMIAMTGSDAAAHGYVRIMPGCNVFASFPGRLTIKESHERVIDGNVLTGKKLCEKEPFLSARCDQITVIPEGDDVDELFGWAAPRLDQYSMSRAYFSWLQGKNKEYVLDARIKGGERAMIMSNEYDRVFPMDIYPEYLLKAIIAFDIDKMEDLGIYEVAPEDFATCEFVDTSKIELQRIVREGLDMLYKEMN
>CP025930.1|AUR49539.1|118552_119752_+|Na(+)-translocating-NADH-quinone-reductase-subunit-B
MKALRNQLNKLKPHFEEGGKLHGLHSVFDGFETFLFVPNRTSQHGVHVHDAIDSKRTMIVVCMALLPALLFGMYNVGVQHYMAIDAPVVFWPAFLFGLLAVLPKLIVSYAVGLGIEFAVAQYRKEEIQEGFLVSGLLIPMIVPVDTPLWMIAVATAFAVVFAKEVFGGTGRNIFNVALVTRAFLFFAYPAAMSGDQVFVRTADTFGLGAGTVADGFSGATPLGQIATAGAKMPEIHNVAGDPSSLMDAFLGFIPGSIGETSTLAILIGAVLLIWTGIASWKIMLSGLVGASAMALVFNAIGTTAAMQITPLMHIVYGGFAFGLVFMATDPVTSARTEKGKWIFGFFVGLMAVFIRVLNPGYPEGMMLAVLLMNVFAPLIDYFVVDSNIKARKARMLKKS
>CP025930.1|AUR50111.1|119775_120510_+|Na(+)-translocating-NADH-quinone-reductase-subunit-C
MNRDKNSYTILYASVMVIVVAVLLAYVSQSLGDRQRDNEKIDKMQQILRSVNAGIEDKGKVIARYTDVIKQELLINQDGTVAKTFEGEQLAQNEAFTLNTRNAFKSAANDPSISLPLYIAEIEGQKKYIVPMNGAGLWGPIWGYIALNEDCNTIFGADFSHEGETPGLGAEITRSEFSGQFIGKEIFKEGEFRSVAVVKKGQKAEGKDYVDGISGGTLTSDGVNEMLISSLRPYALYLMNNVKK
>CP025930.1|AUR50242.1|120515_121145_+|Na(+)-translocating-NADH-quinone-reductase-subunit-D
MSLWNKKNKEILLGPLSSNNPVIVQMLGICSALAVTAKLQPAIVMALSVTAVIAFANVIISLLRNTIPGRIRIIVQLVVVAALVTIVSQVLKAFAYDVNKQLSVFVGLIITNCILMGRLEAFALANRPWESFLDGIGNGLGYGWVLVIIAFFRELLGSGTLLDIKVISKSFYESGYVNNGLMILPPMALITVAVVIWVHRARNKDLQEN
>CP025930.1|AUR50262.1|121184_121799_+|Na(+)-translocating-NADH-quinone-reductase-subunit-E
MDYISMFVRSIFVDNMVFAYYLGMCSFLAVSKNVKTSIGLGAAVTFILVCTLPINYLLQNYIFKAGALSWLGSQYAEVDLSFLSLIIFIAVIASFTQLVEMVVERFSPSLYASLGIFLPLIAVNCAILGGSLFMQQREFINVGMATVYGFGSGIGWMLAIVGMAAIREKLAYSNVPKPLRGLGITFIITGLMGIAFLSFSGVKL
>CP025930.1|AUR49500.1|121817_123056_+|Na(+)-translocating-NADH-quinone-reductase-subunit-F
MSTVIIASAVVFLLLTLILVVALLYAKSKLVPSGNVTITVNDERKMEVPLGGTLLNTLQNQGVFLSSACGGGGSCGQCRCRVVEGGGEILPTEKGFFSRKEQKDHWRLSCQTKVKEDLSIVIPEEVFGVKEWECEVLSNKNVSTFIKEFVVKLPEGETMNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKMDAWSLTCKNEEETVRAYSMANYPAEGNIITLNVRIATPPFDRAANKWKAGVKPGISSSYIFSLKPGDKVMMSGPYGDFHIQDTDAEMLYIGGGAGMAPLRAQILHLFRTLKTGRKVSYWYGARSKNEIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGFIHQVIYDNYLKDHDAPEDIEYYMCGPGPMANAVKGMLENLGVPRNMLFFDDFG
>CP025930.1|AUR50443.1|123987_124470_+|thioredoxin
MKCFFIALIGLLFSLNTYAQLPAVSLKNIEGKTVQTNKLENAGKPMIISFFATNCKPCLRELKAIQDVYADWQDETGVRLIAVSIDEGQNAQKVKPLADGNGWEYEVLLDSNGDFKRAMNVSLIPAVFIVDGNGKVVYNHTGYTEGGEAELIKKVRELMK
>CP025930.1|AUR49194.1|124525_126271_+|hypothetical-protein
MIRKLILLLALMPVASVAFAAPTDSTESKDNRILTSMQSSSLNRDDAPDKWQPMHANFSIQSDMLLSTAQKSKNTWFGNSYIMGIIKNNYLEFGARFEDLYKPLPGHEPEMGRGVPHMYVKGSYHWAELTMGDFYDQFGSGMVFRTYEERNLGIDNAVRGGRIVLTPFDGVRVKGIAGQQRNYFDRTGKVFNSGRGYLLGSDLELNVERWSSAMRDNDYHLAIGGSFVSKYEADEDIFVGVGEDRKRLNLPLNVPIMGLRTNFQKGGLALYAEYGYKYNDPSADNDYIYHDGQAALLSASYSKKGMSVLLQAKRCENFAFRSKRSAQLTPLMINYMPAFTQAHTYTLAAIYPYATQPQGEWAFQGELRYNFARRTALGGRYGTGLRINVSHVRGLDKKMLKENPDELIGTDGYTVSFFGMGDLYYSDIDVEITKKLSPGFNFTLTYLNQIYNNKVLHGAAGEKPEKIYANIFVYDGKYKLSNKVALRTELQYLHTKQDQGDWIYGMAELSILPSLMLSLSEQYNIGETKKHYVMGSVTYTHGAHRVAFSAGKTRAGMNCSGGVCRVVPETQGFYLSYSTNL
>CP025930.1|AUR49938.1|126290_127166_+|outer-membrane-lipoprotein-Omp28
MKKLFLSLTSLVMVFAVASCDIIDKDQTLLPAPTNVTPDNPDDNPSEIDITQTHTEKYVLAEEFTGQKCLYCPKGHRKLAALKEQYGKRLTVVGIHAGPASLVPPLFRTEAGDAYYSKFANNTSSLPALMVSRKKFGSSYVYDKSYKTWDVPIAEQMEQKAKMNIFAVAEYTDTQKIKVTVKGKVLEGNTLPKSMVQVYLLEDKLIAPQADGNTTVENYEHNHVLRGAVNGIWGEEFVDLKDYLYTYAVEPLSGMSFVAENYSIVAFVYDVQTFEVYDVVHVKINPQSDGK

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Crispr_ID: CP025930_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025930_2

356543-356675

Orphan

Consensus_repeat	Method
GGGGTTATACTATAAAGGGTAGAGACTTTTAAGTATAAAGT	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of CP025930_2

>merge|CP025930|2|356543-356675|CRISPRCasFinder
GAGGTAATACTATAAAGCCCTGAGGGGTTATACTATAAAGGGTAGAGACTTTTAAGTATAAAGTATGGAGACTTGATACTATAAAGTCATGGGGGGTTATACTATAAAGGGTAGAGGCTTTTAAGTATAAAGT

>CP025930|2|2|356543-356675|CRISPRCasFinder
GAGGTAATACTATAAAGCCCTGAGGGGTTATACTATAAAGG	GTAGAGACTTTTAAGTATAAAGTATGGAGACTTGATACTATAAAGTCATGG
GGGGTTATACTATAAAGGGTAGAGGCTTTTAAGTATAAAGT

Protein	Signature genes	Signature genes Name	Protein_function
CP025930.1\|AUR49354.1\|361247_362633_-\|DNA-repair-protein	unknown	unknown	gnl\|CDD\|236994
CP025930.1\|AUR49917.1\|351367_352261_+\|hypothetical-protein	unknown	unknown	unknown
CP025930.1\|AUR49237.1\|370964_372566_+\|serine-protease-carboxy-terminal-processing	unknown	unknown	gnl\|CDD\|223864
CP025930.1\|AUR50430.1\|357178_357670_-\|DNA-polymerase-III	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|99834
CP025930.1\|AUR49962.1\|352274_353132_+\|hypothetical-protein	unknown	unknown	unknown
CP025930.1\|AUR50493.1\|350881_351334_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379445
CP025930.1\|AUR50229.1\|357673_358312_-\|multiple-antibiotic-resistance-protein	unknown	unknown	gnl\|CDD\|225006
CP025930.1\|AUR49269.1\|347885_349406_-\|cobalamin-(vitamin-B12)-biosynthesis-CobJ/CibH-precorrin-3B-C17-methyltransferase-core	unknown	unknown	gnl\|CDD\|273641
CP025930.1\|AUR49445.1\|364742_366041_+\|PF07075-family-protein	unknown	unknown	gnl\|CDD\|377768
CP025930.1\|AUR49651.1\|353424_354510_-\|transposase-in-ISPg8	unknown	unknown	gnl\|CDD\|377531
CP025930.1\|AUR50440.1\|350340_350826_+\|hypothetical-protein	unknown	unknown	unknown
CP025930.1\|AUR49498.1\|346651_347893_-\|cobalamin-(vitamin-B12)-biosynthesis-CbiE-precorrin-6Y-methyltransferase	unknown	unknown	gnl\|CDD\|381171
CP025930.1\|AUR50258.1\|369405_370029_-\|outer-membrane-protein-immunoreactive-23-kDa-antigen-PG66	unknown	unknown	unknown
CP025930.1\|AUR49045.1\|366119_368585_-\|Zn-carboxypeptidase	unknown	unknown	gnl\|CDD\|349483
CP025930.1\|AUR49852.1\|362678_363605_-\|arginine-deiminase	unknown	unknown	gnl\|CDD\|224747
CP025930.1\|AUR49169.1\|344793_346638_-\|cobalamin-(vitamin-B12)-biosynthesis	unknown	unknown	gnl\|CDD\|200107
CP025930.1\|AUR50467.1\|355910_356378_-\|Nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|273496
CP025930.1\|AUR50198.1\|364083_364746_+\|fructose-6-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234947
CP025930.1\|AUR50424.1\|349840_350341_+\|ECF-RNA-polymerase-sigma-factor-SigE	unknown	unknown	gnl\|CDD\|274357
CP025930.1\|AUR49012.1\|358492_361186_-\|transglutaminase-like-enzyme	unknown	unknown	gnl\|CDD\|376628

Protein	Function_ID	Function_description	E-value
CP025930.1\|AUR49354.1\|361247_362633_-\|DNA-repair-protein	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
CP025930.1\|AUR49269.1\|347885_349406_-\|cobalamin-(vitamin-B12)-biosynthesis-CobJ/CibH-precorrin-3B-C17-methyltransferase-core	gnl\|CDD\|273641	TIGR01466, Probable_cobalt-factor_III_C17-methyltransferase, precorrin-3B C17-methyltransferase. This model represents precorrin-3B C17-methyltransferase, one of two methyltransferases commonly referred to as precorrin-3 methylase (the other is precorrin-4 C11-methyltransferase, EC 2.1.1.133). This enzyme participates in the pathway toward the biosynthesis of cobalamin and related products. Members of this family may appear as fusion proteins with other enzymes of cobalamin biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin].	5.61651e-136
CP025930.1\|AUR50430.1\|357178_357670_-\|DNA-polymerase-III	gnl\|CDD\|99834	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III. This subfamily is composed of uncharacterized bacterial proteins with similarity to the epsilon subunit of DNA polymerase III (Pol III), a multisubunit polymerase which is the main DNA replicating enzyme in bacteria, functioning as the chromosomal replicase. The Pol III holoenzyme is a complex of ten different subunits, three of which (alpha, epsilon, and theta) compose the catalytic core. The Pol III epsilon subunit, encoded by the dnaQ gene, is a DEDDh-type 3'-5' exonuclease which is responsible for the proofreading activity of the polymerase, increasing the fidelity of DNA synthesis. It contains three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. The epsilon subunit of Pol III also functions as a stabilizer of the holoenzyme complex.	9.73993e-76
CP025930.1\|AUR50493.1\|350881_351334_+\|hypothetical-protein	gnl\|CDD\|379445	pfam14060, DUF4252, Domain of unknown function (DUF4252). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 154 and 182 amino acids in length.	2.57054e-06
CP025930.1\|AUR50229.1\|357673_358312_-\|multiple-antibiotic-resistance-protein	gnl\|CDD\|225006	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion].	1.4127e-24
CP025930.1\|AUR50424.1\|349840_350341_+\|ECF-RNA-polymerase-sigma-factor-SigE	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	5.6523e-26
CP025930.1\|AUR49445.1\|364742_366041_+\|PF07075-family-protein	gnl\|CDD\|377768	pfam07075, DUF1343, Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.	4.88808e-173
CP025930.1\|AUR49651.1\|353424_354510_-\|transposase-in-ISPg8	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	1.2293e-23
CP025930.1\|AUR49237.1\|370964_372566_+\|serine-protease-carboxy-terminal-processing	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	3.02302e-90
CP025930.1\|AUR49498.1\|346651_347893_-\|cobalamin-(vitamin-B12)-biosynthesis-CbiE-precorrin-6Y-methyltransferase	gnl\|CDD\|381171	cd11644, Precorrin-6Y-MT, Precorrin-6Y methyltransferase (also named CbiE). CbiE (precorrin-6Y methyltransferase, also known as cobalt-precorrin-7 C(5)-methyltransferase, also known as cobalt-precorrin-6Y C(5)-methyltransferase) catalyzes the methylation of C-5 in cobalt-precorrin-7 to form cobalt-precorrin-8. It participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. CbiE functions in the anaerobic pathway, it is a subunit of precorrin-6Y C5,15-methyltransferase, a bifunctional enzyme: cobalt-precorrin-7 C(5)-methyltransferase (CbiE)/cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) (CbiT), that catalyzes two methylations (at C-5 and C-15) in precorrin-6Y, as well as the decarboxylation of the acetate side chain located in ring C, in order to generate precorrin-8X. CbiE and CbiT can be found fused (CbiET, also called CobL), or on separate protein chains (CbiE and CbiT). In the aerobic pathway, a single enzyme called CobL catalyzes the methylations at C-5 and C-15, and the decarboxylation of the C-12 acetate side chain of precorrin-6B.	1.19969e-56
CP025930.1\|AUR49045.1\|366119_368585_-\|Zn-carboxypeptidase	gnl\|CDD\|349483	cd18173, M14_CP_bacteria, bacterial peptidase M14 carboxypeptidase, uncharacterized. This family contains only bacterial carboxypeptidase (CP) members of the M14 family of metallocarboxypeptidases (MCPs), mostly of which have yet to be characterized. The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages that would otherwise damage the cell. In addition, all members of the N/E subfamily contain an extra C-terminal domain that is not present in the A/B subfamily. This domain has structural homology to transthyretin and other proteins and has been proposed to function as a folding domain. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation.	1.09213e-157
CP025930.1\|AUR49852.1\|362678_363605_-\|arginine-deiminase	gnl\|CDD\|224747	COG1834, COG1834, N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism].	1.05515e-25
CP025930.1\|AUR49169.1\|344793_346638_-\|cobalamin-(vitamin-B12)-biosynthesis	gnl\|CDD\|200107	TIGR01465, Precorrin-4_C11-methyltransferase, precorrin-4 C11-methyltransferase. This model represents precorrin-4 C11-methyltransferase, one of two methyltransferases commonly referred to as precorrin-3 methylase (the other is precorrin-3B C17-methyltransferase, EC 2.1.1.131). This enzyme participates in the pathway toward the biosynthesis of cobalamin and related products. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin].	3.09664e-137
CP025930.1\|AUR50467.1\|355910_356378_-\|Nucleoid-associated-protein	gnl\|CDD\|273496	TIGR01201, HU_rel, DNA-binding protein, histone-like, putative. This model describes a set of proteins related to but longer than DNA-binding protein HU. Its distinctive domain architecture compared to HU and related histone-like DNA-binding proteins justifies the designation as superfamily. Members include, so far, one from Bacteroides fragilis, a gut bacterium, and ten from Porphyromonas gingivalis, an oral anaerobe. [DNA metabolism, Chromosome-associated proteins].	6.06588e-57
CP025930.1\|AUR50198.1\|364083_364746_+\|fructose-6-phosphate-aldolase	gnl\|CDD\|234947	PRK01362, PRK01362, fructose-6-phosphate aldolase.	4.79442e-143
CP025930.1\|AUR49012.1\|358492_361186_-\|transglutaminase-like-enzyme	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	1.93159e-17

>CP025930.1|AUR50467.1|355910_356378_-|Nucleoid-associated-protein
MLNLSVKSRLMKIGKHKDKTMYYAQMDKPRVIEYEDVIKDIAEMSSLTTGDVRNAIDRLAYYLQRELTEGNTVRLGQIGTFRVSVPSKYVETEKEVNASILKKPRIRFYINNTLSAVADNIRLAVYRNGQKVDDTTSPSTPSEGGGEQTGGSGGL
>CP025930.1|AUR49651.1|353424_354510_-|transposase-in-ISPg8
MAYQSKNTDEHVTFADALLSKRYRKAQNDFLNQVDTLIDWRPIRTLINKKYTKRQNAIGAPAYDVILLFKMLLLETWYNLSDCALEERINDSITFSRFLGLKMEEVSPDHSTISRFRSALTELGLMDKLLAQFNKQLSRHHISVREGVLVDASLVETPHKPNGSITIEVADDRQDNRSEAEKEAEEDYQKQVVRQRKGTDEEARWVYKQKRYHYGYKKHCLTNVQGIVQKVITTAANRSDTKEFIPLLQGANIPQGTAVLADKGYACGENRSYLQTHHLQDGIMHKAQRNRALTEEEKQRNKAIGPIRSTIERTFGSIRRWFHGGRCRYRGLAKTHTQNILESIAFNLYRTPGIIMSSSVG
>CP025930.1|AUR49962.1|352274_353132_+|hypothetical-protein
MKRFFLTTAILLSSVLASYADSLPSAVRDTVIRAGEKTIMIKDGEDDFEVIIQESMPSGDTIRNEKIFRGVYRNGRSIEQRFRNTLINRPNRDKEMPVWGTYGFGSFEWGELKVDDSHSDIGRSHSYRVSIQIFGDIYRLNKYLVLTYALGWDADIYRITDSKTLKNIDGVTTVVDVPGRAECTLTAAYLKAMPALAFNGVGSNLTVYIAPVLRAKVYSAATTDGPDGRLEKLRRVKLNTFSVEARAGINYRNAGIFFTYSLTPLFRSGKGPKLHPYTIGLSLSL
>CP025930.1|AUR49917.1|351367_352261_+|hypothetical-protein
MKKAFLLGLAGIFFAQTAIAGNAAQGVPDTTVRIEDKVLVINETEDDIDIMLYRYNPDGTRGRSEQVFKGVYLKGRSIEQRFRNTIFDVPLNLTRSNKCSGDKRIRSIGSGSFKLGFVNLTGSAGEHINASSSLRYTLGLMSVSYRLNDWLVIAPNLDIEFNSIHLKNNYSFQDVEGLTQVLPAAEGVTYDNSRLHITYMNVAVPFMMKKCRSSFSLYAAPVLKFKTASSSKVWLPDNKSHQKHGRDLNLNPIVLEARVGINYSAFNLYGSYTLTPLFRSGKGPDTRMFAIGFGFGF
>CP025930.1|AUR50493.1|350881_351334_+|hypothetical-protein
MKQYKLYLFTLLLCLTALASAYGQSSAQPHVQGVFDHYGRAKDVTMVVMNREMLVEYDIHLYKSLTMRDPGKRLQKIQAAVSADRKSAKSIKEVIDSGILTSGYYELPPANGLNRYVLYRYNPKRGITLIYIEGKIGSEDLVSLLMQNKN
>CP025930.1|AUR50440.1|350340_350826_+|hypothetical-protein
MKRIGFNKKAVPTEAEIGQLLDKYFDGLTSGAEEDRLRRYFATAKQPEQWEHLRPLFGYVSCRRAVDGRFLSDTRKLATRNLLSRRILWSVGGASVAAAIALTIALRSPHVADQPLPTTGSFAVVNGERVNDPDLVRLYAQEAFDAVSIDREELAQELFDL
>CP025930.1|AUR50424.1|349840_350341_+|ECF-RNA-polymerase-sigma-factor-SigE
MEVEAFAHSVAPLAPRLKRVAYSILDDEEAAADVSQEALMRLWINRERLGGYDSIEAVAVTTARRIALDMLRKEGRMEPLQDDLPFSDHAPTPQGVLEQSETMRLVEAAIEALPPLQRMTFRLKEIEGYESEVIARLVGVKVEAVYTNLSRARRALRTALALQLKR
>CP025930.1|AUR49269.1|347885_349406_-|cobalamin-(vitamin-B12)-biosynthesis-CobJ/CibH-precorrin-3B-C17-methyltransferase-core
MSGRYGCMSYFFTFVGSAGEHYSPAISILPIPSSVFSKMNRARIIVAGIGPGGASDITPAVLSAIGRSDVVVGYKYYFRFIEPYLRPDTHCVDTGMKKERQRAEEAFGYALSGKTVCVISSGDAGIYGMAPLIYEMKRAKGVEMDIEVLPGISAFQKAASLLGAPIGHDLCLISLSDLMTPWPIIEKRIVAAASADFVTAIYNPKSEGRYWQLYRFVEIFMQYRSADTPVGLVRQAGREEEQVTVTTLGEFDPEVVDMFTVVLVGNSQSYCYEGHFITPRGYYPEEEIEAKGIGQEIMIKSFRTIEKELHRQDWPLDHKWALLHAIHTTADFDMENILYTDAGAVASLYEMIEAGRLRTIVTDVTMVTSGIRKGAQERLGVEAKCYLHDPRVAELAARHGITRTQAGIRLAVEEHPDALFAFGNAPTALQEVADLIRRGKASPAGIIAAPVGFVHVQESKHAVKPFRSIPKIIVEGRKGGSNLAATLVNAILCYNDAEQLRPGRDV
>CP025930.1|AUR49498.1|346651_347893_-|cobalamin-(vitamin-B12)-biosynthesis-CbiE-precorrin-6Y-methyltransferase
MCEATYGGASPQIRRQRFVILGMSDDPHPFFPPAAMTAIASGKVFSGGKRHHEIVRGLLPADAEWIDITVPLDDVFARYREFEEIVVFASGDPLFFGFANTVMNRLPDAEVTVYPTFNSLQMLAHALCMPYHDMRIVSLTGRPWHEFDRALIERAEKIGILTDHEHTPSAIAMRMLDYGYEDYTMSVGTRMGNPQEQCLDTLSLQEAADRDFERPNCVILSATRPFVCSRAPLGLSESAFMPLNGRTKMITKMPFRLVSLSCLELHRASSFWDIGFCTGSVSIEAKLNFPHLHITAFEIRPEGAELMAVNSRRFGAPGIAYRIGDFMEEDISSLAPPDAVFIGGHGGRLVEMIAKVHSVMTKGGLLVFNSVSEESRHLFLTGIEVCGMELLSSIRLTADGNNPIDILQARKKE
>CP025930.1|AUR49169.1|344793_346638_-|cobalamin-(vitamin-B12)-biosynthesis
MSKPNHTAIICVSAAGLALAWTIASELSGEKEIFAVGTSFTDCTEDVSCVSSIAELMAESFARYDAWVFIGAMGICIRSIAPYVADKHHDPAVVNVDSTGRYVVSVLSGHVGGANDLTRLIASAIGGEPVVTTQSDRTGLWALDTLASTYGWKAVSNTGDMNRPISLFVGGARTALVLETSGRGEDFLERSCPPHVRLFYSFDAVDQAEFDLLLVVSARHLESRLPMICYYPPVLTIGIGCRRLCAPEGIAKHIFSEIRRLGYAPEAIGRIATIDIKTEEPLVADLVHRLGGIPLHIYTGQDLQPVGVANPSEKVFAVTGCYGVAEASARKAADMGSLVIEKQKGQLSEGNDFTFAVAQTADSTRAGHIEIVGAGPGDPDLVSVRGRQFLEKADLILYAGSLVPRELTACAKAGATVRSSAAMNLQEQFEIMSDFYRRGKLVVRLHTGDPCIYGAIQEQMALFDHYGMRYHITPGISSFQAAAAALRSQFTIPERTQTIILTRGEGRTPMPEKEKLHLLAQSQSTMCIFLSAGIVDDVQRELMMHYSPDTPVAACYRLTWPDEKIFRGTLRHLAEIVKGNNLTLTTTIVVGEAIDNREGLSRLYADEFKHLFRT
>CP025930.1|AUR50430.1|357178_357670_-|DNA-polymerase-III
MLDFAAIDFETANAERTSVCSVGIIVVRGGEIVHRYYSLIRPEPDYYNYHNTRVHGLTAADTESARIFPDVWAEVEPLIAGLPLVAHNKPFDEGCLKAVFRMYRMDYPDYPFFCTLQAARRQLRHLSDHRLPAVAQCCGYILAQHHQALADAEACAAIALKLL
>CP025930.1|AUR50229.1|357673_358312_-|multiple-antibiotic-resistance-protein
MDFLDKVLQDLSLIDLKEIIGSFVILFVAIDIIGAIPVVLSLKDRGQSFHSGKATTFSCVMMLAFLFIGEPMLNFFGVDVSSFSVAGAIVLFVMAVEMIFGVQIFKDDGPAGSATIVPLVFPLFAGAATFTTILTLRADGIAMTNIAIAILINVAMIYLMLRFVNQLERFFGKGGIYILRKFFGVILLAISVKFFTGNIVKIIETMNEALQK
>CP025930.1|AUR49012.1|358492_361186_-|transglutaminase-like-enzyme
MKENKLFRIGILAIVALLLTGCKGSDTHFITDADFRKQVQEDLRVKREALSEGDLFEVLERDSLRTEEREALEFLYAYMTLPDIVDYSGDFYLQNVRESFRAREEMSWGKEVPELLFRHFVLPIRVNNENLDSSRMVFYAELKERVKGMSMKEAALEVNHWCHEKATYSPSDPRTRSPLATVKNALGRCGEESTFTVAALRSVGIPARQVYTPRWAHTDDNHAWVEVWVDGKWYFIGACEPAAELNDAWFNSSVVRAMLTHTRVFGRYEGPEEKLFRTANYTEINCIDNYAPTEMIEVKVTDRSGAVVEGADIRFCIYNYSEFYPVVTKQSDAQGQASLRVGKGDMLIWAAKDGLFGYALSKADDRKPLAIALDSFEAQPEWADFKIVPPAGDPIPTTCSPQQISTNDARLLREDSIRAAYEATFATAEQSAALAAELGVDAPALTGILQTSRGNHADIEGFLRSVEAGKARQRAMDLLQTVSPKDLTDTPESLLKVIFRDMAEPAPEAASGEAYRHHLRYVASPRIYTEMLSSFVPTLRSILTAKEQEAMRQDPAELVRWVSSNIRLDTLYNTQYTTITPVGVWRAKRADLRSMGIFFVAMARTLGIPARYDEVTGKIQYSKELMPLRWSDVNLRESKTALKEQGSLALDYTPTALAPNPNYYSRFTVAELQPSGIIRTLYYDENEPTDLKTLFDRPKEMNAGHYFLVTGTRMASGSVLCRMRKFTVEAGKTARQPLELLHDSTDIQVIGSINAEQLYHDLSHAEDRSLLSTTGRGYFAMAILGAGQEPTNHALKDLEKVKADFEQWGRKLILLFPDADGHKRYKPADFPSLPETAVFGLDIQGRNAAMIREAANLPDATNLPIVIIADSFGRVVFVRQGYTIGLGEQMMQVIHRL
>CP025930.1|AUR49354.1|361247_362633_-|DNA-repair-protein
MAKEKTIYVCRSCGTKYAKWQGNCNACGEWNCIDEEKVPAPASGKHAAKSFMPREQDNRPRLLQDVESGDEERIRLGDEEFDRVLGGGIVKGAFVLLGGEPGIGKSTLILQTVLRLPQLRTLYVSGEESARQLKMRAERLGQAMNECYVYCETNIERILSRAEELTPDLLVIDSIQTVYTEEMESSAGSVGQIRECAALLLKYCKTTGIPVIVIGHITKEGSIAGPKVLEHIVDTVLLFDGDKHHLYRILRGQKNRYGSTSELGIYEMRQDGLRGVENPSEHLITRNREDLSGIAIAVAMEGIRPILIEAQALVSSAIYANPQRSATGFDIRRMNMLLAVLEKRAGFKLIQKDVFLNIAGGIKIADPATDLAVISAVLASSLDIVIPPAVCMTGEVGLSGEIRPVSRIEQRITEARRIGFKEILVPADNFRQEDAGRFGIRLVPVRKVEEAFRHLFSKGRE
>CP025930.1|AUR49852.1|362678_363605_-|arginine-deiminase
MMKILPHVTNETAPLRTVVLGLPDSTGGAPALADTYDAKSYESVLRGTYPSDGDIKIEMDAVLDVLVRHGIEVLRPEPIANYNQIFARDVAFAIDDKLFVSNLIADRARESEAFSPIWDCVGESHLVRLSEDIHAEGGDILLYDDILFIGTYLQKDYPSFKTARTNARAVDFFREFFPHKTIIPIELIKHDTDPMRSVLHLDCAFQPVGRGRAIVYRQGFLHSESFGLITEIFGGRDNLFEITPEEAYMMNTNIFSISPDTVISERNFVRLNNHLREAWGMTVEEVPYAEISKQGGLLRCSTMPLVRE
>CP025930.1|AUR50198.1|364083_364746_+|fructose-6-phosphate-aldolase
MKFFIDTANLDQIREANDMGVLDGVTTNPSLMAKEGISGKDNCMRHYLAICEIVDGDVSAEVIATDYEGMIREGEELAALHPQIVVKVPCTAEGIKAIKYFSDKGIRTNCTLIFTVGQALLAAKAGASYVSPFVGRLDDIASDGIKLVENIVAMFGFYRYETEVLAASIRHTQHIIQCLEAGADVATCPLNAIKGLLKHPLTDSGLKAFLEDHRRVNEGK
>CP025930.1|AUR49445.1|364742_366041_+|PF07075-family-protein
MIPRFFRKYSIALACISGLMSFSAYTGCQVAGTAHSSRSEEVGSQTAHSEQEISVATPREEVRVVVGAERTELLLPLLRDKRVALVANATSVVGTEREHLLDHLLRQGVNVVKILGPEHGFRGDADAGATVKDERDVRTGIPIVSLYGKNKKPTPRMLADVDVLLFDMQDVGTRFFTYISTLHYVMEACAEEQKKLIVTDRPNPNDYVDGPILQDDCRSFVGVDPLPILHGLTIGELANMINGEGWLGKKEMKCDLTVVPMLGWKHGQEYALPVKPSPNLPTANAIAWYPSLCLFEATIMSVGRGTDFPFEVLGYPKKVFGSFVFVPRPIRGMDSNPLYKGRHCYGVDLRGEKAPRGLSLQLLIRYYRTARREGIKFVNRKQMFNLLAGTKELAQQIEKGRTEEQIRASWQSDLDKYHKLRKKYLLYPTPTE
>CP025930.1|AUR49045.1|366119_368585_-|Zn-carboxypeptidase
MKKKNFLLLGIFVALLTFIGSMQAQQAKDYFNFDERGEAYFSFKVSDRAVLQELALIMSIDEFDPVTNEAIAYASEEEFEAFLRYGLKPTFLTPPSMQRAVEMFDYRSGEKYEWNAYPTYEAYISMMEEFQTKYPSLCTTSVIGKSVKDRKLIICKLTSSANTGKKPRVLYTSTMHGDETTGYVVLLRLIDHLLSNYESDPRIKNILDKTEVWICPLTNPDGAYRAGNHTVQGATRYNANNVDLNRNFKDDVAGDHPDGKPWQPEATAFMDLEGNTSFVLGANIHGGTEVVNYPWDNKKERHADDEWYKLISRNYAAACQSISASYMTSETNSGIINGSDWYVIRGSRQDNANYFHRLREITLEISNTKLVPASQLPKYWNLNKESLLALIEESLYGIHGTVTSAANGQPLKCQILIENHDKRNSDVYSDATTGYYVRPIKAGTYTVKYKAEGYPEATRTITIKDKETVIMDIALGNSVPLPVPDFTASPMTISVGESVQFQDQTTNNPTNWEWTFEGGQPAMSTEQNPLVSYSHPGQYDVTLKVWNASGSNTITKEKFITVNAVMPVAEFVGTPTEIEEGQTVSFQNQSTNATNYVWIFDGGTPATSEDENPTVLYSKAGQYDVTLKAISASGETVKTKEKYITVKKAPVPAPVADFEGTPRKVKKGETVTFKDLSTNNPTSWLWVFEGGSPATSTEQNPVVTYNETGKYDVQLTATNEGGSNVKKAEDYIEVILDDSVEDIVAQTGIVIRPQNGTKQILIEANAPIKAIVLYDINGRVVLKTTPNQLRSTVDLSILPEGIYTINIKTEKSARTEKIHIG
>CP025930.1|AUR50258.1|369405_370029_-|outer-membrane-protein-immunoreactive-23-kDa-antigen-PG66
MKRMLLLLVVLLYGIAGRLAAQDVIRPWSLQVGAGYSDTENIPGGFTYGFYLGKRMGSFLEVGLSMYNSTRQTANNADSFASNEGDGSFQVNMSSPNEKWSFFDAGSANCYMIVVGVNPLHLFWQNSRHNLFLAVQAGLSNKHNIHFIYGDKGAKVSIYTNSNTYIGYGARVAYEYQIHKNVGAGAAVMYDHGNKMLTAMATLSTHF
>CP025930.1|AUR49237.1|370964_372566_+|serine-protease-carboxy-terminal-processing
MNKASKSIILLLLLGCSASAQKLSSSMKEALRKLETAVYAISSLYVDSVDNNKLTEYAIRGVLSELDPHSVYSDAEETKSELEPLNAGFDGIGVQFNMLTDTVYVVQVIAGGPSEKAGLLAGDRIVSVDDTVIAGVKMKTNDVMKRLRGPRGSKVKLGVWRGNDRLNITVKRGLVPVHSREACYMVDERTGYIRLSRFSRTTYDEFAEGIALLRGRGMQQLVLDLRFNGGGILDQAVEMAGTFLPEGSTVLTVRNNRMPRISERMEATSNNLLPKDLPLVVLVNEFSASASEILAGAIQDWDRGVVIGRRTFGKGLVQRPLPFQDGSMIRLTIARYYTPSGRSIQKPYAKGNFKAYEQELIGRFKHGESIHSDSIRFPDSLRYKTLVTGRTVYGGGGIMPDLFIPTDTALFNKLHRELLNKGIFNRAVLKYVDAHRQKLRQRFPDRQSYATFSIPEELTESLKAFAEAEKITWSTELFAQAEELIKCQLHAYIARDILGENDFFYFFNRMDKEYIKALDLLNDSDEYKRLLGK

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Crispr_ID: CP025930_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025930_3

781004-781111

Orphan

Consensus_repeat	Method
GAAGCGATTTCGGCGAAAAAATTCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025930_3

>merge|CP025930|3|781004-781111|CRISPRCasFinder
GAAGCGATTTCGGCGAAAAAATTCCTTGCTGCAGCTTGCAGGAAGCTACTTTGGCGAAAAAATTCCTATTTGCAGCTTGCAAGAAGCGATTTCGGCAAAAAAATTCCT

>CP025930|3|3|781004-781111|CRISPRCasFinder
GAAGCGATTTCGGCGAAAAAATTCCT	TGCTGCAGCTTGCAGGAAGCTACTTTGGCGAAAAAATTCCTATTTGCAGCTTGCAA
GAAGCGATTTCGGCAAAAAAATTCCT

Protein	Signature genes	Signature genes Name	Protein_function
CP025930.1\|AUR49490.1\|779551_780805_+\|efflux-pump-periplasmic-linker	unknown	unknown	gnl\|CDD\|273776
CP025930.1\|AUR49415.1\|778177_779512_+\|outer-membrane-protein-TolC-Type-I-secretion-system	unknown	unknown	gnl\|CDD\|224455
CP025930.1\|AUR50204.1\|788708_789368_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
CP025930.1\|AUR50295.1\|772738_773332_-\|indolepyruvate-oxidoreductase-subunit-IorB	unknown	unknown	gnl\|CDD\|180732
CP025930.1\|AUR50069.1\|775043_775805_-\|NADP-dependent-3-hydroxy-acid-dehydrogenase-YdfG	unknown	unknown	gnl\|CDD\|187604
CP025930.1\|AUR49600.1\|769338_770478_+\|ABC-type-Fe3--hydroxamate-transport-system-periplasmic-component	unknown	unknown	gnl\|CDD\|238561
CP025930.1\|AUR49447.1\|794427_795723_-\|succinyl-CoA:coenzyme-A-transferase	unknown	unknown	gnl\|CDD\|223504
CP025930.1\|AUR49385.1\|791710_793066_-\|succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143440
CP025930.1\|AUR50660.1\|795728_796013_-\|Fe/S-biogenesis-protein	unknown	unknown	gnl\|CDD\|376458
CP025930.1\|AUR49546.1\|776232_777426_+\|carboxynorspermidine-synthase	unknown	unknown	gnl\|CDD\|224662
CP025930.1\|AUR49693.1\|770474_771545_+\|hemin-transport-system-permease-protein	unknown	unknown	gnl\|CDD\|376439
CP025930.1\|AUR50070.1\|771588_772347_+\|ferric-enterobactin-transport-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
CP025930.1\|AUR49054.1\|783844_786214_+\|cell-division-FtsX-related-transmembrane-transport-protein	unknown	unknown	gnl\|CDD\|274576
CP025930.1\|AUR50411.1\|777462_777975_+\|nicotinamidase	unknown	unknown	gnl\|CDD\|238493
CP025930.1\|AUR49619.1\|793261_794377_-\|succinate-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|341482
CP025930.1\|AUR49236.1\|773358_774966_-\|indolepyruvate-oxidoreductase-subunit-IorA	unknown	unknown	gnl\|CDD\|274526
CP025930.1\|AUR49253.1\|789673_791227_-\|hemerythrin-HHE-cation-binding-domain-protein	unknown	unknown	gnl\|CDD\|225301
CP025930.1\|AUR49306.1\|796085_797546_-\|4-hydroxybutyryl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|225243
CP025930.1\|AUR49056.1\|781454_783806_+\|macrolide-export-ATP-binding/permease	unknown	unknown	gnl\|CDD\|274576
CP025930.1\|AUR49053.1\|786240_788616_+\|cell-division-FtsX-related-transmembrane-transport-protein	unknown	unknown	gnl\|CDD\|274576

Protein	Function_ID	Function_description	E-value
CP025930.1\|AUR49490.1\|779551_780805_+\|efflux-pump-periplasmic-linker	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	3.45071e-33
CP025930.1\|AUR49415.1\|778177_779512_+\|outer-membrane-protein-TolC-Type-I-secretion-system	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	2.14173e-40
CP025930.1\|AUR50204.1\|788708_789368_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	7.00946e-113
CP025930.1\|AUR50295.1\|772738_773332_-\|indolepyruvate-oxidoreductase-subunit-IorB	gnl\|CDD\|180732	PRK06853, PRK06853, indolepyruvate oxidoreductase subunit beta; Reviewed.	4.90894e-83
CP025930.1\|AUR50069.1\|775043_775805_-\|NADP-dependent-3-hydroxy-acid-dehydrogenase-YdfG	gnl\|CDD\|187604	cd05346, SDR_c5, classical (c) SDR, subgroup 5. These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	4.80931e-149
CP025930.1\|AUR49600.1\|769338_770478_+\|ABC-type-Fe3--hydroxamate-transport-system-periplasmic-component	gnl\|CDD\|238561	cd01141, TroA_d, Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	7.17779e-24
CP025930.1\|AUR49447.1\|794427_795723_-\|succinyl-CoA:coenzyme-A-transferase	gnl\|CDD\|223504	COG0427, ACH1, Acetyl-CoA hydrolase [Energy production and conversion].	1.92917e-125
CP025930.1\|AUR49385.1\|791710_793066_-\|succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143440	cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.	0
CP025930.1\|AUR50660.1\|795728_796013_-\|Fe/S-biogenesis-protein	gnl\|CDD\|376458	pfam01106, NifU, NifU-like domain. This is an alignment of the carboxy-terminal domain. This is the only common region between the NifU protein from nitrogen-fixing bacteria and rhodobacterial species. The biochemical function of NifU is unknown.	5.97485e-17
CP025930.1\|AUR49546.1\|776232_777426_+\|carboxynorspermidine-synthase	gnl\|CDD\|224662	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism].	1.91124e-158
CP025930.1\|AUR49693.1\|770474_771545_+\|hemin-transport-system-permease-protein	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	7.40767e-68
CP025930.1\|AUR50070.1\|771588_772347_+\|ferric-enterobactin-transport-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	2.48652e-78
CP025930.1\|AUR49054.1\|783844_786214_+\|cell-division-FtsX-related-transmembrane-transport-protein	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	9.82959e-33
CP025930.1\|AUR50411.1\|777462_777975_+\|nicotinamidase	gnl\|CDD\|238493	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase). Nicotinamidase, a ubiquitous enzyme in prokaryotes, converts nicotinamide to nicotinic acid (niacin) and ammonia, which in turn can be recycled to make nicotinamide adenine dinucleotide (NAD). The same enzyme is also called pyrazinamidase, because in converts the tuberculosis drug pyrazinamide (PZA) into its active form pyrazinoic acid (POA).	1.33123e-31
CP025930.1\|AUR49619.1\|793261_794377_-\|succinate-semialdehyde-reductase	gnl\|CDD\|341482	cd14860, 4HBD_NAD, 4-hydroxybutyrate dehydrogenase, also called gamma-hydroxybutyrate dehydrogenase, catalyzes the reduction of succinic simialdehyde to 4-hydroxybutyrate in the succinic degradation pathway. 4-hydroxybutyrate dehydrogenase (4HBD) is an iron-containing (type III) NAD-dependent alcohol dehydrogenase. It plays a role in the succinate metabolism biochemical pathway. It catalyzes the reduction of succinic simialdehide to 4-hydroxybutyrate in the succinate degradation pathway This succinate degradation pathway is present in some bacteria which can use succinate as sole carbon source.	0
CP025930.1\|AUR49236.1\|773358_774966_-\|indolepyruvate-oxidoreductase-subunit-IorA	gnl\|CDD\|274526	TIGR03336, IOR_alpha, indolepyruvate ferredoxin oxidoreductase, alpha subunit. Indolepyruvate ferredoxin oxidoreductase (IOR) is an alpha 2/beta 2 tetramer related to ketoacid oxidoreductases for pyruvate (1.2.7.1, POR), 2-ketoglutarate (1.2.7.3, KOR), and 2-oxoisovalerate (1.2.7.7, VOR). These multi-subunit enzymes typically are found in anaerobes and are inactiviated by oxygen. IOR in Pyrococcus acts in fermentation of all three aromatic amino acids, following removal of the amino group by transamination. In Methanococcus maripaludis, by contrast, IOR acts in the opposite direction, in pathways of amino acid biosynthesis from phenylacetate, indoleacetate, and p-hydroxyphenylacetate. In M. maripaludis and many other species, iorA and iorB are found next to an apparent phenylacetate-CoA ligase.	1.37331e-175
CP025930.1\|AUR49253.1\|789673_791227_-\|hemerythrin-HHE-cation-binding-domain-protein	gnl\|CDD\|225301	COG2461, COG2461, Uncharacterized conserved protein [Function unknown].	5.7042e-105
CP025930.1\|AUR49306.1\|796085_797546_-\|4-hydroxybutyryl-CoA-dehydratase	gnl\|CDD\|225243	COG2368, COG2368, Aromatic ring hydroxylase [Secondary metabolites biosynthesis, transport, and catabolism].	0
CP025930.1\|AUR49056.1\|781454_783806_+\|macrolide-export-ATP-binding/permease	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	9.95838e-21
CP025930.1\|AUR49053.1\|786240_788616_+\|cell-division-FtsX-related-transmembrane-transport-protein	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	1.76167e-32

>CP025930.1|AUR49490.1|779551_780805_+|efflux-pump-periplasmic-linker
MDRKIEKKKTLIPRKYYPYAGGAIVILALAAWAVFGNHSTKFRAERARISIDSVRRGEFNDYVRINGQVQPINSIQISAVEGGMVAEKTVEEGAMVHKGDIIVRLTNPMLNLNILDSEAQLAEKQNFLRNTQVTMEQDRLNLKRESLNLRLDIERKKRKAEQYARLYKEKLCSREEYLQAGEDYQYAVEGSRLVMERQRQDSLYRGIQVRQMEESLHNMRRNLEMVRARVEDLNVKAPADGQLGLLDVEIGQTVGAGSRIGQINVLSDYKVEAMIDEHYIDRVKAGLAASFERQGRDFSLRVRKVYPEVRDKQFRTDFVFDGERPDNIRTGQTYYINLRLGQPSEAIMIPRGAFYQNTGGRWIFVVTPDGKRAVRRDITIARQNPQYYEVTSGLHAGEMVITSSYDMFGDAEEIILN
>CP025930.1|AUR49415.1|778177_779512_+|outer-membrane-protein-TolC-Type-I-secretion-system
MRFQHYLICTAAVAALAANPLTGQSNMTLEECIDYARRHSSAVALSAAELEQSKADYLQAVGNFLPRVSAGTGASWNFGRGLDAETNTYTDINSFNNSYSIHATMTLFDGLQSVYRLRMAHARREASRLSVREQQELAALGTTEAYYDLVYARQMQELAMQKYEESSRLHRQTARMEELGMKSRPDVLEMQSRMAGDRLALTQADNQCIIALIRLKEKMNFPIDDELVVDDMPADSLSADMAESDSSAGVFARATHHHPVLLRAKLDEQAASDRLRAARGAFLPSVSVSGGWNTGFSRFLNGSDYTPFSEQFRNRRGEYISLNLSIPIFSGFSLVSNLRQARADRRAASVRRGEAERRLYSEIAQAMADRDAALASYRQAKEHTDAMQAAYEAVLQRYEEGLNTAIDLTTQANRLLDARVQRLRAAMTYRLKCKLIAYYGCLSD
>CP025930.1|AUR50411.1|777462_777975_+|nicotinamidase
MVLLIVDPQVDFVSGSLAVEGAPKAMKALAEYMAAHRKEIKSIVVTMDQHPADHCSFVAQGGQWPSHCVRYTVGAAIEPCIAEALAACSAEGIPVEMIEKATTQERDAYSAFETEVPDSLRSAERIVMAGIAGDYCVRQSVLDLERHGLGERIELLKEGIAYIAEEENRP
>CP025930.1|AUR49546.1|776232_777426_+|carboxynorspermidine-synthase
MGKVLIIGAGGVGTVVAKKVAMNTDVFTEIMLASRTRSKCDKIASEIKNIRIQTAQVDADNVEELVALFESFKPELVINVALPYQDLTIMDACLRCGVNYLDTANYEPLDEAKYEYSWQWAYQDRFRKAGLTAILGCGFDPGVTSVYTAYAAKHHFDEIHYLDIVDCNGGDHHKAFATNFNPEINIREITQKGKYWENGRWIETEPQEIHKTLAYPSIGERESYLLYHEELESLVKNFPTIKRARFWMTFGQEYLTHLRVMQNIGMTRIDPIMYNGVEIVPIQFLKAVLPNPGDLGENYTGETSIGCRIRGIRDGKEHTYYIWNNCSHEVAYKETGTQGVSYTTGVPATVGAMMFMKGIWRKPGVFNVEEFDPDPFLEEVAKQGLPWHEKHDIDLEL
>CP025930.1|AUR50069.1|775043_775805_-|NADP-dependent-3-hydroxy-acid-dehydrogenase-YdfG
MNPIALITGATSGIGAASARRLASLGYNLIITGRRSERLQNIADEIRAEYPVEILPLSFDVRNREEVEAHLGNLPDPWQAVSVLVNNAGLAAGLDPIQSGDIEDWECMIDTNIKGLLYVTRTISPGMIARSAGHIINIGSIAGKEVYSNGNVYCATKHAVDALSKAMRIDMLPYGIKVTQICPGAVETEFSLVRFHDDQAKADAVYKGFTPLCANDIAECIAAVLNLPDNICINDMVVMPKAQAGSGHFFKQV
>CP025930.1|AUR49236.1|773358_774966_-|indolepyruvate-oxidoreductase-subunit-IorA
MQKQLLLGVEAIAQAALDAGISGVYAYPGTPSTEITEHIQNSRMAKERNVHREWAANEKTAMESALGMSYAGKRALVCMKHVGMNVAADCFMNAAITGANGGMVIVAADDPSMHSSQNEQDSRVYGQFAMIPVMEPSNQQEAYDMTRLAFDLSERLGTPVMMRITTRLAHSRAGVVPTEPIGENELHLPEDKRQYVLLPGIAKKRYRILLDKQTDFVRESENSPYTEYIDAADKSKGIVACGIAYNYLMEAFKAQVPYPVLKVTQYPIPHKQMERLLNECGDIVVMEEGYPVVEQLLKGFPGLERIKGRLDGTLPRDGELNPDHVAKAFNIPVVEGEPIPDLVAARPPALCKGCSHRDVYDALNEVLTEYPNGRVFSDIGCYTLGALPPYEAINSCVDMGASITMAKGAADAGLFPAVSVIGDSTFTHSGITGLLDAINENSNITVIISDNESISMTGGQHSSAYGKVEAICRGIGVDPDHIKELLPVPKNHDELCSIIREEINYEGVSVIIPRRVCIQKHARDAKAAKRAKAKE
>CP025930.1|AUR50295.1|772738_773332_-|indolepyruvate-oxidoreductase-subunit-IorB
MKTDIILAGVGGQGILSIAAAIGSAALTNNLYLKQAETHGMSQRGGDVQSFLRLSDAPIYSDLIPIGGADLILSVEPMEALRYLPYLKPDGYVVTNTVPFINIPNYPETTSVISKIESLPHHVLIDADSIARDEVGNVRASNFVMLGAASPFIEIPFDYLAGGIEAIFSRKGQEVVDMNLKALNAGREFALRYAAGK
>CP025930.1|AUR50070.1|771588_772347_+|ferric-enterobactin-transport-ATP-binding-protein
MEKSIELSRLAIGYRTKSGDRIVASGLEAHLHAGQLTALLGVNGAGKSTLMRTMAGFMKPLSGQIHLLGRSLDSYKEIEIAKRIGVVLTDNCRIAGMTAGELVALGRSPYTGFWGRLQKGDRKLVAEAVERVGIAPLINRELTTLSDGERQKVVIAKALAQQTPIIFLDEPTAFLDYPSKMELLHLLHSLAHDTGRTIFLSTHDLDAILPMADHVWLLDKERSFREGTPASLASALEDYFGYIHPSPTLEPV
>CP025930.1|AUR49693.1|770474_771545_+|hemin-transport-system-permease-protein
MTSVSHLRTISVAGILAALGGAVLILFGVNLFLGSVAIPMSEIFRHLFSDRPEGGEALVHYNILWKSRLPEALTAAFAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVALVVLLSGSLGGVALSSLGYMGEVAMNIAAAVGSLAVMGLIVFVSTKVRSHVTLLIIGVMIGYVATAVIGVFKFFSIEEDIRAYVIWGLGSFSRATDSQLSFFAILMLIFIPAGMLLVKQLNLLLLGESYARNLGLNTRRARLLVISSAGLLIAAVTAYCGPIGFLGMAVPHLARVIFHTSDHRILMPATCLIGSALALFCNIIARMPGFEGALPVNSVTALVGAPIIVTVLFRRRRFKEETD
>CP025930.1|AUR49600.1|769338_770478_+|ABC-type-Fe3--hydroxamate-transport-system-periplasmic-component
MRRYSVTFFLSAILFLIGAGCNRTRTQEQKATSAISSDSLHPQYAEGFRLDAGEGCYLLSIEDPQQESHKEYRFALVPKGTYPVIPEGYTAVTIPVERVVCMTTLQLSNFIALDAQSLVAGISSTRYLRDSVMKAQLQDGRTQKIGIEGNFDREVVMSLQPDLILISPFKRGGYDVLEQVSVPLIPHLGYKELTPLGQAEWVKLIGLLTGQYDKACRFFSEIETRYHTLTGYADEVTDRPIVFSGEMRGGNWYAVGGKSYLAQQIRDAGGEYFLKDDQRSGGVSLDFETVYSRSDSARYWRILNSYPGEFGYEALKAEDSRYADFRAFKEKGVIYCNLRETAFYELMPMHPDWVLADLIAILHPRLLPDHQPHFYYLLQ
>CP025930.1|AUR49056.1|781454_783806_+|macrolide-export-ATP-binding/permease
MRTYFKFLSRNKLYTFVTIVGFALSLIFVLLLSFYVRREQQADRIHTDYKRIYQYNVESKNNWSGFICCYPAGTLIREQVPDVEEICRISEYNDKEYIFIGADKQNGLIASHLSVESNFFTFFDGYKLLEGDPKTVLSEQNSAVISSALAARIFGNMSPIGQEISFFDFSKNKQTFRITGIMEPMPDNCHIRPAELLFYQEPKENNYNNGNYALYLKAREGADLTAQLPAVQKAVQGKDVIFAFDEKAEVKLHPLEKCYPEPLFPNEYAMMVQKGNPARTRILIAITLLVLIIAIISYINLTLAQGGSRGNEVALRRLWGSSRLAIVRRLWFESLLLIFLSTLLAVFGMFALEPVFDRLFDTHLYLARHISLTLILLLIGFMLLLSIVCAALPAWFISRFRPIEVVSGKFRRVVKSSFSQIMVISQYAITMILLSCTMVMAVQIDYMTNSDMGYDYRNKLIIDVFGLDPQIVSTMRTEIAKIPGITGIGLTRGTPLNGGNNNSSEYRGRPLSMQIFSIDSVALSLFDLKMKPNGRKADKPDRTLYLSRSAYNDFDVANLPDGVIHWGKAGEFYYCGDAPEVHFGGFKEPHPSYLFIPYPQSSAWSWSVLVGYSEGADPEQLIQSIQAVYSRITGQPYTEILRSEDIIASHSEEERSLSGFLLLFSILALVGTVMSVFAMAALRIRHKQKEIAIRKVVGAREVQILQIIGRRSLWNLLNAFAVATPVSYLVMNRWLQGYTYHADMPWWVFPASLLFVSAVAMLSMLSMAMNAASSNPVDYLKNE
>CP025930.1|AUR49054.1|783844_786214_+|cell-division-FtsX-related-transmembrane-transport-protein
MRTYFKFLSRNKLYTFVTVFGFSVSLMFVILLGFYVQGELSVDNFHSKGDRIYMLRSELHACLSNPAPAYVQELVPEVEAYCRIANADLYIETTDGEKIKTSILLVDSTFFTIFDFKLRTGQPDDVLSLRRSIVLTPETARRFFGNDDPKGRILHDKLTVSGIMEPIPFYSQFPQVDAVVSYDYIEELFGSELLSGWGYFQFSAYFLMKPHTNIQAKAKVLEKIFTGEESPLGLWRSGYAKEVHFVPLKKCYYDPLVITSRFDIRKNDASKVYILLAIVLLILFIAILNYINLTVAQAGFRGKEAAVRRLLGESQKGLIRRYLGESFLITFISFLLGLLLAFMLEPFFDRVLDTRINLISRFTYQTIIVIVSSIVILSFASGLLPSIVISHFKPIEVVKGYFSYRIKSNYSHFLVILQYTVSLILVTCSLIILMQSHFLIHTDLGFRTHGIMLISNNLDSVPQESLRNEIQKIPGVDMVSFSSGNPVNIANNVAFNDDGERAQFTWEMMIDSLFFDFFEIKPKYITQEPREVLFNGDRFRKTHLMPSWATASMVNVVHPDPNTHEFTRGSYKQYDGLTHVMVGILPEIKYRPLNESQDPLLIYPLQRGQYPWTTMVRVRDSIDRKAVEKTILETYKRIGNVDDVKWHWAEDIILDRYKSQTNLSQLISAFALLTVLIMVMGVFAMSLYMIKQKEKEIALRKVNGATVATILAMLNTQSLRRFGIALLIALPVSWWAMDRWLQTFAFHIRLDWWVFVVAALIVLLLSLVSTSLQSWRAACANPVDYLKNE
>CP025930.1|AUR49053.1|786240_788616_+|cell-division-FtsX-related-transmembrane-transport-protein
MLPLKLAARRLFRQGEHSISKLLTLTLGLSVSVLLLSIVIYQRSYERDFPHHDRICIVKTHGTRQSQEGDKPEELDFSQVSGGVAPAIQEEIPGVELATRTTLYGTSKMILEDNKTYETKTLLAEPAFLDMFGVELIAGVRDSALRDNMTCLISESLARKMGGDVLGKRLRPAESKSDRAITIGGVFEDLPHNSSIQADMLLPITWMPAESLNNWIGNDRYIAYVRLRPGVSPESLDEALLEMQKRHQDMEVFRKAGVELHYSLTPFNRLRLEDPTLVNMLRIQQIVAIAVLLISLLNYVLMTLASMVNRRRVAAIRKCYGAMPVQIQGTMIWETFLYIFLSLVLALLTLILFRKPMEALIETPLLHLISWRVAAALAGVLAMATFFMGWIPGYSLSRTPVMNIFRKSVAHNRLWKLGLLAVEFVAATFLFGLLAITGLQYRHMIGQDAGYKAAGLYYVPIESLDQQQLPVVIEKLKALPEVEGYTLTTALPASSGQSGDNLIDPVTDRELINVADLFYVDEHYLKVYDIKLLEGKNFDAATEKDREIMLSKKAATELARLMNWKDGVIGKNIILTSFGRVVIRGVYDDLMLRRQHLSPYPEKLPSAIVYGDDWLHYLTIRLRHDDARLLHRVNGILSEADPYKETSFLSVEMELLSRFEAAKTFRNTILFGSVVAILIALIGLVGYVNTEVNRRRKELAIRKINGAGEGDILRLFLRSIFRLSLPSVLAGLFVAYLFGRNWLEKFSYRIELNGRIFLLVGLFVLLIIALAVVINLRRIARRNPVNELRYE
>CP025930.1|AUR50204.1|788708_789368_+|ABC-transporter-ATP-binding-protein
MIEISNLTKVFRTEEIETVALDGVSLKVDKGEFIAIMGPSGCGKSTLLNILGLLDNPTSGIYKLDGAEVGNLREKDRTAVRKGNIGFVFQSFNLIEEMTVSENVELPLVYLGVKASERKERVEEALRKMSISHRAGHFPNQLSGGQQQRVAIARAVVANPKLILADEPTGNLDSKNGADVMELLRGLNREGATIVMVTHSEHDARSAGRIINLFDGKIR
>CP025930.1|AUR49253.1|789673_791227_-|hemerythrin-HHE-cation-binding-domain-protein
MQVIKTNETFDSLDKSKLERMLDIKEAHREGHLTLEEAKERMKKEVGSISPEEFAAAEQLFKERDQDECQNEDVRTMLQLFEGLINPIRPDLPFGHPIDAYLRENDKAKELLDQADALLERTFIPNPWIELMETLMGYKLHFARKQNQLYSTLEQKGFDRPSTTMWTYDDHIRDEMNKAMSLLREKDYDSFPAAYKEMAIVLRDLMEKEELILYPTSLKLISDKEFEAMKHGDREIGFFLIDMPELDAPAKQSKEAHGQSFMAELGALLAKHGMGTGGQDDKAILDVAEGKLTLEQINLLFRHLPVDISFVDENELVCFYTDTKHRVFPRSKGVIGREVRNCHPPKSVHIVEEIIDKFRRGEQDRAEFWINKPGVFIYIVYVAIRDADGRFRGVMEMMQDCTRIRSLEGSRTLLTWDEEQSPAQGSKESESDTVGEDGIRPDTKLKSLLQRYPRLMDDLPTISSKFTLLRSPMAKVILPVATIKMMSERADIPSDMLIGKLESLIASYNKPDRSEEK
>CP025930.1|AUR49385.1|791710_793066_-|succinate-semialdehyde-dehydrogenase
MEIKEMVSLARKAQKEYQATHNQEAVDNICRAAAKVIYENAAILAREAVDETGMGVYEHKVAKNQGKSKGVWYNLHNKKSVGILNIDERTGMIEIAKPIGVVGAVTPTTNPIVTPMSNIIFALKTCNAIIIAPHPRSKKCSAHAVRLIKEAIAPFNVPEGMVQIIEEPSIEKTQELMGAVDVVVATGGMGMVKSAYSSGKPSFGVGAGNVQVIVDSNIDFEAAAEKIITGRAFDNGIICSGEQSIIYNEADKEAVFTAFRNHGAYFCDEAEGDRARAAIFENGAIAKDVVGQSVAFIAKKANINIPEGTRILVVEARGVGAEDVICKEKMCPVMCALSYKHFEEGVEIARTNLANEGNGHTCAIHSNNQAHIILAGSELTVSRIVVNAPSATTAGGHIQNGLAVTNTLGCGSWGNNSISENFTYKHLLNISRIAPLNSSIHIPDDKEIWEL
>CP025930.1|AUR49619.1|793261_794377_-|succinate-semialdehyde-reductase
MQLFKLKSVTHHFDTFAEFAKEFCLGERDLVITNEFIYEPYMKACQLPCHFVMQEKYGQGEPSDEMMNNILADIRNIQFDRVIGIGGGTVIDISKLFVLKGLNDVLDAFDRKIPLIKEKELIIVPTTCGTGSEVTNISIAEIKSRHTKMGLADDAIVADHAIIIPELLKSLPFHFYACSAIDALIHAIESYVSPKASPYSRLFSEAAWDIILEVFKKIAEHGPEYRFEKLGEMIMASNYAGIAFGNAGVGAVHALSYPLGGNYHVPHGEANYQFFTEVFKVYQKKNPFGYIVELNWKLSKILNCQPEYVYPKLDELLGCLLTKKPLHEYGMKDEEVRGFAESVLKTQQRLLANNYVELTVDEIEGIYRRLY
>CP025930.1|AUR49447.1|794427_795723_-|succinyl-CoA:coenzyme-A-transferase
MKDVLAEYASRIVSAEEAVKHIKNGERVALSHAAGVPQSCVDALVQQADLFQNVEIYHMLCLGEGKYMAPEMAPHFRHITNFVGGNSRKAVEENRADFIPVFFYEVPSMIRKDILHIDVAIVQLSMPDENGYCSFGVSCDYSKPAAESAHLVIGEINRQMPYVHGDNLIHISKLDYIVMADYPIYSLAKPKIGEVEEAIGRNCAELIEDGATLQLGIGAIPDAALLFLKDKKDLGIHTEMFSDGVVELVRSGVITGKKKTLHPGKMVATFLMGSEDVYHFIDKNPDVELYPVDYVNDPRVIAQNDNMVSINSCIEIDLMGQVVSECIGSKQFSGTGGQVDYVRGASWSKNGKSIMAIPSTAKNGTASRIVPIIAEGAAVTTLRNEVDYVVTEYGIAQLKGKSLRQRAEALIAIAHPDFREELTEHLRKRFG
>CP025930.1|AUR50660.1|795728_796013_-|Fe/S-biogenesis-protein
MTEEIVELVLRERISPLLRSHGGDLSLSQIKDKTVFVRFSGACRFCPAAHETVEKIVQAMIREYFKDDNIDVILENSVSDDLLEQAKNILRKPK
>CP025930.1|AUR49306.1|796085_797546_-|4-hydroxybutyryl-CoA-dehydratase
MMTSEQYVESLRKLNLKVYFMGERIENPVDHPMIRPSMNSVAMTYKLAEMDEYKHLMTATSNLTGKQVNRFCHLHQSTEDLKDKVKMQRLMGQKTASCFQRCVGMDAFNAIYSTTYEMDQALGTTYHKRFIEYMKYVQDNDLVVDGAMTDPKGDRGLSPSEQADPDLYLHIVEVREDGIVVSGAKAHQTGAVNSHEHLIMPTIAMREADADYAVSFAVPSDAEGVIMIYGRQSCDTRKMEEGADIDLGNSEFGGHEALVVFDRVFVPNDRVFMCKEYQFAGMMVERFAGYHRQSYGGCKVGVGDVLIGAAALAADYNGVPKASHIKDKLIEMIHLNETLYACGIACSSEGTQMKAGNYMIDLLLANVCKQNITRLPYEIARLAEDIAGGLMVTMPSQQDFRHPEIGPIVKKYLAGATGKSTENRMRVLRLIENITLGTAAVGYRTESMHGAGSPQAQRIMIARQGDLEGKKKLARAIAHIDESLDK

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Crispr_ID: CP025930_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025930_4

902669-902763

Orphan

Consensus_repeat	Method
TTTTTCATTGAAATACCGTTAGTCGATAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025930_4

>merge|CP025930|4|902669-902763|CRISPRCasFinder
TTTTTCATTGAAATACCGTTAGTCGATAGGAATAAAACACACCCACCGGATGCTTTCCGCTCCAGTTTTTCATTGAAATACCGTTAGTCGATAGG

>CP025930|4|4|902669-902763|CRISPRCasFinder
TTTTTCATTGAAATACCGTTAGTCGATAGG	AATAAAACACACCCACCGGATGCTTTCCGCTCCAG
TTTTTCATTGAAATACCGTTAGTCGATAGG

Protein	Signature genes	Signature genes Name	Protein_function
CP025930.1\|AUR49055.1\|899489_901844_+\|monofunctional-biosynthetic-peptidoglycan-transglycosylase	unknown	unknown	gnl\|CDD\|227342
CP025930.1\|AUR49129.1\|897336_899334_+\|fructose-16-bisphosphatase	unknown	unknown	gnl\|CDD\|377726
CP025930.1\|AUR49969.1\|914140_914992_-\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|234599
CP025930.1\|AUR50129.1\|893730_894447_-\|phenylalanine--tRNA-ligase-beta-subunit	unknown	unknown	gnl\|CDD\|225917
CP025930.1\|AUR48948.1\|917702_925202_-\|gliding-motility-protein	unknown	unknown	gnl\|CDD\|275042
CP025930.1\|AUR50387.1\|896206_896743_-\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223707
CP025930.1\|AUR49803.1\|888779_889757_-\|geranyltranstransferase	unknown	unknown	gnl\|CDD\|376322
CP025930.1\|AUR50138.1\|901891_902602_+\|ftsH-interacting-integral-membrane-protein	unknown	unknown	gnl\|CDD\|198414
CP025930.1\|AUR50314.1\|895621_896206_-\|adenylate-kinase	unknown	unknown	gnl\|CDD\|234711
CP025930.1\|AUR49248.1\|907080_908640_-\|NAD-utilizing-dehydrogenase	unknown	unknown	gnl\|CDD\|225307
CP025930.1\|AUR49883.1\|915028_915934_-\|meso-diaminopimelate-D-dehydrogenase	unknown	unknown	gnl\|CDD\|273877
CP025930.1\|AUR50167.1\|889927_890620_-\|ferric-siderophore-transport-system	unknown	unknown	gnl\|CDD\|367555
CP025930.1\|AUR49717.1\|915971_917018_-\|transcription-termination-protein	unknown	unknown	gnl\|CDD\|273891
CP025930.1\|AUR49529.1\|912898_914110_-\|flavodoxin	unknown	unknown	gnl\|CDD\|223503
CP025930.1\|AUR49020.1\|891071_893690_-\|outer-membrane-porin-CarboxypepD_reg-like-domain	unknown	unknown	gnl\|CDD\|372685
CP025930.1\|AUR49005.1\|902766_905544_-\|leucyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|178177
CP025930.1\|AUR50022.1\|912069_912861_-\|glucosamine-6-phosphate-deaminase	unknown	unknown	gnl\|CDD\|179028
CP025930.1\|AUR49393.1\|910715_912065_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|224169
CP025930.1\|AUR49315.1\|908624_910076_-\|tRNA-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|131739
CP025930.1\|AUR49556.1\|894427_895612_-\|GTPase-Obg	unknown	unknown	gnl\|CDD\|237047

Protein	Function_ID	Function_description	E-value
CP025930.1\|AUR49055.1\|899489_901844_+\|monofunctional-biosynthetic-peptidoglycan-transglycosylase	gnl\|CDD\|227342	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane].	1.30165e-132
CP025930.1\|AUR49129.1\|897336_899334_+\|fructose-16-bisphosphatase	gnl\|CDD\|377726	pfam06874, FBPase_2, Firmicute fructose-1,6-bisphosphatase. This family consists of several bacterial fructose-1,6-bisphosphatase proteins (EC:3.1.3.11) which seem to be specific to phylum Firmicutes. Fructose-1,6-bisphosphatase (FBPase) is a well known enzyme involved in gluconeogenesis. This family does not seem to be structurally related to pfam00316.	0
CP025930.1\|AUR49969.1\|914140_914992_-\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|234599	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed.	1.40876e-84
CP025930.1\|AUR50129.1\|893730_894447_-\|phenylalanine--tRNA-ligase-beta-subunit	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	1.89439e-35
CP025930.1\|AUR48948.1\|917702_925202_-\|gliding-motility-protein	gnl\|CDD\|275042	TIGR04189, gliding_motility-related_protein, cell surface protein SprA. SprA is a cell surface protein widely distributed in the Bacteroidetes lineage. In Flavobacterium johnsoniae, a species that shows gliding motility, mutation disrupts gliding.	0
CP025930.1\|AUR50387.1\|896206_896743_-\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	5.89386e-50
CP025930.1\|AUR49803.1\|888779_889757_-\|geranyltranstransferase	gnl\|CDD\|376322	pfam00348, polyprenyl_synt, Polyprenyl synthetase.	1.11145e-84
CP025930.1\|AUR50138.1\|901891_902602_+\|ftsH-interacting-integral-membrane-protein	gnl\|CDD\|198414	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins. This family is comprised of bacterial relatives of the mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. In plants, BI-1 like proteins play a role in pathogen resistance. A characterized prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.	5.62857e-63
CP025930.1\|AUR50314.1\|895621_896206_-\|adenylate-kinase	gnl\|CDD\|234711	PRK00279, adk, adenylate kinase; Reviewed.	2.47643e-85
CP025930.1\|AUR49248.1\|907080_908640_-\|NAD-utilizing-dehydrogenase	gnl\|CDD\|225307	COG2509, COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only].	4.0338e-102
CP025930.1\|AUR49883.1\|915028_915934_-\|meso-diaminopimelate-D-dehydrogenase	gnl\|CDD\|273877	TIGR01921, Meso-diaminopimelate_D-dehydrogenase, diaminopimelate dehydrogenase. This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized.	6.37215e-119
CP025930.1\|AUR50167.1\|889927_890620_-\|ferric-siderophore-transport-system	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	2.2116e-22
CP025930.1\|AUR49717.1\|915971_917018_-\|transcription-termination-protein	gnl\|CDD\|273891	TIGR01951, nusB, transcription antitermination factor NusB. A transcription antitermination complex active in many bacteria was designated N-utilization substance (Nus) in E. coli because of its interaction with phage lambda protein N. This model represents NusB. Other components are NusA and NusG. NusE is, in fact, ribosomal protein S10. [Transcription, Transcription factors].	2.90446e-23
CP025930.1\|AUR49529.1\|912898_914110_-\|flavodoxin	gnl\|CDD\|223503	COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion].	1.68195e-121
CP025930.1\|AUR49020.1\|891071_893690_-\|outer-membrane-porin-CarboxypepD_reg-like-domain	gnl\|CDD\|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	6.32262e-16
CP025930.1\|AUR49005.1\|902766_905544_-\|leucyl-tRNA-synthetase	gnl\|CDD\|178177	PLN02563, PLN02563, aminoacyl-tRNA ligase.	0
CP025930.1\|AUR50022.1\|912069_912861_-\|glucosamine-6-phosphate-deaminase	gnl\|CDD\|179028	PRK00443, nagB, glucosamine-6-phosphate deaminase; Provisional.	2.3937e-162
CP025930.1\|AUR49393.1\|910715_912065_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|224169	COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion].	1.74221e-150
CP025930.1\|AUR49315.1\|908624_910076_-\|tRNA-nucleotidyltransferase	gnl\|CDD\|131739	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase. The enzyme tRNA adenylyltransferase, also called tRNA-nucleotidyltransferase and CCA-adding enzyme, can add or repair the required CCA triplet at the 3'-end of tRNA molecules. Genes encoding tRNA include the CCA tail in some but not all bacteria, and this enzyme may be required for viability. Members of this family represent a distinct clade within the larger family pfam01743 (tRNA nucleotidyltransferase/poly(A) polymerase family protein). The example from Streptomyces coelicolor was shown to act as a CCA-adding enzyme and not as a poly(A) polymerase. [Protein synthesis, tRNA and rRNA base modification].	7.78619e-98
CP025930.1\|AUR49556.1\|894427_895612_-\|GTPase-Obg	gnl\|CDD\|237047	PRK12298, obgE, GTPase CgtA; Reviewed.	0

>CP025930.1|AUR50138.1|901891_902602_+|ftsH-interacting-integral-membrane-protein
MNFNELNNQSTVYVDSTLQTTTMRHVFTWMFGALGITALTAMLVAKSSLIYTMIMNSGLLWGLIIAELALVFILSARIGKMSFFTSSLLFTIYSILNGVTLSSIFIVYTMTSIAATFFITAGMFGAMALWGYFTKKDLSKWGSIFFMLLIGLILATVVNLFLRSGAMGFIFSIVGVIIFTGLTAFDVNKIKQMLAQTQGFEEGDVVRKVALMGALTLYLDFINLFLYLLRFFGRRD
>CP025930.1|AUR49055.1|899489_901844_+|monofunctional-biosynthetic-peptidoglycan-transglycosylase
MSKLTNKIVRILWTVFIAGWAVIGILFLFIATGMIGYMPPIEHLQNPIDKYASQLISADGKVFGSYAHSGDNRIYTRYNEISPDLIKALIATEDVRFRKHSGIDSKGLFRAVVKRGILNQKSGGGGSTITQQLAKLLYSPRTETKLGRLFQKPIEWVIAVKLERFYTKEEIITMYLNYFDFLYNAVGIKSAAYTYFGKQPADLKIEEAAVLVGMCKNPAYYNPVLHGETERCRGRRNIVLEQMYKAKYITKAECDSLQKLPLVTSFHRITHRDGEAPYFRERLRQVLMAKKPERKNYLAWQDDQYRADSIAWETDPVYGWCNKNKKADGSNYNIYTDGLKIYTTIDLRMQQYAEEAMVKQMKEVLQPIFDKEKRGRSYAPFSRDITSDEQRSILLRAMKQTDRWREMKKAGISESEIRASFNKKRKMQVWNWRGTIDTVMSPLDSIKYLKGILRTGFMAMNPHNGHIKAYVGGINFRNFQYDMVSQGRRQVGSTIKPFLYSLSMLEGISPCDEMLHVSQTLFTESGKAWTPKNAGARRTGEMVSIKWGLQNSSNWVTAYLMGRTSPYTFVRLLRSYGLSGYLEPSLSICLGTPDVSVQEMVSAYTTFVNKGIRVNPLPITRIEDQYGNVVAQFSPNMVEVLPPDAAYKMLYMLKSVVDGGTGSRLRYRYGFKLDMGGKTGTTQNNSDGWFVGFTPSLVAGCWVGGEDRSEHFDSMSNGQGAASALPIFAEFLKRVYADPKLGYTTEEKFEFPQDFQPCMMDQNVEYFDAGGGEVVEPLPEILVE
>CP025930.1|AUR49129.1|897336_899334_+|fructose-16-bisphosphatase
MANDKTQTVQMLKHDLDYLELLSESFPTATEVATEIINLEAILNLPKGTEHFLADIHGEYEAFIHVLKNASGSIRRKVDEVFGGQLRQNQKRELCTLIYYPREKLELVKQSDERMEDWYMVTLNQLIKVCQKAAEKYTRSKVRKTLPPKYSYIIQELLHEDGVNPNKSAYISSIFSSIISTGCADDFIIAISETIQRLVIDHLHVVGDVFDRGPGAHIIMDTLMKYHHFDIQWGNHDMLWMGAAVGNASCMANVVRIALRYANLDTLESGYGINLLPLARFAMDTYADDPCTVFKPKLAQADQTYDDKSVYLISQMHKAISIIQFKLEHQIIARHPEYKMDNRDLFHLVNFTDGTIKLSSGVYPMLDMNFPTVDPADPYALTEQEQNIVDRLMGCFMRSEKLQNHLKCLYRHGSMYLTYNMNLLYHASIPLNKDKSLKKVRVGDKTYAGRELLDKVEEMIRTAYVAPEKSDQRLAAVDYMWYLWCGPDSPLFDKAMMTTFERYFIEDKATHHEEKGYYYVYRQEKAVCEMILKEFGLEGPDTHIINGHVPVKAKKGELPIGAEGKLMLIDGGFSKAYQSSTGIAGYTLIFNSQGLHLVQHEPFSSTRKAIEEMEDIKSITVVREVTSHRMLVKDTDNGHLLSKQVENLKKLLQAYSYGLIKERKK
>CP025930.1|AUR50387.1|896206_896743_-|hypoxanthine-phosphoribosyltransferase
MRTIKLKDKEFEIYIPATRIHEAIKRMAAEIKRDLHEDNPLFVCIMNGSFMFAAELMQALDESYQVDFARYSSYCGMQSTFVLKEIMPVTADMRGRTVVIVEDLIDSGYTMSCVKENFYELGAKEVRIAAMLTKPAALKCDIHTDYVGLEIGNDFIVGHGLDYDDLGRMYQDIYKIKE
>CP025930.1|AUR50314.1|895621_896206_-|adenylate-kinase
MLNVLIFGAPGSGKGTQSEELIRRYGFRHISTGELLRAEIKAQTELGQAAAGYINEGHLVPDSLIVDMMEKLISTLVDTEGIIFDGFPRTIPQAEAMETMLAHHGWKVDIVLNLQVPEEMLIERLLNRGKISGRSDDNIETIRKRLDVYANETAPLVDFFTRKNVLHNVVGTGTIEEIALRIAPIVDKFRKVSN
>CP025930.1|AUR49556.1|894427_895612_-|GTPase-Obg
MAAESNFVDYVKIYCRSGKGGRGSTHFRREKYIPKGGPDGGDGGRGGHVFLRGNRNYWTLLHLRYDRHIMATNGQSGGAKRSTGANGEDRIIEVPCGTAVYDADTGEFITDITEHGQQVMLLQGGRGGHGNTFFKTATNQAPRYAQPGEPAQERMVIMQLKMLADVGLVGFPNAGKSTLLSVLTAAKPKIANYPFTTLEPNLGIVAYRDKRSFVMADIPGIIEGASSGKGLGLRFLRHIERNALLLFMIPADTDNIAKEYEILSRELVAYNEELAQKRKVLAITKCDLIDEELCEMLREELPTGLPVVFISAVAQQGLEELKDTLWKELSKETLHEPDSIVRQALDLTSLTWDEEDDLFPASIEDDEDEEGLDDIDFDLEIEYDNEGDDAPDQL
>CP025930.1|AUR50129.1|893730_894447_-|phenylalanine--tRNA-ligase-beta-subunit
MHRISFDVPILHHCPAFRVGVVTAKVAAGRSPSTLIDEMNREADRLIQTCDLPAIKEIPAIAATRSCYKRTGKDPNRYRPSAEQLSRRVVRGLGLYYINALVDIGNLLSLRTGYSIGVFDRDKVGSDIVFGVGYADEPFVGIGRGELNIEGLPVYRDENGAFATPTSDHERTSVDDITKNTLIFINDFGVDRTHSDCLEEAVAEAVRLLKLYAGASDISTQIVSAEDGADPVFLTIPH
>CP025930.1|AUR49020.1|891071_893690_-|outer-membrane-porin-CarboxypepD_reg-like-domain
MSAISRKSALSLFFLSLFLLGMLPLAGQTRFAGVVLDSATLEPIPYASVFCADNKGVGTVTSAAGMFDLTSPHNDRTIIISSTGYRKQTFSLRSSEKRNMHCRILLASEELQLSSVVVKAKRRKYSKKNNPAVDLIRKAIAAKDNNRIESAPAYSYRTYERILVSDDDFRSDEGFLHLKHEQCAQWADSSRFTDRRILPLSMREKLIQTERLPNKGERTRVLARRLDGVDEKLDEGPLTTNLEEIFRPINIYDNDIPIMLSRFPSPMSSTFATSFYKYFIADTVRIEDEDCIEMIFSPFNPESAGFTGRLWIVKSDYSLRRIILNLPISSNVNWVTHLRIAQDFQRVPCIDVSGQTTRYYRVLKRQDFQALLSATSFIPQGLEVEQSRILSDYRIGEGSIGRDPSSVGFLATDSVYDAAAPRETDGYWNVMRPEPLPSTGKKLLSFMHYLRNDRTFKASTTIAKTLLTGYLGFPIAMNDSIRPKFDFGPVHTLFGGNKIEGFRMRVGGMTLAALNPHFFAQGYIAYGFKDKRWKWRGALTYSSIPKKLYMQEFPHRNLSFIASYDLYTPGQVVDPIFKDNITVILGTMNNLRRSYVEEYRLEYDRDWGPDFSTIIWGSHRRDEPTGTLRYDQVEADGTIRPIHSYRATELGLTLRYEPGRIPYNGRKGPNTAFNVVRRSPVFELEHRMAFSGLFGGDFGYQRTEFRYKHHIWLSLFGMLDASVRAGQVWTHAPYPLLEIPPVNESYTLQSGAFQLMEPLEFIADRYTQFHLTYHLEGLMLNRIPLIKRLAWRELISFHGMWGDLTPHNKPGSVGSFLFPENTIPMNHTWYMEGSIGLENIFRLLRIEYFRRFTQLQTTPNKWGVRARFQITF
>CP025930.1|AUR50167.1|889927_890620_-|ferric-siderophore-transport-system
MEIKKSPKADLEKGKGLNFLLGLVVALAIVYVALEYRTYDKIEAYTRDKVDIADMEETILLEENEPEPEQPEPEQPQQQEVQLPEEFKVVDNTQKVEKIALVSVDESKPLPPPAPVAPVKVEEEEDKIHEVVESPAEFPGGYTALSKWLSKNLVYPEQAAEMGIQGKVIVRFVVEKDGSVTQATVVKGIDPALDKEALRVIQTMPKWKPGMQQGRAVRVRCTQPVQFKLQ
>CP025930.1|AUR49803.1|888779_889757_-|geranyltranstransferase
MHTFEDLREIIEQEIASQPYDQRKPDGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPALEVAMAIETYHNFTLLHDDLMDKSSMRRGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVDSRLLPVLLPLFNRMAMEICQGQQYDMDFERRDFVAEDEYLEMIRLKTAVLLATALKMGAIAGGADIEKADILYRYGIHIGLSFQLEDDLLDVYGDPIILGKKIGDDIACNKKTMLLIKALEIAQGEELNLLRESLLMPDVQCEEKIRAVTGIYNRLGIRPIVEDLIDYHNGLAEKALDELGLDEITTKPLRELIGTLRNRKS
>CP025930.1|AUR49005.1|902766_905544_-|leucyl-tRNA-synthetase
MEYNFQEIEKRVQGQWRKDKVYRVAEDTSKKPFYVLDMFPYPSGAGLHVGHPLGYIASDIFSRYKRLRGFNVLHPMGYDAFGLPAEQYAIQTGQHPEKTTEENTARYREQLDKIGFSYDWEREIRTCDPNYYKWTQWAFLKMFDSYYCNQAQQARPISELIEVFARQGNEGLNVACGEGVRFTAEEWTAMSEKEQQEILMNYRLAYLGDTMVNWCPALGTVLANDEVKDGVSERGGHPVEQKKMRQWCLRVSAYAERLLHDLETLDWTESLKETQRNWIGRSEGAEMEFRLAGKDCTFTIFTTRADTIFGVTFMVLAPESELVEEVTTEEQRAAVETYLTETKRRTERERISDKRVSGVFSGSYAINPLTGKEIPIWISDYVLAGYGTGAIMAVPAHDTRDFAFARHFDLPIVQVVVPEGETATDPATWEDAKDSKSGIMVNSDFLNGLSVEDAIAQTKEYIREKHLGCVKVNYRLRDAIFSRQRYWGEPFPIYYKEGMPHALDEDRLPLRLPEVDKFLPTESGEPPLGRATGWHTAEGYPYELSTMPGFAGSSAYYLRYMDPQNDTALVSRSANEYWRHVDLYIGGTEHATGHLIYSRFWNKFLFDLGIVCEAEPFRKLVNQGMIQGRSNFVYRIKNTNTFVSYGLREQYEVTPLHVDVNIVSNDQLDIDRFRAWRPEYASAEFILEDGKYICGWAIEKMSKSMFNVVNPDDIIARYGADTLRLYEMFLGPLEQSKPWDTNGIDGVHRFLKKFWALYYNADGIRVTDTAPTKEELKSLHKLIKKVGQDIESFSFNTSIPAFMICVNELTAAKTTSRAILCPLLTVLSPFAPHITEWLWQELGVEGSIVTATWPEYNEEYLVESCVRYPVSFNGKVRFNIELPADMSKKDVEQAALTAPEAARWLEGKSPKKVIVVPGRIVNVVV
>CP025930.1|AUR49248.1|907080_908640_-|NAD-utilizing-dehydrogenase
MPQRIDLRVRPEEATDEQILRKHVARQTKTDPTDIHTIIIRRRSIDARQRQVYVNLGLEVYSGSESPVEDDFSDLIYPSVEGKTAVIVVGAGPAGLFAALRLIELGLRPIILERGKSVHERKADIARIPKEGHVDPESNYGFGEGGAGAFSDGKLYTRSKKRGDITKILRILCKHGAQPSILIDAHPHIGTDRLPKVIENIRHQILAAGGEVHFSCRMESLIIHNGQVVGARDNKGREYCGPVILATGHSARDIYRYLHRNGIRMEAKGTAVGVRLEHPQALIDQLRYHNPKGRGLYLPPAEYTYTAQVEGRGVYSFCMCPGGFVVPASTAPDQTVVNGMSPANRGSRWANSGLVVEIHPEDVLSTPTNDPLALMNWIERLEGESWTQARCSLRAPAQRMTDFLSGRSSVDLPKSSYNMGLTPSRLDEWLPSFITKRIQKAFQLFDRQTKGFLTAEAQLIALESRTSSPVRILRESTSCEHPLLRGLFPCGEGAGYAGGIVSAAMDGERCAEGVASYLG
>CP025930.1|AUR49315.1|908624_910076_-|tRNA-nucleotidyltransferase
MTDKELILSKIDIPIFRLIAEVADQLGLETYVVGGYVRDIFLNRPSKDIDIVAVGRGIDLAKAVAKKLGRKAHLSVFANFGTAQVKHGDLEIEFVGARKESYRHDSRKPIVEDGTLEDDLRRRDFTINALAVCLNSDRFGDLVDMFDGLCDMDDMLLCTPLDPDITFSDDPLRMMRAIRFASQLPGFTILPRDFEAIQRNAHRIKEAVSAERVIEELNKIMLSPRPSIGLSLFEETGLMEYVFPELLALKGAETRDGIGHKDNLTHTYKVVDNLARHSDSLWLRWAALLHDIGKPRTKKFVGGQWTFHNHNFVGAKMLPSLFKRLRLPLDAKLKYVQKLVDLHMRPAALVDEGVTDSAVRRLLFEAGDDIDDLMMLCEADITSKNPDKVRKYIDNYALVRHKFKEIEEKDHVRNFQPPISGEEIMQTFGLKPSRHVGTIKEAIKEAILDGAIPNDYEAARVFMIEAAASLGLHPKNQTSCHSV
>CP025930.1|AUR49393.1|910715_912065_-|dihydrolipoyl-dehydrogenase
MRYDLAIIGGGPAGYTAAERAAKGGLKTLLIEKNALGGVCLNEGCIPTKTLLYSAKVLHQIATASKYAVSGTADGLDLGKVIARKGKIIRKLTAGIRSRLTEAGVEMVTAEATVMGCDADGIIGITAGEAQYKAANLLLCTGSETFIPPIPGVEQTEYWTNREALQNKEIPTSLVIIGGGVIGMEFASFFNGIGTQVHVVEMLPEILNGIDPEHAAMLRAHYEKEGIKFYLGHKVTSVRNGAVTVEYEGETKEIEGERILMSVGRRPVLQGFESLGLELAGKGVKTNERMQTSLPNVYAAGDITGFSLLAHTAVREAEVAVDQILGKTDETMSYRAVPGVVYTNPEVAGVGETEESLRKAGRAYTVRRLPMAFSGRFVAENEQGNGECKLLLDEENRLIGAHLIGNPAGELIVTAAMAIETGMTDRQIERIIFPHPTVGEILKETLAGG
>CP025930.1|AUR50022.1|912069_912861_-|glucosamine-6-phosphate-deaminase
MRLIIEPDYDKLSTWAADYVIERIHKAAPTAEKPFVLGLPTGSSPIGMYRELVKACKEGCISFRHVITFNMDEYVGLATEHPESYHSFMHRHLFDHIDILPQNIHILNGNAPDLTAECDAYERAIEAAGGIDLFIGGIGPDGHIAFNEPGSSLTSRTRIKTLTTDTVLANSRFFDNDTNQVPKRALTVGVGTIMDAREVMILVNGHTKARALREAVEGAVSQMWTITALQLHRQSIIVCDEAACVELKVGTYNYFKDIERNNL
>CP025930.1|AUR49529.1|912898_914110_-|flavodoxin
MMYQVPQVTDSVYYVGVNDRSKSLFENMWPLPYGVSYNSYLVVDEKVALIDTVDVCYSEIFFKKLDTVLKGRPIDYLIVDHMEPDHSGSIGLLRQRYPNMQIVGNKKTHGMLEGYHHITEGLLEVKEGDKLSLGKNELTFIFAPMVHWPEVMFTYMPTQQVLFSADAFGTFGTLDGHIFDKDMDLSFRWEEMYRYYACIVGKYGSFVQKVLTKFKEANLPVQYICSTHGPVWTLAHFSEAFDLYDRMSRYEAEEGAVILYGTMYGNTEVLADTIAQGIAAGGIRNVVCHNVAFSPASNILRDIFKYKAVIIGSPTYSNEIFSPIKNIMEMIRLREVKDRYLSVFGSFTWAGQAVKKIVPFAEEMGWEMVGEPLEQKMSTTDELYEKGWELGNKIAERLKADRQ
>CP025930.1|AUR49969.1|914140_914992_-|prolipoprotein-diacylglyceryl-transferase
MTLPAFITWDFDPVLFTLFGHPIVWYGLLFALGLIILGPWIEKKMWEHEKLDSKWFESLAVYVFVGTIVGARLGHVLFYDPAYYLANPAKIFVTWEGGLASHGGTIGIIIACWLYSRRVTRKSILWVLDRLAVPTGIVAAMIRLGNLTNSEIFGRPTTLPWGFRFIRSEEYRHLVPNMDMGCHPTQIYEALCYLAVFALCMWLYWKRDAARRYSGLIVGVFLTGIFLSRFIIERIKIVQEPWELKLIESVGLNMGQLLSIPFVLAGIWLIIRAVKNPITQKLS
>CP025930.1|AUR49883.1|915028_915934_-|meso-diaminopimelate-D-dehydrogenase
MTDDKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPDEVPFELRPFRVVSDIEQLESVDVALVCSPSREVERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAAVIASGWDPGSDSVVRTLMQAIVPKGITYTNFGPGMSMGHTVAVKVIDGVKAALSMTIPLGTGVHRRMVYVELLPGHNLEEVSAAIKADEYFVHDETHVIQVDDVDALIDMGHGVHMVRKGVSGSTQNQRMSFDMEINNPALTGQVLVCAARAAMRQQPGAYTLQEIPIIDLLPGDREQWIGKLC
>CP025930.1|AUR49717.1|915971_917018_-|transcription-termination-protein
MINRALVRSRVLQQAYVYYHRDDADIQSAEKELLNSLEQTYDLYLYYLLLVPELTRLHAEALEANKNKHLATEKDKNPNLRMVRNRLAEKIESCRPLWVRAEQNALNWRSEEAFLRRLLKKIHLSEIFTRYMRSDATDDFEADRLFWNELMRDIILPDEELAEVMEEQSIFWDNQIQLIEKIETEEAPDIEEVEQSVRQAVADGNYQTIRQENAPIEIVKEFVLKTIRRIEQDTDPSAILLPAYKEKDDAVFGTTLLRNAIINGQEYRHIIRENLINWEVDRIADMDMLIMQLAITELLHFPNIPVLVTINEYIDLSKLFSTPKSGTFVNGLLDAVVKSLREKGKLLK
>CP025930.1|AUR48948.1|917702_925202_-|gliding-motility-protein
MEKKNKPIRLLAALLPIIAGLVLVTWRPASGSVPARTAINNHYTTPTPADTTRFPVKKTQAKDYRYLDGNYPLDLKTPDNIRTEFIYDEKTNTYLLVTKLGDKPLGSPIPFTPEEYLRYMQRDSIRRYFMEKERLEAQQEGKKRFNPLEMSFDLGPAEKLFGPGGVKLRTQGSAEVAMGAKSNATNNPSLPENARKHSYFDFSEKIQTNVQASVGTKLNFGMNYNTESTFDFDAKKLKLAFEGEEDDIIKLIEAGNVSMNTRNTLIRGGASLFGIHTKMQFDKLDVDMVVSQQEAETKRVNTKGGAQTTPFELSAGQYDESRHFFFGHYFRDRYDGAMKTLPFISSGVKINRVEVWVTNKKGNFDNTQTRNIVAFTDLGEPEKIALPSVSPSMATNGLPANQANSLYPLLVSMPNLRFIDQVTQELSGIMQGGRDYEKVESARLLNPADYTVNSILGYISLNMRLSADEVLGIAFEYTYNGQVYQVGEFSTDRPDNSTENLYVKLLKGTAMSSTSPYWHFMMKNAYQLGGGVYNVQKEKFKLNVFYQSDSAGVYQPYISEGKIKGQLLLRVLGMDRLDAKQEPYPDGTYDFVDGYTILPQKGVVILPTVEPFGKTLADAFGDPVLAKKYCFQELYDTTAVAAQQVAEKNKFIFRGEYKASSGGDISLGAINVTPGSVVVTAGGVKLTENVDYTVDYLSGNVSIINEAILSSGTPINVSLENRGLMNMQRKTMFGIDLNYNFSKDFTLGGTFMHLSEMPLTTKSVIGDESLKNTLWGLNLNYRTQAQWLTNALDLLPFVELTKPSEITVNAEFAHLIPGHYQSKYAQGNSYLDDFESSQSYIDLMNPYSWMLSSTPFQDGAGPVLFPEASLTNDIDYGKHRAKLSWFYIDPIFTRENSAGMPAHLKNDLEQLSNHYVREVKTSELFPYRDQTYNMNSYLHTLLMSYYPSERGPYNLNTVDMQSDGHLANPQSNWGGIMRKIDQSDFEASNIEYVEFWLLDPFIYNKETAKGGSMYINLGEISEEVLKDEKKFFENGMPINDDPAAIETTVWGKVPKRQGTGYAFDNTAGARPKQDVGFNGLTTAEEKDFPTYTEYISRLASIVSPDVLNQWSTDPFSPINDPGGDNFHHYRGADYDEARKSILDRYKQYNGVEGNSAEATNNITGYNVSSRLVPDVEDINQDNTLNEIEKYFQYRVELHPSKMVVGQNYIVDSRTKEVELRNGKKETITWYQFKVPVREFERKIGGITDFKTIRFMRVYLTNFSEEVILRFGTFKLVRGDWRQYERELHPANLTPISNAKLEVSTVNIEENGDRKPVNYVLPPGVLRSLDPQQAQSTQQNEQSMSLKVRTLAPGDARAVYKNTGYDLRRYKRLQMFTHAERLQDEDGTHTGNGDLSVFIRLGTDYRNNYYEYSIPLRLTPFGTYSTNSESDRETVWPKENMFDFKLSALTDIKTKRNREKAAGNPAADFYRLFSEPDPENTGNTVSVMGNPTLSEVKTIMIGIRNNSTDIRSAEIWVNELRLTDYDEKGGWAANTTINMQLSDLGSVNMRGQMITAGFGALDESLTQRAIEDTRTLNFSTNLELGKFFPEKAQISIPFYYSVSDEKVSPQYNPFDQDILLKDALDALPDKSSRDSLSRLSENRMTTHSLALNNIRVNVKSKHPMPYDPSNFSFNYSYNKSERHNPDMEYNTDLKWSAGMVYDYSPLLKPIKPFAKIKKAGAYLKGLAINPLPSKITFQTNMQRSYSEEQVRNFAYGVDQAEKLPVTFMQNFVWDRALAVNWNPINSLRINFRSGTNARIEEPHVQVNKKLAPDEYKIWRDSVRRSIAELGTPIAYDQTFNVSYTLPTAQISALNWVNGSLTYNAVYNWDRGAKTTTEQIIGNTIRNQMTLELPLQLNLTSLYRKSAFLKRIEQHITNPEKKDPVKKAAQPLTKKIRLLPDSTVTLTHTFASKKVRVSALGPDGKMYPLKTKIKDKNTIVILNNDSIEINVTVTPPRQNGSTPAFGAIGERMVYALMMLKSIILNYRQSSGLHLPGFLPNIKAAGGQGSVDGVLAPGWDFAFGLTGEDFVEKAAQKGWLIGGQQNVSPSVYSESNSFEIKMTLEPIHELRINLTANRTDTRQTQTQYVYAGMPRTYGGNFVMTTIGLKGMFSSSSGATGYASQAFNQFLHNREIIAGRIMAQYHGATYPSSGFMEGSSLAGQPVSLETSAVSLNSADVLIPAFLSAYTQRSVGKIGLSAFPSLSSILPNWNVSYTGLSKTELLKKYFRNVRINHAYRGIYNVDSYSSYLGWVGLTDGSNLGFIQDPSDPSTLTPVASMPFDIPFVRLEDSFAPLLGVEVTFMSGLGINTDYRKTRRLNLNLSAYQLVESNEDQITVGMSYKAENFAKLIGLQRTRPTRKAKGGQKNNETMAPRTGGALTLRVDYAYSRTLTLIRKIQDAYTQATNGNISHKINVSADYDISRMLTLRAYYDWDMNHPLVSSASFPITNSNFGVSFRFNLTQ

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Crispr_ID: CP025930_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025930_5

1410859-1411687

TypeVI-B2,TypeVI-B1

VI-B1

Consensus_repeat	Method
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	PILER-CR
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	CRISPRCasFinder
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	CRT

12 spacers

cas13b,Csx27

The CRISPR arrays of CP025930_5

>merge|CP025930|5|1410859-1411687|PILER-CR,CRISPRCasFinder,CRT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACGCTAAGACACTTCTTCGTTATTGCTACTAAGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACCGAACTCTAACAAAACAAATTCTTGATGAAGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACGTAGGCTCTTTGTGCCTCTACGCCATCTCCGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACTTTCAGTATGATAATAAAAATACAGCATGGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACTCCCGCAACGGGGACAAAATAGCGAATCATGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACAAAGAAACGCCCGTGCGGCAAAAACGAAGAGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACAGGTGTAGCATTCTTTAATGAAGATAGAAAGTGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACAAACAATACAAACAACAAATATTATGACAAGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACAATAATGTAGTTGGGTCAGTGGCTTCGGTAGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACAAAACTAGAAGCATTAGAAACCACTCTAAAGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACTTCAAATAAGCACGATATAATGGAACAATTGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACAAAACTAGAAGCATTAGAAACCACTCTAAAGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC

>CP025930|5|1|1410859-1411687|PILER-CR
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	GCTAAGACACTTCTTCGTTATTGCTACTAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	CGAACTCTAACAAAACAAATTCTTGATGAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	GTAGGCTCTTTGTGCCTCTACGCCATCTCC
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TTTCAGTATGATAATAAAAATACAGCATG
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TCCCGCAACGGGGACAAAATAGCGAATCAT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AAAGAAACGCCCGTGCGGCAAAAACGAAGA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AGGTGTAGCATTCTTTAATGAAGATAGAAAGT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AAACAATACAAACAACAAATATTATGACAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AATAATGTAGTTGGGTCAGTGGCTTCGGTA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AAAACTAGAAGCATTAGAAACCACTCTAAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TTCAAATAAGCACGATATAATGGAACAATT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AAAACTAGAAGCATTAGAAACCACTCTAAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC

>CP025930|5|5|1410859-1411687|CRISPRCasFinder
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	GCTAAGACACTTCTTCGTTATTGCTACTAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	CGAACTCTAACAAAACAAATTCTTGATGAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	GTAGGCTCTTTGTGCCTCTACGCCATCTCC
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TTTCAGTATGATAATAAAAATACAGCATG
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TCCCGCAACGGGGACAAAATAGCGAATCAT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AAAGAAACGCCCGTGCGGCAAAAACGAAGA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AGGTGTAGCATTCTTTAATGAAGATAGAAAGT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AAACAATACAAACAACAAATATTATGACAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AATAATGTAGTTGGGTCAGTGGCTTCGGTA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AAAACTAGAAGCATTAGAAACCACTCTAAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TTCAAATAAGCACGATATAATGGAACAATT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AAAACTAGAAGCATTAGAAACCACTCTAAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC

>CP025930|5|1|1410859-1411687|CRT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	GCTAAGACACTTCTTCGTTATTGCTACTAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	CGAACTCTAACAAAACAAATTCTTGATGAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	GTAGGCTCTTTGTGCCTCTACGCCATCTCC
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TTTCAGTATGATAATAAAAATACAGCATG
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TCCCGCAACGGGGACAAAATAGCGAATCAT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AAAGAAACGCCCGTGCGGCAAAAACGAAGA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AGGTGTAGCATTCTTTAATGAAGATAGAAAGT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AAACAATACAAACAACAAATATTATGACAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AATAATGTAGTTGGGTCAGTGGCTTCGGTA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AAAACTAGAAGCATTAGAAACCACTCTAAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TTCAAATAAGCACGATATAATGGAACAATT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	AAAACTAGAAGCATTAGAAACCACTCTAAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025930.1\|AUR49775.1\|1406236_1407244_-\|cobalamin-biosynthesis	unknown	unknown	gnl\|CDD\|273466
CP025930.1\|AUR49610.1\|1398893_1400021_+\|galNAc-alpha-(1-4)-GalNAc-alpha-(1-3)--diNAcBac-PP-undecaprenol-alpha-14-N-acetyl-D-galactosaminyltransferase	unknown	unknown	gnl\|CDD\|340847
CP025930.1\|AUR49941.1\|1416803_1417676_+\|phosphoserine-phosphatase	unknown	unknown	gnl\|CDD\|319803
CP025930.1\|AUR49425.1\|1409318_1410638_-\|cobyrinate-ac-diamide-synthase	unknown	unknown	gnl\|CDD\|234896
CP025930.1\|AUR50649.1\|1423543_1423846_-\|DNA-binding-helix-turn-helix-regulator	unknown	unknown	gnl\|CDD\|378935
CP025930.1\|AUR49288.1\|1407236_1408733_-\|cobyric-acid-synthase	unknown	unknown	gnl\|CDD\|234838
CP025930.1\|AUR49355.1\|1400163_1401549_+\|Fe-dependent-oxidoreductase-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|341466
CP025930.1\|AUR49505.1\|1421878_1423114_+\|bacteriophage-integrase	unknown	unknown	gnl\|CDD\|271185
CP025930.1\|AUR49698.1\|1405200_1406262_-\|cobalamin-biosynthesis	unknown	unknown	gnl\|CDD\|377002
CP025930.1\|AUR49997.1\|1417915_1418737_+\|L-lactate-dehydrogenase-Fe-S-oxidoreductase	unknown	unknown	gnl\|CDD\|223325
CP025930.1\|AUR50277.1\|1402264_1402870_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379447
CP025930.1\|AUR48971.1\|1411694_1415102_-\|hypothetical-protein	cas13b	cas13b_CAS_V-B1	gnl\|CDD\|380475
CP025930.1\|AUR50460.1\|1420801_1421275_-\|thioesterase-family-protein	unknown	unknown	gnl\|CDD\|239527
CP025930.1\|AUR49706.1\|1402953_1404009_+\|ADP-heptose--LPS-heptosyltransferase-2	unknown	unknown	gnl\|CDD\|340821
CP025930.1\|AUR50593.1\|1423128_1423494_+\|virulence-protein-RhuM-family	unknown	unknown	gnl\|CDD\|226452
CP025930.1\|AUR50315.1\|1420106_1420691_+\|lactate-utilization-protein-C	unknown	unknown	gnl\|CDD\|224473
CP025930.1\|AUR49370.1\|1418733_1420101_+\|L-lactate-dehydrogenase-Iron-sulfur-cluster-binding-subunit	unknown	unknown	gnl\|CDD\|224062
CP025930.1\|AUR50491.1\|1403992_1404445_+\|S4-RNA-binding-protein	unknown	unknown	gnl\|CDD\|224108
CP025930.1\|AUR50343.1\|1408729_1409296_-\|cob(I)yrinic-acid-ac-diamide-adenosyltransferase	unknown	unknown	gnl\|CDD\|376665
CP025930.1\|AUR50131.1\|1415098_1415815_-\|hypothetical-protein	Csx27	-	unknown

Protein	Function_ID	Function_description	E-value
CP025930.1\|AUR49775.1\|1406236_1407244_-\|cobalamin-biosynthesis	gnl\|CDD\|273466	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see pfamAM:pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin].	2.71782e-115
CP025930.1\|AUR49610.1\|1398893_1400021_+\|galNAc-alpha-(1-4)-GalNAc-alpha-(1-3)--diNAcBac-PP-undecaprenol-alpha-14-N-acetyl-D-galactosaminyltransferase	gnl\|CDD\|340847	cd03820, GT4_AmsD-like, amylovoran biosynthesis glycosyltransferase AmsD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.	2.44547e-115
CP025930.1\|AUR49941.1\|1416803_1417676_+\|phosphoserine-phosphatase	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	5.67007e-59
CP025930.1\|AUR49425.1\|1409318_1410638_-\|cobyrinate-ac-diamide-synthase	gnl\|CDD\|234896	PRK01077, PRK01077, cobyrinate a,c-diamide synthase.	9.57416e-176
CP025930.1\|AUR50649.1\|1423543_1423846_-\|DNA-binding-helix-turn-helix-regulator	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	4.39407e-11
CP025930.1\|AUR49288.1\|1407236_1408733_-\|cobyric-acid-synthase	gnl\|CDD\|234838	PRK00784, PRK00784, cobyric acid synthase.	0
CP025930.1\|AUR49355.1\|1400163_1401549_+\|Fe-dependent-oxidoreductase-alcohol-dehydrogenase	gnl\|CDD\|341466	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction is 50-fold lower than that in the forward direction. The NADH-BDH has higher activity with longer chained aldehydes and is inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases. This family also includes E. coli YqhD enzyme, an NADP-dependent dehydrogenase whose activity measurements with several alcohols demonstrate preference for alcohols longer than C3. The active site of YqhD contains a Zn metal, and a modified NADPH cofactor bearing OH groups on the saturated C5 and C6 atoms, possibly due to oxygen stress on the enzyme, which would functionally work under anaerobic conditions.	1.58689e-177
CP025930.1\|AUR49505.1\|1421878_1423114_+\|bacteriophage-integrase	gnl\|CDD\|271185	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain. IntN1 is a tyrosine recombinase for the integration and excision of Bacteroides mobilizable transposon NBU1 from the host chromosome. IntN1 does not require strict homology between the recombining sites seen with other tyrosine recombinases. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.65373e-54
CP025930.1\|AUR49698.1\|1405200_1406262_-\|cobalamin-biosynthesis	gnl\|CDD\|377002	pfam03186, CobD_Cbib, CobD/Cbib protein. This family includes CobD proteins from a number of bacteria, in Salmonella this protein is called Cbib. Salmonella CobD is a different protein. This protein is involved in cobalamin biosynthesis and is probably an enzyme responsible for the conversion of adenosylcobyric acid to adenosylcobinamide or adenosylcobinamide phosphate.	9.01058e-122
CP025930.1\|AUR49997.1\|1417915_1418737_+\|L-lactate-dehydrogenase-Fe-S-oxidoreductase	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	2.32413e-46
CP025930.1\|AUR50277.1\|1402264_1402870_+\|hypothetical-protein	gnl\|CDD\|379447	pfam14063, DUF4254, Protein of unknown function (DUF4254). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 195 and 207 amino acids in length.	3.30374e-84
CP025930.1\|AUR48971.1\|1411694_1415102_-\|hypothetical-protein	gnl\|CDD\|380475	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins. CRISPR-Cas (clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins) adaptive immune systems defend microbes against foreign nucleic acids via RNA-guided endonucleases. These systems are divided into two classes: class 1 systems utilize multiple Cas proteins and CRISPR RNA (crRNA) to form an effector complex while class 2 systems employ a large, single effector with crRNA to mediate interference. Class 2 type VI CRISPR-Cas13 systems use a single enzyme to target RNA using a programmable crRNA guide and are divided into four subtypes based on the identity of the Cas13 protein (Cas13a-d). The Cas13 proteins are capable of both pre-crRNA processing and target RNA cleavage, which protect the host from phage attacks. Once bound to a target RNA, their non-specific RNase activity is activated. Cas13b has many distinctive features compared to the other Cas13 proteins, including the lack of significant sequence similarity, disparate crRNA repeat region, and double-sided protospacer flanking sequence (PFS)-dependent target RNA cleavage.	0
CP025930.1\|AUR50460.1\|1420801_1421275_-\|thioesterase-family-protein	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	4.83078e-11
CP025930.1\|AUR49706.1\|1402953_1404009_+\|ADP-heptose--LPS-heptosyltransferase-2	gnl\|CDD\|340821	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	1.34696e-44
CP025930.1\|AUR50593.1\|1423128_1423494_+\|virulence-protein-RhuM-family	gnl\|CDD\|226452	COG3943, COG3943, Virulence protein [General function prediction only].	3.33679e-08
CP025930.1\|AUR49370.1\|1418733_1420101_+\|L-lactate-dehydrogenase-Iron-sulfur-cluster-binding-subunit	gnl\|CDD\|224062	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion].	1.33669e-136
CP025930.1\|AUR50491.1\|1403992_1404445_+\|S4-RNA-binding-protein	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	1.32349e-10
CP025930.1\|AUR50343.1\|1408729_1409296_-\|cob(I)yrinic-acid-ac-diamide-adenosyltransferase	gnl\|CDD\|376665	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase. Cobalamin adenosyltransferase This family contains the gene products of PduO and EutT which are both cobalamin adenosyltransferases. PduO is a protein with ATP:cob(I)alamin adenosyltransferase activity. The main role of this protein is the conversion of inactive cobalamins to AdoCbl for 1,2-propanediol degradation.The EutT enzyme appears to be an adenosyl transferase, converting CNB12 to AdoB12.	1.56687e-78
CP025930.1\|AUR50315.1\|1420106_1420691_+\|lactate-utilization-protein-C	gnl\|CDD\|224473	COG1556, COG1556, Uncharacterized conserved protein [Function unknown].	4.89926e-18

>CP025930.1|AUR49425.1|1409318_1410638_-|cobyrinate-ac-diamide-synthase
MFVPIKRSHLLISAASSGGGKTTFTLGLLRLLRRRGLKVQPFKCGPDYIDPKYHRLACGTETVNLDAFMMSREHIAGLYDRYGCEADVSIVEGVMGLFDGYDRMTGSSALLAENLCIPVLLLIHAGSTAYSVAPILYGFKHFRPGVAPVGVVFNKVGSASHYRYLEEAAADAGVASLGYLPKMKDLEVPSRHLGLSVEDLARYDYLPDRVADAIEKYVDVERLLGLMASDVDPVIEEESFTESSLHGRKCIAMADDEAFNFTYRENIRRLESRGRVLRFSPLRDNRLPADCDFLYLPGGYPEFYLPALSANASMKQSVRDYIESGGHALAECGGMMYLCDTIRGMDGRDYPMCGVLSEAATMEGMRLHLGYRRMVYKGKELRGHEFHYSSTIGSTPSVAQQYNVRGEAVETPLYRYKNLLAGYTHLYWGEHDDLWTWFD
>CP025930.1|AUR50343.1|1408729_1409296_-|cob(I)yrinic-acid-ac-diamide-adenosyltransferase
MIYTKTGDKGTTGIFGGERVPKDDVRVEAYGTMDELNAAIGMIRTFLPEEDERQTVLYDIQMRMMAAMSIVATPAGKREQNPNHFPEEAAADCEAFIDRLLAETTDNGYFILPGGTPLSAHLQLARTIARRAERRLWTLHRSDEVPDAILKWMNRLSDLFFVMARHEMQQQGWSEEKWHRFAYKRKKK
>CP025930.1|AUR49288.1|1407236_1408733_-|cobyric-acid-synthase
MTEGGKLRPIMFVGTGSDVGKSIIATGFCRIFRQDGYHPAPFKAQNMALNSFVTPEGLEIGRAQAVQAEAAGIPCHTDMNPVLLKPSSDHTSQVVLNGRPIGNRDAYEYFRREGRDELRTEVYAAFDRLASRFSPVVMEGAGSISELNLRDTDIVNMPMAIHAGACVILVADIDRGGVFASVYGSIMLLSAEERKYVRGIMINKFRGDLRLFDEGKKILEELCGIPVVGVIPYYKDIHIEEEDSVALSVKQYAAGQGRVNVAVVLLRYLSNYTDFNVLERDPRVHLYYTNNTEELRKADIIILPGSKSTLADLYELRRNGAAQAIVQAHRDGTTVLGICGGFQLMGMEVCDPDHIEGDIERLPGLGLLPVTTVMTGEKVTRRTAFRFLDHTDECEGYEIHMGRTMPVEGAASSPLNRLSDGTEDGYFVDATCMGTYVHGILDNPAVIDYLLSPYADKMEERKSFDYVRYKDEQYDKLADHLRRYADVPLIYQLMKDDD
>CP025930.1|AUR49775.1|1406236_1407244_-|cobalamin-biosynthesis
MIKGHGDDLYRHGPIRANFSSNVYNATERQGLLDHLHKRLDSIGSYPEPEPYSLEKGLADYHGIAADSISVTSGATEAIYLIAQAFRGSSSAVVVPTFSEYADACRLHGHGVDFISKPEEASSRYDMVWLCNPNNPTGRVWKASELYRIVRECPSTIFIVDQSYEYFSTAEVLGTKEAISLPNLLLLHSLTKRFAIPGLRLGYLTAHASLTERIRVCRMPWSVNALAIAAGEYLVQQGFPTSIPLAELHAETERLRTAIGSMAGYEVEPTDTHFMLVRCRHHSAADLKAVLADQYGLLIRDASNFEGLDTHCIRIATQTREQNDWLIDALRSISF
>CP025930.1|AUR49698.1|1405200_1406262_-|cobalamin-biosynthesis
MHFDRFLSNFLFGMQGSVLILLLFLLPLLLGWLADYFLGDPLSLPHPIVGFGRMIAFGEKRLNKGNYRKVKGAFMSVFYIVAVFLLALLILLGLVFVCVYTILLDDFFRIAVAFAVASLILAIGIFFCLAGTTLIREVRMVFEAVDRSLEEGRKQVTRIVGRDTAALSAQEVRTAALETLSENLSDGVVAPMFWYMWLGLPGMMAYKMINTLDSMIGYKTARYFLFGRIAAKIDDVANYIPARLTAWLMILVSGKLHLFSFVRRYGRQHASPNSGYPEAALAGILNCRFGGTHDYFGESISKPYIGHNERELATADMQIAIRINRRVELVMLLLTFVVSCELDYLLALSFCLI
>CP025930.1|AUR50491.1|1403992_1404445_+|S4-RNA-binding-protein
MKLRINKLISDAGLGSRREAEKYITEGRVKINGRIARLTDLVCEKDIVLLDDIDIPIKDLIREEISLRKYEERLAPSASNQGRQDEKRKNPRPKQHKEVPSQRNAGKPRSESRIRNRWEEGDEDDFDFDRGRGFRKGNRKNDSSVKKFRH
>CP025930.1|AUR49706.1|1402953_1404009_+|ADP-heptose--LPS-heptosyltransferase-2
MARYLIVRLSAIGDVAMTIPVLYAVAKAYPQHSFTLLTQPFLTSLLINPPNNLEGMGIDIKHEESSLVGLLTYIGRLKDEQFDYVIDLHNVIRSKIIRFYLRFFGVKGFSLKKPRLQLRQLTAKPPKKPTRLPSVIERYAQVFHKAGLEIHPPYPILLNDSGHISTELPIVEIGSGHHLIGIAPFAGHEAKTYPPEKMHEVVRTLAERDDVQIFLFGGKGKEKNILEQWADESPRIVSVAGLLSLPEELSLIHALRCMVSMDSANMHFASLVGTRVISIWCATHPAAGFLGYGQRIEDCIGADLDCRPCSVFGNKPCFRKDYACRTQIEPQLIINKIVSTLTDLNSDETEN
>CP025930.1|AUR50277.1|1402264_1402870_+|hypothetical-protein
MTISKLCNRIFGEAIQAYNVTDSVDAPCNNPYRPQTIEHYLFLKNWIDNAQWHLEDIIRDPNIDPADALVIKRRIDKSNQDRTDLVELIDSYFLDTYKDVKVLPDATINTESPAWAIDRLSILKLKIHNMRLATERPDADDAHRAKCQEKLRVLIEQDADLCTAIDQLVDDIAAGRKYMKVYKQMKMYNDPTLNPILLGKK
>CP025930.1|AUR49355.1|1400163_1401549_+|Fe-dependent-oxidoreductase-alcohol-dehydrogenase
MRLKEIKEIGVSFKAKRNQISDAFQGIYSKNLVRVLYLIPECVHSNHRHRIFLHNEEFATFGKVGRNGILPAIDKSIFIMNNFKFKNPTELIFGQGMIKELPKRVPAGVPVLVTFGSGSVRYNGVYRAVKDALEGYDLVEFWGIESNPKIETLRKAIAMGKEHNCQFVLAVGGGSVIDGSKLIAAAIPYEGDAWELVLKGYSRDTILPLGTVLTIPATGSEMNSGAIISREETKEKLVFRGNFPVFSILDPEVTFSLPPYQIACGLADSFVHVIEQYITTPGQSRLMDRWAESIMLTLKEIAPLIRENPHSYDLMADFMLCATMALNGFIAMGVTQDWATHMIGHEITALTGLTHGHTLAIVLPGTLRTLGHDHKREKMLQYAERIWDIKEGTEEERIDAAIARTEEFFRELGLKTRLEEMHIGSDVIKEIERRFIERGVSYGEALDVDGPMARCILEACR
>CP025930.1|AUR49610.1|1398893_1400021_+|galNAc-alpha-(1-4)-GalNAc-alpha-(1-3)--diNAcBac-PP-undecaprenol-alpha-14-N-acetyl-D-galactosaminyltransferase
MNFLKKEPFKIFSMIYLLLDTITNRAGTERAVINLANNLHANGHRVSLVSVCTKEGEPSFQVEKGIEVHHLGIRLYGNALARKTVYFKAYRRIKALYKKREPVLLIGTNIFINTILSQISNRGRIFTIGCEHISYDIARPITKRIRGFLYSGLDAVVALTKRDQQSFEAILRGRSKAYVIPNQVSFTTVQRDATTHKQMLAIGRLTYQKGFEFMIEDASRVLRERPDWKLIIVGDGENESMLRKEIASRNMESQIEIHPSTPEIRKYYESSAIYLMTSRFEGLPMVLLEAEAYALPIISYDCPTGPRELIENGRNGFLVPMEAHEDFADKLRLLMDDETLRKKMGQESELMVKSYSPANIYECWKKLFVEIGYMN
>CP025930.1|AUR48971.1|1411694_1415102_-|hypothetical-protein
MNTVPASENKGQSRTVEDDPQYFGLYLNLARENLIEVESHVRIKFGKKKLNEESLKQSLLCDHLLSVDRWTKVYGHSRRYLPFLHYFDPDSQIEKDHDSKTGVDPDSAQRLIRELYSLLDFLRNDFSHNRLDGTTFEHLEVSPDISSFITGTYSLACGRAQSRFAVFFKPDDFVLAKNRKEQLISVADGKECLTVSGFAFFICLFLDREQASGMLSRIRGFKRTDENWARAVHETFCDLCIRHPHDRLESSNTKEALLLDMLNELNRCPRILYDMLPEEERAQFLPALDENSMNNLSENSLDEESRLLWDGSSDWAEALTKRIRHQDRFPYLMLRFIEEMDLLKGIRFRVDLGEIELDSYSKKVGRNGEYDRTITDHALAFGKLSDFQNEEEVSRMISGEASYPVRFSLFAPRYAIYDNKIGYCHTSDPVYPKSKTGEKRALSNPQSMGFISVHDLRKLLLMELLCEGSFSRMQSDFLRKANRILDETAEGKLQFSALFPEMRHRFIPPQNPKSKDRREKAETTLEKYKQEIKGRKDKLNSQLLSAFDMDQRQLPSRLLDEWMNIRPASHSVKLRTYVKQLNEDCRLRLRKFRKDGDGKARAIPLVGEMATFLSQDIVRMIISEETKKLITSAYYNEMQRSLAQYAGEENRRQFRAIVAELRLLDPSSGHPFLSATMETAHRYTEGFYKCYLEKKREWLAKIFYRPEQDENTKRRISVFFVPDGEARKLLPLLIRRRMKEQNDLQDWIRNKQAHPIDLPSHLFDSKVMELLKVKDGKKKWNEAFKDWWSTKYPDGMQPFYGLRRELNIHGKSVSYIPSDGKKFADCYTHLMEKTVRDKKRELRTAGKPVPPDLAADIKRSFHRAVNEREFMLRLVQEDDRLMLMAINKMMTDREEDILPGLKNIDSILDEENQFSLAVHAKVLEKEGEGGDNSLSLVPATIEIKSKRKDWSKYIRYRYDRRVPGLMSHFPEHKATLDEVKTLLGEYDRCRIKIFDWAFALEGAIMSDRDLKPYLHESSSREGKSGEHSTLVKMLVEKKGCLTPDESQYLILIRNKAAHNQFPCAAEMPLIYRDVSAKVGSIEGSSAKDLPEGSSLVDSLWKKYEMIIRKILPILDPENRFFGKLLNNMSQPINDL
>CP025930.1|AUR50131.1|1415098_1415815_-|hypothetical-protein
MEKFSLYDFLAIILPGIAFIVVFRIIFSSLHLSLPVDIPLGLESTIVYALICGAVLYVLSFSLVKLFPRLFGLYRHVADLYQKMKALHPIMNDTLNRQAEQWGLGKIYLSEEEFCQSEEKEKIRMLQSDFYDRMWYRLDFRGKLGNAKSFQCYYFFFRHSFWGLVLISLILLSYKLLAYIPACDMEDIGWREYSDIAVPIMILSALFVFLAQWFRIKMVEKMYWTFYISLIEQENSNL
>CP025930.1|AUR49941.1|1416803_1417676_+|phosphoserine-phosphatase
MNGDYRIYIMAARADLLHVAAVCRAVEAIGARIVQFVREADTYDPCVRLSVAYKGAKSLLIKALMPMARTYPIMLGIRREDTPVGRIGLVAFDLDSTLVRTEIMNELATAHGCLDEMGELTEAAMSGREEFPDNFSRRVSMLRGLPLAKLEELSASLPIVEGLPSLMRKFKEQGIRSAIISGGFRLYSHNIKERYGFDYICTSEVEVENGLLTGRLSGTIVDAKVKAEFLRSLAKELSLTPAEIVAVGDGANDVPMLDFSAGSIIFNSSAHPPSMPQLRIEAILQFMGCR
>CP025930.1|AUR49997.1|1417915_1418737_+|L-lactate-dehydrogenase-Fe-S-oxidoreductase
MAEEEAFVPLQGIGTKVFKNTIIRFITMKVGLFIPCYVNAVYPEVGIATYKLLKSLDIDVDYPMDQTCCGQPMANAGFEQKAQKLALRFEELFESYDVVVGPSASCVAFVKENYDHILRPTGHVCKSAAKVRDICEFLHDDLKITSLPSRFAHKVSLHNSCHGVRELHLSTSSEVHRPYHNKVRRLLEMVQGIEVFEPKRIDECCGFGGMYSVEEPEVSTCMGYDKVLDHISTGAEYITGPDSSCLMHMQGVIDREKLPIKTIHAVEILAANL
>CP025930.1|AUR49370.1|1418733_1420101_+|L-lactate-dehydrogenase-Iron-sulfur-cluster-binding-subunit
MSTKHSEAAARFLENKAGAKWHDETLWMVRHKRDIQRDTVPEWEDLRQLAHDIKRYNVTHLDELLLRFEENARRNGVIVHWAKDAKEHNEILYGILRDHGVKKFVKSKSMLTEECHLNEYLIEKGINVIETDLGERILQLMEEPPSHIVMPAIHIKREAVSDLFHDKLGTEKGNYDPTYLTRAARKSLREDFISADAAMTGGNFAVASTGEVVVCTNEGNADMGMACQKLNICSFGLEKLVPDLDAVGVFTRLLARSGTGQPSTTYTAHYRKPHEGGELHYIIVDNGRTDIIENEEHVKTLNCIRCGACMNTCPVYRRSGGYSYTYFIPGPIGINLGMLKDPRRYSDNVSACSLCLSCSNVCPVKIDLGEQIYRWRQDLDHLGRASQEKKLMSAGMKYLMDSSWRFNTALKMAPIANSLPRFLLYNGLNAWGKGRELPRFASTSFNNWWKKNIKK
>CP025930.1|AUR50315.1|1420106_1420691_+|lactate-utilization-protein-C
MDSRQIILDRIKQHTKQREPKPEMNFTPITYPDKVARFIEISRAVGGDAIELQPGQDINEVIRAAYPDAKRIGSALPYIHIATYKPDEVENPGDMNGTDLAVIEGEIGVCENGCVWVDQTIQKRAMFFISEYLVIVLDKTKLVHNMHEAYKRVAEIDSQSPYSCFISGPSKTADIEQSLVIGAHGARGAIVILK
>CP025930.1|AUR50460.1|1420801_1421275_-|thioesterase-family-protein
MDKKSFQEYYATGFSHCYGCGTSNEHGLHVKSYWAEEHPDETVAYFRPDSHHTGGFPGFVYGGLIAAILDCHGNGTAAAAGYRFQSRPMDSEPNLRYVTANLNLNYRRPTPMGVDLELRAHIKEVTDRKVLMELSLIAEGQVTVEGSMLSVLLPEKK
>CP025930.1|AUR49505.1|1421878_1423114_+|bacteriophage-integrase
MRSTFKVLFYLKKNAPKKNGSVPVMCRITIDGTIAQFSCKCDIHPDLWDIKSNRASGKSAVALETNRFLDKIRVGINAKYKEIAERDNYVTAEKVKNAFLGLEMRHETLLKVFAQHNEDFFKQVDAGLRCPSTYHKYCTVYKHLEEFIKNRYRVSDIALKELTPAFITDFDIFLRTEKQCCNNTVWIYMMPLRRMITIAQNHGWIVRDPFVDYSISAESTDRDYLTKDEIRQLLDLKFRRKSMELARDLYVFCCFTGLSFTDMKNLTKDNLQTSFDGKLWIMTKRQKTGVESNIMLLDIPKQIIEKYDGMAKENFLLPVPQYITACKNIKKIIGLCGIEKEITWHTSRHTMATEICLTNGVPIETLSKMLGHTNIRTTQIYAKITHEKESRDMAALSDKLSKIEQFNGITI
>CP025930.1|AUR50593.1|1423128_1423494_+|virulence-protein-RhuM-family
MKREIITIGQKGKVHIPTATPVWMSACEIASLFGVFSSKVNSHIKSIFKEGLLREDEVMQTLLFRDGSVDLYNLEMITMLSFRFASPQAKSFRQWIIGRLTEKKRTSPPLLVCYGKGGWYN
>CP025930.1|AUR50649.1|1423543_1423846_-|DNA-binding-helix-turn-helix-regulator
MDNDVKTKNNEEIAHFLNASDRMIKGIDVLRKKNRPLLNGHRYLTDDELSRLLHINRRTLQDYRNMGRISFVKLGGKVLYREEDVEKLLQENYRPRFEKP

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Crispr_ID: CP025930_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025930_6

1575467-1575561

Orphan

Consensus_repeat	Method
CTTTCAAATAGAGAATGATACATAACTAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025930_6

>merge|CP025930|6|1575467-1575561|CRISPRCasFinder
CTTTCAAATAGAGAATGATACATAACTAACTCGGGTGGAATCTTTTGCAATACAGGAGAAATGGACTTTCAAATAGAGAATGATACATAACTAAC

>CP025930|6|6|1575467-1575561|CRISPRCasFinder
CTTTCAAATAGAGAATGATACATAACTAAC	TCGGGTGGAATCTTTTGCAATACAGGAGAAATGGA
CTTTCAAATAGAGAATGATACATAACTAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025930.1\|AUR49212.1\|1593136_1594813_-\|aspartate/alanine-antiporter-cobalt-transporter	unknown	unknown	gnl\|CDD\|179654
CP025930.1\|AUR49670.1\|1579489_1580575_+\|transposase-in-ISPg8	unknown	unknown	gnl\|CDD\|377531
CP025930.1\|AUR49851.1\|1588771_1589701_-\|peptidylarginine-deiminase	unknown	unknown	gnl\|CDD\|227211
CP025930.1\|AUR50344.1\|1591386_1591953_+\|elongation-factor-P	unknown	unknown	gnl\|CDD\|234788
CP025930.1\|AUR50417.1\|1592488_1592995_+\|Nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|273496
CP025930.1\|AUR49386.1\|1595029_1596385_+\|succinyl-diaminopimelate-desuccinylase	unknown	unknown	gnl\|CDD\|349929
CP025930.1\|AUR49634.1\|1574358_1575459_-\|transposase-in-ISPg2	unknown	unknown	gnl\|CDD\|379382
CP025930.1\|AUR50257.1\|1571513_1572137_-\|recombination-protein	unknown	unknown	gnl\|CDD\|234616
CP025930.1\|AUR49126.1\|1568982_1570992_-\|DNA-ligase	unknown	unknown	gnl\|CDD\|236137
CP025930.1\|AUR49276.1\|1572133_1573648_-\|ribonuclease-G	unknown	unknown	gnl\|CDD\|273254
CP025930.1\|AUR49507.1\|1567734_1568970_-\|lipoprotein-releasing-system	unknown	unknown	gnl\|CDD\|274034
CP025930.1\|AUR49230.1\|1587063_1588695_-\|delta-1-pyrroline-5-carboxylate-dehydrogenase	unknown	unknown	gnl\|CDD\|143441
CP025930.1\|AUR50034.1\|1565896_1566682_-\|hemolysin-A-1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
CP025930.1\|AUR49052.1\|1576164_1578561_-\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|235937
CP025930.1\|AUR50482.1\|1575640_1576096_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274161
CP025930.1\|AUR50665.1\|1573968_1574247_-\|Nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|259858
CP025930.1\|AUR50676.1\|1566687_1566954_+\|membrane-protein-involved-in-tellurium-resistance	unknown	unknown	unknown
CP025930.1\|AUR50395.1\|1570979_1571507_-\|ribosomal-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
CP025930.1\|AUR49512.1\|1589707_1590937_-\|ornithine-aminotransferase	unknown	unknown	gnl\|CDD\|273853
CP025930.1\|AUR50116.1\|1565150_1565882_-\|DNA-alkylation-repair-enzyme	unknown	unknown	gnl\|CDD\|378033

Protein	Function_ID	Function_description	E-value
CP025930.1\|AUR49670.1\|1579489_1580575_+\|transposase-in-ISPg8	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	1.564e-23
CP025930.1\|AUR49851.1\|1588771_1589701_-\|peptidylarginine-deiminase	gnl\|CDD\|227211	COG4874, COG4874, Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown].	1.69691e-114
CP025930.1\|AUR50344.1\|1591386_1591953_+\|elongation-factor-P	gnl\|CDD\|234788	PRK00529, PRK00529, elongation factor P; Validated.	3.23865e-100
CP025930.1\|AUR50417.1\|1592488_1592995_+\|Nucleoid-associated-protein	gnl\|CDD\|273496	TIGR01201, HU_rel, DNA-binding protein, histone-like, putative. This model describes a set of proteins related to but longer than DNA-binding protein HU. Its distinctive domain architecture compared to HU and related histone-like DNA-binding proteins justifies the designation as superfamily. Members include, so far, one from Bacteroides fragilis, a gut bacterium, and ten from Porphyromonas gingivalis, an oral anaerobe. [DNA metabolism, Chromosome-associated proteins].	9.49485e-63
CP025930.1\|AUR49386.1\|1595029_1596385_+\|succinyl-diaminopimelate-desuccinylase	gnl\|CDD\|349929	cd05680, M20_dipept_like, uncharacterized M20 dipeptidase. Peptidase M20 family, unknown dipeptidase-like subfamily (inferred by homology to be dipeptidases). M20 dipeptidases include a large variety of bacterial enzymes including cytosolic nonspecific dipeptidase (CNDP), Xaa-methyl-His dipeptidase (anserinase),and canosinase. These dipeptidases have been shown to act on a wide range of dipeptides, but not larger peptides. For example, anserinase mainly catalyzes the hydrolysis of N-alpha-acetylhistidine while carnosinase degrades beta-alanyl-L-histidine.	0
CP025930.1\|AUR50395.1\|1570979_1571507_-\|ribosomal-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	5.60782e-20
CP025930.1\|AUR50257.1\|1571513_1572137_-\|recombination-protein	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	3.9697e-107
CP025930.1\|AUR49212.1\|1593136_1594813_-\|aspartate/alanine-antiporter-cobalt-transporter	gnl\|CDD\|179654	PRK03818, PRK03818, putative transporter; Validated.	0
CP025930.1\|AUR49276.1\|1572133_1573648_-\|ribonuclease-G	gnl\|CDD\|273254	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family. This model describes ribonuclease G (formerly CafA, cytoplasmic axial filament protein A), the N-terminal domain of ribonuclease E in which ribonuclease activity resides, and related proteins. In E. coli, both RNase E and RNase G have been shown to play a role in the maturation of the 5' end of 16S RNA. The C-terminal half of RNase E (excluded from the seed alignment for this model) lacks ribonuclease activity but participates in mRNA degradation by organizing the degradosome. [Transcription, Degradation of RNA].	1.16593e-131
CP025930.1\|AUR49507.1\|1567734_1568970_-\|lipoprotein-releasing-system	gnl\|CDD\|274034	TIGR02212, releasing_system_transmembrane_protein_lolC., lipoprotein releasing system, transmembrane protein, LolC/E family. This model describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC. [Protein fate, Protein and peptide secretion and trafficking].	1.09536e-39
CP025930.1\|AUR49230.1\|1587063_1588695_-\|delta-1-pyrroline-5-carboxylate-dehydrogenase	gnl\|CDD\|143441	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.	0
CP025930.1\|AUR50034.1\|1565896_1566682_-\|hemolysin-A-1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	7.53968e-58
CP025930.1\|AUR50482.1\|1575640_1576096_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274161	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055) and utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487). The two components form an alpha-2/beta-2 heterodimer. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism, Protein fate, Protein modification and repair].	8.65281e-63
CP025930.1\|AUR49052.1\|1576164_1578561_-\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|235937	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
CP025930.1\|AUR50665.1\|1573968_1574247_-\|Nucleoid-associated-protein	gnl\|CDD\|259858	cd13836, IHF_B, Beta subunit of integration host factor (IHFB). This subfamily consists of the beta subunit of integration host factor (IHF) and IHF-like domains. IHF is a nucleoid-associated protein (NAP) that binds and sharply bends many DNA targets in a sequence specific manner. It is a heterodimeric protein composed of two highly homologous subunits IHFA (IHF-alpha) and IHFB (IHF-beta). It is known to act as a transcription factor at many gene regulatory regions in E. coli. IHF is an essential cofactor in phage lambda site-specific recombination, having an architectural role during assembly of specialized nucleoprotein structures (snups). IHF is also involved in formation as well as maintenance of bacterial biofilms since it is found in complex with extracellular DNA (eDNA) within the extracellular polymeric substances (EPS) matrix of many biofilms.	3.05457e-33
CP025930.1\|AUR49634.1\|1574358_1575459_-\|transposase-in-ISPg2	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	1.1556e-24
CP025930.1\|AUR49126.1\|1568982_1570992_-\|DNA-ligase	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
CP025930.1\|AUR49512.1\|1589707_1590937_-\|ornithine-aminotransferase	gnl\|CDD\|273853	TIGR01885, Ornithine_aminotransferase, ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis (OMNI\|PG1271), and the other from Staphylococcus aureus (OMNI\|SA0170). After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis (SP\|P38021).	0
CP025930.1\|AUR50116.1\|1565150_1565882_-\|DNA-alkylation-repair-enzyme	gnl\|CDD\|378033	pfam08713, DNA_alkylation, DNA alkylation repair enzyme. Proteins in this family are predicted to be DNA alkylation repair enzymes. The structure of a hypothetical protein in this family shows it to adopt a supercoiled alpha helical structure.	3.66086e-69

>CP025930.1|AUR49634.1|1574358_1575459_-|transposase-in-ISPg2
MVPGPRIERKKIYPLDFLLLIVFLSTLSGNTSWYEIEDYAEEYEEELKSLYEMLTGHQLMHTMPSHDTLNRSISLLDVEAFEGAYKRWIEGFISATSGKHICIDGKTMRGVKKLSFDTQSHVVSAFSPQDMCSLAQLYIDRKTNEIPAIHQLLDLLDLNGAVVSIDAIGTQTAIVEQIIDKGGDYVLCVKANQSLSLQEIEAYFCPLFQKHILLDEQTELSHGRIETRRYESILNPLEIEANEVLTRRKGLRSIHKVVRKRRDKKSDKTSEEVAYYISSLTDVSSLKQAIRGHWAIENKLHHCLDVYFGHDASHKRTRNVAQIMDIIQKINLLIIERLKTNMKSSIPRIQKKPARMKPQQLITIQF
>CP025930.1|AUR50665.1|1573968_1574247_-|Nucleoid-associated-protein
MTKADVVNAIAKSTGIDKETTLKVVESFMDTIKDSLSEGDNVYLRGFGSFIVKERAEKTARNISKQTTIIIPKRNIPAFKPSKIFMSQMKQD
>CP025930.1|AUR49276.1|1572133_1573648_-|ribonuclease-G
MAVLEDGKLVELQREPRNLSFAVGDIYLGKVKKVMPGLNAAFVDVGYKKDAFLHYLDLGLTFDAQQKMMEMMTKSKSIPSLSKVPLGSDLPKEGKIADVLKAGQQILVQIAKEPISTKGPRLTAELSFAGRSLVLVPFADKVSVSQKIRSAEERARLRQLIISIKPKNFSVIIRTSAEGKRASELDKELQSLLRRWDDNIKKLLRAKAPSIVYEEASRTLGLLRDNFNPSYQSIIVNDKAFRDSLSDYVELIAPGREEIVQYYQGELPIFDHFAITKQIKALFGRTVTYKSGAYLIIEQTEAMHVVDVNSGNRSRGSTEQEATAVDVNMAAAEELARQLRLRDMGGIIVVDFIDMSEAQHRQQLYEHMVKLMSADRARHNILPLSKFGVMQITRQRVRPAMVIHTEECCPTCLGTGKVESSILFTDQLEEKVAKMVTEHQVKQFVLHVHPYVAAYLKKGFLSSILKKWKLKYAKGIKLIPDESLGFLDYTFYDYDGNELDILDE
>CP025930.1|AUR50257.1|1571513_1572137_-|recombination-protein
MIQKYPSRLLEKAIDQFATLPGVGRKTALRLALYLLRQPVENTRQFAAALVDLREHISYCRRCHNISDSGVCTICADPTRDQSTLCVVENIRDVMAIENTSQYRGLYHVLGGVISPMDGIGPGDLQIDSLVHRVASEQIHEVILALSTTMEGDTTNFFLFRKLESTGVRVSVIARGIAIGDEIEYADEITLGRSILNRTDFSDSVKF
>CP025930.1|AUR50395.1|1570979_1571507_-|ribosomal-N-acetyltransferase
MTDLFSSEQVRLRALEPEDLDFLYLWENDAELRESGNMLVPIGRNRLREYIKKSSEGLMELGMMRLVICLSDDDKPIGAIDLYEYDAFHRRVAVGLFVIPEYRRLGIAVESLRKISHYVLDYLRLHQIIAYVLEDNKPSRMLFEAAGFEHTATLRQWMWHAGDYSDVLLYQLWKR
>CP025930.1|AUR49126.1|1568982_1570992_-|DNA-ligase
MEKIVPPAVRIEELRRILREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDSPTHRVGSDKTEGFASVRHDRPMLSLSNTYNYDEIGDFYRRVSEGLQGAPFEIVAELKFDGLSISLIYEDGMLVRAVTRGDGIMGDDVTANVRTIRSVPLRLRGDDYPRMLEVRGEILLPFKEFDRINAQREAEGEPLFANPRNAASGTIKQLDPHIVAGRNLDAYFYYLYSDEPLAENHYDRLMQARQWGFKVSDAVTLCCSKEDVYAFIDRFDTERLTLPVATDGIVLKVNAPAQQDLLGFTAKSPRWAIAYKYQAERVRTRLQHVSYQVGRTGAVTPVANLDPVLISGTVVRRASLHNADFIAEKDLHEGDFVYVEKGGEIIPKIVGVDTDARSIDGRPIVFTVLCPDCATPLVREQGEAAYYCPNAEGCPQQQKGRLEHYCGRKAADINIGPETIELLYSRNMIRNVADFYALTEEQLLTLPGFKKRAAAKLLDSIEASKARPYQAILFGLGIRFVGETVAKKLAAVYPSIDALAAATSEELVQIDEIGERIAAAVLHFFSLRQNRELIERLRLAGVSLEAETVSVPVSARLAGKTVVISGTFEKYSRDEYKAMVEDNGGRMAGSVSSKTSFILAGSDMGPSKREKAEKLGVRLMSEEEFLRLIEE
>CP025930.1|AUR49507.1|1567734_1568970_-|lipoprotein-releasing-system
MKIDFFLAGRLFRGGGKEGKGIAPIVRLSVIGIMLSLMVMLITVSIAGGFKQNIRSLVYGYTGHLCIAPVAGTSDHFNAPVGMLEAITSVEGVDRVVPTIEMTGVAKTDSAFAGILLMGDNSLRTRNPLFGQTVSGNYPSFSSADTVPNPILLPQVTADKLHLKIGDKLRIYFAGTERMRLRAFTVAGVYSGGKMDMPVGLVSADVLRRVGGLGTDDVSRLLIYASDPDETDLVVTRVFDRLSETLYVGEQRLTINTATELNPMIMDWLSALDTNVAILLTLMGLVGGFTMIAGLIVLVMDKTQFIGMLKALGCGERLLRRIFLYLAMMLVGRGMIWGNVLALILCLLQQHFRWLRLLDPDIYYMDYVPVQVDWLVWILVNLGTLLVTFLMLLAPSHIISRISPVKALRFE
>CP025930.1|AUR50676.1|1566687_1566954_+|membrane-protein-involved-in-tellurium-resistance
MNLSCNNFCIRQIIVLFAEIKTKTNKTNILTMEGIGKYLGAIILLVGVLVLAIPAFTNSISDKSLMIGLFLVVVGFFAHIILGRRAKA
>CP025930.1|AUR50034.1|1565896_1566682_-|hemolysin-A-1-acyl-sn-glycerol-3-phosphate-acyltransferase
MSVINTKKMNTIGRFLFLIYFCLIGAPLFLLLTILTALTTTVGCMLGGSRIFSYYPGMLWSRCTLFLFLCPIRVRGREHIPGKGPFVVMANHQGACDIFMMYGYLGIPFKWVLKEGIRKLPFVGYACRSAGFVFVDDTRPSSIAHTMDQAKRVLAEGTSIFIFPEGSRTRNGRLARFKKGGFLMADELGVPIIPVSLDGSYRVLPSGKLIPRPHRLTLTIHPPLSVADFGERPLCISEAVRETSRRIASVLPEEMAATQSK
>CP025930.1|AUR50116.1|1565150_1565882_-|DNA-alkylation-repair-enzyme
MDHSQLTAQAVTAHFESIGNPERAGQMQRFFKTAPGEYAEGDLFLGISVPDIRAYEKTHRPWRVEILALLLQQPYHEVRHLALIGMTELYRRARSEAVREGLLASYLSHTTMINNWDLVDVSAPGIVGEYVHAHPIEGNALLDRLADSCLLWEQRIAMVANWRLIRYGEYEATIRIAERLLHHPHDLIHKAVGWMLREMGKKQERLLLAFLDKHAATMPRTALRYAMEKLPSDLRSYYLTKGK
>CP025930.1|AUR50482.1|1575640_1576096_-|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MNVYRETICDGPGLHYSIYLAGCRHACPGCHNPSSWDPEAGVLMTDSILGNIIREINANPLLDGITLSGGDPFYNPAGLTCLLQRLRASCTLPIWCYTGYTLEQLKTDLMLSAPLALIDVLVDGPFVRELFDPTLLWRGSSNQCIIRLHEN
>CP025930.1|AUR49052.1|1576164_1578561_-|anaerobic-ribonucleoside-triphosphate-reductase
MEEVILRIVKRDGHVQSFDPEKIRQAIIKAYRAGGVHEEAARIDNIVQSVTDFARQSGELVTVEQIQDRVEEELMRLNPFIAKKYIIYREWRTVERDKRTSMKHTMDGIVTIEKNDVNLGNANMSSHTPAGQMMTFASEVTKDYASKYLLSLRYSRAHRAGDIHIHDLDYYPTKTTTCVQYDIADLYERGFRTKNGSIRTPQNIHSYATLATIIFQTNQNEQHGGQAIPAFDFFMAPGVRKSFVTHLIERLRFVLELRQPTNTDLSTTLPKAIRNLTPLLTDSPQEAGRLYEGLCSASFPFSSTEVEIALATAFRKTRKDTHQAMEGFIHNLNTMHSRGGNQVVFSSINYGTDTSPEGRMVMEELLRATEEGLGHGEVPIFPIQIFKVKEGINYSEADVKSALENFDDAMAGKVLFSAPNFDLLLKACATTAKALFPNFVFLDTPFNLHEDWRADDPKRYLQEVATMGCRTRVFDNVNGPKSSIGRGNLSFTSMNLPRLAIEARHEAEENCPDGDKETIRSEARLLFLESVRRMSTLIADQLYDRYCYQRTALARQFPFMMGNDVWKGGAALEPNEEVGDVIKSGTLGIGFIGGHNAMVAIYGEGHAHNKAAWNTLYDAISVMNDVAQEYKRKYHLNYSVLATPAEGLSGRFTRMDRKRYGIIPGVTDLDYYVNSFHVDVREPIGIAEKIKCEAPFHAITGGGHITYVELDGEAKKNVSVILKIVKMMKDENIGYGSINHPVDTCKGCGFKGVIYDKCPVCGSDRIARLRRITGYLTGSLDTWNSAKQAEEHDRVKHL
>CP025930.1|AUR49670.1|1579489_1580575_+|transposase-in-ISPg8
MAYQSKNTDEHVTFADALLSKRYRKAQNDFLNQVDTLIDWRPIRTLINKKYTKRQNAIGAPAYDVILLFKMLLLETWYNLSDCALEERINDSITFSRFLGLKMEEVSPDHSTISRFRSALTELGLMDKLLAQFNKQLSRHHISVREGVLVDASLVETPHKPNGSITIEVADDRQDNRSEAEKEAEEDYQKQVVRRRKGTDEEARWVYKQKRYHYGYKKHCLTNVQGIVQKVITTAANRSDTKEFIPLLQGANIPQGTAVLADKGYACGENRSYLQTHHLQDGIMHKAQRNRALTEEEKQRNKAIGPIRSTIERTFGSIRRWFHGGRCRYRGLAKTHTQNILESIAFNLYRTPGIIMSSSVG
>CP025930.1|AUR49230.1|1587063_1588695_-|delta-1-pyrroline-5-carboxylate-dehydrogenase
MNNSHFAFAKPVNEPVYGYAPGSPERKKLKEEFQRQLSTPIEIPIIIGGKEIRTGDTGTVVMPHNHAVRLATYHRVGEKEVLQAIEAAEKARQDWSRLPWTERASVMLRIGELISTKYRYQLAASVMLGQSKNPMQAEIDAPCELIDFLRFGAYYAGQIYADQPISEKGILNRVEYRSLEGFVLAVTPFNFTSIASNLNLAPAMMGNTTIWKPSTTALHSNYLLMKIFQEAGLPDGVVNFLPGQGSLIGRVATANEHLAGFHFTGSTATFNTLWKSIAGNIDRYRGYPRIVGETGGKNFVMVHPSAEAREVATALVRGAFEYQGQKCSAASRAYIPRSLWPSVKEVMGDMLDSIKMGDVMEFDNFVNAVIDEASFDNIMNYLAAAKRDSDAKIIFGGEGDKSVGYFIRPTVIETTNPHYATMTDELFGPVLTVYVYEDKDFADTLRLCDSTGRYGLTGSIFSRDRYAIEQALDALRFSAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGGPLNLMRWCNPRTVKETFVPPTDYPYPFLAKD
>CP025930.1|AUR49851.1|1588771_1589701_-|peptidylarginine-deiminase
MALIRKQATNRVLMVRPALFGFNAETARNNSFQKETGVPEAVAREAKKEFDNYVNLLREYGVDVWVIQDSKTPHTPDSIFPNNWFSTHVTGELVLYPMYAPNRQQERKLPVLATVGEMEGVDRIINLSGYERDNCFLEGTGSMVLDRVNRIAYCCSSERTNPKVLEEFCRELDYKGLIFTAIDANGAPIYHTNVMMCVASRYAIVCLECIRDEAERSMVVNSLTANGHRIIAISTEQVEHFAGNMLEVESETGQSLLVMSAEARRSLTKEQVAEIEGFSTIIAPELTTIEKNGGGSARCMLAEIFLPQG
>CP025930.1|AUR49512.1|1589707_1590937_-|ornithine-aminotransferase
MVLSEKAKYYVDLEHRYGAHNYHPLEVVLSRGQGAYVWDVDGKRYFDFLSAYSAVNQGHCHPKIIAALKEQAEKICLTSRAFYNDCLGEYEEFMHHYFGYDKMLPMNSGAEAVETALKLSRRWGYRVKGIPEEKAVIIVCDGNFHGRTISIVSMSSDPDSYTDYGPYTPGFVNIPYNNIEALENALEEHKDHVAAFVVEPIQGEAGVFVPDDGYIRRAAELCRKYHALFVADEVQTGIARTGRMLCCDHDDVRPDIVVLGKAISGGVLPVSCVLADDEVMLTIKPGEHGSTFGGFPLACKVAMAALTVVKEERLPERAEELGQYFRGELLKIKSPLLKLVRGRGMLNAIVIEPHNGHEAWDVCEAMAERGLLAKPTHRHIIRLAPPLCITREELAQAVEIIKESIKVLE
>CP025930.1|AUR50344.1|1591386_1591953_+|elongation-factor-P
MATTADFRNGMCLEIEGQYYFIVEFLHVKPGKGPAFVRTKLKNVATGRILDKTWNSGVKVEEVRIERRPYQYLYQDEMGYNFMHPETFEQITIPGASIDGVQFLKDGDMVEAMVHATSETVLTCELPPHVKLRVTYTEPGLKGDTATNTLKPATVETGAEVRVPLFIQEGELIEVDTRDGSYIGRVKE
>CP025930.1|AUR50417.1|1592488_1592995_+|Nucleoid-associated-protein
MLFFKRRQSCIAHKATGKKLWYPQTVINGSTASTLHIAEQISELSGASPGDVFGILRDLGIVMRRELASGKKIKLDGIGCFRLIAQAKGSGVEKKEDVKASQFNSVRVNFRAECRYNTVTRERDCTLIAPDLKFAEYGKPLPAGASSNAGDSNSQTGGGNQGSGGGGL
>CP025930.1|AUR49212.1|1593136_1594813_-|aspartate/alanine-antiporter-cobalt-transporter
MDAIVLWLREVFLEPSVTQTIIILSLVCALGLQLGKLRIGTISLGITFVFFVGILASHFGVTTDPVMLTFAQNFGLVIFVYALGLQVGPSFFPSLKKGGIAQNLISLGLVLLTFLLCILLYYILGISMPNLMGIVAGATTNTPALGAAQTTLHQINPDATAEMAEMALACAVTYPLGVVGVIIALAMLKVMMPKVEERDDSEAPKAFFSEYEICNPALDGKSVREVALLLKRPFVITRVWHNGKVEIPTSDMILYFGDHILAVSGEEDTSQLEILFGKREMKDWNCPDIDWNSVDKQLVSRRLVITRPKLNGVRLGMLKIRNLYGVNISRVDRAGVELLPDRDLRLQLGDRLTVVGEGKAVERVAEILGDEVKQLDNPHLTTLFGGLVLGCVFGMIPFYLPGVSMPIKLGLAGGPIIIGILMGAFGPRFHLTTYVTNSANLLLRQFGIILYLGGLGLASGANFFDTIIHGDGLLWVGTGFLITMLPTLLVGWASIKLLRNRYDGTAGMICGSTANPMALDYVNSQLKGDGASVVYATVYPLSMFVRIIFAQIMILIFA
>CP025930.1|AUR49386.1|1595029_1596385_+|succinyl-diaminopimelate-desuccinylase
MNIRDYIRENEARFLEDLFALIRIPSVSAKSEHKPDMQRCAEHWRNHLLQVGAQKAEVFRTPGNPVVYAERIMDPKAKTILVYAHYDVMPPEPLELWKSEPFEPVIRDGHIWARGADDDKGQGMIQVKGFETALALGLVQCNVKFLFEGEEEIGSTNLEAFCRAHKEMLSADVIIVSDTSMVSAETPSLTTGLRGLAYWEMEVTGPNRDLHSGHFGGAVANPINELCKLIAGIVDENGRITIPHFYDDVVPLSNEERQMIAQVPFSEEKYCQALDIDTVFGEAGYSTLERNSCRPSFDVCGIWGGYTGEGAKTVLPSKAYAKVSSRLVANQDHEKISQMFIDYIRSVAPKHIKVKVTPLHGGEAYLCPIDLPAYKAAEEACTIAFGKRPLAVRRGGSIPIIATFEKVLGLKTVLMGFGLESNAIHSPNENMPLDIFRKGIESVAEFYRIYK

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Crispr_ID: CP025930_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025930_7

1839116-1839415

TypeVI-B2,TypeVI-B1

VI-B2

Consensus_repeat	Method
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	PILER-CR
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	CRISPRCasFinder
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	CRT

4 spacers

Csx28,cas13b

The CRISPR arrays of CP025930_7

>merge|CP025930|7|1839116-1839415|PILER-CR,CRISPRCasFinder,CRT
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAACCGTTACTTCGATGAAGACTACAACGAAACAGTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAACTAATAAGGTAAAATATAGTAATCCTTTGCCGTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAACGTAAAGAAGAAAAAAGATTAATTCCACTTGGTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAACCTACTCGTGCTACACGAGTTAGTAAATGGAGTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC

>CP025930|7|2|1839116-1839415|PILER-CR
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	CGTTACTTCGATGAAGACTACAACGAAACA
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	TAATAAGGTAAAATATAGTAATCCTTTGCC
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	GTAAAGAAGAAAAAAGATTAATTCCACTTG
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	CTACTCGTGCTACACGAGTTAGTAAATGGA
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC

>CP025930|7|7|1839116-1839415|CRISPRCasFinder
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	CGTTACTTCGATGAAGACTACAACGAAACA
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	TAATAAGGTAAAATATAGTAATCCTTTGCC
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	GTAAAGAAGAAAAAAGATTAATTCCACTTG
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	CTACTCGTGCTACACGAGTTAGTAAATGGA
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC

>CP025930|7|2|1839116-1839415|CRT
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	CGTTACTTCGATGAAGACTACAACGAAACA
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	TAATAAGGTAAAATATAGTAATCCTTTGCC
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	GTAAAGAAGAAAAAAGATTAATTCCACTTG
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	CTACTCGTGCTACACGAGTTAGTAAATGGA
GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025930.1\|AUR50299.1\|1833530_1834124_+\|hypothetical-protein	unknown	unknown	unknown
CP025930.1\|AUR49880.1\|1847964_1848873_-\|drug/metabolite-transporter	unknown	unknown	gnl\|CDD\|273359
CP025930.1\|AUR50338.1\|1843821_1844391_+\|hypothetical-protein	unknown	unknown	unknown
CP025930.1\|AUR49136.1\|1849100_1851077_-\|transcription-termination-factor	unknown	unknown	gnl\|CDD\|236490
CP025930.1\|AUR49738.1\|1831786_1832815_-\|UDP-glucose-4-epimerase	unknown	unknown	gnl\|CDD\|187558
CP025930.1\|AUR49821.1\|1846994_1847954_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133030
CP025930.1\|AUR48976.1\|1840174_1843534_-\|hypothetical-protein	cas13b	cas13b_CAS_V-B1	gnl\|CDD\|380475
CP025930.1\|AUR49277.1\|1845452_1846967_+\|PMT_2-super-family	unknown	unknown	gnl\|CDD\|224720
CP025930.1\|AUR49312.1\|1827325_1828783_+\|internalin-J	unknown	unknown	gnl\|CDD\|380191
CP025930.1\|AUR50079.1\|1828877_1829630_-\|sugar-phosphatase	unknown	unknown	gnl\|CDD\|223710
CP025930.1\|AUR49674.1\|1837298_1838384_-\|transposase-in-ISPg8	unknown	unknown	gnl\|CDD\|377531
CP025930.1\|AUR49788.1\|1852304_1853300_+\|lipoprotein	unknown	unknown	unknown
CP025930.1\|AUR50680.1\|1827051_1827312_-\|inner-membrane-protein-unknown-function	unknown	unknown	unknown
CP025930.1\|AUR50275.1\|1832824_1833430_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770
CP025930.1\|AUR50408.1\|1851753_1852272_+\|Nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|273496
CP025930.1\|AUR49540.1\|1835758_1836958_+\|L-methionine-gamma-lyase	unknown	unknown	gnl\|CDD\|168478
CP025930.1\|AUR50372.1\|1839624_1840170_-\|hypothetical-protein	Csx28	-	unknown
CP025930.1\|AUR49905.1\|1844410_1845313_+\|tRNA-dimethylallyltransferase	unknown	unknown	gnl\|CDD\|234626
CP025930.1\|AUR49103.1\|1829647_1831744_-\|ATP-dependent-DNA-helicase	unknown	unknown	gnl\|CDD\|236794
CP025930.1\|AUR49303.1\|1834126_1835596_+\|3'5'-cyclic-adenosine-monophosphate-phosphodiesterase	unknown	unknown	gnl\|CDD\|277318

Protein	Function_ID	Function_description	E-value
CP025930.1\|AUR49880.1\|1847964_1848873_-\|drug/metabolite-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.38413e-12
CP025930.1\|AUR49277.1\|1845452_1846967_+\|PMT_2-super-family	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	1.16467e-33
CP025930.1\|AUR49136.1\|1849100_1851077_-\|transcription-termination-factor	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
CP025930.1\|AUR49738.1\|1831786_1832815_-\|UDP-glucose-4-epimerase	gnl\|CDD\|187558	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.8347e-180
CP025930.1\|AUR49821.1\|1846994_1847954_+\|glycosyltransferase	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	4.22318e-98
CP025930.1\|AUR50079.1\|1828877_1829630_-\|sugar-phosphatase	gnl\|CDD\|223710	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only].	6.57833e-38
CP025930.1\|AUR49312.1\|1827325_1828783_+\|internalin-J	gnl\|CDD\|380191	NF033187, internalin_J, class 1 internalin InlJ. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin J (InlJ).	3.80553e-35
CP025930.1\|AUR48976.1\|1840174_1843534_-\|hypothetical-protein	gnl\|CDD\|380475	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins. CRISPR-Cas (clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins) adaptive immune systems defend microbes against foreign nucleic acids via RNA-guided endonucleases. These systems are divided into two classes: class 1 systems utilize multiple Cas proteins and CRISPR RNA (crRNA) to form an effector complex while class 2 systems employ a large, single effector with crRNA to mediate interference. Class 2 type VI CRISPR-Cas13 systems use a single enzyme to target RNA using a programmable crRNA guide and are divided into four subtypes based on the identity of the Cas13 protein (Cas13a-d). The Cas13 proteins are capable of both pre-crRNA processing and target RNA cleavage, which protect the host from phage attacks. Once bound to a target RNA, their non-specific RNase activity is activated. Cas13b has many distinctive features compared to the other Cas13 proteins, including the lack of significant sequence similarity, disparate crRNA repeat region, and double-sided protospacer flanking sequence (PFS)-dependent target RNA cleavage.	0
CP025930.1\|AUR49674.1\|1837298_1838384_-\|transposase-in-ISPg8	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	1.13946e-23
CP025930.1\|AUR50275.1\|1832824_1833430_-\|GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	2.67257e-98
CP025930.1\|AUR50408.1\|1851753_1852272_+\|Nucleoid-associated-protein	gnl\|CDD\|273496	TIGR01201, HU_rel, DNA-binding protein, histone-like, putative. This model describes a set of proteins related to but longer than DNA-binding protein HU. Its distinctive domain architecture compared to HU and related histone-like DNA-binding proteins justifies the designation as superfamily. Members include, so far, one from Bacteroides fragilis, a gut bacterium, and ten from Porphyromonas gingivalis, an oral anaerobe. [DNA metabolism, Chromosome-associated proteins].	1.34591e-52
CP025930.1\|AUR49905.1\|1844410_1845313_+\|tRNA-dimethylallyltransferase	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	3.58556e-127
CP025930.1\|AUR49540.1\|1835758_1836958_+\|L-methionine-gamma-lyase	gnl\|CDD\|168478	PRK06234, PRK06234, methionine gamma-lyase; Provisional.	0
CP025930.1\|AUR49103.1\|1829647_1831744_-\|ATP-dependent-DNA-helicase	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
CP025930.1\|AUR49303.1\|1834126_1835596_+\|3'5'-cyclic-adenosine-monophosphate-phosphodiesterase	gnl\|CDD\|277318	cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.91761e-13

>CP025930.1|AUR49674.1|1837298_1838384_-|transposase-in-ISPg8
MAYQSKNTDEHVTFADALLSKRYRKAQNDFLNQVDTLIDWRPIRTLINKKYTKRQNAIGAPAYDVILLFKMLLLETWYNLSDCALEERINDSITFSRFLGLKMEEVSPDHSTISRFRSALTELGLMDKLLAQFNKQLSRHHISVREGVLVDASLVETPHKPNGSITIEVADDREDNRSEAEKEAEEDYQKQVVRRRKGTDEEARWVYKQKRYHYGYKKHCPANVQGIVQKVITTAANRSDTKEFIALLQGANIPQGTAVLADKGYACGENRSYLQAHHLQDGIMHKAQCNRALTEEEKQRNKAIGPIRSTIERTFGSIRRWFHGGRCRYRGLAKTHTQNILESIAFNLYRTPGIIMSSSVG
>CP025930.1|AUR49540.1|1835758_1836958_+|L-methionine-gamma-lyase
MKKEDLMRSGFATRAIHGGAIENAFGCLATPIYQTSTFVFDTAEQGGRRFAGEEDGYIYTRLGNPNCTQVEEKLAMLEGGEAAASASSGIGAISSAIWVCVKAGDHIVAGKTLYGCTFAFLTHGLSRYGVEVTLVDTRHPEEVEAAIRPNTKLVYLETPANPNMYLTDIKAVCDIAHKHEGVRVMVDNTYCTPYICRPLELGADIVVHSATKYLNGHGDVIAGFVVGKEDYIKEVKLVGVKDLTGANMSPFDAYLISRGMKTLQIRMEQHCRNAQTVAEFLEKHPAVEAVYFPGLPSFPQYELAKKQMALPGAMIAFEVKGGCEAGKKLMNNLHLCSLAVSLGDTETLIQHPASMTHSPYTPEERAASDISEGLVRLSVGLENVEDIIADLKHGLDSLI
>CP025930.1|AUR49303.1|1834126_1835596_+|3'5'-cyclic-adenosine-monophosphate-phosphodiesterase
MRKKRSNPYYKVSRRKFSKRNSGRRYSRKRRRNGRRWGLMISLLLLVALGIWIAKRYRAWFVSPAEVAYTVPHTIDRLTLTPGEDFLTQRTVSWRCDTLPQDSWLDYRSPDGADADTLLISLPAEGKEVLTRAGRNYYYHAKINGLKPGRTYTYRVKTGEQTSPWYRFSIPDSSAATDFIYIGDVQDPGNGGSQALLQRLRTLHPTPDFLALGGDQIEGPTDFYWEVWHRVIGDWTASTPVIAATGNHEYIKGLKRQLDPRWVPQYNYPANGPKGFERRSYYIDFPHMRLIVMDTNDIQWPASVFNHRTWLKNALETTVQPWKVVMFHHGVYSVRQGRMNPIIRYGFRSILEEGGADLVLQGHDHAYSRITTKTESGTKTTPVYIISSASPKHYRNGFSEQHDRIGSGLYLYQTIHVTQGEIRYRSTTFDNRPYDDLHLKKQGGRTTVKDNAEDWKEIFAFDNFADSKKGRKKRADYRQAAQERAAGHR
>CP025930.1|AUR50299.1|1833530_1834124_+|hypothetical-protein
MNKSLIILIYTLVWVLLIVLQSLALESANPGTPSFWNTPSAYYSVWIVDAYIIALYYINYFLIAPFMIKRHLFRPYIVLSLALGGIGMLLPVVFHHAWQWTIPGTSEGQMPLYGEGFIASIAAIAVGLSVRGVREWVRLARRNTNLEIALKNKSIAYDRAEARLRSLEQPVSFHNPGTGAKAENAPSSTPVSPQTNE
>CP025930.1|AUR50275.1|1832824_1833430_-|GTP-binding-protein
MEIKKAAFVISNTDVRKCPDTRLPEYAFIGRSNVGKSSLINMLTGQKGLAMTSQKPGKTQLINHFIIDDSWYLVDLPGYGYARLGASNRESLRRIIETYILCREQLSSLFVLIDCRHEPQKIDLEFLQWLGENGIPFSIVFTKADKLSFSRLKENTEAYKQKLLETWEELPPVFITSSEKKTGKEELLDYIDSINQELATK
>CP025930.1|AUR49738.1|1831786_1832815_-|UDP-glucose-4-epimerase
MKRKILVTGGTGYIGSHTTVELQQAGYRVVSVDNFSNSNVAVLDGIARITGVRPDFYEADCNDMEAMERVFTAHPDIAGVIHFAASKAVGESVQKPLLYYRNNILSLLNILELMERFGTRGIVFSSSCTVYGQPEVLPVTEEAPIQEALSPYGNTKQINEEIIRDAIHAGAEYKAILLRYFNPIGAHPTAHIGELPNGVPQNLIPYLTQTAAGIRAELSVFGDDYDTPDGSCIRDYIYVVDLAKAHVAAIERMLNEEKASDSLEVFNIGTGRGVSVLELIRTFERVTGVAVPHRIVGRREGDIEQVWAEPKKANEVLGWKALESLEDTLLSAWRWQQRLSEK
>CP025930.1|AUR49103.1|1829647_1831744_-|ATP-dependent-DNA-helicase
MDILSTKITYLTGVGPKRAEVLKEEIEVRTYLDLLHYFPFRYVDRSRFYAIREIRSDMPYIQLRGVLRNFSEVGEGRRKRLTATFSDGTGSIELVWFKGIKYIRDKLQEGRRYIVFGKPVFFASGYNIAHPEIDAEEKAEQVAGGLTPIYHTTERMKSMGLGSKQLQQLLYVLLNQVSATLTETLPPYILSSYGFVSYQEAIRQIHFPQGVAQLEAARTRLKFEELFYVQLHLIGSKLERKARFQGIVFAQVGALFNTFYKEHLPFELTGAQKKVVREIRQDTLSGHQMNRLVQGDVGSGKTLVALLSMLLALDNGCQACLMAPTEILARQHHHTLSELLRPLGIEVGLLIGSCTARQRERLLPRLADGSLSIVVGTHALLEQGVAFHRLGMAVIDEQHRFGVQQRARLWEKNLDTLPHILIMSATPIPRTLAMTLYGDLDISIIDELPPGRKPIQTLHHFDNDMAPVFRFLRSQLAAGRQVYVVYPMIEGSETTDLKNLEDGFELFSSIFPDEGVTMVHGKMKAKEKEARMADFVSGRSRILLATTVIEVGVNVPNATVMVVENADRFGLSQLHQLRGRVGRGGEQSYCILITGTKTGEDSRRRIQVMVETNDGFEIAEEDMRLRGFGDLEGTRQSGRQISLRIANPARDTELIALSRSIAEQLLERDPELRHPDNQMLALRLNKLFPKEEDWSVIS
>CP025930.1|AUR50079.1|1828877_1829630_-|sugar-phosphatase
MDYNNITEALQAFRTEKAYRHAPLRSCFFDMDGVLFDSMPAHARSWVEAAGECGIAAEPLDFYRWEGQKGSDTIKILFERGYGRLPTEKEIADMYGRKSQLFALYNSGSVIDDAPALVSDVCDRGLRIMLVTGSSQTDILQRLQRSYGDNFSPANMVTGADVHRGKPHPEPYLKALECVGMSPSEAFVVENAPLGVRAAVDAGIFTIAVNTGCLPDADLWDAGASLVLPSMAVLRSLLGELLTESLSSSA
>CP025930.1|AUR49312.1|1827325_1828783_+|internalin-J
MKRKPLFSALVILSGFFGSVHPASAQKVPAPVDGERIIMELSEADVECTIKIEAEDGYANDIWADLNGNGKYDSGERLDSGEFRDVEFRQTKAIVYGKMAKFLFRGSSAGDYGATFIDISNCTGLTAFDCFANLLTELDLSKANGLTFVNCGKNQLTKLDLPANADIETLNCSKNKITSLNLSTYTKLKELYVGDNGLTALDLSANTLLEELVYSNNEVTTINLSANTNLKSLYCINNKMTGLDVAANKELKILHCNNNQLTALNLSANTKLTTLSFFNNELANIDLSGNTALEWLFCNGNKLTKLDVSANANLIALQCSNNQLTALDLSKTPKLTTLNCYSNRIKDTAMRALIESLPTITEGEGRFVPYNDDEEGGEEENVCTTEHVEMAKAKNWKVLTSWGEPFPGITALISIEGESEYSVYAQDGILYLSGMEQGLPVQVYTMGGSMMYSSVASGSAMEIQLPRGAAYVVRIGSHAIKTAMP
>CP025930.1|AUR50680.1|1827051_1827312_-|inner-membrane-protein-unknown-function
MVCEKWLVFVLISCFQNLIANSAGGFVAAIIRGWKKKACLPFSFRRRATKESGWICFGLCAFLWIAPLFELRQYRGIILALGKANI
>CP025930.1|AUR50372.1|1839624_1840170_-|hypothetical-protein
MMTMTICWTPICVQLIKLSGIFIAAYLAYRYAVRKLSKESIENIERCKYQAVLEAHRSFYKLLRFTTDTENADSILVWQKAKGGGAKTYYFRPACIRGFLSELTDEFYKNGNGIFLSKEIISRIFEYRSIVYGLLLSERQNSDERVVINKPETAERMISIHQELTQTVREAIALKKRTLNF
>CP025930.1|AUR48976.1|1840174_1843534_-|hypothetical-protein
MTEQNERPYNGTYYTLEDKHFWAAFFNLARHNAYITLAHIDRQLAYSKADITNDEDILFFKGQWKNLDNDLERKARLRSLILKHFSFLEGAAYGKKLFESQSSGNKSSKKKELTKKEKEELQANALSLDNLKSILFDFLQKLKDFRNYYSHYRHPESSELPLFDGNMLQRLYNVFDVSVQRVKRDHEHNDKVDPHRHFNHLVRKGKKDRYGNNDNPFFKHHFVDREEKVTEAGLLFFVSLFLEKRDAIWMQKKIRGFKGGTETYQQMTNEVFCRSRISLPKLKLESLRTDDWMLLDMLNELVRCPKSLYDRLREEDRARFRVPVDILSDEDDTDGTEEDPFKNTLVRHQDRFPYFALRYFDLKKVFTSLRFHIDLGTYHFAIYKKNIGEQPEDRHLTRNLYGFGRIQDFAEEHRPEEWKRLVRDLDYFETGDKPYITQTTPHYHIEKGKIGLRFVPEGQHLWPSPEVGATRTGRSKYAQDKRLTAEAFLSVHELMPMMFYYFLLREKYSDEASAERVQGRIKRVIEDVYAVYDAFARGEINTRDELDACLADKGIRRGHLPRQMIGILSQEHKDMEEKVRKKLQEMIVDTDHRLDMLDRQTDRKIRIGRKNAGLPKSGVIADWLVRDMMRFQPVAKDTSGKPLNNSKANSTEYRMLQRALALFGGEKERLTPYFRQMNLTGGNNPHPFLHETRWESHTNILSFYRSYLKARKAFLQSIGRSDRVENHRFLLLKEPKTDRQTLVAGWKGEFHLPRGIFTEAVRDCLIEMGLDEVGSYKEVGFMAKAVPLYFERACKDRVQPFYDYPFNVGNSLKPKKGRFLSKEKRAEEWESGKERFRLAKLKKEILEAKEHPYLDFKSWQKFERELRLVKNQDIITWMICRDLMEENKVEGLDTGTLYLKDIRTDVQEQGNLNVLNRVKPMRLPVVVYRADSRGHVHKEQAPLATVYIEERDTKLLKQGNFKSFVKDRRLNGLFSFVDTGALAMEQYPISKLRVEYELAKYQTARVCAFEQTLELEESLLTRYPHLPDKNFRKMLESWSDPLLDKWPDLHGNVRLLIAVRNAFSHNQYPMYDEAVFSSIRKYDPSSPDAIEERMGLNIAHRLSEEVKQAKEMAERIIQA
>CP025930.1|AUR50338.1|1843821_1844391_+|hypothetical-protein
MVFNFLIVSDEVEDFRREIAIDSEATFLDLQNAILDSVGYSHSELTSFFLCDEDWHKGQEITLMEMDTASDEDSYVMENTRLEEFIEDEHQRLVFEFDLMTERYFFIEVMDIVPGKSLSEPKLLTSEGLPPQQSSLDDLMDPTAIPTKQARGLDLEEDFFGDSEYNEDEIDREGFEGFDEITPDLSDNY
>CP025930.1|AUR49905.1|1844410_1845313_+|tRNA-dimethylallyltransferase
METQDHTLYVLLGPTGVGKTDLSLDIAERLGSPIISADSRQIFRELPIGTAAPTPEQRARVPHLFVGTHSVRDYYSAGMYEVEVLEALKELFRKYRGVLLTGGSMMYIDAVCRGIDDIPDPFPEVREELYARYAAEGLDGILAQLRLLDPDYYAKVDRRNYKRVIHGLEICLSTGRPFSSFHRHEAKERPFRIVKIGLYREREELCKRIDARVLEMMEQGLEEEARAVYPLRHLNALNTVGYKEMFEYFDGSIDRAEAVRRIQRNSRVYARKQMTWFRRDSTIRWFHPEADKGTVLTLVT
>CP025930.1|AUR49277.1|1845452_1846967_+|PMT_2-super-family
MKLSFQKKKAFSQTITSLIILVVLFLSCIPYFCKLDSLPIQLWDESRVSMNALCMYYNGDWGMTYYLDEPDMWNTKPPLLVWLQVIFMKLLGPGELAIRLPSALAAVATGILLFWTARKVYGNNLSGVIAAFILSTTPLFVNAHGMRTGDYDSLLLFWVSAFIFCSFFCSQAYRHERIKEAHRYLYIASLALSLAVLTKGVQALIVVPAVLAFVIFYGGPRRILKDKHLYFAFLLFVLIAGAWYLGREIKSAGYLQAIWENELGGRYFDSDSLLNRKSGYFYPTYLWEEYRWGTAIFGGCLLYAVLYGRKRSRVFALYLALCIVFYLSILSMSVTKIWWYMLPIIPPMTLIIAGIGVPVMYRLKKLYRPAVIAPVSLLLVVFFFAIPFAGIMKKIQTHESQDDLSNYLRRLTEIEDEKEIRTNPLILVYGEEYYQRAPLAFYVLQLQKRGIEVEYKKREELESGDFVCVAEQWAQEYVDARYRYEEVGREGKDIKFLRILGHRE
>CP025930.1|AUR49821.1|1846994_1847954_+|glycosyltransferase
MSINTSYTKDLSIVVPIYNEEKGIPELVRRLSAAAASITEDYELIFVNDGSRDGSMELLRSLCKGDDRFFYINLSRNFGHQIAVSAGLDHVRGKATVIIDGDLQDPPELIPELYAKYREGYEVVYAQRKHREGETWFKKATAKGFYRTMRKITSIDMPLDTGDFRLIDRKIVQCLREMPEQNKFLRGQIAWMGFRQTGVLFDRDERKYGQTNYPLRKMLALAIDGITGFSSRPLEWVAQLGAWVSLLSLFVIVYALISHFLLDKTVSGWTSVIVSSMFLGGVQLICLGVIGTYISKINKNIVARPLYLVAESNIAADER
>CP025930.1|AUR49880.1|1847964_1848873_-|drug/metabolite-transporter
MTSSRLYGLAVGILSSATFGLIPLFTLPVSAKGASFELILFYRFFFAAIAIGILHRLSGGSFKVSRADIGPLVLLGFLYAGTALFLFHGYGYMASGVATTIHFLYPLFVTALMLLFFGERLSPVPLTAIFIALIGVGLLMGLTGGGDRVGLTGFVIVAISALCYALYIVFVNRSRVRIMPGRRLTFYVFVAAAGFCLINVLVRQGEVAPLPDAASWGNILLLALVPTVISNLALVVAVRNIGSTLTSALGAMEPLTSVLVGVWVFDEVLGASAIVGMGCILIAVGLIVFSEPLELMLRRRRR
>CP025930.1|AUR49136.1|1849100_1851077_-|transcription-termination-factor
MQKYTIVDLNEKAEAELAAIAGELGIANAGSMPKQELIYKILDEQAISVAGVRKEKQKTTEDRHTERRKPGRPRKNAEEEAPESKDVAAAPAEPNDEEAQAKRKRGRPRKAAEEIAEETREDVQQLVALAAAEETNATEKESAGRKPAAKTSTASPAKAPAKALPRPAETTPRVAPSPPPTTPVSEPAKDDAKPETPAPPPAIESITTTPAAGAVDEGGARRLVFRHKNSSSVLDQVLPYSSPQPPQRPKPAGAPVGSSPIRQRQAAGVPTPRREPQQPLYNFDGILECMGVLEIMPDGYGFLRSSDYNYLSSPDDVYVSQQQIKHNGLKTGDVVAGTIRPPREGEKYFPFVQLRSVNGRSPEEIRDRVPFDHLTPLFPEEKFTLEAPGIRAVNDKISVRVVDLFAPIGKGQRGLIVSQPKTGKTMLLKDIANAIAANHPEVYMIVLLIDERPEEVTDMARSVNAEVIASTFDEPAERHVKIAEIVLNKAKRMVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALQKPKRFFGAARNIENGGSLTILATALTDTGSKMDEVIFEEFKGTGNMELQLDRRLSNKRIFPAVDIMSSSTRRDDLLQDETTLNRMWILRKYLSDMNPVEAMEFVRKQLENTHTNMEFLASMSN
>CP025930.1|AUR50408.1|1851753_1852272_+|Nucleoid-associated-protein
MSLKYVIKKSVAKIGPKAGQTIYYAQPAAQDSVTFHSLCKRIAEESALTSADVKGILDRLVNILSEELPNGKTVRIGELGSFRLSFGSKQLDDPKNFSVDQIQKHRLVFIPSAELKSIPARGKLRPGSSALAFDYERVEPQPKKKPGTGDNQTPSPSTPGGGGGQGGTGGGL
>CP025930.1|AUR49788.1|1852304_1853300_+|lipoprotein
MFRISRLGIVLLVSLIACNLSKAQNTTKDLINLSIKYLEQNDSTAFRKTYQDIFMQYVTEALCAPFDKAIQDRDQTYIQARLDSLTSDPEEDAFTYHLLSKPEYQAFYYTLPRWEVYKSWIDSVERNPHADMRNEIWQIQREDQGIRILWLRLPNETGDNIRKKVRDEILLVDRQNTERAIHIIDTFGEWPGANRLGCSADQTLWLCIQHADQRPEVATRYLPMLQKAVEEKRTDPMHYAYLVDRIRMHECKEQIYGTQTYHVKEENGNKFFFVIPIEDIDHVDERRAGIGMDPLSDYVNSMGYDWDIRQYKKDLPKIWKYYRHSCKKKKN

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Crispr_ID: CP025930_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025930_8

1985121-1985214

Orphan

Consensus_repeat	Method
AACAACGTCCCAACATGGTTATATTCTGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025930_8

>merge|CP025930|8|1985121-1985214|CRISPRCasFinder
AACAACGTCCCAACATGGTTATATTCTGGGGCCCCGTATCTGAGGAGGTGAAGAGGGCTTTGATAACAACGTCCCAACATGGTTATATTCTGGG

>CP025930|8|8|1985121-1985214|CRISPRCasFinder
AACAACGTCCCAACATGGTTATATTCTGGG	GCCCCGTATCTGAGGAGGTGAAGAGGGCTTTGAT
AACAACGTCCCAACATGGTTATATTCTGGG

Protein	Signature genes	Signature genes Name	Protein_function
CP025930.1\|AUR49450.1\|1986468_1987764_+\|cytochrome-c-biogenesis-protein	unknown	unknown	gnl\|CDD\|377471
CP025930.1\|AUR50370.1\|1994757_1995303_+\|pyruvate-synthase-subunit-PorC	unknown	unknown	gnl\|CDD\|376567
CP025930.1\|AUR50269.1\|1984204_1984816_+\|cytochrome-c-type-protein	unknown	unknown	gnl\|CDD\|274453
CP025930.1\|AUR50067.1\|1993964_1994729_+\|2-oxoglutarate-oxidoreductase-subunit-B	unknown	unknown	gnl\|CDD\|239470
CP025930.1\|AUR49372.1\|1972250_1973618_-\|lipoprotein	unknown	unknown	gnl\|CDD\|379464
CP025930.1\|AUR50268.1\|1982713_1983328_-\|outer-membrane-protein	unknown	unknown	gnl\|CDD\|372635
CP025930.1\|AUR50538.1\|1980676_1981096_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225876
CP025930.1\|AUR50705.1\|1992419_1992647_+\|photosystem-I-iron-sulfur-center	unknown	unknown	gnl\|CDD\|236597
CP025930.1\|AUR49121.1\|1990166_1992188_+\|DNA-primase	unknown	unknown	gnl\|CDD\|273595
CP025930.1\|AUR49467.1\|1981311_1982589_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP025930.1\|AUR50720.1\|1979605_1979818_+\|phosphonate-ABC-transporter-phosphate-binding-periplasmic-component	unknown	unknown	gnl\|CDD\|339724
CP025930.1\|AUR49954.1\|1973720_1974584_-\|glycogen-synthase	unknown	unknown	gnl\|CDD\|377972
CP025930.1\|AUR50423.1\|1980036_1980540_-\|ECF-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
CP025930.1\|AUR49213.1\|1977760_1979434_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|341240
CP025930.1\|AUR49684.1\|1992665_1993748_+\|2-oxoglutarate-oxidoreductase-subunit-A	unknown	unknown	gnl\|CDD\|235942
CP025930.1\|AUR49098.1\|1975162_1977286_+\|ATP-dependent-DNA-helicase-RecQ	unknown	unknown	gnl\|CDD\|223588
CP025930.1\|AUR50401.1\|1988840_1989362_+\|general-stress-protein-14	unknown	unknown	gnl\|CDD\|376808
CP025930.1\|AUR50066.1\|1989358_1990123_+\|3-deoxy-manno-octulosonate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|235473
CP025930.1\|AUR50738.1\|1993768_1993948_+\|inner-membrane-protein	unknown	unknown	unknown
CP025930.1\|AUR50004.1\|1987756_1988572_+\|cytochrome-c-biogenesis-protein	unknown	unknown	gnl\|CDD\|274447

Protein	Function_ID	Function_description	E-value
CP025930.1\|AUR49450.1\|1986468_1987764_+\|cytochrome-c-biogenesis-protein	gnl\|CDD\|377471	pfam05140, ResB, ResB-like family. This family includes both ResB and cytochrome c biogenesis proteins. Mutations in ResB indicate that they are essential for growth. ResB is predicted to be a transmembrane protein.	8.75029e-06
CP025930.1\|AUR50269.1\|1984204_1984816_+\|cytochrome-c-type-protein	gnl\|CDD\|274453	TIGR03153, cytochr_NrfH, cytochrome c nitrite reductase, small subunit. Members of this protein family are NrfH, a tetraheme cytochrome c. NrfH is the cytochrome c nitrite reductase small subunit, and forms a heterodimer with NrfA, the catalytic subunit. While NrfA can act as a monomer, NrfH can bind to and anchor NrfA in the membrane and enables electron transfer to NrfA from quinones. [Energy metabolism, Electron transport].	4.90815e-72
CP025930.1\|AUR50067.1\|1993964_1994729_+\|2-oxoglutarate-oxidoreductase-subunit-B	gnl\|CDD\|239470	cd03375, TPP_OGFOR, Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor. In the TCA cycle, OGFOR catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA. In the reductive tricarboxylic acid cycle found in the anaerobic autotroph Hydrogenobacter thermophilus, OGFOR catalyzes the reductive carboxylation of succinyl-CoA to produce 2-oxoglutarate. Thauera aromatica OGFOR has been shown to provide reduced ferredoxin to benzoyl-CoA reductase, a key enzyme in the anaerobic metabolism of aromatic compounds. OGFOR is dependent on TPP and a divalent metal cation for activity.	1.14603e-83
CP025930.1\|AUR49372.1\|1972250_1973618_-\|lipoprotein	gnl\|CDD\|379464	pfam14092, DUF4270, Domain of unknown function (DUF4270). This family of lipoproteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 444 and 534 amino acids in length.	2.95464e-48
CP025930.1\|AUR50268.1\|1982713_1983328_-\|outer-membrane-protein	gnl\|CDD\|372635	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	4.11632e-12
CP025930.1\|AUR50538.1\|1980676_1981096_+\|hypothetical-protein	gnl\|CDD\|225876	COG3339, COG3339, Uncharacterized conserved protein [Function unknown].	2.30391e-13
CP025930.1\|AUR50705.1\|1992419_1992647_+\|photosystem-I-iron-sulfur-center	gnl\|CDD\|236597	PRK09626, oorD, 2-oxoglutarate-acceptor oxidoreductase subunit OorD; Reviewed.	4.72174e-13
CP025930.1\|AUR49121.1\|1990166_1992188_+\|DNA-primase	gnl\|CDD\|273595	TIGR01391, DNA_primase, DNA primase, catalytic core. Members of this family are DNA primase, a ubiquitous bacteria protein. Most members of this family contain nearly two hundred additional residues C-terminal to the region represented here, but conservation between species is poor and the C-terminal region was not included in the seed alignment. This protein contains a CHC2 zinc finger (pfam01807) and a Toprim domain (pfam01751). [DNA metabolism, DNA replication, recombination, and repair].	0
CP025930.1\|AUR49467.1\|1981311_1982589_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP025930.1\|AUR50720.1\|1979605_1979818_+\|phosphonate-ABC-transporter-phosphate-binding-periplasmic-component	gnl\|CDD\|339724	pfam16386, DUF4995, Domain of unknown function. This family around 100 residues locates in the N-terminal of some uncharacterized proteins and glucuronyl hydrolases in various Bacteroides species. The function of this family remains unknown.	0.000505396
CP025930.1\|AUR49954.1\|1973720_1974584_-\|glycogen-synthase	gnl\|CDD\|377972	pfam08323, Glyco_transf_5, Starch synthase catalytic domain.	2.3545e-64
CP025930.1\|AUR50423.1\|1980036_1980540_-\|ECF-RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	2.68352e-33
CP025930.1\|AUR49213.1\|1977760_1979434_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|341240	cd05914, LC_FACL_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL). The members of this family are bacterial long-chain fatty acid CoA synthetase, most of which are as yet uncharacterized. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.	1.38705e-148
CP025930.1\|AUR49684.1\|1992665_1993748_+\|2-oxoglutarate-oxidoreductase-subunit-A	gnl\|CDD\|235942	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated.	0
CP025930.1\|AUR49098.1\|1975162_1977286_+\|ATP-dependent-DNA-helicase-RecQ	gnl\|CDD\|223588	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair].	3.71654e-145
CP025930.1\|AUR50401.1\|1988840_1989362_+\|general-stress-protein-14	gnl\|CDD\|376808	pfam02525, Flavodoxin_2, Flavodoxin-like fold. This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) EC:1.6.99.2. These enzymes catalyze the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species. This enzyme uses a FAD co-factor. The equation for this reaction is:- NAD(P)H + acceptor <=> NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy. The family also includes acyl carrier protein phosphodiesterase EC:3.1.4.14. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP. This family is related to pfam03358 and pfam00258.	8.78157e-39
CP025930.1\|AUR50066.1\|1989358_1990123_+\|3-deoxy-manno-octulosonate-cytidylyltransferase	gnl\|CDD\|235473	PRK05450, PRK05450, 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional.	3.87112e-128
CP025930.1\|AUR50370.1\|1994757_1995303_+\|pyruvate-synthase-subunit-PorC	gnl\|CDD\|376567	pfam01558, POR, Pyruvate ferredoxin/flavodoxin oxidoreductase. This family includes a region of the large protein pyruvate-flavodoxin oxidoreductase and the whole pyruvate ferredoxin oxidoreductase gamma subunit protein. It is not known whether the gamma subunit has a catalytic or regulatory role. Pyruvate oxidoreductase (POR) catalyzes the final step in the fermentation of carbohydrates in anaerobic microorganisms. This involves the oxidative decarboxylation of pyruvate with the participation of thiamine followed by the transfer of an acetyl moiety to coenzyme A for the synthesis of acetyl-CoA. The family also includes pyruvate flavodoxin oxidoreductase as encoded by the nifJ gene in cyanobacterium which is required for growth on molecular nitrogen when iron is limited.	1.11753e-43
CP025930.1\|AUR50004.1\|1987756_1988572_+\|cytochrome-c-biogenesis-protein	gnl\|CDD\|274447	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB. Members of this protein family represent one of two essential proteins of system II for c-type cytochrome biogenesis. Additional proteins tend to be part of the system but can be replaced by chemical reductants such as dithiothreitol. This protein is designated CcsB in Bordetella pertussis and some other bacteria, resC in Bacillus (where there is additional N-terminal sequence), and CcsA in chloroplast. We use the CcsB designation here. Member sequences show regions of strong sequence conservation and variable-length, poorly conserved regions in between; sparsely filled columns were removed from the seed alignment prior to model construction. [Energy metabolism, Electron transport, Protein fate, Protein modification and repair].	3.31328e-29

>CP025930.1|AUR50269.1|1984204_1984816_+|cytochrome-c-type-protein
MARLKVVFERFGRKLLPSFRHKVFALVLVGVFVGLGAYLVYMSKAYSYLSDDPRVCINCHVMGPYYATWQHSSHAMRATCNDCHVPHNSIFSKYYFKASDGLRHSYVFTMRNEPQRMQAISASQAVIYDNCVRCHAQLNQEFVRTGMLTRADIRTAEEKACWDCHRDVPHGGKNSLSATPNGIISYPKSPVPQWLRAYISKKK
>CP025930.1|AUR50268.1|1982713_1983328_-|outer-membrane-protein
MKKMILAATMLFATIGFANAQSRPALRLDANFVGSNLMQKVANTSVNNKMIVGLRVGAAAEFALSNDGFYLAPGLAYTMRGAKMESLSETTTRLHYLQIPVNAGMRFSFADNMAISLEAGPYFAYGVAGTIKTKVAGVTASVDAFGDNGYNRFDLGLGLSAALSYDRYYVQIGYEHGLLNMLKDAPDKTSLRNHDFFVGLGVRF
>CP025930.1|AUR49467.1|1981311_1982589_+|enolase
MEIVKIIGREILDSRGNPTVEVDVHLACGIIGRAAVPSGASTGENEAIELRDQDKARYCGKGVLKAVKNVNEVIDPALCGMSVLEQTAIDRKLIELDGTKTKSNLGANAMLGVSLAVAKAAAAYLDIPLYRYIGGSNTYVLPVPMMNIINGGSHSDAPIAFQEFMIRPVGACCFREGLRMGAEVFHALKKVLHDRGLSTAVGDEGGFAPALNGTEDAIESILKAVEAAGYVPGKDITIAMDCASSEFFKDGIYDYTKFEGEKGKKRSIDEQVAYLTELVGKYPIDSIEDGMSENDWEGWKKLTVALGDKVQLVGDDLFVTNVEFLRRGIAEKCGNSILIKVNQIGTLTETLNAIEMAHRHGFTSVTSHRSGETEDTTIADIAVATNSGQIKTGSLSRTDRMAKYNQLLRIEEELGPCAVYGYKKV
>CP025930.1|AUR50538.1|1980676_1981096_+|hypothetical-protein
MKRNHLQKRRQPARKGFVDKLPTTLADISYYASYYQENALVNKVLKYCRLIGRFGTGQVLTLYYMLQAGEITMKEKLLLAGALGYFLLPFDLIPDIALPLIGFTDDLAVTSIVLRILHRRITPAIREKARLRAATIFED
>CP025930.1|AUR50423.1|1980036_1980540_-|ECF-RNA-polymerase-sigma-factor
MNSVQFREKLLSLQDNMRNFALTLTANRDDAEDLLQDTTLRVLHNEDKFVDNVNFKGWVLTVMRNIFINNYHKLVRSQTVIDPNSDPYNVPLLNEGGEDTPDGTMTIKEITAAIASLNETLKQPFSMYVSGYKYNEISETLGIPLGTVKSRIFLARQELQQQLKDMR
>CP025930.1|AUR50720.1|1979605_1979818_+|phosphonate-ABC-transporter-phosphate-binding-periplasmic-component
MKKFVAFAAVIAAVSFASCNSQAKTEEAADSTAMDSATLVEDAAPVVDTAAMQIDSAAMKAEEATEQAAQ
>CP025930.1|AUR49213.1|1977760_1979434_+|long-chain-fatty-acid--CoA-ligase
MIEQNFIRLYQDSFREHWALPALTNYDTKESYTYGEMAADIARRHLLFERIGLKPGDKVALLGKDSAEWCMAFMSVITYGAIIVPVLPDFNAADAASIVTHSDAKYLFVSDKIWETMDPSQLLLLCGAVSIRDYTVFLDRTEGGLLSREVKGLSRSFSERYPSGFTAEDIRYAEVSNDDLILLNYTSGTTGFSKGVMLRANNLAGNVTYVKDRDIMFRGETILCFLPLAHTYSCAFNFLTPLTIGVHVYILGKIPSPLTLIKAFADVHPSFVIMVPLIIEKLYHKAIAPKIKTPLIKFLLRLPVLRKVIHKSIRSKLIESFGGNFRQIIIGGAALNDEVAHFLYRIGFPLTVGYGMTECGPLISYEDHSLWLPGSCGKSLSIMEARIDHSGQERHSDSGDVGEIQVRGENVCLGYYKNAELTAELFTPDGWMRTGDLGTIDSLGNIFIKGRSKTMLLGSNGQNIYPEEIESKINNLSYVLESIVTERDGRLIALIVPDRQAIEHKGISPDQAWAYIERSRAELNGQVGAYEKITAFVRHDEEFEKTPKRSIKRFLYT
>CP025930.1|AUR49098.1|1975162_1977286_+|ATP-dependent-DNA-helicase-RecQ
MSEELQHLPPGERLYPLSTDMKELPDRYLHGEVYDHEQSDEIGGEEEDFLPPMPEVFSNEIEAPSLHTPEEVLLHYWGYPSFRPVQLPIIESVLAGKDTLGLLPTGGGKSITFQVPGLLLPGLTLVVTPLIALMRDQVMGLRQKGIKATAVHAGMTREQIITTLDNCIYGRYKFLYVSPERLGSELFLSRLHALRVSLLVVDECHCISQWGYDFRPAYLSIADIREALPDVPVLALTATATRPVIDDIQRILRFPEPNVLRKSFFRPNLSYSIRRTADKETMVLHILSRVDGSAVVYCRNRDKARDLARFLGENGFSADFYHAGLNHVTREIRQKSWMEGETRIIVCTNAFGMGIDKPDVRLVLHMEMPSSPEEYFQEAGRAGRDGERAYAVLLAGEDDIFNLKRRVSNEFPPREYIATVYNRICNYLQIGEGEGFERSFDFDIDAFCRNFRMFPTQVLAAIRILDVAGIWEYREEKTRSRLTIQVQRDELYRMRSEQASDSVLTALMRTYDGLFADYVSIVESELAEKTGLSVDQVYQQLLLLNKAGIVNYIPQKNLPRIYFLTRREDAELLQIPRAAYEDRRDRLKARIDQSLRYIEEENTCRSRMLLAYFGEEQSHNCKLCDVCLRRKDGELHHHEVDDLLHFLEQRLTEETPYVLIADICREVHHHPDVVLKAIRFVMKESWQYSTDGDTVFLTHKLPGGLNL
>CP025930.1|AUR49954.1|1973720_1974584_-|glycogen-synthase
MSFFCTFARNVDDGKRMDSKKILYISQEIFPYLPETDISVVSRKLPQTIQERGNEVRIFMPRYGIINERRNQLHEVIRLSGINMIINDNDHPLIIKVASIQSARMQVYFIDNDDFFKRKTMYDIKPKQENDNDERAIFFVRGALEAIKKLRWIPDVIHCHGWFTALAALYLKKMYADDPCLQKAKVVYSVYDDAGQGVIPETLFGKLGFDKITPDDLSVMEQSSDYLALNRLAIRYADGVIQGSETIAPELTDYISSLEGKAFLPYQGKEDYEEAFDNFYTALLTAN
>CP025930.1|AUR49372.1|1972250_1973618_-|lipoprotein
MKRYLLLVFSLMALLTVACDDDLSPIGGSIQPPSDPVSARVDTLEFSVKTIPMGDIYNRTNYTLLGDLTDPEYGDLKADYIMQFKSPRNFKFKYPPKDGKIDSVKLSINYDSWAGDSTSIMKVSIYKINKAIPPSYYSTQELASLLDETQIIASQTFKAGNDSAFHRVRIPLPNEIGQKIYDLSVNNPSVFDTQESFYNNVLGGLYVTTTTGTGVVLSVYNTQMAIFYSYKVAADSTATASETFVNTSESYQVNHIKNSQISHLLQENDSLSCVKSPAGVMTQLTISKEQFTDAFTSNLSSSLAWQIGEAQFNISASKPSEGLMLSPPSYLLLLPQDSVRNFFEQEQTELMQPRTAFLSTIYNIKKREYRFSNISRLLMEHIKNNTEKTPEGKPYITKDLVLVLLPVKRQVAGASNSLYTSQLNNFMFPSGVKLQLGKKNKTARIGVYSMTYTDN
>CP025930.1|AUR49450.1|1986468_1987764_+|cytochrome-c-biogenesis-protein
MWQGRFGYREGIFIISGLAFVGLLLQVIAGPIPATAFAYPFNLVGGSLLLAGILFWGIFHRRAIRRNSARFSFLSGHIATLTSIGGLLLLAVIMGLTKQIPAEMGRGLQHPIHRLGLSSMLSAWYFLLLYLYLLFVLGCVTTDRLMRLKLNLRDGAFVMNHVGLFVALFFGLMSSADIRQYRMQVYSDSDYPEWRGIDQRTKKMVELPVAIELKKFEITEYPPKLMIIRNNSGKALPYSRPAHLSIDRTPSKGTIDRWQIEVLAHLPYSAAVVTKDSVVFREFRSLGAVHSARVRAANLDFPQEVVSGWVSSGSHVFPYRSLRLTDSLSLVMAESDPKQYSSQVYLYAENGEIDSATILVNKPLRYRGWYIYQLSYNREQGRWSTMSELELVKDDWLYGVYTGIGLLLIGAAMLFLGPIPASTQAKREDHD
>CP025930.1|AUR50004.1|1987756_1988572_+|cytochrome-c-biogenesis-protein
MIDILPLLDWHHFVYFAIPAVLLLIVSALFALYQRRVWAICIAIAAACVLMFFIGGMWHSLERPPLRTMGETRLWYSFFVIIAGLIIYIRWKYRWILSFATVLSTVFMIINIAKPDIHNKTLMPALESPFFVPHVISYIFAYAMLRAALLVGGYFLFCKRKHKEVNTKVLMHTTDNLVYTGFAFLMTGLLLGAIWAKLAWGTYWNWDPKETWAAITVFSYLLYIHHRLHRPRAFAHSLVLLIVSFLFLQICWYGVNYLPSAKDSSIHTYTR
>CP025930.1|AUR50401.1|1988840_1989362_+|general-stress-protein-14
MKKTLVIVVHPDLTKSVINKAWAKAIEGAATIHHLYEQYPNGQIDLAHEQALLEAHDRIVFQFPLYWYAAPYLLKKWMDEVFTEGWAYGAGGDKMEGKEICAAVSCGSPKSAFAEGAQQCHTLRSYLNVFDGIAAFLRARFTGYHACYDSYNPRLPEMLPANCEAYLRFIKGE
>CP025930.1|AUR50066.1|1989358_1990123_+|3-deoxy-manno-octulosonate-cytidylyltransferase
MNTEVIAIIPARFASSRFPGKPLADMLGKSMIQRVHERIAGVVPRAVVATDDERIRQAVEDFGGEVVMTSPECSSGTERCREAFDKVGRGEKIVLNLQGDEPFIQKEQIDLLISAFDKPETDIATLAEVFSSDASFERLNNPNSPKIVLDHGGYALYFSRSVIPYLRGVQPDSWCRRHTYYKHIGIYAFRPTVLRKITSLPQSTAEQAESLEQLRWLEYGYRIRVLQTQQSTIGIDTPEDMDKAIAYLRSQGME
>CP025930.1|AUR49121.1|1990166_1992188_+|DNA-primase
MIDDLTRERILDAANIVEVVSDFVSLRKRGVNYLGLCPFHSDRNPSFSVSPAKNLCKCFACGEGGSPVHFIMKIEQLSYSEALRYLARKYGIEIHERELTDEEKRLKSDRESMFILNEFANDFFKNNLLNTIEGQTIGMTYFRQRGIRPETVQKFQLGYDPEKRSAFSDEAIRKGFKPEYLVDTGLSIRYEDSKALDDRFRGRVIFPVQTVSGKIVAFGGRILGKKDKAAKYVNSPESIIYSKSKELYGLFLAKKEIARRDKCFLVEGYTDVISMHQSGIENVVASSGTALTQQQINQIHRFTSNITVLYDGDAAGIKAALRGINLLLEQGMHVKVVLLPDGEDPDSFARNHTITEFEEYIKQHETDFIRFKTQLYLSDMERDPIRRAQLITDIIGSIALIPDDITRRVYVQETGQTLSMDERLLAREVQKMRFRRSTYSSPPPPTQQPANGSERKNDSDNLVGTENHSAETPTDNRSAEVGQPYYPAKYEEELLRLIIRYGERKLLIYRHEEGAEKQTPSEVALAYYIKSDLNADGVDIGTDVFRQILDEAAEQSFDSGFVAAKYFRDHPNAQISHIAVELLTNRYALSRIHYGKGDESNAEEDLQMRVERELLTIKNVFIQVQIRALQKEIAQAQKAGDIELQLEIMNELRSMNEMKSELAHRLGDRTVLP
>CP025930.1|AUR50705.1|1992419_1992647_+|photosystem-I-iron-sulfur-center
MAKIRGAVVVNTQRCKGCNLCVVACPTKVLELHPNEVNDKGYHYSYMKDPESCIGCTSCATVCPDACITVYKVKL
>CP025930.1|AUR49684.1|1992665_1993748_+|2-oxoglutarate-oxidoreductase-subunit-A
MTEEIRLMKGNEALAHSAIRNGVDGYFGYPITPQSEVMETLMEEHPWDTTGMVVLQAESEVAAINMVYGGASCGKMVMTSSSSPGMSLKQEGVSYCAGAELPCLIVNVMRGGPGLGTIQPGQADYFQSVKGGGHGDYRLITLAPNSVQEMVDFVGLGLELAFKYRNPALILSDGIIGQMMEKVILPPFKKRRTEDEIRKQCPWATLGRKGGRQPNIITSLELDSAVMEQNNLRFQKKYAEIEANEVRYEEYQTEDADYILVAFGSSARICNKTVQLARQQGIKAGILRPITLWPFPTKEIAKLADRAKGFLVAELNAGQMIEDVRLAVNGKVPVEHYGRMGGMLFSPDEILQALKEKVIK
>CP025930.1|AUR50738.1|1993768_1993948_+|inner-membrane-protein
MDLKKVNGILTIVFYLLLVLTVAMFLFYRQTEQRWLYLIPGVVAVAVRVTGYFISSFKR
>CP025930.1|AUR50067.1|1993964_1994729_+|2-oxoglutarate-oxidoreductase-subunit-B
MEINDIIKPENLVYAKPTLMNDTDMHYCPGCSHGVVHKLIAEVIEEMGLTEETIGIAPVGCSVFAYRYIDIDWQEAAHGRAPALATAVKRLNPSKLVFTYQGDGDLAAIGTAETIHAANRGENIAIIFINNGIYGMTGGQMAPTTLEGMATATCPQGRNVELNGYPLKIADMLALLDGTCLVTRQTVHNAAAVRKTKKMIQKAFENSMNRKGTSIVEVVSTCNTGWKMSPAASNDWMMENMAKQYPLGDLKNID
>CP025930.1|AUR50370.1|1994757_1995303_+|pyruvate-synthase-subunit-PorC
MTYEIVIAGFGGQGVLSMGKILAYSGLMEDKEVSWMPSYGPEQRGGTSNVTVIVSDEQVSSPVLNEYDIVIVLNQPSLDKFEPRVKKGGILVYDPDSIVLKNKRDDIQIYEVDATQESLRMGNQKAFNMIVLGGVLKVAPMVKIESVIKGLKKTLPERHHKLIPMNEQAIQRGMEIIKQIH

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Crispr_ID: CP025930_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025930_9

2155417-2155525

Unclear

Consensus_repeat	Method
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025930_9

>merge|CP025930|9|2155417-2155525|CRISPRCasFinder
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGAGAAGTTTTAAGATCTCTTTCAGAAAAAAATCTGAGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG

>CP025930|9|9|2155417-2155525|CRISPRCasFinder
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	AGAAGTTTTAAGATCTCTTTCAGAAAAAAATCTGA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG

Protein	Signature genes	Signature genes Name	Protein_function
CP025930.1\|AUR50026.1\|2166349_2167141_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319986
CP025930.1\|AUR49677.1\|2144440_2145526_-\|transposase-in-ISPg8	unknown	unknown	gnl\|CDD\|377531
CP025930.1\|AUR50288.1\|2169664_2170264_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
CP025930.1\|AUR49641.1\|2149608_2150700_-\|hypothetical-protein	unknown	unknown	unknown
CP025930.1\|AUR49128.1\|2152331_2154338_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378965
CP025930.1\|AUR49468.1\|2165068_2166346_-\|hypothetical-protein	unknown	unknown	unknown
CP025930.1\|AUR49711.1\|2147765_2148818_+\|hemagglutinin	unknown	unknown	unknown
CP025930.1\|AUR49910.1\|2157541_2158444_-\|transposase-in-IS195	unknown	unknown	gnl\|CDD\|372648
CP025930.1\|AUR49927.1\|2142426_2143311_+\|Beta-barrel-assembly-enhancing-protease	unknown	unknown	gnl\|CDD\|274350
CP025930.1\|AUR49051.1\|2167218_2169624_-\|exporter-RND-superfamily	unknown	unknown	gnl\|CDD\|223964
CP025930.1\|AUR49203.1\|2161536_2163243_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
CP025930.1\|AUR49712.1\|2150912_2151965_+\|hemagglutinin	unknown	unknown	unknown
CP025930.1\|AUR49190.1\|2163289_2165044_-\|iron-import-ATP-binding-permease	unknown	unknown	gnl\|CDD\|224055
CP025930.1\|AUR49909.1\|2155702_2156605_+\|transposase-in-IS195	unknown	unknown	gnl\|CDD\|372648
CP025930.1\|AUR49983.1\|2146362_2147202_-\|modification-methylase	unknown	unknown	gnl\|CDD\|273146
CP025930.1\|AUR49201.1\|2159030_2160740_-\|serine-protease-carboxy-terminal-processing	unknown	unknown	gnl\|CDD\|223864
CP025930.1\|AUR50101.1\|2145629_2146370_-\|mu-like-prophage-protein-gp29	unknown	unknown	unknown
CP025930.1\|AUR49911.1\|2171480_2172383_+\|transposase-in-IS195	unknown	unknown	gnl\|CDD\|372648
CP025930.1\|AUR49180.1\|2139568_2141365_+\|H(+)/Cl(-)-exchange-transporter	unknown	unknown	gnl\|CDD\|238233
CP025930.1\|AUR49784.1\|2141325_2142324_-\|small-conductance-mechanosensitive-channel	unknown	unknown	gnl\|CDD\|182386

Protein	Function_ID	Function_description	E-value
CP025930.1\|AUR50026.1\|2166349_2167141_-\|hypothetical-protein	gnl\|CDD\|319986	cd16329, LolA_like, proteins similar to periplasmic molecular chaperone LolA, the outer membrane lipoprotein receptor LolB and the periplasmic protein RseB. This family contains uncharacterized proteins similar to the periplasmic molecular chaperone LolA, the outer membrane lipoprotein receptor LolB and the periplasmic protein RseB, all of which have similar unclosed beta-barrel structures that resemble a baseball glove-like scaffold consisting of an 11-stranded antiparallel sheet. There are five Lol proteins (LolA, LolB, LolC, LolD, and LolE) involved in the sorting and membrane localization of lipoprotein and are highly conserved in Gram-negative bacteria. LolA accepts outer membrane (OM)-specific lipoproteins that are released from the inner membrane by the LolCDE complex and transfers them to the OM receptor LolB. It is proposed that the LolA/LolB complex forms a tunnel-like structure, where the hydrophobic insides of LolA and LolB are connected, which enables lipoproteins to transfer from LolA to LolB. RseB exerts a crucial role in modulating the stability of RseA, the transmembrane anti-sigma-factor that is degraded during sigma-E-dependent transcription caused by bacterial envelope stress. Its structural similarity to LolA and LolB suggests that RseA may act as a sensor of periplasmic stress with a dual functionality, detecting mislocalized lipoproteins as well as propagating the signal to induce the sigma-E-response.	2.00862e-82
CP025930.1\|AUR49677.1\|2144440_2145526_-\|transposase-in-ISPg8	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	1.30882e-23
CP025930.1\|AUR49190.1\|2163289_2165044_-\|iron-import-ATP-binding-permease	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	8.94518e-134
CP025930.1\|AUR49910.1\|2157541_2158444_-\|transposase-in-IS195	gnl\|CDD\|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	5.98312e-101
CP025930.1\|AUR49927.1\|2142426_2143311_+\|Beta-barrel-assembly-enhancing-protease	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	4.85962e-15
CP025930.1\|AUR49051.1\|2167218_2169624_-\|exporter-RND-superfamily	gnl\|CDD\|223964	COG1033, COG1033, Predicted exporters of the RND superfamily [General function prediction only].	3.51439e-68
CP025930.1\|AUR49203.1\|2161536_2163243_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	6.86314e-136
CP025930.1\|AUR49128.1\|2152331_2154338_-\|hypothetical-protein	gnl\|CDD\|378965	pfam12836, HHH_3, Helix-hairpin-helix motif. The HhH domain is a short DNA-binding domain.	0.000758907
CP025930.1\|AUR49911.1\|2171480_2172383_+\|transposase-in-IS195	gnl\|CDD\|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	6.2616e-101
CP025930.1\|AUR49909.1\|2155702_2156605_+\|transposase-in-IS195	gnl\|CDD\|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	5.14725e-101
CP025930.1\|AUR49983.1\|2146362_2147202_-\|modification-methylase	gnl\|CDD\|273146	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam). All proteins in this family for which functions are known are DNA-adenine methyltransferases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The DNA adenine methylase (dam) of E. coli and related species is instrumental in distinguishing the newly synthesized strand during DNA replication for methylation-directed mismatch repair. This family includes several phage methylases and a number of different restriction enzyme chromosomal site-specific modification systems. [DNA metabolism, DNA replication, recombination, and repair].	1.52398e-117
CP025930.1\|AUR49201.1\|2159030_2160740_-\|serine-protease-carboxy-terminal-processing	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	4.89456e-86
CP025930.1\|AUR50288.1\|2169664_2170264_-\|transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.18078e-10
CP025930.1\|AUR49180.1\|2139568_2141365_+\|H(+)/Cl(-)-exchange-transporter	gnl\|CDD\|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	8.02953e-102
CP025930.1\|AUR49784.1\|2141325_2142324_-\|small-conductance-mechanosensitive-channel	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	2.40966e-59

>CP025930.1|AUR49128.1|2152331_2154338_-|hypothetical-protein
MRLLPAVVCAIILLSLPLGGQTVVPEWDEYIAEQIESGAIGEDEGAEFLERWMVQKQHPLDINTLTREDLEQFPFLNEFQIRRFLLYRHAHPEGFDSIWVLNEIAGWDRRTCLLLWPMLTVQKRSESAADSFREILSYARHDVSVHTDAILQRQEGYRPDSRHPYRGDPWGGGLRWSYAMGNRFSLGLTASKYRGEPAFDKRRKGFDSYSAHFFMQGKGAVRAVALGDYRIGMGYGLLINQASFMGMAYAYPRGGTTLRRAFTYAEDNFMRGAATALAQGRWALTAFYSRKGIDATVTEDGAIKAIYHTGLHRTDAEIARRNAATMTTAGTSVSYTDDRLRLTFNLLHLHWGGLRLLRAVGTQGIASLTDLERFSLVSADYSYLFGQGEAELFGEFAGAANGAVGTINGLRYTHPVGGSYMLVGRYIPADFWSYYRGAFARYSRPGNEWGVMGRAAWELPSDRTVRAFADYYGSFVPRFGRKEKTEALYWMLEGEKSLSALSWSCRIRGTADKRYRRSLAVRLRGRYMFDERWRLMASLQWSRSSSFDGELQAWQAPTGGKSFALRADYSGGKLLRVCSMDAVAFDTDSFADRLYEAVYNPRHHYSSAFFYGRGVRLGVFVRIAPLPHVEVESRIDHLLRRDTDTIGSAGELIRGQARTHLFMTVRYR
>CP025930.1|AUR49712.1|2150912_2151965_+|hemagglutinin
MTAEIFSFSRLQNLEHYRFAKNVLTLCRTANIAKLNPKLPELEKAIEMEDLALNPPVANELTPQVIALDEERDRAYQALMSRVRSYAFDEDSQLRNAAARIEDVAARYGNVIRMNYDKETAAIENFLTDLKGENIRPLVTKLGVTALVDRLEKNNKAFADFFLRRLSTDQRGKYDVKALRAETDRTLVAVVRRMDSIDDMEPSPEIRALIELYNRLVANRRALLARRASYGEAAVEKRRAEIAEMLRPLLARIVEEKKTAVFAGRTLGTGKNRHYLITFVAENGDEEDRWYRINGEQLVYVPEDELPKPKKKKKPASSTDTPSEPPVLPDPSQGGSSSGGGEQGSTGGGL
>CP025930.1|AUR49641.1|2149608_2150700_-|hypothetical-protein
MQNAQSEKNLKIFFDGNKIFLLLPRISKFRIRRCRNIIPKYSKMKKSFVVGASLCIAAIFSLVSCSKQEIEEVRVMENETIKTDLPQARSIEDSVALAELVLDLETYNSSLDSDGRSTYSAGQQTFSVEGQLMNNRSFWSFFKKIAKAVAVVSADAIGVCVGSTIHPAMGVAFCATASAGTSVLLDADINVSFLKESFGPDITRSNYGVWHNNTIAAYLNEHGSLTNLDPLQFYNYSLTYCSNNIGSSTSRPLPYEKVETLCSALAQLFTSLENDNSEKTEEEICNMIVSAVPEIRAQEVKILLNFLLKMYSPDFKVEKRREYIAGHTEVVFQSRLSEAGKKRIYDMLSVACNSSLLWKQSEK
>CP025930.1|AUR49711.1|2147765_2148818_+|hemagglutinin
MTVENLRLQRLQNLEHYRFAKNVLTLCRTANIAKLNPKLPELEKAIEMEDLALNPPVANELTPQVIALDEERDRAYQALMSRVRSYAFDEDSQLRNAAARIEDVAARYGNVIRMNYDKETAAIENFLTDLKGENIRPLVTKLGVTALVDRLEKNNKAFADFFLRRLSTDQRGKYDVKALRAETDRTLVAVVRRMDSIDDMEPSPEIRALIELYNRLVANRRALLARRASYGEAAVEKRRAEIAEMLRPLLARIVEEKKTAVFAGRTLGTGKNRHYLITFVAENGDEEDRWYRINGEQLVYVPEDELPKPKKKKKPASSTDTPSEPPVLPDPSQGGSSSGGGEQGSTGGGL
>CP025930.1|AUR49983.1|2146362_2147202_-|modification-methylase
MAKNKLIAPFLKWVGGKRQLIPEIKNLLPKGILSHPYYEPFIGGGALLFELQPKNATINDYNEELINVYKVIRDNPHELIEDLKKHKNTAEYFYEIRAIDRNPLFINLTDIERASRIIYLNKTCYNGLYRVNNAGEFNSPFGKYKNPNIVNEPVIKAVSKYLNTAKIQIFNGDYQTILKDIPRSSFVYLDPPYHPISQSANFTGYVQGGWDEKDQIRLRNVCNTLNERGIKFLLSNSSSDFIKEIYSDYNIYVVQATRAVNSDSSKRGQVSEFLINNYE
>CP025930.1|AUR50101.1|2145629_2146370_-|mu-like-prophage-protein-gp29
MSKSKNDLAWEAIFERYSLLDELAKNGRVSISSEKINEFRESRLMTKFDHRSQLPDLFGKHKLSILPTSRGTYEIGPFETFCDFNKDEIGIMSMPFRSDLESIDYKDITSESAAINCAFVCSILQDFTGEEALFPTVSGRMGSSSFEFTINSGSKKVKIDVENSQIEIDGGYEGENSLALIEAKNYISDDFLIRQLYYPYRLWSNKITKRVRPIFLTYSNGIFHLREYEFSAPELYNSIRLVQHKK
>CP025930.1|AUR49677.1|2144440_2145526_-|transposase-in-ISPg8
MAYQSKNTDEHVTFADALLSKRYRKAQNDFLNQVDTLIDWRPIRTLINKKYTKRQNAIGAPAYDVILLFKMLLLETWYNLSDCALEERINDSITFSRFLGLKMEEVSPDHSTISRFRSALTELGLMDKLLAQFNKQLSRHHISVREGVLVDASLVETPHKPNGSITIEVADDREDNRSEAEKEAEEDYQKQVVRQRKGTDEEARWVYKQKRYHYGYKKHCLTNVQGIVQKVITTAANRSDTKEFIPLLEGANIPQGTAVLADKGYACGENRSYLQTHHLQDGIMHKAQRNRALTEEEKQRNKAIGPIRSTIERTFGSIRRWFHGGRCRYRGLAKTHTQNILESIAFNLYRTPGIIMSSSVG
>CP025930.1|AUR49927.1|2142426_2143311_+|Beta-barrel-assembly-enhancing-protease
MTDRFLRILRLSALCLLFSTLLPPLFGQPTTARQDSLPADYTRLIDRSFEALGQGNLELAEQALRQAIKAYPDLPSGYALMNNLGAIQQRQGKPEEALLTYSAALQKLPDDKLLRTNRAMLLTEMGRTDEAIFDYNELLRAEPDNEIFHYGRAMLYLAKGMYGDAESDLEEILRINDSSLKARLGIALVATMKGEYDKAERLYNYVIDKLPKNAAAYEGRARLFLNKGMKGYALRDINKAFECATPPAASLFVLRGEINAAIGDKKAAADDYAAAESRGYSKESLDVLRAALRK
>CP025930.1|AUR49784.1|2141325_2142324_-|small-conductance-mechanosensitive-channel
MGLKILFPLQNLPVDTTKVNKIAEVVSPEALKQIKEIKPSQWTELLTQWGGKALSFGIKVLIALVAFYLGKLLLNALVKWLDRIMVRRSFEPAARTFLRSFANIGGFVLLIVIIISTLGFQPVSLAALLASVGVAVGMGLSGQLQNLAGGLIVLLTKPFKVGDYIVSNNVEGVVDGVTLFHTTVMTFENKYIFIPNGLLSSNVIINYSRMAVRRNEWIIGIEYNEDFDRVKTLLLRLIDEEPRIIKDPLPAVVLKELADSSVRVMARAWCATDDLWNVYWDINERIYSEFNRQGIAFPFPQLTIHGSAAGQERRGKSTEAQSPENVSTNTSL
>CP025930.1|AUR49180.1|2139568_2141365_+|H(+)/Cl(-)-exchange-transporter
MKDKETSRYGWFLHFLLWRERHINERLFLIILSLIIGILSAFAAVLLKNTIHIIQHFAFDRIRETSYLYLIFPVVGILITWLFVRYVVRDDIGHGVTKILFAISQRKSRIKPHNMWSSLAASSITIGFGGSVGAESPIVLTGAAIGSNLGRLFRMEQKTLMLLVGCGAAGAISGIFKAPITGLVFVIEVLLLDLTMSSVLPLLISSVSAAAVSYIITGQGAMFSFTLNDPFSMDRIPYALLLGVFCGLVSFYFSKVMFVFESKLKNFPHYRQRYLISAFILCGLIFLFPPLYGEGYDTINALLGGQYSSLMDGSLFEPYSNSYWVLFVFLGFIIITKVFASVATNSGGGCGGLFAPSLFMGALSGFIFAYALNFFPFIEVYLPQKNFALLGMAGVMAAVMHAPLTGIFLIAELTGGYNLFLPLMLVSTSSYATIRLFMPHSIYSLRLAQKGKLLTHQKDKAVLTLMTLDAVIEKDFEPVKPDMTLGDVVHVFGISHRNVFPVLDENNLLMGLVLLDNIRNIMFRPELYERFKVSRFMVSPPAKIVNTMSMETIMRIFDDTKAWNLPVIDEQGCYLGFVSKSKIFNSYREVLVETFSGD
>CP025930.1|AUR49909.1|2155702_2156605_+|transposase-in-IS195
MKTNIVDVFCIIDDFSKLFDEAIKKRTLEEADKKRRNRKFKMSDSEVMTILILFHLSRYRDLKAFYLQYITHSCRSEFPHLVSYNRFVELQSRVGFKLIAFLNMCCLGQCTGISFIDSTPLKACHIKRAHGHRTMRGWAQKGKSTMGWFYGFKLHIVINDRGEIINYQITPGNCDDREPLKDGTFTKNLFGKLIADRGYISQNLFDRLFVDDIHMITKIKKNMKNSLMHLYDKVLLRKRALIETVNDMLKNVCQIEHTRHRSVNNFVTNLISGIIAYNILPKKPELNIEIIRNPNFPISA
>CP025930.1|AUR49910.1|2157541_2158444_-|transposase-in-IS195
MKTNIVDVFCIIDDFSKLFDEAIKKKTLEEEDKKRRNRKFKMSDSEVMTILILFHLSRYRDLKAFYLQYITHSCRSEFPHLVSYNRFVELQSRVGFKLIAFLNMCCLGQCTGISFIDSTPLKACHIKRAHGHRTMRGWAQKGKSTMGWFYGFKLHIVINDRGEIINYQITPGNCDDREPLKDGTFTKNLFGKLIADRGYISQNLFDRLFVDDIHMITKIKKNMKNSLMHLYDKVLLRKRALIETVNDMLKNVCQIEHTRHRSVNNFVTNLISGIIAYNILPKKPELNIEIIRNPNFPISA
>CP025930.1|AUR49201.1|2159030_2160740_-|serine-protease-carboxy-terminal-processing
MKKTNLFLSLLVIFITGSFMTACAQKSKTNKLTEEDRSRNEYVQSMDVLSNIIGNVRLYFVDTISIKHMTRRGIDAMLGGLDPYTEYIPYEEMDELKLMTTGEYAGVGAIISQRPDSAVIIQRPMEGMPADEAGLIAGDRILTIDGKDFRKSTTPKVSQALKGIAGTVAKVTVMRYGETKPRTFSVKRQKVIMNSVTYSGMLDGSIGYIRLNNFTDKSAEEVRTALLDLRDKQGAKGLILDLRGNGGGLMQAAIEIVNLFVPKGKEVVTTKGRIAESASVFRTLTEPIDTKLPIVVLIDGQSASSSEIVAGALQDMDRAVLMGQKSYGKGLVQTTRQLPYNGVIKLTTAKYYIPSGRCIQRLDYSRTNRTGMATAIPDSLHKIFYTAAGRRVEDAGGILPDIEIKQDTAATLLYYMAINNDVFDFVTGYVLKHKTIAKPEDFSITNEDYAAFCKMMEEKKFDYDRQSGKMLDKLEELAKIEGYLPEANSELKALREKLKPNLSRDLLRFKKEITNHLNNEIVTRYYYERGSIRQSLPEDKVVKEAIKLLKDHPEQIRQILAAPKAENKG
>CP025930.1|AUR49203.1|2161536_2163243_-|ABC-transporter-ATP-binding-protein
MIRYFQHRFALSRKGAQDLAKGIAWTTVLNVGFMLPAIFTFLFLEDYLQGSATHGIWYYIAMGAAFMAVLFVIALFQYTSLYTKIYTESANRRIALAEKLRKLPLAFFGEKNLSDLTSTMMEDSTVMETVFSHSIPQLFASLVSLFLIGIGLFCYNWQLSLALFWVVPVAALAIVFSKKMLNKSFRSNYHVKREVTEHIQEGIEEIQEIKSYNGEEEFAERFDAKLHAYEKSLIRCELVVGAVLNASYIILKLGLASVIIIGAYLLSEGTIDLFTYLVFLLIGSSIYNPISEVFSNLLLLQYLDVRIDRVREMDAMPIQEGKTDYSVRNFDIIFQNVNFSYEKGKQVLRNVSFTAKQGEVTALVGPSGGGKSTSAKLAARFWDIDGGKIFLGGEDISQIEPETLLRHYAIVFQDVLLFNASVADNIRIGKPDATDEELKRVARLARCDEFVDRLPNGYDTLIGENGENLSGGERQRISIARALLKDAPIVLLDEATASLDVENETLIQAGISELIKNKTVLIIAHRMRTVANAHKIVVLKEGTVAECGSPAELMAMNGVFARMVAAQK
>CP025930.1|AUR49190.1|2163289_2165044_-|iron-import-ATP-binding-permease
MNDTINKIKAYMGNRAILLPVSLVLSGLNGLVSLVPFVLIWLIVRTLLGGEGAIEDNRVFVYAWWAVGIAAFGVLTYFLSLSLSHLAAFRVEVNMRREAMHRVVRMPLGYFDKRLSGKMRKVIDEDSSQTHTFIAHILPDVIGSMMAPVGVLVLIFIFDWRLGIACLLPIAFAVGAMSFMLNPKQNKFQRRYLDAQEKMSSEAVEYVRGIPVVKVFQQSVYSFKRFYQSIIEYKKLVTEYTLGWQKPMAFYVMFTNSFAFFLVPVAIWLIGRTGNTVDIIADMFLYLLITPVFTTNIMKMASLSQNLFLLNEAVTRLENLTGEEPLATLERPQTPVTNEVSFDHVTFRYTGAVQDAVSDIDFSIPPGQTYALVGTSGGGKTTIARLIPRFWDATQGHIRIGGVDVRDMAKEELMDRISFVFQNAKLFRTTIRENITYGSPDASEDALARAIDLSQSREIIERLPDGLQTKIGADGTYLSGGEQQRIALARAILKDAPIVVLDEATAFADPENEKLIQQALHELTKGKTVLMIAHRLTSVQHVDRILVIEKGRIAEQGTHEELLTQGGLYKSMWEEYQRSVSWTL
>CP025930.1|AUR49468.1|2165068_2166346_-|hypothetical-protein
MEVKKNTVVLRLLIWFVAILLFHSSRLWGQEGEGSARYGFKGFVDTYHAVRSSSPFDFMSSRTRVRGELERSFGNSKVAVSVNATYNALLKDETGLRLREAFFEHQEEHWGLRLGRQIVIWGAADGVRITDLISPMDMTEFLAQDYDDIRMPVNALRFSVFNESMKVEVVVLPVFEGYRLPVDPRNPWNIFSLSPIAQGMNIVWKEEAGKPAFKVANIEYGARWSTTLSGIDFALAALHTWNKMPVIEVQGIAPTEIIVSPRYYRMGFVGGDLSVPVGQFVFRGEAAFNIDKHFTYKSHAKQEGFQTINWLVGADWYAPGEWMISGQFSMESIFRYRDFISQRQHSTLITLNVSKKFFGSTLQLSDFTYYDLTGKGWFSRFAADYALNDQIHLMAGYDWFSSKGSGIFDRYKDNSELWFKARYSF
>CP025930.1|AUR50026.1|2166349_2167141_-|hypothetical-protein
MKRLAKTTLMTAMVAMVSFSIYAQTGRDIAQRVKDRPDGDTRRSELTMKLINKRGAVRERKLISYSIDMGKDKKDKKTIMFFLYPGDVKGTGFLTWDYDQIGKDDDKWLYLPAMKKTRRISGASAKKDYFMGSDFTYDDMGSRNVDEDTHKLLGEETFDGHKCWKLESTSKDQRDVFSKKIAWIRQDCLIPVRVEYYDRMNRLHRLLELSDIAQIDGFWMAQKMNMSNVQTGHRTVLEIKKPEFNRPIDESKFTVTSLEKGSL
>CP025930.1|AUR49051.1|2167218_2169624_-|exporter-RND-superfamily
MKIERINRWFRHRGEWIIRKRWIVLGGFFFFLLLGFNGLRFLSIKTSWEDYFLEDDPMIIKTEEFKSVFGNDNYAAVLTDCDNTFTKENLELIRRLSNEMLDSISYAEKITSLTDIEFMIGNEEGMAIEQIVPEEIPSDSAGLAEIRRKAFLKPYIADRLVSKDGTLTWILLKLNPFPSDSVWNKGKGAVAPEMVVGRELENIIRKPEYAALHPKGAGMPYMTDRKIAWVNRELPMVMGIAILLAIIVLAISTRSFRGVVVPIVTALSSIVMAYGLTGYFRLGIDSGMMMIPMLLAFAVAVAYNIHIHSYFRRQMMIHGKRKQAAVETIEETGWPVLFSALTTFVALLSFLAIPVVPMHFIGIATSASVLFSFMIAITVMPTTLSFGKDHQPKASVRKEGKHRLDRWLEAFGAWVLDHEKSVWGAFILMTVVMIFGFLKMETAFDIERTMGRRIEYVSNILAVSESELGSLYSYDIMIDLGEEGKAKTPEALRALDSIARHAEAYSLTKRTTSILNILKDLNQTLHDGDQAYYSIPGDAEEVAQQLLLYENAGGSEAESWIDYEYRRLRLKVEMTSYNSGEAEWELQDITDYARKLFPEAEITPVGSLPQFTTMMQYVVRGQISSFLLSLLVIGLLMMVVFGSVRVGLIGLIPNIMPAIVVGGLMGILDYPLDMMTATIMPMILGLAVDDTIHFFNHGHLEFDRQRNYRGAVLKSFRIVGTPIVLTSLIVSANFAAYTISKGHSFVHMGILSVAGMFTALLADLCITPLLFRRFRIFGKEDFAVSVSKKTADQSLPNTVTD
>CP025930.1|AUR50288.1|2169664_2170264_-|transcriptional-regulator
MDARARILRAAREEFMVNGFRDASLRTIARESGVAVSNIYNYFEHKDSLFRAVLQPLLDEFGRIMEGHNSEHNMDVYMLMPEKFREETTKEFMQFARQFRAELKLLLLQSGGSSLEHFKDQVISRQIRSGENYLQLFKEKYPHANTEVSPFFIRLGAAWWVNVFIEIITNEIHTEEEINQGLSEYIAFGTAGWRALMQI
>CP025930.1|AUR49911.1|2171480_2172383_+|transposase-in-IS195
MKTNIVDVFCIIDDFSKLFDETIKKKTLEEEDKKRRNRKFKMSDSEVMTILILFHLSRYRDLKAFYLQYITHSCRSEFPHLVSYNRFVELQSRVGFKLIAFLNMCCLGQCTGISFIDSTPLKACHIKRAHGHRTMRGWAQKGKSTMGWFYGFKLHIVINDRGEIINYQITPGNCDDREPLKDGTFTKNLFGKLIADRGYISQNLFDRLFVDDIHMITKIKKNMKNSLMHLYDKVLLRKRALIETVNDMLKNVCQIEHTRHRSVNNFVTNLISGIIAYNILPKKPELNIEIIRNPNFPICA

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Crispr_ID: CP025930_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025930_10

2204849-2204942

Unclear

Consensus_repeat	Method
AGTTCTTCGCATAAAAGGAGCGAGTGAAAG	CRISPRCasFinder

1 spacers

cas2,cas1,cas4,cas7,cas8b6,cas3,cas5,cas6

The CRISPR arrays of CP025930_10

>merge|CP025930|10|2204849-2204942|CRISPRCasFinder
AGTTCTTCGCATAAAAGGAGCGAGTGAAAGCGACTGCTGGCGGTTGTTCTTCAGCAGCACGAATAGTTCTTCGCATAAAAGGAGCGAGTGAAAG

>CP025930|10|10|2204849-2204942|CRISPRCasFinder
AGTTCTTCGCATAAAAGGAGCGAGTGAAAG	CGACTGCTGGCGGTTGTTCTTCAGCAGCACGAAT
AGTTCTTCGCATAAAAGGAGCGAGTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP025930.1\|AUR50068.1\|2195551_2196316_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|234595
CP025930.1\|AUR50109.1\|2202144_2202882_+\|recombinational-DNA-repair-(RecF-pathway)	unknown	unknown	gnl\|CDD\|376822
CP025930.1\|AUR50309.1\|2221022_2221610_-\|hypothetical-protein	cas5	mkCas0069_cas5_CAS-I-B	unknown
CP025930.1\|AUR49192.1\|2202954_2204703_+\|phosphoglucomutase/phosphomannomutase-alpha/beta/alpha-domain-I	unknown	unknown	gnl\|CDD\|100092
CP025930.1\|AUR50196.1\|2221616_2222282_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
CP025930.1\|AUR49410.1\|2196328_2197666_-\|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl\|CDD\|273571
CP025930.1\|AUR50413.1\|2215873_2216383_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP025930.1\|AUR50233.1\|2192863_2193502_-\|WbqC	unknown	unknown	gnl\|CDD\|378083
CP025930.1\|AUR49808.1\|2191831_2192806_-\|geranyl-diphosphate	unknown	unknown	gnl\|CDD\|223220
CP025930.1\|AUR49101.1\|2218885_2221006_-\|CRISPR-associated-nuclease/helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP025930.1\|AUR50598.1\|2199316_2199676_+\|hypothetical-protein	unknown	unknown	unknown
CP025930.1\|AUR49031.1\|2224864_2227408_-\|inner-membrane-protein-unknown-function	unknown	unknown	gnl\|CDD\|370572
CP025930.1\|AUR50678.1\|2214597_2214861_-\|CRISPR-associated-endoribonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
CP025930.1\|AUR49794.1\|2197815_2198808_-\|inner-membrane-protein	unknown	unknown	gnl\|CDD\|225411
CP025930.1\|AUR49757.1\|2214860_2215877_-\|CRISPR-associated-protein-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
CP025930.1\|AUR49147.1\|2222929_2224861_-\|phosphoglycerol-transferase-Lipoteichoic-acid-synthase-1-arylsulfatase	unknown	unknown	gnl\|CDD\|293739
CP025930.1\|AUR50250.1\|2193522_2194149_-\|signal-peptidase-I-T	unknown	unknown	gnl\|CDD\|274044
CP025930.1\|AUR49704.1\|2216500_2217559_-\|CRISPR-associated-protein-Cas7	cas7	mkCas0088_cas7_CAS-I-B	gnl\|CDD\|273846
CP025930.1\|AUR49345.1\|2194138_2195536_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|182787
CP025930.1\|AUR49452.1\|2217579_2218875_-\|hypothetical-protein	cas8b6	mkCas0111_cas8b6_CAS-I-B	unknown

Protein	Function_ID	Function_description	E-value
CP025930.1\|AUR49101.1\|2218885_2221006_-\|CRISPR-associated-nuclease/helicase-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.46649e-60
CP025930.1\|AUR50109.1\|2202144_2202882_+\|recombinational-DNA-repair-(RecF-pathway)	gnl\|CDD\|376822	pfam02565, RecO_C, Recombination protein O C terminal. Recombination protein O (RecO) is involved in DNA repair and pfam00470 pathway recombination.	1.0899e-18
CP025930.1\|AUR49192.1\|2202954_2204703_+\|phosphoglucomutase/phosphomannomutase-alpha/beta/alpha-domain-I	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
CP025930.1\|AUR50196.1\|2221616_2222282_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	3.8915e-34
CP025930.1\|AUR49410.1\|2196328_2197666_-\|deoxyguanosinetriphosphate-triphosphohydrolase	gnl\|CDD\|273571	TIGR01353, dGTP_triPase, deoxyguanosinetriphosphate triphosphohydrolase, putative. dGTP triphosphohydrolase (dgt) releases inorganic triphosphate, an unusual activity reaction product, from GTP. Its activity has been called limited to the Enterobacteriaceae, although homologous sequences are detected elsewhere. This finding casts doubt on whether the activity is shared in other species. In several of these other species, the homologous gene is found in an apparent operon with dnaG, the DNA primase gene. The enzyme from E. coli was shown to bind coopertatively to single stranded DNA. The biological role of dgt is unknown. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions].	2.51502e-158
CP025930.1\|AUR50413.1\|2215873_2216383_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	3.33235e-68
CP025930.1\|AUR50233.1\|2192863_2193502_-\|WbqC	gnl\|CDD\|378083	pfam08889, WbqC, WbqC-like protein family. This family of proteins are functionally uncharacterized. However it is found in an O-antigen gene cluster in E. coli and other bacteria suggesting a role in O-antigen production. Feng et al. suggest that wbnG may code for a glycine transferase.	6.46629e-44
CP025930.1\|AUR49808.1\|2191831_2192806_-\|geranyl-diphosphate	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	2.96223e-75
CP025930.1\|AUR50068.1\|2195551_2196316_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|234595	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional.	1.9024e-53
CP025930.1\|AUR49031.1\|2224864_2227408_-\|inner-membrane-protein-unknown-function	gnl\|CDD\|370572	pfam09586, YfhO, Bacterial membrane protein YfhO. This protein is a conserved membrane protein. The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system. Some members of this family have been annotated as glycosyl transferases of the PMT family.	1.02575e-05
CP025930.1\|AUR50678.1\|2214597_2214861_-\|CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.78572e-30
CP025930.1\|AUR49794.1\|2197815_2198808_-\|inner-membrane-protein	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	2.14215e-54
CP025930.1\|AUR49757.1\|2214860_2215877_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	5.45203e-164
CP025930.1\|AUR49147.1\|2222929_2224861_-\|phosphoglycerol-transferase-Lipoteichoic-acid-synthase-1-arylsulfatase	gnl\|CDD\|293739	cd16015, LTA_synthase, Lipoteichoic acid synthase like. Lipoteichoic acid (LTA) is an important cell wall polymer found in Gram-positive bacteria. It may contain long chains of ribitol or glycerol phosphate. LTA synthase catalyzes the reaction to extend the polymer by the repeated addition of glycerolphosphate (GroP) subunits to the end of the growing chain.	2.51307e-65
CP025930.1\|AUR50250.1\|2193522_2194149_-\|signal-peptidase-I-T	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	6.50616e-12
CP025930.1\|AUR49704.1\|2216500_2217559_-\|CRISPR-associated-protein-Cas7	gnl\|CDD\|273846	TIGR01875, CRISPR-associated_protein_Cas7/Cst2/DevR, CRISPR-associated autoregulator DevR family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This model represents one such family, represented by MJ0381 of Methanococcus jannaschii. This family includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development. [Regulatory functions, DNA interactions, , ].	0.000103036
CP025930.1\|AUR49345.1\|2194138_2195536_-\|signal-peptidase-I	gnl\|CDD\|182787	PRK10861, PRK10861, signal peptidase I.	5.19884e-17

>CP025930.1|AUR49192.1|2202954_2204703_+|phosphoglucomutase/phosphomannomutase-alpha/beta/alpha-domain-I
MGTDKLLDQVRAKARIWLGTEYDDSTRKAVQAMLDNADTTELVDAFYRDLEFGTGGLRGIMGAGTNRMNRYTVGAATQGLSNYLLREFAGSSDISVVIGYDCRNNSRFFADTAAAVFSANGIGVYLFEELRPTPEISYAIRHLGCKSGVMITASHNPKEYNGYKAYWEDGAQIIAPHDRNIIAEVNRIRSVDEIKFEAKPELIRMIGENIDSAFIAEVKALSLSPESIARHRDIKIVYTPIHGTGSTVVPRALREYGFANIIHVPEQDVVSGDFPTVHSPNPEEPAALALAIAKAEETGADLVLASDPDADRIGVAVRNNEGRIVLINGNEICSLLIYYSIMRRKELGDLHPDDYIVKTIVTTELIRDIAKKEHVSMFDCYTGFKWIAAVIRENEGRRRYIGGGEESYGFLWEDFIRDKSSVSACALFCEMAAWALDRGMSVYRLIRSIYLEYGLYYEKGLSVVRKGKSGAEEIEAMMRNYREYAPVELGGSPVQEILDYASLEGKDFTRGEKFSLDMPTTSNVLQYKTEDGTKVSIRPSGTEPKIKFYIGVHFSVANEQELDRAYIVAEEKIATILHDLGV
>CP025930.1|AUR50109.1|2202144_2202882_+|recombinational-DNA-repair-(RecF-pathway)
MIIVSRAIVLHNTAYNDSYSIAHLFSRESGRVSYLIPRSSKRGKSGGSLRLLISPLNELEITAEHKQHRDLHFIKEAKLCSLHGRIQSDPVRNSIALFLAEFLYLILRLPEADTNLYDFVAFSIDKLEEMDGPMANFHLAFLFRLLVPLGLIPDLQFGGSVIPRWFDPADGRFVPNAPAHGRGIPPHQSTYLQLFRRITFDNMKAFRLSRAERRQVLDYLVDYYRFHLPPFPLLKTPDILSTLFD
>CP025930.1|AUR50598.1|2199316_2199676_+|hypothetical-protein
MKERLNQTVRYFLPILFAVYAGLVISFTHVHIINGVIIVHSHVQWGDNESNPQDNPHSDSELILYNQLSAIFTTYLDTPAIDLKEPVRVVGVVPFFCDNLIALISELTPSNHLRAPPVA
>CP025930.1|AUR49794.1|2197815_2198808_-|inner-membrane-protein
MNTDNPKSHISRIAYPAIIVFLILTLLGSLVERFHPFTSWLTPPVALLMGLAYALIFGSTHRRANKLGSKVLLQYSVVGLGFGMNLGESLASGRDGMMFTIISVFGTLLLGWFIGRKILQMNRNTSALIGAGTAICGGSAIAAVGPILKAEEHEMSVALGTVFLLNAVALFIFPSIGHWLALDQQQFGTWAAIAIHDTSSVVGAGSAYGEEALRVATTIKLTRALWIVPLTLVFSFVYKTKGAKRFPVPLFILFFIGAIILNTYLLEAYFPEVGRFVASLARKGLTLSLFFIGASLTKEVIASVGVRALLQGLFLWILISVGSLAFILLI
>CP025930.1|AUR49410.1|2196328_2197666_-|deoxyguanosinetriphosphate-triphosphohydrolase
MMQWERLLSDKRVGMEHYHQPKQSAQPWERTDFERDYDRMVFSSPFRRLQNKAQVFPLAGNIFVHNRLTHSLEVSCVGRSLGNNITRGLKARYGELPWESGAISAIVSAACLAHDMGNPPFGHSGERAISAYFREGKGRVWEDAVRKEGGRWEDFLHFEGNANAFRLLTHQFEGRRKGGFALTYSTVASIVKYPYSSEMAGKAGKFGFFATEEDTFLMIAEELGMLCRNEHPVKYARYPLVYLVEAADDICYQIMDIEDAYKLRILTYAETENLFLAFCPEEELRHIRGVLDHITDANEQIAYLRSRVISLLVESCTRVFLDHEDEILSGTFSGTLIGAMEPRLKEAYGACARMAYSKIYVARDVVDVELAGHQIFGALIDKMMEALTNPDHAYSRTLLSRVSTQYNIREESLYGKIQCTLDYISGMTDIYALDLYRKITGMNLR
>CP025930.1|AUR50068.1|2195551_2196316_-|4-hydroxy-tetrahydrodipicolinate-reductase
MALAAGYGSFFQEENPMKIVLIGYGKMGHVIERIACSRGHEVVLTIDAGEEDRFDSIAFRSADVAIEFTRPDAAYANCSRCMDKSVPVVCGTTGWTERLPELEERCRREGKTLFWASNFSIGVNLFFSLSRMFARLMSRHDQYRPHLTEIHHVHKLDAPSGTAITLAEGLIAESPSLDAWRLTETPEENELPITSIREGEVPGTHSISYTSEVDRLTICHEAFGREGFALGAVLAAEYAATHKGFLTMNDLISL
>CP025930.1|AUR49345.1|2194138_2195536_-|signal-peptidase-I
MTFHWKDLTPWRRIKGVAITILYLLFCIWAGPFWLIFLPLIVDYYFFHIIKWGWYKNIRNKTLRIICSWVADIIYCVVAVTFIFAFLFQNFAIPTSSLEKTLLIGDYLFVSKLSYGPRSPMTPLGVPLTHNTMPLTGGKSFSDKPLLPYKRLKGFGHVKEGDLVVFNFPAGDTVAVKQPNPDYYMWKKLVGREELWSNPDFYGEIVYRPVDRRDHYVKRCVGMPGQELSIRNNQIYIDGKEQRNPRNMQLNYLVRMSREMSVDLIDELGISYDDVRAVSSEELKASVGSNLIDSASNQPQIIYHLPLTQGMLDKLQAEPSFVKAVEEPTPIGPLYPLEYETGWTRDNYGPIVIPAKGMTVRLTPLNLALYSRCIRNFEGNKLVQKADGTVLINGRPADSYTFKMDYYFMMGDNRHNSADSRYWGFVPEDHIVGKPVFIWLSLNKDKSLFGGKIRFGRMMRTVNAD
>CP025930.1|AUR50250.1|2193522_2194149_-|signal-peptidase-I-T
MQIKSRYRNRIFFIGLPAVVLLSAVLIRLFLVTTYRVRSDAMLPTYRSGKLLWINRIASPDRGDVLVIKYRQDGEADSRFYLARLIGLPGDTLFLSKGGVVANRQKLKLPTSLLPREPYKIIVPRNDRTYRLTPLSLLACRRAIEEECSSNISFRRGKLYRDGAETAFFHFRRNYYWILADNPASGPDSRHLGIVPEESIVGVVMNAN
>CP025930.1|AUR50233.1|2192863_2193502_-|WbqC
MNLLSPSDPIVLSTAYLPPIQYFTKLLHREGVLLETAENFVKQSYRNRCHIAGPEGMQPLTIPVEKSPSPKAPIRDIRISEHGNWRHLHLNALISSYGSAPFFDHYMTEIEPFYRHKYTFLWDFNLDLLSVCLEWLDISPLIMFTSEYVEDCPNDFRYSIRPKQAPEDESFRPRVYYRTFAHKYGFLPNLSIVDLIFHEGPSAIQTLKECIR
>CP025930.1|AUR49808.1|2191831_2192806_-|geranyl-diphosphate
MTTLEAIQAPINGFVKDFHHSFEHALDSQSEWMTKAIKILNGSTGKHVRPLLTGLVAAVCAGKTNSTTLEAAVLLEMIHTATLIHDDVIDMASTRRGVPTLNAFFDNRVAVLMGDFVLSSALMRAIALNDIRIITIISQLGRELSEGEIRQFETADKVIIDEDIYMGVIRQKTAMLFSACAEVGAITVQAPVEIVEKVKRVGELLGYAFQIRDDIFDYYRNDVGKPTGNDIREGKITLPLLFALKNEQSALRDHCLTILDQKAFSEEDLQLLTSFAIEHGGIVYAERKMAEFIDKAKAELAVFPDSDALQSLLALADFIVQRAK
>CP025930.1|AUR50678.1|2214597_2214861_-|CRISPR-associated-endoribonuclease-Cas2
MYIILVYDIGEKRVGKMLKLCRKYLNWIQNSVFEGEISEVKLLELKSRAARIMEKEEDSLIIFSSRQERWLEKEIIGKERSATDIFL
>CP025930.1|AUR49757.1|2214860_2215877_-|CRISPR-associated-protein-Cas1
MKKTYYLFNPGELSRKDNTIRFVPIQEGENGQEQAGQARYIPVEGISDFYVFGSLRANSSLYNFLGSNDIAVHFFDYYENYTGSFMPRDFLLSGKMLLAQASAYKNKKKRLFLARKFIEGAASNMQKNLAYYNNRGKDMQPMMELIDKYSLRLEETTTIEALMGIEGNIRQAYYDAFNLIIDPFEMGARSKQPPQNEVNALISFGNMMCYTLCLKAIHQSQLNPTISFLHTPGERRYSLCLDISEVFKPILVDRTIFKVMNKRIIQAKHFDKQLNKCILNPSGKKLFVQAFEERLSETIRHRKLNRSISFKHLVKLECYKIAKDILGIEEYQPFKMYW
>CP025930.1|AUR50413.1|2215873_2216383_-|CRISPR-associated-protein-Cas4
MIITGTHFNYHQVCRRKLWLFSAGITMEHTSDLVYEGKLIHETTYQQRPERYQELELDGIKIDFYDAKNRVVHEVKKSNKISPAHRLQLLYYLYVLERNGVLGATGILEYPTLRKKEEVILSDIDRERIREIEQEILQIISHEDCPPVIDSGICKNCSYYEFCFSGEEQ
>CP025930.1|AUR49704.1|2216500_2217559_-|CRISPR-associated-protein-Cas7
MKPYIYLRGLKRAEHTVFCVQDGQKTYYDAQYDRSLAYSSGQQVKRSVLEAFTDCLNVQMAPITFNYEISSKKELTQKEPWSPCDPEYADQLIGGWMRAGDGITKKRRSPLSVSAMRPLHPLLCGVSKENLTFDRSDRPDNHPVNVRLAGQSSLLSEEEIESFLRDTGSTLTRRHWIPDNKRASGLFVYDIAIDLRTLFSVSLNQHDPEIDPETIKKLRANGWVESETVFGKCLVLPKAGRDKIIPALAHALIHWRITSNQARTFSLMETLAIAISDKANAQAGAIRAKLVDDGSEKPKAKPIVDEKAGAELFITLPCAAHVVVENESADALDAAEKRLIEMLQAFDYENQL
>CP025930.1|AUR49452.1|2217579_2218875_-|hypothetical-protein
MVTSVIGKIFLKAYNERNNTDYAPKGFFLDIYYPLFFGQEKYLMTAGNSPFENPKISWKDMILGKKHFETAERRAERLEKFVEKIDSGIADASIAIGYPSIDPLSTTSGQVSIPRNEIDASESYLSWIGAGLGVGVQGGMTILFNKPELLLDIFEGWKEYRRHLDKTPSMRGNQINTWNGQWIKKLYDSKDCSLDFSDVYSTKDGIMEVSILPWAQLLVSISKRFEDPKMMGYIYNIGQTNTTIGFIPFVLWPIRKANELFDRYFGADKYKDAVKLFGTAIGFAKACSEGSVGLKAMEPKGLSDYMRKGKIPVCKAGNEEQTIQYNTYQIWLLAMLNNEELWGKSKEFAQTLQLFGSGGKAGRTGRTNAIKLLLEATNKKVFIERLTAIVEESEVAKELEEMASIVHLMPSDNVPYFLTLIRFHYAVINKQ
>CP025930.1|AUR49101.1|2218885_2221006_-|CRISPR-associated-nuclease/helicase-Cas3
MSRYEHIFAKSDGTPLLQHLQDVAKAAEVMAQHWGLSTDMARKGAHLHDIGKASPIFQSRLKAEDNLGGDVFRHEIASIFFISLLPDEVDRRAIIEMIAAHHKSICNDSRELGLLDLDENESRCFKLHSKGFEQWSQEALGILHELGWETHPITMDEARSNYQEAVDYCSSLGRNCSQWKGLLMAADHFASSLDGQTEDTLRKLFVTPDLSYYRNRRSELYPLSLLSADDERQHTLVTAPTGAGKTDFLLRRCRGRVFYTLPFQASINAMYDRLKADLRDTDAQIYPLHAASILKLNGGYERILSRHVGASIKVLTPHQIAALAFGLKGYEVTALDIRGCDVILDEIHTYRKETQAMVLKIVEILVALGCRIHIGTATMPTDLYTGLLRLLGGETAVYEVKLPKEVLKGFDRHTIHKAGSMEDVEPVIQKAIEQSQKILMVCNQVKRAQQLYQEVVGKYPAIPTLLIHSRFKRGHRAQLELELKERYNQCQGPCIVVSTQVVEVSLDISFDMMLTECAPIDALIQRFGRINRKRSLETIGQTKPIYVIAPPENEKEALPYELEILQRSYSSLPHCEVLHEADVQQLLDAVYPEVMALDINMHTIFQDGEWVMKELKHNSKSALFKILDINSACCIMESDREEYENGNYINRTPLEIPVPQSIRFKQLVATNCGAHPFVIPDRAYDSKLGLMEEFADSRYYKSFEIF
>CP025930.1|AUR50309.1|2221022_2221610_-|hypothetical-protein
MEDKIFFVVHYTGPFGYIKPWSAVRDGETYSQQFLTPSIIEGMEKKLFPEMLIKKGIHKIARHKLSCMSMSVQQEKTQTQAWEGKGKGKGRTYTRPQSILKRGVMLHPSLYLAFTSEEDAVIAARQHLCLCRNEDVVLPDTEILKMDEETFNALPGFELRFGKDYPDAFMVGFNRFDENTPMYGRIEIGGEAILQ
>CP025930.1|AUR50196.1|2221616_2222282_-|CRISPR-associated-endoribonuclease-Cas6
MRIELSIKADDSLVSFSHQHLLVGTLQKWLGENDMHGKSISYSFSRLNGGKFVSELNSILFTDWANMFVSAHDPELIRRMLAGIRQDPEMFKSLCVREVTVIEDPDMTDREIFFPAGPILLKRWREDNGFDHIVYTDEAANALLTENLRKKLQAVGIDDPTATASFVPDQGKAKVMLIDYRGVKNKASWCPIRIIGNAETKLFAWNAGIGNSTGIGFGAIK
>CP025930.1|AUR49147.1|2222929_2224861_-|phosphoglycerol-transferase-Lipoteichoic-acid-synthase-1-arylsulfatase
MKTLFERGELLFRKRSGFCYVIGVFVLFLLYFLFQKVIFLLVYSGQLAGIGTSSGDIAAIFLYGLRHDAAVAAYLTVLPLLFAGINAIAGWGEKKIGRIQRQILKHYYTLISFFVGLIYTADLMLFGYWGFRLDATPLFYLRQPQEAMASATAPQLLIGLLITVVFVCIPAFVLHRFHRRYFPTKVVAHPHIADIWKPVVGGAFLFLLIRGGVGVATLNVGSVFHSPKQLHNQVAVNPVFSFLYTCMHSEEDYSNYQFLSEEDCIKAFEQLRLYGCSDGSEVRESASDSTERILSTDRPNIVLILLESFSANAVGCLGGTPGHTPCIDSLAQNGILFSQAFASSFRTDRGTVATLSGYPSQPNSSIIKYPNKVRNLPGIAASLRTVGYSTHHLYGGDADFTNVRSYLYATGYDEVTDVSSFPIKTRLSKWGTPDHISFPRLLDDCRRLEKEKKPYFYSFLTLSSHEPFDVPSQHHPDPYLNSVFYTDSCFGDYIRGMQQSPQWKNTLIITVSDHGYPYPADQAMPDQPGRYGIVMLWTGGAILRPIRFEEVVSQSDLPATLLAQLGLAHDEFVFSKDVFRRNSPHFAYFSFPGLVGLATSEGTTIYDFAGDKIVYGHEAPLADQRAIAAKVMLQSVMKDMLSR
>CP025930.1|AUR49031.1|2224864_2227408_-|inner-membrane-protein-unknown-function
MKENEKPTAAAGTVTTTDKTKPDWRKILPYAAVVLLFIALALAYFYPASFDGRVLFQGDVAGASGTAQDVRDWEAQTGEHSYWTNSLFGGMPMYQISPSYPSTHTLQTIQDVLTLRKPFYLLGTYAWMLFAMMGGFFLFLRSLRIRILPAVIGSIAWAFSSYFLILIMAGHIWKLTAMCFIPPTLAGMIWIYNGRWLAGGSVMAFFTALQVLANHVQMSYYFLFVMFFMVLAFLAEAIQTKRIRHFFLSSAVVVIAGLVGIAVNSTNLFHTYQYGKETMRGGSELTLKQSGAPTDQVTHENKSGLDKAYITQWSYGIGETWSLLIPDIKGGSSGYLGYDEKVMETVNPSYAQAIARMNRYWGDQPFTAGPVYVGAFVLFLFVLGCFIVKGPVKWALLAATILSILLSWGHNMMWLTSFFIDHFPLYDKFRTVSSILVIAEFTIPALAVMALAKIIKEGKPLLKRERTAWVAATLLTLGASLLFALVPSLLGLLSGQEEAMFREAAGHPEAAAIKTTLVDVRSGILASDAWRSFGILAVCGILLWLFFQKRLKATALLVSLAVITLVDLWTVDKRYLNDEHFIDPELVSQRAAPLTEADKQILADKSLGYRVLNLTVDTYNDATTSRWHRSIGGYHAAKLQRYQDLIEHQLSKGNREVVNMLNTKYIIVPGENNRPTPMLNPDAYGPAWPAGSIRWVGNANEEMMALDSNRLTRDIAVVDERFSSESLKRLPALTDSTASISLKEYAPNRQVYEAVSTQPMLGIFSEIYYPHGWTATIDNQAVPIIRANYILRALEVPAGRHKIEFRFDPKSLHITEAIAKTALALLQLGIVWAIARPFFLRGKRPTA

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Crispr_ID: CP025930_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025930_11

2206472-2214351

Unclear

Consensus_repeat	Method
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CRISPRCasFinder
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CRT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	PILER-CR

119 spacers

cas2,cas1,cas4,cas7,cas8b6,cas3,cas5,cas6

The CRISPR arrays of CP025930_11

>merge|CP025930|11|2206472-2214351|CRISPRCasFinder,CRT,PILER-CR
GTTTTAATTCCTGTATGGTGCAATTGAAATAAACGAAATGAAAAAGACAACAAACAGAAGACCCTCGTTTTAATTCCTGTATGGTGCAATTGAAATGTGCCAGCTGCAGGGGGATGACATAGCCATTGACGAGTTTTAATTCCTGTATGGTGCAATTGAAATGTGCCAGCTGCAGGGGGATGACATAGCCATTGACGAGTTTTAATTCCTGTATGGTGCAATTGAAATTCCGCGCCGCGAGGTGGAGACCCTGCCGGAGGCGAAGTTTTAATTCCTGTATGGTGCAATTGAAATCCTGAGAAAGAGGGGAGGGAGGAGCGATAGACGAAGTGTTTTAATTCCTGTATGGTGCAATTGAAATCGAGAATCTATTGAGTAGCGAAGTCGTCACAAAGATGTTTTAATTCCTGTATGGTGCAATTGAAATAGCCATAGCTCTTCAATTTCAATTTCTTCTTTTAATGTTTTAATTCCTGTATGGTGCAATTGAAATCGAAAATAACAAAAATAGATATATTTATAAAAAAGAGTTTTAATTCCTGTATGGTGCAATTGAAATACTCTTATCATCTACTATCTCAAAAGCTCTTTTTGTTTTAATTCCTGTATGGTGCAATTGAAATTCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTAGTTTTAATTCCTGTATGGTGCAATTGAAATGAAACATTCGAGCCGTATTCAATTACGCCATCAATGGTTTTAATTCCTGTATGGTGCAATTGAAATCACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTAGTTTTAATTCCTGTATGGTGCAATTGAAATTCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTAGTTTTAATTCCTGTATGGTGCAATTGAAATGAAACATTCGAGCCGTATTCAATTACGCCATCAATGGTTTTAATTCCTGTATGGTGCAATTGAAATCACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTAGTTTTAATTCCTGTATGGTGCAATTGAAATTCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTAGTTTTAATTCCTGTATGGTGCAATTGAAATGAAACATTCGAGCCGTATTCAATTACGCCATCAATGGTTTTAATTCCTGTATGGTGCAATTGAAATCACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTAGTTTTAATTCCTGTATGGTGCAATTGAAATATTTCTTCATCTCGCGCTTGCTCAAAAGCGCGTTCAGTTTTAATTCCTGTATGGTGCAATTGAAATTGCATCAAGTCACGAACTTTCTGCGAGATGGAAAGTTTTAATTCCTGTATGGTGCAATTGAAATCCGTCTCGAAAAAATATCGGGACGTTTTTGTTTTCTGTTTTAATTCCTGTATGGTGCAATTGAAATCTCCTTCACTTTGTCGACAATGTGCACTGTATTTGGTTTTAATTCCTGTATGGTGCAATTGAAATAGGCGGAGTATCTCTTTGCCACCCAGTCCGCGCGCAGTTTTAATTCCTGTATGGTGCAATTGAAATCGTAACCGCCTCGGTAGACCGCTCCGCACGGTCGTTGTTTTAATTCCTGTATGGTGCAATTGAAATGTGCATTCCGGACAGCTTTCGCTTAAAAAGTTAGCGGGTTTTAATTCCTGTATGGTGCAATTGAAATAAGAACGAACGCCTGCGCGATAAGCACCGCGAGCGTAGTTTTAATTCCTGTATGGTGCAATTGAAATATTTACCTGCAGACTTGTGCCCACCCACTTGATAGAGTTTTAATTCCTGTATGGTGCAATTGAAATTGGTCACGGAGCGATACCATGAGTGTTTAGTAGATGGTTTTAATTCCTGTATGGTGCAATTGAAATCGGAGGAGATCAGCTATGCGGATGATACCACCCGTGGTTTTAATTCCTGTATGGTGCAATTGAAATTCAGAAAACTCGCGTCCATCTGATAGATGTACACGAGTTTTAATTCCTGTATGGTGCAATTGAAATTAAACGATCGAGGCGCGGAGACCCTCCTTGCCAGTAGTTTTAATTCCTGTATGGTGCAATTGAAATCCGTTCAGGAAAAAGTAACCGAGCTGAAGACCATGCTGTTTTAATTCCTGTATGGTGCAATTGAAATAGGTGCTATCGCAGGACTGCAGGACATCCTCAATCGTTTTAATTCCTGTATGGTGCAATTGAAATAGCCGCTCGACTTGACGCCATGCAAAAACAGATAGAGTTTTAATTCCTGTATGGTGCAATTGAAATTCTGCGAGTTGTGAGAGGCAATAAACTGCTGGGAGCGTTTTAATTCCTGTATGGTGCAATTGAAATATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTAGTTTTAATTCCTGTATGGTGCAATTGAAATTCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTGGTTTTAATTCCTGTATGGTGCAATTGAAATGGGAAGCTGCTTTGCTCGCTGAGATAGCAGCACTTCAGTTTTAATTCCTGTATGGTGCAATTGAAATTTTATTGACGCCACCCCGCCGACGAAAAAAAATCATGTTTTAATTCCTGTATGGTGCAATTGAAATTTTCGGTCTTTACGTTTGTCGCCACGGATACATGCTGTTTTAATTCCTGTATGGTGCAATTGAAATATTGTAAATAAATTACATGGCTATTGAAAAACAAATTGTTTTAATTCCTGTATGGTGCAATTGAAATGATTGTACGACTTTGCTATAAAGTCTGAGTTATTAAGTTTTAATTCCTGTATGGTGCAATTGAAATTATCAACAATCACCGTCATATGTGTAATATACTTGAGTTTTAATTCCTGTATGGTGCAATTGAAATGGGCAGGCGTATTGCCCCACTTCTCCCCGAATGCATGTTTTAATTCCTGTATGGTGCAATTGAAATTGAGGAATCATATCAGTGTTTATTTTTTCATCGATTGTTTTAATTCCTGTATGGTGCAATTGAAATTGGAAGTGGGTAGAAGAAAGCCCCAACGTGTTTAAGGTTTTAATTCCTGTATGGTGCAATTGAAATCATGACAAAGAGACGGTTATCGGTAGAGGACAGGCAGTTTTAATTCCTGTATGGTGCAATTGAAATCGCGTGGAAGGGGCATGTACACTTGTAGTTCGCCCGTTTTAATTCCTGTATGGTGCAATTGAAATTGACAGGCCCTGCAGCGTGTGAGAGCGGAAATGCGTTTTAATTCCTGTATGGTGCAATTGAAATATTTTCAATCATGATATTTTATTTTTCCTGCAAACGCGTTTTAATTCCTGTATGGTGCAATTGAAATTCGCATGTGGGAGCGCGGCGGTCTCTGCTTTACGAAGTTTTAATTCCTGTATGGTGCAATTGAAATTCAGCGTGATGAGCGCTTGAGGCTCCTCCATCGAGTGTTTTAATTCCTGTATGGTGCAATTGAAATAAGGATGATTTGGAAAATTTAGTAAGATAGTTGATAGTTTTAATTCCTGTATGGTGCAATTGAAATTTCTTGGAGAAAGCGAAGACCATGAACCTAAGCGTCGGTTTTAATTCCTGTATGGTGCAATTGAAATGGAAATATAGTTATTGTATCTACTAAAAGACATAGTGTTTTAATTCCTGTATGGTGCAATTGAAATACCCCATCTTGCAGAGTATATGCGAGCAAAATTTGTTTTAATTCCTGTATGGTGCAATTGAAATTAGTTAGCACAGTTGCTACTATCGTAGTAGCTGTGTTTTAATTCCTGTATGGTGCAATTGAAATAGATAAACTTTCTTCTCGAATTAAGAAAATCGAGAGTTTTAATTCCTGTATGGTGCAATTGAAATCCGCGGCCATCGAGGCCACCGCCTCCGTCCTCCGCGGTTTTAATTCCTGTATGGTGCAATTGAAATTATGAAAACAGAAAAGAACTTCTCAGCCCTGAGTTTGGTTTTAATTCCTGTATGGTGCAATTGAAATCAAACTCAATGATTATCTGTCAAGAAGCAAGAAACGAGTTTTAATTCCTGTATGGTGCAATTGAAATAGTAAAAATTACCCTAGATGCCGAAACGGACGGCCTTGTTTTAATTCCTGTATGGTGCAATTGAAATCAGAATTTGCACGAACAGTATGATGTTCGTGTTCTTGTTTTAATTCCTGTATGGTGCAATTGAAATAAGCGCGAGACAGGCCGAGCCGGCACAGCTTAGTGCGTTTTAATTCCTGTATGGTGCAATTGAAATAAAACGGCGATAAAATAGCGTTCGAGATTTTCCGCAGTTTTAATTCCTGTATGGTGCAATTGAAATTAGTTGTAGCGATTGTCTCAGTTGCATTACTCCTTACGTTTTAATTCCTGTATGGTGCAATTGAAATAAATAACGAGAAAAAGAATGCTTAAATTGTTCTTCGTGTTTTAATTCCTGTATGGTGCAATTGAAATAGAAGAGGGTAAACTATTTGCTAATCTTGAATGCTTGTTTTAATTCCTGTATGGTGCAATTGAAATTCTCAATATCTTTCATAGCTACTAAAAATTTACGAAGTTTTAATTCCTGTATGGTGCAATTGAAATATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTAGTTTTAATTCCTGTATGGTGCAATTGAAATTCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTGGTTTTAATTCCTGTATGGTGCAATTGAAATTGCCCCCTCACCCATCTAACCTCGAGCCGTTGAGCCGTTTTAATTCCTGTATGGTGCAATTGAAATGATTACATAATGATAGACGACAGAGATTGTGCAGAAGTTTTAATTCCTGTATGGTGCAATTGAAATGTACTGATAATTACGCTGCAAGGTCAGACGGTGATGTTTTAATTCCTGTATGGTGCAATTGAAATTTGCCAGGGCTTGCTGATGCGCGCGCTCCAGCTGCTGTTTTAATTCCTGTATGGTGCAATTGAAATACAGAACCAGCTCCGTCAAATCTCCCGCTTTTTGTCGTTTTAATTCCTGTATGGTGCAATTGAAATTGCCCCCTCACCCATCTAATCTCGAGCCGCTGAGCCGTTTTAATTCCTGTATGGTGCAATTGAAATTATTCATTCGCTCAAGCGAGGGCATCCTGCTGCAGCGTTTTAATTCCTGTATGGTGCAATTGAAATGCTCGCGGAGGGAGAGGGTGCCGGTATCCTGCCTCCGTTTTAATTCCTGTATGGTGCAATTGAAATAGAGTCTGTATGTGAAAGTGTAGTTCGAAACATTATGTTTTAATTCCTGTATGGTGCAATTGAAATAGAATACTTTGAAGTTGTATTCAATTACTTTGAAGTTTTAATTCCTGTATGGTGCAATTGAAATCCGTTGTGACAGAGCTGCGCCGTCGTGGCTATGATGGTTTTAATTCCTGTATGGTGCAATTGAAATTGAAAGCCCGAAGATAATCTACACGCAAGATTGTTAGTTTTAATTCCTGTATGGTGCAATTGAAATCGTCATCAGGTGGATATTCTTACTGCTATCCACGAGTTTTAATTCCTGTATGGTGCAATTGAAATTCGTCTGCGACGTATCGCAGCTCTGCCAGCTCCGCGGTTTTAATTCCTGTATGGTGCAATTGAAATGCATCTTCGCAGGAAAGAAGAAGGCTCCGTCCTCGAGTTTTAATTCCTGTATGGTGCAATTGAAATAACAGTCAAGGGGGAGCCGACCTCTCCGGCGGATTTGTTTTAATTCCTGTATGGTGCAATTGAAATGCAGTGCGGCCGACAAGGCTAACCTCGCTCAGCTGAGTTTTAATTTCTGTATGGTGCAATTGAAATAATCCATGTTCATGAGGAGAGGATACGAGTTCTATTGTTTTAATTCCTGTATGGTGCAATTGAAATCCTTTTGCTATTGCAGCAAACATATACAATAATAAGTTTTAATTCCTGTATGGTGCAATTGAAATACTTCATGGATTTAGCGAGATACTCATTATAATTAAGTTTTAATTCCTGTATGGTGCAATTGAAATTCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAAGTTTTAATTCCTGTATGGTGCAATTGAAATATCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAAGTTTTAATTCCTGTATGGTGCAATTGAAATGCTCAAGCGTCCAAGAAAGTTCAAGAAATTGTACTAGTTTTAATTCCTGTATGGTGCAATTGAAATTACTATGGTGTCTGCATTTGAGATACGCAAATAGCAAGTTTTAATTCCTGTATGGTGCAATTGAAATCCTCAATATCTTTCATTGCGACGAGAAATTTGCGAAGTTTTAATTCCTGTATGGTGCAATTGAAATAATCTATGATGATATAGAAGAAGACGACTTGTTGTTGTTTTAATTCCTGTATGGTGCAATTGAAATATTAATGATTTTCTGAAATAAAGAAGCAGTTGCATAGTTTTAATTCCTGTATGGTGCAATTGAAATCTCAATATCTTTCATTGCGACGAGGAACTTGCGAAGTTTTAATTCCTGTATGGTGCAATTGAAATCCCCGTGGTAACTCATACCACCGACTATTCCACCGTGTTTTAATTCCTGTATGGTGCAATTGAAATTTTGAGTAATCATCGAATAATTATCGATTAATCATTGTTTTAATTCCTGTATGGTGCAATTGAAATTTATATGCATCATATTCTTAAAGTATTTTATTTGAAGTTTTAATTCCTGTATGGTGCAATTGAAATGACGAATACGGCGTTCATCATCGATAGTCGCGATGCGTTTTAATTCCTGTATGGTGCAATTGAAATCGGGCGGCCAACCGGTCACAACAAGAATAGACCGATGTTTTAATTCCTGTATGGTGCAATTGAAATTTCCTTCCAGTCGCAGCTTAAGATACTGCGACTACGTTTTAATTCCTGTATGGTGCAATTGAAATAATTTTCATCAGAGCATAAAAAAGGGCAAACTTTTTGTTTTAATTCCTGTATGGTGCAATTGAAATGATACGAGCACCAAGGCTGCGATACCGATTGCGTAGTTTTAATTCCTGTATGGTGCAATTGAAATCCTCGAGCAGATCTTCCTGCTCTTTGATGAGTGAGGGTTTTAATTCCTGTATGGTGCAATTGAAATGCAGGTTGATTATAATGTTGAAGATGCTTTAAGGGGTTTTAATTCCTGTATGGTGCAATTGAAATCTCGTATCGACTTTCAAGCAGGCTGGAGTGCAGCCTGTTTTAATTCCTGTATGGTGCAATTGAAATAATATGAGATCGGAAACAATTATAGTTGCGTCGATATGTTTTAATTCCTGTATGGTGCAATTGAAATTCACAATAACCGACAAAATGTCTCGCGTAACGTACAAGTTTTAATTCCTGTATGGTGCAATTGAAATGTCGCCTGTTTTCTTGAACTCCTCACTGATTCGTAGTTTTAATTCCTGTATGGTGCAATTGAAATGATGGTGTCGACATCATACGACAATAGATCGTCGAGTTTTAATTCCTGTATGGTGCAATTGAAATGATGGTGTCGACATCATACGACAATAGATCGTCGAGTTTTAATTCCTGTATGGTGCAATTGAAATAATATTTTTTCAAAAATTGTAAAACTTATTAAGTCAGTTTTAATTCCTGTATGGTGCAATTGAAATAAGTTGCTGATTGTCTTAGAATGAAAGGTTATGCTCGTTTTAATTCCTGTATGGTGCAATTGAAATATAATATTACATAATGGCACACTGATGGTAAACTTGTTTTAATTCCTGTATGGTGCAATTGAAATCATGATGTACAAATATATCATGATCGTATACTACGTTTTAATTCCTGTATGGTGCAATTGAAAT

>CP025930|11|11|2206472-2214351|CRISPRCasFinder
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAACGAAATGAAAAAGACAACAAACAGAAGACCCTC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTGCCAGCTGCAGGGGGATGACATAGCCATTGACGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTGCCAGCTGCAGGGGGATGACATAGCCATTGACGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCCGCGCCGCGAGGTGGAGACCCTGCCGGAGGCGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTGAGAAAGAGGGGAGGGAGGAGCGATAGACGAAGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGAGAATCTATTGAGTAGCGAAGTCGTCACAAAGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGCCATAGCTCTTCAATTTCAATTTCTTCTTTTAAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGAAAATAACAAAAATAGATATATTTATAAAAAAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACTCTTATCATCTACTATCTCAAAAGCTCTTTTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GAAACATTCGAGCCGTATTCAATTACGCCATCAATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GAAACATTCGAGCCGTATTCAATTACGCCATCAATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GAAACATTCGAGCCGTATTCAATTACGCCATCAATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTTCTTCATCTCGCGCTTGCTCAAAAGCGCGTTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGCATCAAGTCACGAACTTTCTGCGAGATGGAAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGTCTCGAAAAAATATCGGGACGTTTTTGTTTTCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTCCTTCACTTTGTCGACAATGTGCACTGTATTTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGGCGGAGTATCTCTTTGCCACCCAGTCCGCGCGCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTAACCGCCTCGGTAGACCGCTCCGCACGGTCGTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTGCATTCCGGACAGCTTTCGCTTAAAAAGTTAGCGG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAGAACGAACGCCTGCGCGATAAGCACCGCGAGCGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTTACCTGCAGACTTGTGCCCACCCACTTGATAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGGTCACGGAGCGATACCATGAGTGTTTAGTAGATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGGAGGAGATCAGCTATGCGGATGATACCACCCGTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCAGAAAACTCGCGTCCATCTGATAGATGTACACGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAAACGATCGAGGCGCGGAGACCCTCCTTGCCAGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGTTCAGGAAAAAGTAACCGAGCTGAAGACCATGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGGTGCTATCGCAGGACTGCAGGACATCCTCAATC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGCCGCTCGACTTGACGCCATGCAAAAACAGATAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTGCGAGTTGTGAGAGGCAATAAACTGCTGGGAGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GGGAAGCTGCTTTGCTCGCTGAGATAGCAGCACTTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTTATTGACGCCACCCCGCCGACGAAAAAAAATCAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTTCGGTCTTTACGTTTGTCGCCACGGATACATGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTGTAAATAAATTACATGGCTATTGAAAAACAAATT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATTGTACGACTTTGCTATAAAGTCTGAGTTATTAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TATCAACAATCACCGTCATATGTGTAATATACTTGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GGGCAGGCGTATTGCCCCACTTCTCCCCGAATGCAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGAGGAATCATATCAGTGTTTATTTTTTCATCGATT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGGAAGTGGGTAGAAGAAAGCCCCAACGTGTTTAAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CATGACAAAGAGACGGTTATCGGTAGAGGACAGGCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGCGTGGAAGGGGCATGTACACTTGTAGTTCGCCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGACAGGCCCTGCAGCGTGTGAGAGCGGAAATGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTTTCAATCATGATATTTTATTTTTCCTGCAAACGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGCATGTGGGAGCGCGGCGGTCTCTGCTTTACGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCAGCGTGATGAGCGCTTGAGGCTCCTCCATCGAGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAGGATGATTTGGAAAATTTAGTAAGATAGTTGATA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCTTGGAGAAAGCGAAGACCATGAACCTAAGCGTCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GGAAATATAGTTATTGTATCTACTAAAAGACATAGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACCCCATCTTGCAGAGTATATGCGAGCAAAATTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAGTTAGCACAGTTGCTACTATCGTAGTAGCTGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGATAAACTTTCTTCTCGAATTAAGAAAATCGAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGCGGCCATCGAGGCCACCGCCTCCGTCCTCCGCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TATGAAAACAGAAAAGAACTTCTCAGCCCTGAGTTTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CAAACTCAATGATTATCTGTCAAGAAGCAAGAAACGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGTAAAAATTACCCTAGATGCCGAAACGGACGGCCTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CAGAATTTGCACGAACAGTATGATGTTCGTGTTCTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAGCGCGAGACAGGCCGAGCCGGCACAGCTTAGTGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAAACGGCGATAAAATAGCGTTCGAGATTTTCCGCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAGTTGTAGCGATTGTCTCAGTTGCATTACTCCTTAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAATAACGAGAAAAAGAATGCTTAAATTGTTCTTCGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGAAGAGGGTAAACTATTTGCTAATCTTGAATGCTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTCAATATCTTTCATAGCTACTAAAAATTTACGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGCCCCCTCACCCATCTAACCTCGAGCCGTTGAGCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATTACATAATGATAGACGACAGAGATTGTGCAGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTACTGATAATTACGCTGCAAGGTCAGACGGTGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTGCCAGGGCTTGCTGATGCGCGCGCTCCAGCTGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACAGAACCAGCTCCGTCAAATCTCCCGCTTTTTGTC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGCCCCCTCACCCATCTAATCTCGAGCCGCTGAGCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TATTCATTCGCTCAAGCGAGGGCATCCTGCTGCAGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCTCGCGGAGGGAGAGGGTGCCGGTATCCTGCCTCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGAGTCTGTATGTGAAAGTGTAGTTCGAAACATTAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGAATACTTTGAAGTTGTATTCAATTACTTTGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGTTGTGACAGAGCTGCGCCGTCGTGGCTATGATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGAAAGCCCGAAGATAATCTACACGCAAGATTGTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTCATCAGGTGGATATTCTTACTGCTATCCACGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGTCTGCGACGTATCGCAGCTCTGCCAGCTCCGCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCATCTTCGCAGGAAAGAAGAAGGCTCCGTCCTCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AACAGTCAAGGGGGAGCCGACCTCTCCGGCGGATTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCAGTGCGGCCGACAAGGCTAACCTCGCTCAGCTGA
GTTTTAATTTCTGTATGGTGCAATTGAAAT	AATCCATGTTCATGAGGAGAGGATACGAGTTCTATT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTTTTGCTATTGCAGCAAACATATACAATAATAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACTTCATGGATTTAGCGAGATACTCATTATAATTAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCTCAAGCGTCCAAGAAAGTTCAAGAAATTGTACTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TACTATGGTGTCTGCATTTGAGATACGCAAATAGCAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTCAATATCTTTCATTGCGACGAGAAATTTGCGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATCTATGATGATATAGAAGAAGACGACTTGTTGTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTAATGATTTTCTGAAATAAAGAAGCAGTTGCATA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTCAATATCTTTCATTGCGACGAGGAACTTGCGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCCCGTGGTAACTCATACCACCGACTATTCCACCGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTTGAGTAATCATCGAATAATTATCGATTAATCATT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTATATGCATCATATTCTTAAAGTATTTTATTTGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GACGAATACGGCGTTCATCATCGATAGTCGCGATGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGGGCGGCCAACCGGTCACAACAAGAATAGACCGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCCTTCCAGTCGCAGCTTAAGATACTGCGACTAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATTTTCATCAGAGCATAAAAAAGGGCAAACTTTTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATACGAGCACCAAGGCTGCGATACCGATTGCGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTCGAGCAGATCTTCCTGCTCTTTGATGAGTGAGG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCAGGTTGATTATAATGTTGAAGATGCTTTAAGGG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTCGTATCGACTTTCAAGCAGGCTGGAGTGCAGCCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATATGAGATCGGAAACAATTATAGTTGCGTCGATAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCACAATAACCGACAAAATGTCTCGCGTAACGTACAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTCGCCTGTTTTCTTGAACTCCTCACTGATTCGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATGGTGTCGACATCATACGACAATAGATCGTCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATGGTGTCGACATCATACGACAATAGATCGTCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATATTTTTTCAAAAATTGTAAAACTTATTAAGTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAGTTGCTGATTGTCTTAGAATGAAAGGTTATGCTC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATAATATTACATAATGGCACACTGATGGTAAACTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CATGATGTACAAATATATCATGATCGTATACTAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT

>CP025930|11|3|2206472-2214351|CRT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAACGAAATGAAAAAGACAACAAACAGAAGACCCTC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTGCCAGCTGCAGGGGGATGACATAGCCATTGACGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTGCCAGCTGCAGGGGGATGACATAGCCATTGACGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCCGCGCCGCGAGGTGGAGACCCTGCCGGAGGCGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTGAGAAAGAGGGGAGGGAGGAGCGATAGACGAAGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGAGAATCTATTGAGTAGCGAAGTCGTCACAAAGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGCCATAGCTCTTCAATTTCAATTTCTTCTTTTAAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGAAAATAACAAAAATAGATATATTTATAAAAAAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACTCTTATCATCTACTATCTCAAAAGCTCTTTTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GAAACATTCGAGCCGTATTCAATTACGCCATCAATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GAAACATTCGAGCCGTATTCAATTACGCCATCAATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GAAACATTCGAGCCGTATTCAATTACGCCATCAATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTTCTTCATCTCGCGCTTGCTCAAAAGCGCGTTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGCATCAAGTCACGAACTTTCTGCGAGATGGAAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGTCTCGAAAAAATATCGGGACGTTTTTGTTTTCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTCCTTCACTTTGTCGACAATGTGCACTGTATTTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGGCGGAGTATCTCTTTGCCACCCAGTCCGCGCGCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTAACCGCCTCGGTAGACCGCTCCGCACGGTCGTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTGCATTCCGGACAGCTTTCGCTTAAAAAGTTAGCGG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAGAACGAACGCCTGCGCGATAAGCACCGCGAGCGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTTACCTGCAGACTTGTGCCCACCCACTTGATAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGGTCACGGAGCGATACCATGAGTGTTTAGTAGATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGGAGGAGATCAGCTATGCGGATGATACCACCCGTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCAGAAAACTCGCGTCCATCTGATAGATGTACACGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAAACGATCGAGGCGCGGAGACCCTCCTTGCCAGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGTTCAGGAAAAAGTAACCGAGCTGAAGACCATGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGGTGCTATCGCAGGACTGCAGGACATCCTCAATC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGCCGCTCGACTTGACGCCATGCAAAAACAGATAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTGCGAGTTGTGAGAGGCAATAAACTGCTGGGAGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GGGAAGCTGCTTTGCTCGCTGAGATAGCAGCACTTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTTATTGACGCCACCCCGCCGACGAAAAAAAATCAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTTCGGTCTTTACGTTTGTCGCCACGGATACATGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTGTAAATAAATTACATGGCTATTGAAAAACAAATT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATTGTACGACTTTGCTATAAAGTCTGAGTTATTAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TATCAACAATCACCGTCATATGTGTAATATACTTGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GGGCAGGCGTATTGCCCCACTTCTCCCCGAATGCAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGAGGAATCATATCAGTGTTTATTTTTTCATCGATT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGGAAGTGGGTAGAAGAAAGCCCCAACGTGTTTAAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CATGACAAAGAGACGGTTATCGGTAGAGGACAGGCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGCGTGGAAGGGGCATGTACACTTGTAGTTCGCCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGACAGGCCCTGCAGCGTGTGAGAGCGGAAATGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTTTCAATCATGATATTTTATTTTTCCTGCAAACGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGCATGTGGGAGCGCGGCGGTCTCTGCTTTACGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCAGCGTGATGAGCGCTTGAGGCTCCTCCATCGAGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAGGATGATTTGGAAAATTTAGTAAGATAGTTGATA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCTTGGAGAAAGCGAAGACCATGAACCTAAGCGTCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GGAAATATAGTTATTGTATCTACTAAAAGACATAGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACCCCATCTTGCAGAGTATATGCGAGCAAAATTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAGTTAGCACAGTTGCTACTATCGTAGTAGCTGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGATAAACTTTCTTCTCGAATTAAGAAAATCGAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGCGGCCATCGAGGCCACCGCCTCCGTCCTCCGCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TATGAAAACAGAAAAGAACTTCTCAGCCCTGAGTTTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CAAACTCAATGATTATCTGTCAAGAAGCAAGAAACGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGTAAAAATTACCCTAGATGCCGAAACGGACGGCCTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CAGAATTTGCACGAACAGTATGATGTTCGTGTTCTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAGCGCGAGACAGGCCGAGCCGGCACAGCTTAGTGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAAACGGCGATAAAATAGCGTTCGAGATTTTCCGCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAGTTGTAGCGATTGTCTCAGTTGCATTACTCCTTAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAATAACGAGAAAAAGAATGCTTAAATTGTTCTTCGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGAAGAGGGTAAACTATTTGCTAATCTTGAATGCTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTCAATATCTTTCATAGCTACTAAAAATTTACGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGCCCCCTCACCCATCTAACCTCGAGCCGTTGAGCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATTACATAATGATAGACGACAGAGATTGTGCAGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTACTGATAATTACGCTGCAAGGTCAGACGGTGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTGCCAGGGCTTGCTGATGCGCGCGCTCCAGCTGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACAGAACCAGCTCCGTCAAATCTCCCGCTTTTTGTC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGCCCCCTCACCCATCTAATCTCGAGCCGCTGAGCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TATTCATTCGCTCAAGCGAGGGCATCCTGCTGCAGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCTCGCGGAGGGAGAGGGTGCCGGTATCCTGCCTCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGAGTCTGTATGTGAAAGTGTAGTTCGAAACATTAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGAATACTTTGAAGTTGTATTCAATTACTTTGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGTTGTGACAGAGCTGCGCCGTCGTGGCTATGATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGAAAGCCCGAAGATAATCTACACGCAAGATTGTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTCATCAGGTGGATATTCTTACTGCTATCCACGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGTCTGCGACGTATCGCAGCTCTGCCAGCTCCGCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCATCTTCGCAGGAAAGAAGAAGGCTCCGTCCTCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AACAGTCAAGGGGGAGCCGACCTCTCCGGCGGATTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCAGTGCGGCCGACAAGGCTAACCTCGCTCAGCTGA
GTTTTAATTTCTGTATGGTGCAATTGAAAT	AATCCATGTTCATGAGGAGAGGATACGAGTTCTATT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTTTTGCTATTGCAGCAAACATATACAATAATAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACTTCATGGATTTAGCGAGATACTCATTATAATTAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCTCAAGCGTCCAAGAAAGTTCAAGAAATTGTACTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TACTATGGTGTCTGCATTTGAGATACGCAAATAGCAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTCAATATCTTTCATTGCGACGAGAAATTTGCGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATCTATGATGATATAGAAGAAGACGACTTGTTGTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTAATGATTTTCTGAAATAAAGAAGCAGTTGCATA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTCAATATCTTTCATTGCGACGAGGAACTTGCGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCCCGTGGTAACTCATACCACCGACTATTCCACCGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTTGAGTAATCATCGAATAATTATCGATTAATCATT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTATATGCATCATATTCTTAAAGTATTTTATTTGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GACGAATACGGCGTTCATCATCGATAGTCGCGATGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGGGCGGCCAACCGGTCACAACAAGAATAGACCGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCCTTCCAGTCGCAGCTTAAGATACTGCGACTAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATTTTCATCAGAGCATAAAAAAGGGCAAACTTTTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATACGAGCACCAAGGCTGCGATACCGATTGCGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTCGAGCAGATCTTCCTGCTCTTTGATGAGTGAGG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCAGGTTGATTATAATGTTGAAGATGCTTTAAGGG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTCGTATCGACTTTCAAGCAGGCTGGAGTGCAGCCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATATGAGATCGGAAACAATTATAGTTGCGTCGATAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCACAATAACCGACAAAATGTCTCGCGTAACGTACAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTCGCCTGTTTTCTTGAACTCCTCACTGATTCGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATGGTGTCGACATCATACGACAATAGATCGTCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATGGTGTCGACATCATACGACAATAGATCGTCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATATTTTTTCAAAAATTGTAAAACTTATTAAGTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAGTTGCTGATTGTCTTAGAATGAAAGGTTATGCTC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATAATATTACATAATGGCACACTGATGGTAAACTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CATGATGTACAAATATATCATGATCGTATACTAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT

>CP025930|11|3|2206736-2214351|PILER-CR
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTGAGAAAGAGGGGAGGGAGGAGCGATAGACGAAGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGAGAATCTATTGAGTAGCGAAGTCGTCACAAAGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGCCATAGCTCTTCAATTTCAATTTCTTCTTTTAAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGAAAATAACAAAAATAGATATATTTATAAAAAAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACTCTTATCATCTACTATCTCAAAAGCTCTTTTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GAAACATTCGAGCCGTATTCAATTACGCCATCAATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GAAACATTCGAGCCGTATTCAATTACGCCATCAATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GAAACATTCGAGCCGTATTCAATTACGCCATCAATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTTCTTCATCTCGCGCTTGCTCAAAAGCGCGTTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGCATCAAGTCACGAACTTTCTGCGAGATGGAAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGTCTCGAAAAAATATCGGGACGTTTTTGTTTTCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTCCTTCACTTTGTCGACAATGTGCACTGTATTTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGGCGGAGTATCTCTTTGCCACCCAGTCCGCGCGCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTAACCGCCTCGGTAGACCGCTCCGCACGGTCGTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTGCATTCCGGACAGCTTTCGCTTAAAAAGTTAGCGG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAGAACGAACGCCTGCGCGATAAGCACCGCGAGCGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTTACCTGCAGACTTGTGCCCACCCACTTGATAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGGTCACGGAGCGATACCATGAGTGTTTAGTAGATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGGAGGAGATCAGCTATGCGGATGATACCACCCGTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCAGAAAACTCGCGTCCATCTGATAGATGTACACGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAAACGATCGAGGCGCGGAGACCCTCCTTGCCAGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGTTCAGGAAAAAGTAACCGAGCTGAAGACCATGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGGTGCTATCGCAGGACTGCAGGACATCCTCAATC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGCCGCTCGACTTGACGCCATGCAAAAACAGATAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTGCGAGTTGTGAGAGGCAATAAACTGCTGGGAGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GGGAAGCTGCTTTGCTCGCTGAGATAGCAGCACTTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTTATTGACGCCACCCCGCCGACGAAAAAAAATCAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTTCGGTCTTTACGTTTGTCGCCACGGATACATGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTGTAAATAAATTACATGGCTATTGAAAAACAAATT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATTGTACGACTTTGCTATAAAGTCTGAGTTATTAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TATCAACAATCACCGTCATATGTGTAATATACTTGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GGGCAGGCGTATTGCCCCACTTCTCCCCGAATGCAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGAGGAATCATATCAGTGTTTATTTTTTCATCGATT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGGAAGTGGGTAGAAGAAAGCCCCAACGTGTTTAAG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CATGACAAAGAGACGGTTATCGGTAGAGGACAGGCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGCGTGGAAGGGGCATGTACACTTGTAGTTCGCCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGACAGGCCCTGCAGCGTGTGAGAGCGGAAATGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTTTCAATCATGATATTTTATTTTTCCTGCAAACGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGCATGTGGGAGCGCGGCGGTCTCTGCTTTACGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCAGCGTGATGAGCGCTTGAGGCTCCTCCATCGAGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAGGATGATTTGGAAAATTTAGTAAGATAGTTGATA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCTTGGAGAAAGCGAAGACCATGAACCTAAGCGTCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GGAAATATAGTTATTGTATCTACTAAAAGACATAGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACCCCATCTTGCAGAGTATATGCGAGCAAAATTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAGTTAGCACAGTTGCTACTATCGTAGTAGCTGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGATAAACTTTCTTCTCGAATTAAGAAAATCGAGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGCGGCCATCGAGGCCACCGCCTCCGTCCTCCGCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TATGAAAACAGAAAAGAACTTCTCAGCCCTGAGTTTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CAAACTCAATGATTATCTGTCAAGAAGCAAGAAACGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGTAAAAATTACCCTAGATGCCGAAACGGACGGCCTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CAGAATTTGCACGAACAGTATGATGTTCGTGTTCTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAGCGCGAGACAGGCCGAGCCGGCACAGCTTAGTGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAAACGGCGATAAAATAGCGTTCGAGATTTTCCGCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TAGTTGTAGCGATTGTCTCAGTTGCATTACTCCTTAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAATAACGAGAAAAAGAATGCTTAAATTGTTCTTCGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGAAGAGGGTAAACTATTTGCTAATCTTGAATGCTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTCAATATCTTTCATAGCTACTAAAAATTTACGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGCCCCCTCACCCATCTAACCTCGAGCCGTTGAGCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATTACATAATGATAGACGACAGAGATTGTGCAGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTACTGATAATTACGCTGCAAGGTCAGACGGTGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTGCCAGGGCTTGCTGATGCGCGCGCTCCAGCTGCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACAGAACCAGCTCCGTCAAATCTCCCGCTTTTTGTC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGCCCCCTCACCCATCTAATCTCGAGCCGCTGAGCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TATTCATTCGCTCAAGCGAGGGCATCCTGCTGCAGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCTCGCGGAGGGAGAGGGTGCCGGTATCCTGCCTCC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGAGTCTGTATGTGAAAGTGTAGTTCGAAACATTAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AGAATACTTTGAAGTTGTATTCAATTACTTTGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCGTTGTGACAGAGCTGCGCCGTCGTGGCTATGATG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TGAAAGCCCGAAGATAATCTACACGCAAGATTGTTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGTCATCAGGTGGATATTCTTACTGCTATCCACGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCGTCTGCGACGTATCGCAGCTCTGCCAGCTCCGCG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCATCTTCGCAGGAAAGAAGAAGGCTCCGTCCTCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AACAGTCAAGGGGGAGCCGACCTCTCCGGCGGATTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCAGTGCGGCCGACAAGGCTAACCTCGCTCAGCTGA
GTTTTAATTTCTGTATGGTGCAATTGAAAT	AATCCATGTTCATGAGGAGAGGATACGAGTTCTATT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTTTTGCTATTGCAGCAAACATATACAATAATAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ACTTCATGGATTTAGCGAGATACTCATTATAATTAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCTCAAGCGTCCAAGAAAGTTCAAGAAATTGTACTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TACTATGGTGTCTGCATTTGAGATACGCAAATAGCAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTCAATATCTTTCATTGCGACGAGAAATTTGCGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATCTATGATGATATAGAAGAAGACGACTTGTTGTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATTAATGATTTTCTGAAATAAAGAAGCAGTTGCATA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTCAATATCTTTCATTGCGACGAGGAACTTGCGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCCCGTGGTAACTCATACCACCGACTATTCCACCGT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTTGAGTAATCATCGAATAATTATCGATTAATCATT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTATATGCATCATATTCTTAAAGTATTTTATTTGAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GACGAATACGGCGTTCATCATCGATAGTCGCGATGC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CGGGCGGCCAACCGGTCACAACAAGAATAGACCGAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TTCCTTCCAGTCGCAGCTTAAGATACTGCGACTAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATTTTCATCAGAGCATAAAAAAGGGCAAACTTTTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATACGAGCACCAAGGCTGCGATACCGATTGCGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CCTCGAGCAGATCTTCCTGCTCTTTGATGAGTGAGG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GCAGGTTGATTATAATGTTGAAGATGCTTTAAGGG
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CTCGTATCGACTTTCAAGCAGGCTGGAGTGCAGCCT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATATGAGATCGGAAACAATTATAGTTGCGTCGATAT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	TCACAATAACCGACAAAATGTCTCGCGTAACGTACAA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GTCGCCTGTTTTCTTGAACTCCTCACTGATTCGTA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATGGTGTCGACATCATACGACAATAGATCGTCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	GATGGTGTCGACATCATACGACAATAGATCGTCGA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AATATTTTTTCAAAAATTGTAAAACTTATTAAGTCA
GTTTTAATTCCTGTATGGTGCAATTGAAAT	AAGTTGCTGATTGTCTTAGAATGAAAGGTTATGCTC
GTTTTAATTCCTGTATGGTGCAATTGAAAT	ATAATATTACATAATGGCACACTGATGGTAAACTT
GTTTTAATTCCTGTATGGTGCAATTGAAAT	CATGATGTACAAATATATCATGATCGTATACTAC
GTTTTAATTCCTGTATGGTGCAATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP025930.1\|AUR50068.1\|2195551_2196316_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|234595
CP025930.1\|AUR50109.1\|2202144_2202882_+\|recombinational-DNA-repair-(RecF-pathway)	unknown	unknown	gnl\|CDD\|376822
CP025930.1\|AUR50309.1\|2221022_2221610_-\|hypothetical-protein	cas5	mkCas0069_cas5_CAS-I-B	unknown
CP025930.1\|AUR49192.1\|2202954_2204703_+\|phosphoglucomutase/phosphomannomutase-alpha/beta/alpha-domain-I	unknown	unknown	gnl\|CDD\|100092
CP025930.1\|AUR50196.1\|2221616_2222282_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
CP025930.1\|AUR49410.1\|2196328_2197666_-\|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl\|CDD\|273571
CP025930.1\|AUR50413.1\|2215873_2216383_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP025930.1\|AUR50233.1\|2192863_2193502_-\|WbqC	unknown	unknown	gnl\|CDD\|378083
CP025930.1\|AUR49808.1\|2191831_2192806_-\|geranyl-diphosphate	unknown	unknown	gnl\|CDD\|223220
CP025930.1\|AUR49101.1\|2218885_2221006_-\|CRISPR-associated-nuclease/helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP025930.1\|AUR50598.1\|2199316_2199676_+\|hypothetical-protein	unknown	unknown	unknown
CP025930.1\|AUR49031.1\|2224864_2227408_-\|inner-membrane-protein-unknown-function	unknown	unknown	gnl\|CDD\|370572
CP025930.1\|AUR50678.1\|2214597_2214861_-\|CRISPR-associated-endoribonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
CP025930.1\|AUR49794.1\|2197815_2198808_-\|inner-membrane-protein	unknown	unknown	gnl\|CDD\|225411
CP025930.1\|AUR49757.1\|2214860_2215877_-\|CRISPR-associated-protein-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
CP025930.1\|AUR49147.1\|2222929_2224861_-\|phosphoglycerol-transferase-Lipoteichoic-acid-synthase-1-arylsulfatase	unknown	unknown	gnl\|CDD\|293739
CP025930.1\|AUR50250.1\|2193522_2194149_-\|signal-peptidase-I-T	unknown	unknown	gnl\|CDD\|274044
CP025930.1\|AUR49704.1\|2216500_2217559_-\|CRISPR-associated-protein-Cas7	cas7	mkCas0088_cas7_CAS-I-B	gnl\|CDD\|273846
CP025930.1\|AUR49345.1\|2194138_2195536_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|182787
CP025930.1\|AUR49452.1\|2217579_2218875_-\|hypothetical-protein	cas8b6	mkCas0111_cas8b6_CAS-I-B	unknown

Protein	Function_ID	Function_description	E-value
CP025930.1\|AUR49101.1\|2218885_2221006_-\|CRISPR-associated-nuclease/helicase-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.46649e-60
CP025930.1\|AUR50109.1\|2202144_2202882_+\|recombinational-DNA-repair-(RecF-pathway)	gnl\|CDD\|376822	pfam02565, RecO_C, Recombination protein O C terminal. Recombination protein O (RecO) is involved in DNA repair and pfam00470 pathway recombination.	1.0899e-18
CP025930.1\|AUR49192.1\|2202954_2204703_+\|phosphoglucomutase/phosphomannomutase-alpha/beta/alpha-domain-I	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
CP025930.1\|AUR50196.1\|2221616_2222282_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	3.8915e-34
CP025930.1\|AUR49410.1\|2196328_2197666_-\|deoxyguanosinetriphosphate-triphosphohydrolase	gnl\|CDD\|273571	TIGR01353, dGTP_triPase, deoxyguanosinetriphosphate triphosphohydrolase, putative. dGTP triphosphohydrolase (dgt) releases inorganic triphosphate, an unusual activity reaction product, from GTP. Its activity has been called limited to the Enterobacteriaceae, although homologous sequences are detected elsewhere. This finding casts doubt on whether the activity is shared in other species. In several of these other species, the homologous gene is found in an apparent operon with dnaG, the DNA primase gene. The enzyme from E. coli was shown to bind coopertatively to single stranded DNA. The biological role of dgt is unknown. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions].	2.51502e-158
CP025930.1\|AUR50413.1\|2215873_2216383_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	3.33235e-68
CP025930.1\|AUR50233.1\|2192863_2193502_-\|WbqC	gnl\|CDD\|378083	pfam08889, WbqC, WbqC-like protein family. This family of proteins are functionally uncharacterized. However it is found in an O-antigen gene cluster in E. coli and other bacteria suggesting a role in O-antigen production. Feng et al. suggest that wbnG may code for a glycine transferase.	6.46629e-44
CP025930.1\|AUR49808.1\|2191831_2192806_-\|geranyl-diphosphate	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	2.96223e-75
CP025930.1\|AUR50068.1\|2195551_2196316_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|234595	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional.	1.9024e-53
CP025930.1\|AUR49031.1\|2224864_2227408_-\|inner-membrane-protein-unknown-function	gnl\|CDD\|370572	pfam09586, YfhO, Bacterial membrane protein YfhO. This protein is a conserved membrane protein. The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system. Some members of this family have been annotated as glycosyl transferases of the PMT family.	1.02575e-05
CP025930.1\|AUR50678.1\|2214597_2214861_-\|CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.78572e-30
CP025930.1\|AUR49794.1\|2197815_2198808_-\|inner-membrane-protein	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	2.14215e-54
CP025930.1\|AUR49757.1\|2214860_2215877_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	5.45203e-164
CP025930.1\|AUR49147.1\|2222929_2224861_-\|phosphoglycerol-transferase-Lipoteichoic-acid-synthase-1-arylsulfatase	gnl\|CDD\|293739	cd16015, LTA_synthase, Lipoteichoic acid synthase like. Lipoteichoic acid (LTA) is an important cell wall polymer found in Gram-positive bacteria. It may contain long chains of ribitol or glycerol phosphate. LTA synthase catalyzes the reaction to extend the polymer by the repeated addition of glycerolphosphate (GroP) subunits to the end of the growing chain.	2.51307e-65
CP025930.1\|AUR50250.1\|2193522_2194149_-\|signal-peptidase-I-T	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	6.50616e-12
CP025930.1\|AUR49704.1\|2216500_2217559_-\|CRISPR-associated-protein-Cas7	gnl\|CDD\|273846	TIGR01875, CRISPR-associated_protein_Cas7/Cst2/DevR, CRISPR-associated autoregulator DevR family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This model represents one such family, represented by MJ0381 of Methanococcus jannaschii. This family includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development. [Regulatory functions, DNA interactions, , ].	0.000103036
CP025930.1\|AUR49345.1\|2194138_2195536_-\|signal-peptidase-I	gnl\|CDD\|182787	PRK10861, PRK10861, signal peptidase I.	5.19884e-17

>CP025930.1|AUR49192.1|2202954_2204703_+|phosphoglucomutase/phosphomannomutase-alpha/beta/alpha-domain-I
MGTDKLLDQVRAKARIWLGTEYDDSTRKAVQAMLDNADTTELVDAFYRDLEFGTGGLRGIMGAGTNRMNRYTVGAATQGLSNYLLREFAGSSDISVVIGYDCRNNSRFFADTAAAVFSANGIGVYLFEELRPTPEISYAIRHLGCKSGVMITASHNPKEYNGYKAYWEDGAQIIAPHDRNIIAEVNRIRSVDEIKFEAKPELIRMIGENIDSAFIAEVKALSLSPESIARHRDIKIVYTPIHGTGSTVVPRALREYGFANIIHVPEQDVVSGDFPTVHSPNPEEPAALALAIAKAEETGADLVLASDPDADRIGVAVRNNEGRIVLINGNEICSLLIYYSIMRRKELGDLHPDDYIVKTIVTTELIRDIAKKEHVSMFDCYTGFKWIAAVIRENEGRRRYIGGGEESYGFLWEDFIRDKSSVSACALFCEMAAWALDRGMSVYRLIRSIYLEYGLYYEKGLSVVRKGKSGAEEIEAMMRNYREYAPVELGGSPVQEILDYASLEGKDFTRGEKFSLDMPTTSNVLQYKTEDGTKVSIRPSGTEPKIKFYIGVHFSVANEQELDRAYIVAEEKIATILHDLGV
>CP025930.1|AUR50109.1|2202144_2202882_+|recombinational-DNA-repair-(RecF-pathway)
MIIVSRAIVLHNTAYNDSYSIAHLFSRESGRVSYLIPRSSKRGKSGGSLRLLISPLNELEITAEHKQHRDLHFIKEAKLCSLHGRIQSDPVRNSIALFLAEFLYLILRLPEADTNLYDFVAFSIDKLEEMDGPMANFHLAFLFRLLVPLGLIPDLQFGGSVIPRWFDPADGRFVPNAPAHGRGIPPHQSTYLQLFRRITFDNMKAFRLSRAERRQVLDYLVDYYRFHLPPFPLLKTPDILSTLFD
>CP025930.1|AUR50598.1|2199316_2199676_+|hypothetical-protein
MKERLNQTVRYFLPILFAVYAGLVISFTHVHIINGVIIVHSHVQWGDNESNPQDNPHSDSELILYNQLSAIFTTYLDTPAIDLKEPVRVVGVVPFFCDNLIALISELTPSNHLRAPPVA
>CP025930.1|AUR49794.1|2197815_2198808_-|inner-membrane-protein
MNTDNPKSHISRIAYPAIIVFLILTLLGSLVERFHPFTSWLTPPVALLMGLAYALIFGSTHRRANKLGSKVLLQYSVVGLGFGMNLGESLASGRDGMMFTIISVFGTLLLGWFIGRKILQMNRNTSALIGAGTAICGGSAIAAVGPILKAEEHEMSVALGTVFLLNAVALFIFPSIGHWLALDQQQFGTWAAIAIHDTSSVVGAGSAYGEEALRVATTIKLTRALWIVPLTLVFSFVYKTKGAKRFPVPLFILFFIGAIILNTYLLEAYFPEVGRFVASLARKGLTLSLFFIGASLTKEVIASVGVRALLQGLFLWILISVGSLAFILLI
>CP025930.1|AUR49410.1|2196328_2197666_-|deoxyguanosinetriphosphate-triphosphohydrolase
MMQWERLLSDKRVGMEHYHQPKQSAQPWERTDFERDYDRMVFSSPFRRLQNKAQVFPLAGNIFVHNRLTHSLEVSCVGRSLGNNITRGLKARYGELPWESGAISAIVSAACLAHDMGNPPFGHSGERAISAYFREGKGRVWEDAVRKEGGRWEDFLHFEGNANAFRLLTHQFEGRRKGGFALTYSTVASIVKYPYSSEMAGKAGKFGFFATEEDTFLMIAEELGMLCRNEHPVKYARYPLVYLVEAADDICYQIMDIEDAYKLRILTYAETENLFLAFCPEEELRHIRGVLDHITDANEQIAYLRSRVISLLVESCTRVFLDHEDEILSGTFSGTLIGAMEPRLKEAYGACARMAYSKIYVARDVVDVELAGHQIFGALIDKMMEALTNPDHAYSRTLLSRVSTQYNIREESLYGKIQCTLDYISGMTDIYALDLYRKITGMNLR
>CP025930.1|AUR50068.1|2195551_2196316_-|4-hydroxy-tetrahydrodipicolinate-reductase
MALAAGYGSFFQEENPMKIVLIGYGKMGHVIERIACSRGHEVVLTIDAGEEDRFDSIAFRSADVAIEFTRPDAAYANCSRCMDKSVPVVCGTTGWTERLPELEERCRREGKTLFWASNFSIGVNLFFSLSRMFARLMSRHDQYRPHLTEIHHVHKLDAPSGTAITLAEGLIAESPSLDAWRLTETPEENELPITSIREGEVPGTHSISYTSEVDRLTICHEAFGREGFALGAVLAAEYAATHKGFLTMNDLISL
>CP025930.1|AUR49345.1|2194138_2195536_-|signal-peptidase-I
MTFHWKDLTPWRRIKGVAITILYLLFCIWAGPFWLIFLPLIVDYYFFHIIKWGWYKNIRNKTLRIICSWVADIIYCVVAVTFIFAFLFQNFAIPTSSLEKTLLIGDYLFVSKLSYGPRSPMTPLGVPLTHNTMPLTGGKSFSDKPLLPYKRLKGFGHVKEGDLVVFNFPAGDTVAVKQPNPDYYMWKKLVGREELWSNPDFYGEIVYRPVDRRDHYVKRCVGMPGQELSIRNNQIYIDGKEQRNPRNMQLNYLVRMSREMSVDLIDELGISYDDVRAVSSEELKASVGSNLIDSASNQPQIIYHLPLTQGMLDKLQAEPSFVKAVEEPTPIGPLYPLEYETGWTRDNYGPIVIPAKGMTVRLTPLNLALYSRCIRNFEGNKLVQKADGTVLINGRPADSYTFKMDYYFMMGDNRHNSADSRYWGFVPEDHIVGKPVFIWLSLNKDKSLFGGKIRFGRMMRTVNAD
>CP025930.1|AUR50250.1|2193522_2194149_-|signal-peptidase-I-T
MQIKSRYRNRIFFIGLPAVVLLSAVLIRLFLVTTYRVRSDAMLPTYRSGKLLWINRIASPDRGDVLVIKYRQDGEADSRFYLARLIGLPGDTLFLSKGGVVANRQKLKLPTSLLPREPYKIIVPRNDRTYRLTPLSLLACRRAIEEECSSNISFRRGKLYRDGAETAFFHFRRNYYWILADNPASGPDSRHLGIVPEESIVGVVMNAN
>CP025930.1|AUR50233.1|2192863_2193502_-|WbqC
MNLLSPSDPIVLSTAYLPPIQYFTKLLHREGVLLETAENFVKQSYRNRCHIAGPEGMQPLTIPVEKSPSPKAPIRDIRISEHGNWRHLHLNALISSYGSAPFFDHYMTEIEPFYRHKYTFLWDFNLDLLSVCLEWLDISPLIMFTSEYVEDCPNDFRYSIRPKQAPEDESFRPRVYYRTFAHKYGFLPNLSIVDLIFHEGPSAIQTLKECIR
>CP025930.1|AUR49808.1|2191831_2192806_-|geranyl-diphosphate
MTTLEAIQAPINGFVKDFHHSFEHALDSQSEWMTKAIKILNGSTGKHVRPLLTGLVAAVCAGKTNSTTLEAAVLLEMIHTATLIHDDVIDMASTRRGVPTLNAFFDNRVAVLMGDFVLSSALMRAIALNDIRIITIISQLGRELSEGEIRQFETADKVIIDEDIYMGVIRQKTAMLFSACAEVGAITVQAPVEIVEKVKRVGELLGYAFQIRDDIFDYYRNDVGKPTGNDIREGKITLPLLFALKNEQSALRDHCLTILDQKAFSEEDLQLLTSFAIEHGGIVYAERKMAEFIDKAKAELAVFPDSDALQSLLALADFIVQRAK
>CP025930.1|AUR50678.1|2214597_2214861_-|CRISPR-associated-endoribonuclease-Cas2
MYIILVYDIGEKRVGKMLKLCRKYLNWIQNSVFEGEISEVKLLELKSRAARIMEKEEDSLIIFSSRQERWLEKEIIGKERSATDIFL
>CP025930.1|AUR49757.1|2214860_2215877_-|CRISPR-associated-protein-Cas1
MKKTYYLFNPGELSRKDNTIRFVPIQEGENGQEQAGQARYIPVEGISDFYVFGSLRANSSLYNFLGSNDIAVHFFDYYENYTGSFMPRDFLLSGKMLLAQASAYKNKKKRLFLARKFIEGAASNMQKNLAYYNNRGKDMQPMMELIDKYSLRLEETTTIEALMGIEGNIRQAYYDAFNLIIDPFEMGARSKQPPQNEVNALISFGNMMCYTLCLKAIHQSQLNPTISFLHTPGERRYSLCLDISEVFKPILVDRTIFKVMNKRIIQAKHFDKQLNKCILNPSGKKLFVQAFEERLSETIRHRKLNRSISFKHLVKLECYKIAKDILGIEEYQPFKMYW
>CP025930.1|AUR50413.1|2215873_2216383_-|CRISPR-associated-protein-Cas4
MIITGTHFNYHQVCRRKLWLFSAGITMEHTSDLVYEGKLIHETTYQQRPERYQELELDGIKIDFYDAKNRVVHEVKKSNKISPAHRLQLLYYLYVLERNGVLGATGILEYPTLRKKEEVILSDIDRERIREIEQEILQIISHEDCPPVIDSGICKNCSYYEFCFSGEEQ
>CP025930.1|AUR49704.1|2216500_2217559_-|CRISPR-associated-protein-Cas7
MKPYIYLRGLKRAEHTVFCVQDGQKTYYDAQYDRSLAYSSGQQVKRSVLEAFTDCLNVQMAPITFNYEISSKKELTQKEPWSPCDPEYADQLIGGWMRAGDGITKKRRSPLSVSAMRPLHPLLCGVSKENLTFDRSDRPDNHPVNVRLAGQSSLLSEEEIESFLRDTGSTLTRRHWIPDNKRASGLFVYDIAIDLRTLFSVSLNQHDPEIDPETIKKLRANGWVESETVFGKCLVLPKAGRDKIIPALAHALIHWRITSNQARTFSLMETLAIAISDKANAQAGAIRAKLVDDGSEKPKAKPIVDEKAGAELFITLPCAAHVVVENESADALDAAEKRLIEMLQAFDYENQL
>CP025930.1|AUR49452.1|2217579_2218875_-|hypothetical-protein
MVTSVIGKIFLKAYNERNNTDYAPKGFFLDIYYPLFFGQEKYLMTAGNSPFENPKISWKDMILGKKHFETAERRAERLEKFVEKIDSGIADASIAIGYPSIDPLSTTSGQVSIPRNEIDASESYLSWIGAGLGVGVQGGMTILFNKPELLLDIFEGWKEYRRHLDKTPSMRGNQINTWNGQWIKKLYDSKDCSLDFSDVYSTKDGIMEVSILPWAQLLVSISKRFEDPKMMGYIYNIGQTNTTIGFIPFVLWPIRKANELFDRYFGADKYKDAVKLFGTAIGFAKACSEGSVGLKAMEPKGLSDYMRKGKIPVCKAGNEEQTIQYNTYQIWLLAMLNNEELWGKSKEFAQTLQLFGSGGKAGRTGRTNAIKLLLEATNKKVFIERLTAIVEESEVAKELEEMASIVHLMPSDNVPYFLTLIRFHYAVINKQ
>CP025930.1|AUR49101.1|2218885_2221006_-|CRISPR-associated-nuclease/helicase-Cas3
MSRYEHIFAKSDGTPLLQHLQDVAKAAEVMAQHWGLSTDMARKGAHLHDIGKASPIFQSRLKAEDNLGGDVFRHEIASIFFISLLPDEVDRRAIIEMIAAHHKSICNDSRELGLLDLDENESRCFKLHSKGFEQWSQEALGILHELGWETHPITMDEARSNYQEAVDYCSSLGRNCSQWKGLLMAADHFASSLDGQTEDTLRKLFVTPDLSYYRNRRSELYPLSLLSADDERQHTLVTAPTGAGKTDFLLRRCRGRVFYTLPFQASINAMYDRLKADLRDTDAQIYPLHAASILKLNGGYERILSRHVGASIKVLTPHQIAALAFGLKGYEVTALDIRGCDVILDEIHTYRKETQAMVLKIVEILVALGCRIHIGTATMPTDLYTGLLRLLGGETAVYEVKLPKEVLKGFDRHTIHKAGSMEDVEPVIQKAIEQSQKILMVCNQVKRAQQLYQEVVGKYPAIPTLLIHSRFKRGHRAQLELELKERYNQCQGPCIVVSTQVVEVSLDISFDMMLTECAPIDALIQRFGRINRKRSLETIGQTKPIYVIAPPENEKEALPYELEILQRSYSSLPHCEVLHEADVQQLLDAVYPEVMALDINMHTIFQDGEWVMKELKHNSKSALFKILDINSACCIMESDREEYENGNYINRTPLEIPVPQSIRFKQLVATNCGAHPFVIPDRAYDSKLGLMEEFADSRYYKSFEIF
>CP025930.1|AUR50309.1|2221022_2221610_-|hypothetical-protein
MEDKIFFVVHYTGPFGYIKPWSAVRDGETYSQQFLTPSIIEGMEKKLFPEMLIKKGIHKIARHKLSCMSMSVQQEKTQTQAWEGKGKGKGRTYTRPQSILKRGVMLHPSLYLAFTSEEDAVIAARQHLCLCRNEDVVLPDTEILKMDEETFNALPGFELRFGKDYPDAFMVGFNRFDENTPMYGRIEIGGEAILQ
>CP025930.1|AUR50196.1|2221616_2222282_-|CRISPR-associated-endoribonuclease-Cas6
MRIELSIKADDSLVSFSHQHLLVGTLQKWLGENDMHGKSISYSFSRLNGGKFVSELNSILFTDWANMFVSAHDPELIRRMLAGIRQDPEMFKSLCVREVTVIEDPDMTDREIFFPAGPILLKRWREDNGFDHIVYTDEAANALLTENLRKKLQAVGIDDPTATASFVPDQGKAKVMLIDYRGVKNKASWCPIRIIGNAETKLFAWNAGIGNSTGIGFGAIK
>CP025930.1|AUR49147.1|2222929_2224861_-|phosphoglycerol-transferase-Lipoteichoic-acid-synthase-1-arylsulfatase
MKTLFERGELLFRKRSGFCYVIGVFVLFLLYFLFQKVIFLLVYSGQLAGIGTSSGDIAAIFLYGLRHDAAVAAYLTVLPLLFAGINAIAGWGEKKIGRIQRQILKHYYTLISFFVGLIYTADLMLFGYWGFRLDATPLFYLRQPQEAMASATAPQLLIGLLITVVFVCIPAFVLHRFHRRYFPTKVVAHPHIADIWKPVVGGAFLFLLIRGGVGVATLNVGSVFHSPKQLHNQVAVNPVFSFLYTCMHSEEDYSNYQFLSEEDCIKAFEQLRLYGCSDGSEVRESASDSTERILSTDRPNIVLILLESFSANAVGCLGGTPGHTPCIDSLAQNGILFSQAFASSFRTDRGTVATLSGYPSQPNSSIIKYPNKVRNLPGIAASLRTVGYSTHHLYGGDADFTNVRSYLYATGYDEVTDVSSFPIKTRLSKWGTPDHISFPRLLDDCRRLEKEKKPYFYSFLTLSSHEPFDVPSQHHPDPYLNSVFYTDSCFGDYIRGMQQSPQWKNTLIITVSDHGYPYPADQAMPDQPGRYGIVMLWTGGAILRPIRFEEVVSQSDLPATLLAQLGLAHDEFVFSKDVFRRNSPHFAYFSFPGLVGLATSEGTTIYDFAGDKIVYGHEAPLADQRAIAAKVMLQSVMKDMLSR
>CP025930.1|AUR49031.1|2224864_2227408_-|inner-membrane-protein-unknown-function
MKENEKPTAAAGTVTTTDKTKPDWRKILPYAAVVLLFIALALAYFYPASFDGRVLFQGDVAGASGTAQDVRDWEAQTGEHSYWTNSLFGGMPMYQISPSYPSTHTLQTIQDVLTLRKPFYLLGTYAWMLFAMMGGFFLFLRSLRIRILPAVIGSIAWAFSSYFLILIMAGHIWKLTAMCFIPPTLAGMIWIYNGRWLAGGSVMAFFTALQVLANHVQMSYYFLFVMFFMVLAFLAEAIQTKRIRHFFLSSAVVVIAGLVGIAVNSTNLFHTYQYGKETMRGGSELTLKQSGAPTDQVTHENKSGLDKAYITQWSYGIGETWSLLIPDIKGGSSGYLGYDEKVMETVNPSYAQAIARMNRYWGDQPFTAGPVYVGAFVLFLFVLGCFIVKGPVKWALLAATILSILLSWGHNMMWLTSFFIDHFPLYDKFRTVSSILVIAEFTIPALAVMALAKIIKEGKPLLKRERTAWVAATLLTLGASLLFALVPSLLGLLSGQEEAMFREAAGHPEAAAIKTTLVDVRSGILASDAWRSFGILAVCGILLWLFFQKRLKATALLVSLAVITLVDLWTVDKRYLNDEHFIDPELVSQRAAPLTEADKQILADKSLGYRVLNLTVDTYNDATTSRWHRSIGGYHAAKLQRYQDLIEHQLSKGNREVVNMLNTKYIIVPGENNRPTPMLNPDAYGPAWPAGSIRWVGNANEEMMALDSNRLTRDIAVVDERFSSESLKRLPALTDSTASISLKEYAPNRQVYEAVSTQPMLGIFSEIYYPHGWTATIDNQAVPIIRANYILRALEVPAGRHKIEFRFDPKSLHITEAIAKTALALLQLGIVWAIARPFFLRGKRPTA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP025930_1	1.1\|110953\|34\|CP025930\|CRISPRCasFinder	110953-110986	34	CP025930.1	1735749-1735782	0	1.0

1. spacer 1.1|110953|34|CP025930|CRISPRCasFinder matches to position: 1735749-1735782, mismatch: 0, identity: 1.0

aggcttccgtctcggatcgtgctatacgtccgat	CRISPR spacer
aggcttccgtctcggatcgtgctatacgtccgat	Protospacer
**********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP025930_5	5.4\|1411093\|29\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411093-1411121	29	AP014421	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C174, * SEQUENCING IN PROGRESS *, 2 ordered pieces	582-610	4	0.862
CP025930_5	5.8\|1411358\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411358-1411387	30	NZ_CP016596	Bacillus cereus strain K8 plasmid pBCM301, complete sequence	143809-143838	4	0.867
CP025930_5	5.8\|1411358\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411358-1411387	30	NZ_CP010112	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence	299767-299796	4	0.867
CP025930_5	5.8\|1411358\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411358-1411387	30	MF360958	Salicola phage SCTP-2, complete genome	247181-247210	4	0.867
CP025930_5	5.4\|1411093\|29\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411093-1411121	29	AP022644	Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence	332467-332495	5	0.828
CP025930_5	5.4\|1411093\|29\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411093-1411121	29	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	223481-223509	5	0.828
CP025930_5	5.4\|1411093\|29\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411093-1411121	29	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	465457-465485	5	0.828
CP025930_5	5.4\|1411093\|29\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411093-1411121	29	CP024686	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence	220618-220646	5	0.828
CP025930_5	5.4\|1411093\|29\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411093-1411121	29	NZ_CP045608	Bacillus cereus strain SB1 plasmid p2, complete sequence	13159-13187	5	0.828
CP025930_5	5.4\|1411093\|29\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411093-1411121	29	NZ_CP018741	Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence	55217-55245	5	0.828
CP025930_5	5.4\|1411093\|29\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411093-1411121	29	NZ_CP016590	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence	47627-47655	5	0.828
CP025930_5	5.8\|1411358\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411358-1411387	30	MH616687	Microviridae sp. isolate ctcg602, complete genome	4347-4376	5	0.833
CP025930_5	5.11\|1411556\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411556-1411585	30	NZ_CP016699	Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence	66240-66269	5	0.833
CP025930_5	5.4\|1411093\|29\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411093-1411121	29	MT774397	CrAssphage cr56_1, complete genome	87518-87546	6	0.793
CP025930_5	5.8\|1411358\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411358-1411387	30	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	41255-41284	6	0.8
CP025930_5	5.8\|1411358\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411358-1411387	30	NC_011775	Bacillus cereus G9842 plasmid pG9842_209, complete sequence	71677-71706	6	0.8
CP025930_5	5.8\|1411358\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411358-1411387	30	NZ_CP042473	Spiroplasma citri strain CC-2 plasmid pScpCC2-1, complete sequence	18585-18614	6	0.8
CP025930_5	5.10\|1411490\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411490-1411519	30	JQ692107	Vibrio vulnificus phage SSP002, complete genome	71734-71763	6	0.8
CP025930_5	5.10\|1411490\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411490-1411519	30	MF754115	Vibrio phage vB_VpaS_KF5, complete genome	71923-71952	6	0.8
CP025930_5	5.12\|1411622\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411622-1411651	30	JQ692107	Vibrio vulnificus phage SSP002, complete genome	71734-71763	6	0.8
CP025930_5	5.12\|1411622\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411622-1411651	30	MF754115	Vibrio phage vB_VpaS_KF5, complete genome	71923-71952	6	0.8
CP025930_11	11.116\|2214091\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2214091-2214126	36	LT598654	Phage NCTB genome assembly, complete genome: monopartite	53303-53338	6	0.833
CP025930_5	5.2\|1410961\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1410961-1410990	30	KF301602	Caulobacter phage Cr30, complete genome	42560-42589	7	0.767
CP025930_5	5.4\|1411093\|29\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411093-1411121	29	CP046512	Bacillus cereus strain JHU plasmid p1, complete sequence	79063-79091	7	0.759
CP025930_5	5.9\|1411424\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411424-1411453	30	NC_014839	Pantoea sp. At-9b plasmid pPAT9B02, complete sequence	170458-170487	7	0.767
CP025930_5	5.10\|1411490\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411490-1411519	30	MK249146	Blackfly microvirus SF02 isolate 036, complete genome	2946-2975	7	0.767
CP025930_5	5.10\|1411490\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411490-1411519	30	MH617089	Microviridae sp. isolate cthd782, complete genome	2922-2951	7	0.767
CP025930_5	5.12\|1411622\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411622-1411651	30	MK249146	Blackfly microvirus SF02 isolate 036, complete genome	2946-2975	7	0.767
CP025930_5	5.12\|1411622\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411622-1411651	30	MH617089	Microviridae sp. isolate cthd782, complete genome	2922-2951	7	0.767
CP025930_7	7.3\|1839284\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1839284-1839313	30	NC_017241	Borreliella afzelii PKo plasmid lp54, complete sequence	26355-26384	7	0.767
CP025930_7	7.3\|1839284\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1839284-1839313	30	NZ_CP009214	Borreliella afzelii Tom3107 plasmid lp54, complete sequence	31805-31834	7	0.767
CP025930_5	5.1\|1410895\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1410895-1410924	30	LT598654	Phage NCTB genome assembly, complete genome: monopartite	177254-177283	8	0.733
CP025930_5	5.2\|1410961\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1410961-1410990	30	NZ_CP033935	Chryseobacterium balustinum strain KC_1863 plasmid unnamed, complete sequence	17604-17633	8	0.733
CP025930_5	5.2\|1410961\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1410961-1410990	30	NZ_CP018322	Alteromonas macleodii strain Te101 plasmid pTE101a, complete sequence	222756-222785	8	0.733
CP025930_5	5.2\|1410961\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1410961-1410990	30	JQ768459	Pseudomonas phage Lu11, complete genome	62081-62110	8	0.733
CP025930_5	5.2\|1410961\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1410961-1410990	30	MH133207	Acinetobacter phage vB_AbaM_B9, complete genome	60513-60542	8	0.733
CP025930_5	5.8\|1411358\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411358-1411387	30	MK496782	Capybara microvirus Cap3_SP_407, complete genome	3617-3646	8	0.733
CP025930_5	5.8\|1411358\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411358-1411387	30	NZ_KU356480	Vibrio parahaemolyticus strain VPS92 plasmid pVPS92-VEB, complete sequence	210066-210095	8	0.733
CP025930_5	5.8\|1411358\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411358-1411387	30	NZ_LR214973	Mycoplasma bovirhinis strain NCTC10118 plasmid 2	7205-7234	8	0.733
CP025930_5	5.8\|1411358\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411358-1411387	30	NZ_CP053812	Vibrio cholerae strain W6G plasmid pW6G, complete sequence	53545-53574	8	0.733
CP025930_5	5.8\|1411358\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411358-1411387	30	NZ_CP053815	Vibrio cholerae strain W7G plasmid pW7G, complete sequence	9377-9406	8	0.733
CP025930_5	5.8\|1411358\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411358-1411387	30	NZ_LN831184	Vibrio cholerae isolate V. cholerae 116-14 plasmid pNDM-116-14, complete sequence	166790-166819	8	0.733
CP025930_5	5.10\|1411490\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411490-1411519	30	NC_014839	Pantoea sp. At-9b plasmid pPAT9B02, complete sequence	269907-269936	8	0.733
CP025930_5	5.12\|1411622\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411622-1411651	30	NC_014839	Pantoea sp. At-9b plasmid pPAT9B02, complete sequence	269907-269936	8	0.733
CP025930_7	7.3\|1839284\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1839284-1839313	30	NC_022879	Enterococcus mundtii QU 25 plasmid pQY182, complete sequence	87396-87425	8	0.733
CP025930_7	7.3\|1839284\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1839284-1839313	30	MG543995	Staphylococcus phage UPMK_1, partial genome	130506-130535	8	0.733
CP025930_7	7.4\|1839350\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1839350-1839379	30	MK448927	Streptococcus phage Javan394, complete genome	32252-32281	8	0.733
CP025930_9	9.1\|2155454\|35\|CP025930\|CRISPRCasFinder	2155454-2155488	35	MW149107	Microvirus sp. isolate gila1, complete genome	4108-4142	8	0.771
CP025930_10	10.1\|2204879\|34\|CP025930\|CRISPRCasFinder	2204879-2204912	34	NZ_CP035568	Lactobacillus plantarum strain SRCM103300 plasmid unnamed2	55694-55727	8	0.765
CP025930_11	11.119\|2214288\|34\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2214288-2214321	34	AP013822	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15B-MedDCM-OCT-S24-C103, * SEQUENCING IN PROGRESS *	633-666	8	0.765
CP025930_11	11.119\|2214288\|34\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2214288-2214321	34	AP014453	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S36-C132, * SEQUENCING IN PROGRESS *, 5 ordered pieces	9207-9240	8	0.765
CP025930_11	11.119\|2214288\|34\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2214288-2214321	34	AP013824	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15B-MedDCM-OCT-S29-C131, * SEQUENCING IN PROGRESS *	9312-9345	8	0.765
CP025930_11	11.119\|2214288\|34\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2214288-2214321	34	AP013823	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15B-MedDCM-OCT-S26-C119, * SEQUENCING IN PROGRESS *	16697-16730	8	0.765
CP025930_5	5.2\|1410961\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1410961-1410990	30	NZ_CP016558	Vibrio coralliilyticus strain 58 plasmid pVs58, complete sequence	50623-50652	9	0.7
CP025930_5	5.2\|1410961\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1410961-1410990	30	NZ_KP688397	Vibrio parahaemolyticus strain V36 plasmid pVPH1, complete sequence	117290-117319	9	0.7
CP025930_5	5.2\|1410961\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1410961-1410990	30	NZ_CP040989	Vibrio furnissii strain FDAARGOS_777 plasmid unnamed1, complete sequence	75847-75876	9	0.7
CP025930_5	5.2\|1410961\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1410961-1410990	30	NZ_CP026317	Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence	143928-143957	9	0.7
CP025930_5	5.2\|1410961\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1410961-1410990	30	NZ_CP026319	Vibrio campbellii strain BoB-90 plasmid unnamed 3, complete sequence	37290-37319	9	0.7
CP025930_5	5.2\|1410961\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1410961-1410990	30	NZ_CP023040	Komagataeibacter saccharivorans strain CV1 plasmid unnamed4, complete sequence	27110-27139	9	0.7
CP025930_5	5.2\|1410961\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1410961-1410990	30	MN693538	Marine virus AFVG_25M196, complete genome	15032-15061	9	0.7
CP025930_5	5.4\|1411093\|29\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411093-1411121	29	NZ_CP025885	Escherichia coli strain 503440 plasmid p503440_68, complete sequence	60688-60716	9	0.69
CP025930_5	5.4\|1411093\|29\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411093-1411121	29	NZ_CP024882	Citrobacter freundii strain AR_0022 plasmid unitig_1_pilon, complete sequence	18951-18979	9	0.69
CP025930_5	5.4\|1411093\|29\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411093-1411121	29	NZ_CP037863	Citrobacter sp. LY-1 plasmid unnamed2, complete sequence	80814-80842	9	0.69
CP025930_5	5.10\|1411490\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411490-1411519	30	AP013827	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15C-MedDCM-OCT-S33-C119, * SEQUENCING IN PROGRESS *	17631-17660	9	0.7
CP025930_5	5.10\|1411490\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411490-1411519	30	MT178766	Listeria virus P100plus, complete genome	100202-100231	9	0.7
CP025930_5	5.10\|1411490\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411490-1411519	30	MT178767	Listeria virus P200, complete genome	100203-100232	9	0.7
CP025930_5	5.10\|1411490\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411490-1411519	30	DQ004855	Listeria bacteriophage P100, complete genome	96559-96588	9	0.7
CP025930_5	5.10\|1411490\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411490-1411519	30	AP013826	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15C-MedDCM-OCT-S23-C82, * SEQUENCING IN PROGRESS *	17442-17471	9	0.7
CP025930_5	5.10\|1411490\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411490-1411519	30	AP013811	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S36-C173, * SEQUENCING IN PROGRESS *	3081-3110	9	0.7
CP025930_5	5.10\|1411490\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411490-1411519	30	JX519263	Uncultured Mediterranean phage MEDS1 group fosmid MedDCM-OCT-S13-C2, complete sequence	7480-7509	9	0.7
CP025930_5	5.12\|1411622\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411622-1411651	30	AP013827	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15C-MedDCM-OCT-S33-C119, * SEQUENCING IN PROGRESS *	17631-17660	9	0.7
CP025930_5	5.12\|1411622\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411622-1411651	30	MT178766	Listeria virus P100plus, complete genome	100202-100231	9	0.7
CP025930_5	5.12\|1411622\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411622-1411651	30	MT178767	Listeria virus P200, complete genome	100203-100232	9	0.7
CP025930_5	5.12\|1411622\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411622-1411651	30	DQ004855	Listeria bacteriophage P100, complete genome	96559-96588	9	0.7
CP025930_5	5.12\|1411622\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411622-1411651	30	AP013826	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15C-MedDCM-OCT-S23-C82, * SEQUENCING IN PROGRESS *	17442-17471	9	0.7
CP025930_5	5.12\|1411622\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411622-1411651	30	AP013811	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S36-C173, * SEQUENCING IN PROGRESS *	3081-3110	9	0.7
CP025930_5	5.12\|1411622\|30\|CP025930\|PILER-CR,CRISPRCasFinder,CRT	1411622-1411651	30	JX519263	Uncultured Mediterranean phage MEDS1 group fosmid MedDCM-OCT-S13-C2, complete sequence	7480-7509	9	0.7
CP025930_11	11.7\|2206899\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2206899-2206934	36	NC_048665	Clostridium phage phiCDHM14, complete genome	3290-3325	9	0.75
CP025930_11	11.7\|2206899\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2206899-2206934	36	NC_028838	Clostridium phage phiCD506, complete genome	3750-3785	9	0.75
CP025930_11	11.7\|2206899\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2206899-2206934	36	HG796225	Clostridium phage phiCDHM13 complete genome	3290-3325	9	0.75
CP025930_11	11.7\|2206899\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2206899-2206934	36	LN681538	Clostridium phage phiCD481-1, complete genome	3773-3808	9	0.75
CP025930_11	11.7\|2206899\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2206899-2206934	36	HG798901	Clostridium phage phiCDHM11 complete genome	3290-3325	9	0.75
CP025930_11	11.37\|2208887\|35\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2208887-2208921	35	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	689855-689889	9	0.743
CP025930_11	11.49\|2209679\|34\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2209679-2209712	34	NZ_CP011518	Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-1, complete sequence	374588-374621	9	0.735
CP025930_11	11.49\|2209679\|34\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2209679-2209712	34	NZ_CP011519	Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-2, complete sequence	97121-97154	9	0.735
CP025930_11	11.71\|2211130\|35\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2211130-2211164	35	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	689855-689889	9	0.743
CP025930_11	11.116\|2214091\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2214091-2214126	36	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	387693-387728	9	0.75
CP025930_11	11.116\|2214091\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2214091-2214126	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	505348-505383	9	0.75
CP025930_11	11.116\|2214091\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2214091-2214126	36	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	288260-288295	9	0.75
CP025930_11	11.116\|2214091\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2214091-2214126	36	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	873701-873736	9	0.75
CP025930_11	11.116\|2214091\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2214091-2214126	36	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	873716-873751	9	0.75
CP025930_11	11.116\|2214091\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2214091-2214126	36	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	323293-323328	9	0.75
CP025930_10	10.1\|2204879\|34\|CP025930\|CRISPRCasFinder	2204879-2204912	34	NZ_AP018564	Staphylococcus argenteus strain 58113 plasmid p2, complete sequence	42212-42245	10	0.706
CP025930_11	11.7\|2206899\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2206899-2206934	36	MK473382	Clostridium phage JD032, complete genome	31354-31389	10	0.722
CP025930_11	11.7\|2206899\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2206899-2206934	36	NC_023599	Bacillus phage phiCM3, complete genome	5704-5739	10	0.722
CP025930_11	11.31\|2208492\|36\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2208492-2208527	36	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1062351-1062386	10	0.722
CP025930_11	11.4\|2206700\|36\|CP025930\|CRISPRCasFinder,CRT	2206700-2206735	36	NZ_CP027024	Streptomyces sp. WAC00288 plasmid p2, complete sequence	12789-12824	11	0.694
CP025930_11	11.4\|2206700\|36\|CP025930\|CRISPRCasFinder,CRT	2206700-2206735	36	NZ_CP027023	Streptomyces sp. WAC00288 plasmid p1, complete sequence	287-322	11	0.694
CP025930_11	11.4\|2206700\|36\|CP025930\|CRISPRCasFinder,CRT	2206700-2206735	36	NZ_CP027026	Streptomyces sp. WAC00288 plasmid p4, complete sequence	11942-11977	11	0.694
CP025930_11	11.56\|2210141\|34\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2210141-2210174	34	CP033569	Acinetobacter pittii strain 2014N21-145 plasmid p2014N21-145-1, complete sequence	134846-134879	11	0.676
CP025930_11	11.56\|2210141\|34\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2210141-2210174	34	NZ_CP010358	Acinetobacter johnsonii XBB1 plasmid pXBB1-8, complete sequence	98080-98113	11	0.676
CP025930_11	11.56\|2210141\|34\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2210141-2210174	34	NZ_CP029396	Acinetobacter defluvii strain WCHA30 plasmid pOXA58_010030, complete sequence	291951-291984	11	0.676
CP025930_11	11.56\|2210141\|34\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2210141-2210174	34	NZ_CP010351	Acinetobacter johnsonii XBB1 plasmid pXBB1-9, complete sequence	333784-333817	11	0.676
CP025930_11	11.56\|2210141\|34\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2210141-2210174	34	NZ_CP032285	Acinetobacter sp. WCHA55 plasmid pOXA58_010055, complete sequence	315981-316014	11	0.676
CP025930_11	11.56\|2210141\|34\|CP025930\|CRISPRCasFinder,CRT,PILER-CR	2210141-2210174	34	NZ_CP043309	Acinetobacter johnsonii strain Acsw19 plasmid pAcsw19-2, complete sequence	16539-16572	11	0.676

1. spacer 5.4|1411093|29|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to AP014421 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C174, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 4, identity: 0.862

tttcagtatgataataaaaatacagcatg-	CRISPR spacer
tttcagaatgataataaaaat-cattatgg	Protospacer
****** ************** ** .***

2. spacer 5.8|1411358|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016596 (Bacillus cereus strain K8 plasmid pBCM301, complete sequence) position: , mismatch: 4, identity: 0.867

aaacaatacaaacaacaaatattatgacaa	CRISPR spacer
ggacaatacaaacaacaaatgttataacaa	Protospacer
..******************.****.****

3. spacer 5.8|1411358|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010112 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence) position: , mismatch: 4, identity: 0.867

aaacaatacaaacaacaaatattatgacaa	CRISPR spacer
ggacaatacaaacaacaaatgttataacaa	Protospacer
..******************.****.****

4. spacer 5.8|1411358|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 4, identity: 0.867

aaacaatacaaacaacaaatattatgacaa-	CRISPR spacer
aaacaatacaaacaaataatattac-acaat	Protospacer
***************  *******. ****

5. spacer 5.4|1411093|29|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to AP022644 (Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence) position: , mismatch: 5, identity: 0.828

tttcagtatgataataaaaat-acagcatg	CRISPR spacer
tttcagtatgataatcaaaataacattac-	Protospacer
*************** ***** *** .*.

6. spacer 5.4|1411093|29|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 5, identity: 0.828

tttcagtatgataataaaaat-acagcatg	CRISPR spacer
tttcagtatgataatcaaaataacattac-	Protospacer
*************** ***** *** .*.

7. spacer 5.4|1411093|29|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 5, identity: 0.828

tttcagtatgataataaaaat-acagcatg	CRISPR spacer
tttcagtatgataatcaaaataacattac-	Protospacer
*************** ***** *** .*.

8. spacer 5.4|1411093|29|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to CP024686 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence) position: , mismatch: 5, identity: 0.828

tttcagtatgataataaaaat-acagcatg	CRISPR spacer
tttcagtatgataatcaaaataacattac-	Protospacer
*************** ***** *** .*.

9. spacer 5.4|1411093|29|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045608 (Bacillus cereus strain SB1 plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.828

tttcagtatgataataaaaatacagcatg--	CRISPR spacer
tttcagtatgataatcaaaat--aacattgc	Protospacer
*************** *****  *.***

10. spacer 5.4|1411093|29|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018741 (Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence) position: , mismatch: 5, identity: 0.828

tttcagtatgataataaaaat-acagcatg	CRISPR spacer
tttcagtatgataatcaaaataacattac-	Protospacer
*************** ***** *** .*.

11. spacer 5.4|1411093|29|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016590 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence) position: , mismatch: 5, identity: 0.828

tttcagtatgataataaaaat-acagcatg	CRISPR spacer
tttcagtatgataatcaaaataacattac-	Protospacer
*************** ***** *** .*.

12. spacer 5.8|1411358|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MH616687 (Microviridae sp. isolate ctcg602, complete genome) position: , mismatch: 5, identity: 0.833

aaacaatacaaacaacaaat-attatgacaa	CRISPR spacer
aaacaatacgaacaacaaataagaataaca-	Protospacer
*********.********** *  **.***

13. spacer 5.11|1411556|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016699 (Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence) position: , mismatch: 5, identity: 0.833

ttcaaataagcacgatataatggaacaatt	CRISPR spacer
taataatgagcacggtataatggaacaatt	Protospacer
*   ***.******.***************

14. spacer 5.4|1411093|29|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MT774397 (CrAssphage cr56_1, complete genome) position: , mismatch: 6, identity: 0.793

tttcagtatgataataaaaatacagcatg	CRISPR spacer
tttcagtatcataatcaaaatacagagga	Protospacer
********* ***** ********* . .

15. spacer 5.8|1411358|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 6, identity: 0.8

aaacaatacaaacaacaaatattatgacaa	CRISPR spacer
ataaaatacaaacaacaaagattatataaa	Protospacer
* * *************** *****.  **

16. spacer 5.8|1411358|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NC_011775 (Bacillus cereus G9842 plasmid pG9842_209, complete sequence) position: , mismatch: 6, identity: 0.8

aaacaatacaaacaacaaatattatgacaa	CRISPR spacer
ataaaatacaaacaacaaagattatataaa	Protospacer
* * *************** *****.  **

17. spacer 5.8|1411358|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042473 (Spiroplasma citri strain CC-2 plasmid pScpCC2-1, complete sequence) position: , mismatch: 6, identity: 0.8

aaacaatacaaacaacaaatattatgacaa	CRISPR spacer
aaacaataaaatcaacaaatattggaagaa	Protospacer
******** ** ***********. .* **

18. spacer 5.10|1411490|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to JQ692107 (Vibrio vulnificus phage SSP002, complete genome) position: , mismatch: 6, identity: 0.8

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
taaactagaagcattaaaaacaactttcga	Protospacer
 ***************.**** ***.* .*

19. spacer 5.10|1411490|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MF754115 (Vibrio phage vB_VpaS_KF5, complete genome) position: , mismatch: 6, identity: 0.8

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
taaactagaagcattaaaaacaactttcga	Protospacer
 ***************.**** ***.* .*

20. spacer 5.12|1411622|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to JQ692107 (Vibrio vulnificus phage SSP002, complete genome) position: , mismatch: 6, identity: 0.8

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
taaactagaagcattaaaaacaactttcga	Protospacer
 ***************.**** ***.* .*

21. spacer 5.12|1411622|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MF754115 (Vibrio phage vB_VpaS_KF5, complete genome) position: , mismatch: 6, identity: 0.8

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
taaactagaagcattaaaaacaactttcga	Protospacer
 ***************.**** ***.* .*

22. spacer 11.116|2214091|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to LT598654 (Phage NCTB genome assembly, complete genome: monopartite) position: , mismatch: 6, identity: 0.833

aatattttttcaaaaattgtaaaacttattaagtca-	CRISPR spacer
cctattttttcaaaaactgtaaaacttatt-cgtaac	Protospacer
  **************.*************  ** *

23. spacer 5.2|1410961|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to KF301602 (Caulobacter phage Cr30, complete genome) position: , mismatch: 7, identity: 0.767

cgaactctaacaaaacaaattcttgatgaa	CRISPR spacer
cattttctaacaaatcaaatacttgatgac	Protospacer
*.  .********* ***** ********

24. spacer 5.4|1411093|29|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.759

tttcagtatgataataaaaatacagcatg	CRISPR spacer
tttcagtatgataatcaaaataacatttc	Protospacer
*************** ******  .. *

25. spacer 5.9|1411424|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NC_014839 (Pantoea sp. At-9b plasmid pPAT9B02, complete sequence) position: , mismatch: 7, identity: 0.767

aataatgtagttgggtcagtggcttcggta	CRISPR spacer
atcgaagaagttgtgtcagtggcttcggtt	Protospacer
* ..* * ***** ***************

26. spacer 5.10|1411490|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MK249146 (Blackfly microvirus SF02 isolate 036, complete genome) position: , mismatch: 7, identity: 0.767

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
aaaactagaagcattagaatcaaccttctt	Protospacer
******************* * **..*

27. spacer 5.10|1411490|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MH617089 (Microviridae sp. isolate cthd782, complete genome) position: , mismatch: 7, identity: 0.767

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
aaaactagaagcattagaatcaaccttctt	Protospacer
******************* * **..*

28. spacer 5.12|1411622|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MK249146 (Blackfly microvirus SF02 isolate 036, complete genome) position: , mismatch: 7, identity: 0.767

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
aaaactagaagcattagaatcaaccttctt	Protospacer
******************* * **..*

29. spacer 5.12|1411622|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MH617089 (Microviridae sp. isolate cthd782, complete genome) position: , mismatch: 7, identity: 0.767

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
aaaactagaagcattagaatcaaccttctt	Protospacer
******************* * **..*

30. spacer 7.3|1839284|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NC_017241 (Borreliella afzelii PKo plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.767

gtaaagaagaaaaaagattaattccacttg	CRISPR spacer
ttaaagaaaaaaaaagattaattgggttta	Protospacer
 *******.**************  ..**.

31. spacer 7.3|1839284|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009214 (Borreliella afzelii Tom3107 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.767

gtaaagaagaaaaaagattaattccacttg	CRISPR spacer
ttaaagaaaaaaaaagattaattgggttta	Protospacer
 *******.**************  ..**.

32. spacer 5.1|1410895|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to LT598654 (Phage NCTB genome assembly, complete genome: monopartite) position: , mismatch: 8, identity: 0.733

gctaagacacttcttcgttattgctactaa	CRISPR spacer
ccgataccacatcttcgttattgctactgt	Protospacer
 * * . *** *****************.

33. spacer 5.2|1410961|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033935 (Chryseobacterium balustinum strain KC_1863 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

cgaactctaacaaaacaaattcttgatgaa	CRISPR spacer
tactctgaaacaaaaaaaattcttgatgag	Protospacer
..  **  ******* *************.

34. spacer 5.2|1410961|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018322 (Alteromonas macleodii strain Te101 plasmid pTE101a, complete sequence) position: , mismatch: 8, identity: 0.733

cgaactctaacaaaacaaattcttgatgaa	CRISPR spacer
gatcttttaaaaaagcaaattcttgatgaa	Protospacer
 .  .*.*** ***.***************

35. spacer 5.2|1410961|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to JQ768459 (Pseudomonas phage Lu11, complete genome) position: , mismatch: 8, identity: 0.733

cgaactctaacaaaacaaattcttgatgaa	CRISPR spacer
aagccacagacaaaacaaattcgtgatgaa	Protospacer
 .. * * .************* *******

36. spacer 5.2|1410961|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MH133207 (Acinetobacter phage vB_AbaM_B9, complete genome) position: , mismatch: 8, identity: 0.733

cgaactctaacaaaacaaattcttgatgaa	CRISPR spacer
tcatctctaacaaaatagattcttgatctt	Protospacer
. * ***********.*.*********

37. spacer 5.8|1411358|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MK496782 (Capybara microvirus Cap3_SP_407, complete genome) position: , mismatch: 8, identity: 0.733

aaacaatacaaacaacaaatattatgacaa	CRISPR spacer
gggggataaaaacaacgaatattatgacat	Protospacer
... .*** *******.************

38. spacer 5.8|1411358|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU356480 (Vibrio parahaemolyticus strain VPS92 plasmid pVPS92-VEB, complete sequence) position: , mismatch: 8, identity: 0.733

aaacaatacaaacaacaaatattatgacaa	CRISPR spacer
caacaattcaaacaacaaagattacagcct	Protospacer
 ****** *********** ****...*

39. spacer 5.8|1411358|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214973 (Mycoplasma bovirhinis strain NCTC10118 plasmid 2) position: , mismatch: 8, identity: 0.733

aaacaatacaaacaacaaatattatgacaa	CRISPR spacer
aaacaaaacaaacaacagatatttttggcg	Protospacer
****** **********.***** * .  .

40. spacer 5.8|1411358|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053812 (Vibrio cholerae strain W6G plasmid pW6G, complete sequence) position: , mismatch: 8, identity: 0.733

aaacaatacaaacaacaaatattatgacaa	CRISPR spacer
caacaattcaaacaacaaagattacagcct	Protospacer
 ****** *********** ****...*

41. spacer 5.8|1411358|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053815 (Vibrio cholerae strain W7G plasmid pW7G, complete sequence) position: , mismatch: 8, identity: 0.733

aaacaatacaaacaacaaatattatgacaa	CRISPR spacer
caacaattcaaacaacaaagattacagcct	Protospacer
 ****** *********** ****...*

42. spacer 5.8|1411358|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN831184 (Vibrio cholerae isolate V. cholerae 116-14 plasmid pNDM-116-14, complete sequence) position: , mismatch: 8, identity: 0.733

aaacaatacaaacaacaaatattatgacaa	CRISPR spacer
caacaattcaaacaacaaagattacagcct	Protospacer
 ****** *********** ****...*

43. spacer 5.10|1411490|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NC_014839 (Pantoea sp. At-9b plasmid pPAT9B02, complete sequence) position: , mismatch: 8, identity: 0.733

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
attgaaaagagcattagaaaccacactaaa	Protospacer
*  .  *..*************** *****

44. spacer 5.12|1411622|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NC_014839 (Pantoea sp. At-9b plasmid pPAT9B02, complete sequence) position: , mismatch: 8, identity: 0.733

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
attgaaaagagcattagaaaccacactaaa	Protospacer
*  .  *..*************** *****

45. spacer 7.3|1839284|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NC_022879 (Enterococcus mundtii QU 25 plasmid pQY182, complete sequence) position: , mismatch: 8, identity: 0.733

gtaaagaagaaaaaagattaattccacttg	CRISPR spacer
ataaagaagaaaaaaaattaatcgcagaaa	Protospacer
.**************.******. **   .

46. spacer 7.3|1839284|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MG543995 (Staphylococcus phage UPMK_1, partial genome) position: , mismatch: 8, identity: 0.733

gtaaagaagaaaaaagattaattccacttg	CRISPR spacer
tggcagaagaaaaaggattaattcctaatg	Protospacer
  . **********.**********   **

47. spacer 7.4|1839350|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MK448927 (Streptococcus phage Javan394, complete genome) position: , mismatch: 8, identity: 0.733

ctactcgtgctacacgagttagtaaatgga	CRISPR spacer
agtatattgctacacaagatagtaaatgga	Protospacer
    *  ********.** ***********

48. spacer 9.1|2155454|35|CP025930|CRISPRCasFinder matches to MW149107 (Microvirus sp. isolate gila1, complete genome) position: , mismatch: 8, identity: 0.771

agaagttttaagatctctttcagaaaaaaatctga	CRISPR spacer
aagagttttaagatttctttcagaagaagaattaa	Protospacer
*..***********.**********.**.* .*.*

49. spacer 10.1|2204879|34|CP025930|CRISPRCasFinder matches to NZ_CP035568 (Lactobacillus plantarum strain SRCM103300 plasmid unnamed2) position: , mismatch: 8, identity: 0.765

--cgactgctggcggttgttcttcagcagcacgaat	CRISPR spacer
atcaac--ctggctgttgttcttcagcagaaccggt	Protospacer
  *.**  ***** *************** ** ..*

50. spacer 11.119|2214288|34|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to AP013822 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15B-MedDCM-OCT-S24-C103, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.765

catgatgtacaaatatatcatgatcgtatactac	CRISPR spacer
catgatgtaaaaatatatcatcattagaatctaa	Protospacer
********* *********** **.. *  ***

51. spacer 11.119|2214288|34|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to AP014453 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S36-C132, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 8, identity: 0.765

catgatgtacaaatatatcatgatcgtatactac	CRISPR spacer
catgatgtaaaaatatatcatcattagaatctaa	Protospacer
********* *********** **.. *  ***

52. spacer 11.119|2214288|34|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to AP013824 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15B-MedDCM-OCT-S29-C131, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.765

catgatgtacaaatatatcatgatcgtatactac	CRISPR spacer
catgatgtaaaaatatatcatcattagaatctaa	Protospacer
********* *********** **.. *  ***

53. spacer 11.119|2214288|34|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to AP013823 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15B-MedDCM-OCT-S26-C119, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.765

catgatgtacaaatatatcatgatcgtatactac	CRISPR spacer
catgatgtaaaaatatatcatcattagaatctaa	Protospacer
********* *********** **.. *  ***

54. spacer 5.2|1410961|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016558 (Vibrio coralliilyticus strain 58 plasmid pVs58, complete sequence) position: , mismatch: 9, identity: 0.7

cgaactctaacaaaacaaattcttgatgaa	CRISPR spacer
ctcgactcaaaaaaacaaattcttgatgat	Protospacer
*  . ...** ******************

55. spacer 5.2|1410961|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP688397 (Vibrio parahaemolyticus strain V36 plasmid pVPH1, complete sequence) position: , mismatch: 9, identity: 0.7

cgaactctaacaaaacaaattcttgatgaa	CRISPR spacer
ctcgactcaaaaaaacaaattcttgatgat	Protospacer
*  . ...** ******************

56. spacer 5.2|1410961|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040989 (Vibrio furnissii strain FDAARGOS_777 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

cgaactctaacaaaacaaattcttgatgaa	CRISPR spacer
ctcgactcaaaaaaacaaattcttgatgat	Protospacer
*  . ...** ******************

57. spacer 5.2|1410961|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 9, identity: 0.7

cgaactctaacaaaacaaattcttgatgaa	CRISPR spacer
ctcgactcaaaaaaacaaattcttgatgat	Protospacer
*  . ...** ******************

58. spacer 5.2|1410961|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026319 (Vibrio campbellii strain BoB-90 plasmid unnamed 3, complete sequence) position: , mismatch: 9, identity: 0.7

cgaactctaacaaaacaaattcttgatgaa	CRISPR spacer
ctcgactcaaaaaaacaaattcttgatgat	Protospacer
*  . ...** ******************

59. spacer 5.2|1410961|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023040 (Komagataeibacter saccharivorans strain CV1 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.7

cgaactctaacaaaacaaattcttgatgaa	CRISPR spacer
tccggcataacaaaacaaactctttatgaa	Protospacer
.  . . ************.**** *****

60. spacer 5.2|1410961|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MN693538 (Marine virus AFVG_25M196, complete genome) position: , mismatch: 9, identity: 0.7

cgaactctaacaaaacaaattcttgatgaa	CRISPR spacer
ttgagcaaaacaaaacaaatgcttgatgag	Protospacer
. .* .  ************ ********.

61. spacer 5.4|1411093|29|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025885 (Escherichia coli strain 503440 plasmid p503440_68, complete sequence) position: , mismatch: 9, identity: 0.69

tttcagtatgataataaaaatacagcatg	CRISPR spacer
tttcagtatgatgataaaaattatatgga	Protospacer
************.********   ... .

62. spacer 5.4|1411093|29|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024882 (Citrobacter freundii strain AR_0022 plasmid unitig_1_pilon, complete sequence) position: , mismatch: 9, identity: 0.69

tttcagtatgataataaaaatacagcatg	CRISPR spacer
tttcagtatgatgataaaaattatatgga	Protospacer
************.********   ... .

63. spacer 5.4|1411093|29|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037863 (Citrobacter sp. LY-1 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.69

tttcagtatgataataaaaatacagcatg	CRISPR spacer
tttcagtatgatgataaaaattatatgga	Protospacer
************.********   ... .

64. spacer 5.10|1411490|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to AP013827 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15C-MedDCM-OCT-S33-C119, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
taaaatagaagcattagaaaccgaagttgc	Protospacer
 *** *****************.   * .

65. spacer 5.10|1411490|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MT178766 (Listeria virus P100plus, complete genome) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
tgctacagaatcactagaaaccactctaat	Protospacer
 .   .**** **.***************

66. spacer 5.10|1411490|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MT178767 (Listeria virus P200, complete genome) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
tgctacagaatcactagaaaccactctaat	Protospacer
 .   .**** **.***************

67. spacer 5.10|1411490|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to DQ004855 (Listeria bacteriophage P100, complete genome) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
tgctacagaatcactagaaaccactctaat	Protospacer
 .   .**** **.***************

68. spacer 5.10|1411490|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to AP013826 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15C-MedDCM-OCT-S23-C82, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
taaaatagaagcattagaaaccgaagttgc	Protospacer
 *** *****************.   * .

69. spacer 5.10|1411490|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to AP013811 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S36-C173, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
taaaatagaagcattagaaaccgaagttgc	Protospacer
 *** *****************.   * .

70. spacer 5.10|1411490|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to JX519263 (Uncultured Mediterranean phage MEDS1 group fosmid MedDCM-OCT-S13-C2, complete sequence) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
taaaatagaagcattagaaaccgaagttgc	Protospacer
 *** *****************.   * .

71. spacer 5.12|1411622|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to AP013827 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15C-MedDCM-OCT-S33-C119, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
taaaatagaagcattagaaaccgaagttgc	Protospacer
 *** *****************.   * .

72. spacer 5.12|1411622|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MT178766 (Listeria virus P100plus, complete genome) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
tgctacagaatcactagaaaccactctaat	Protospacer
 .   .**** **.***************

73. spacer 5.12|1411622|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to MT178767 (Listeria virus P200, complete genome) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
tgctacagaatcactagaaaccactctaat	Protospacer
 .   .**** **.***************

74. spacer 5.12|1411622|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to DQ004855 (Listeria bacteriophage P100, complete genome) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
tgctacagaatcactagaaaccactctaat	Protospacer
 .   .**** **.***************

75. spacer 5.12|1411622|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to AP013826 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15C-MedDCM-OCT-S23-C82, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
taaaatagaagcattagaaaccgaagttgc	Protospacer
 *** *****************.   * .

76. spacer 5.12|1411622|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to AP013811 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S36-C173, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
taaaatagaagcattagaaaccgaagttgc	Protospacer
 *** *****************.   * .

77. spacer 5.12|1411622|30|CP025930|PILER-CR,CRISPRCasFinder,CRT matches to JX519263 (Uncultured Mediterranean phage MEDS1 group fosmid MedDCM-OCT-S13-C2, complete sequence) position: , mismatch: 9, identity: 0.7

aaaactagaagcattagaaaccactctaaa	CRISPR spacer
taaaatagaagcattagaaaccgaagttgc	Protospacer
 *** *****************.   * .

78. spacer 11.7|2206899|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 9, identity: 0.75

agccatagctcttcaatttcaatttcttcttttaat	CRISPR spacer
tcttttatttcttcaatatcaatttcttcttttaag	Protospacer
  .. ** .******** *****************

79. spacer 11.7|2206899|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 9, identity: 0.75

agccatagctcttcaatttcaatttcttcttttaat	CRISPR spacer
tcttttatttcttcaatatcaatttcttcttttaag	Protospacer
  .. ** .******** *****************

80. spacer 11.7|2206899|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 9, identity: 0.75

agccatagctcttcaatttcaatttcttcttttaat	CRISPR spacer
tcttttatttcttcaatatcaatttcttcttttaag	Protospacer
  .. ** .******** *****************

81. spacer 11.7|2206899|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 9, identity: 0.75

agccatagctcttcaatttcaatttcttcttttaat	CRISPR spacer
tcttttatttcttcaatatcaatttcttcttttaag	Protospacer
  .. ** .******** *****************

82. spacer 11.7|2206899|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 9, identity: 0.75

agccatagctcttcaatttcaatttcttcttttaat	CRISPR spacer
tcttttatttcttcaatatcaatttcttcttttaag	Protospacer
  .. ** .******** *****************

83. spacer 11.37|2208887|35|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 9, identity: 0.743

tctatctgcgtatagccctcgccgtccacgccctg	CRISPR spacer
tcgttgagcgtataggcctcgccctccacgccggt	Protospacer
**  *  ******** ******* ********

84. spacer 11.49|2209679|34|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011518 (Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-1, complete sequence) position: , mismatch: 9, identity: 0.735

tgacaggccctgcagcgtgtgagagcggaaatgc	CRISPR spacer
ccaccgaacctgcagcgtgtgaaagcggagatat	Protospacer
. ** *. **************.******.**..

85. spacer 11.49|2209679|34|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011519 (Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-2, complete sequence) position: , mismatch: 9, identity: 0.735

tgacaggccctgcagcgtgtgagagcggaaatgc	CRISPR spacer
ccaccgaacctgcagcgtgtgaaagcggagatat	Protospacer
. ** *. **************.******.**..

86. spacer 11.71|2211130|35|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 9, identity: 0.743

tctatctgcgtatagccctcgccgtccacgccctg	CRISPR spacer
tcgttgagcgtataggcctcgccctccacgccggt	Protospacer
**  *  ******** ******* ********

87. spacer 11.116|2214091|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 9, identity: 0.75

aatattttttcaaaaattgtaaaacttattaagtca	CRISPR spacer
tctattttttcaaacattgtaaagcttactccataa	Protospacer
  ************ ********.****.*  .* *

88. spacer 11.116|2214091|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 9, identity: 0.75

aatattttttcaaaaattgtaaaacttattaagtca	CRISPR spacer
tctattttttcaaacattgtaaagcttactccataa	Protospacer
  ************ ********.****.*  .* *

89. spacer 11.116|2214091|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 9, identity: 0.75

aatattttttcaaaaattgtaaaacttattaagtca	CRISPR spacer
tctattttttcaaacattgtaaagcttactccataa	Protospacer
  ************ ********.****.*  .* *

90. spacer 11.116|2214091|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 9, identity: 0.75

aatattttttcaaaaattgtaaaacttattaagtca	CRISPR spacer
tctattttttcaaacattgtaaagcttactccataa	Protospacer
  ************ ********.****.*  .* *

91. spacer 11.116|2214091|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 9, identity: 0.75

aatattttttcaaaaattgtaaaacttattaagtca	CRISPR spacer
tctattttttcaaacattgtaaagcttactccataa	Protospacer
  ************ ********.****.*  .* *

92. spacer 11.116|2214091|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 9, identity: 0.75

aatattttttcaaaaattgtaaaacttattaagtca	CRISPR spacer
tctattttttcaaacattgtaaagcttactccataa	Protospacer
  ************ ********.****.*  .* *

93. spacer 10.1|2204879|34|CP025930|CRISPRCasFinder matches to NZ_AP018564 (Staphylococcus argenteus strain 58113 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.706

cgactgctggcggttgttcttcagcagcacgaat	CRISPR spacer
catctgctgatggttgttcttcagcagttggtgc	Protospacer
*. ******..****************.  * ..

94. spacer 11.7|2206899|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 10, identity: 0.722

agccatagctcttcaatttcaatttcttcttttaat	CRISPR spacer
tcttttatttcttcaatatcaattccttcttttaag	Protospacer
  .. ** .******** ******.**********

95. spacer 11.7|2206899|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NC_023599 (Bacillus phage phiCM3, complete genome) position: , mismatch: 10, identity: 0.722

agccatagctcttcaatttcaatttcttcttttaat	CRISPR spacer
tgttgaatttcttcaatttcaatgccttcttttaag	Protospacer
 *... * .************** .**********

96. spacer 11.31|2208492|36|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 10, identity: 0.722

taaacgatcgaggcgcggagaccctccttgccagta	CRISPR spacer
ccggtgatcgaggcgcgcagacccaccttgccgtga	Protospacer
. ...************ ****** *******.  *

97. spacer 11.4|2206700|36|CP025930|CRISPRCasFinder,CRT matches to NZ_CP027024 (Streptomyces sp. WAC00288 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.694

tccgcgccgcgaggtggagaccctgccggaggcgaa	CRISPR spacer
ggacagccgcgaggtggcgaccctgcgggagaaggt	Protospacer
     ************ ******** ****. *.

98. spacer 11.4|2206700|36|CP025930|CRISPRCasFinder,CRT matches to NZ_CP027023 (Streptomyces sp. WAC00288 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.694

tccgcgccgcgaggtggagaccctgccggaggcgaa	CRISPR spacer
ggacagccgcgaggtggcgaccctgcgggagaaggt	Protospacer
     ************ ******** ****. *.

99. spacer 11.4|2206700|36|CP025930|CRISPRCasFinder,CRT matches to NZ_CP027026 (Streptomyces sp. WAC00288 plasmid p4, complete sequence) position: , mismatch: 11, identity: 0.694

tccgcgccgcgaggtggagaccctgccggaggcgaa	CRISPR spacer
ggacagccgcgaggtggcgaccctgcgggagaaggt	Protospacer
     ************ ******** ****. *.

100. spacer 11.56|2210141|34|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to CP033569 (Acinetobacter pittii strain 2014N21-145 plasmid p2014N21-145-1, complete sequence) position: , mismatch: 11, identity: 0.676

accccatcttgcagagtatatgcgagcaaaattt	CRISPR spacer
ccgaattcttgcagagaatatgctagcaaaggcc	Protospacer
 *    ********** ****** ******. ..

101. spacer 11.56|2210141|34|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010358 (Acinetobacter johnsonii XBB1 plasmid pXBB1-8, complete sequence) position: , mismatch: 11, identity: 0.676

accccatcttgcagagtatatgcgagcaaaattt	CRISPR spacer
tcgagttcttgcagagaatatgctagcaaaggcc	Protospacer
 *    ********** ****** ******. ..

102. spacer 11.56|2210141|34|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029396 (Acinetobacter defluvii strain WCHA30 plasmid pOXA58_010030, complete sequence) position: , mismatch: 11, identity: 0.676

accccatcttgcagagtatatgcgagcaaaattt	CRISPR spacer
ccgaattcttgcagagaatatgctagcaaaggcc	Protospacer
 *    ********** ****** ******. ..

103. spacer 11.56|2210141|34|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010351 (Acinetobacter johnsonii XBB1 plasmid pXBB1-9, complete sequence) position: , mismatch: 11, identity: 0.676

accccatcttgcagagtatatgcgagcaaaattt	CRISPR spacer
ccgaattcttgcagagaatatgctagcaaaggcc	Protospacer
 *    ********** ****** ******. ..

104. spacer 11.56|2210141|34|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032285 (Acinetobacter sp. WCHA55 plasmid pOXA58_010055, complete sequence) position: , mismatch: 11, identity: 0.676

accccatcttgcagagtatatgcgagcaaaattt	CRISPR spacer
ccgaattcttgcagagaatatgctagcaaaggcc	Protospacer
 *    ********** ****** ******. ..

105. spacer 11.56|2210141|34|CP025930|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043309 (Acinetobacter johnsonii strain Acsw19 plasmid pAcsw19-2, complete sequence) position: , mismatch: 11, identity: 0.676

accccatcttgcagagtatatgcgagcaaaattt	CRISPR spacer
ccgaattcttgcagagaatatgctagcaaaggcc	Protospacer
 *    ********** ****** ******. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

417857 : 503071

Planktothrix_phage(18.18%)

tRNA,integrase,transposase,protease

attL 415603:415618|attR 463892:463907

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
415603:415618	attL	NA	NA	NA	NA
AUR49854.1\|417857_418784_-\|integrase	bacteriophage integrase	A0A0K2CP59	Brevibacillus_phage	3.7e-31	29.2
AUR50528.1\|418901_419327_+	3-dehydroquinate dehydratase	NA	NA	NA	NA
AUR50212.1\|419427_420078_+	O-methyltransferase	NA	NA	NA	NA
AUR50365.1\|420114_420663_+	thiol peroxidase	NA	NA	NA	NA
AUR50432.1\|420858_421350_-	guanine deaminase	S4VYZ2	Pandoravirus	9.1e-21	36.0
AUR49952.1\|421383_422247_-	RNA-associated protein	NA	NA	NA	NA
AUR49328.1\|422256_423675_-	pDZ signaling protein	NA	NA	NA	NA
AUR50444.1\|423707_424190_-	competence/damage-inducible protein	B5TK85	Pseudomonas_phage	2.7e-17	38.5
AUR49739.1\|424189_425215_-\|tRNA	tRNA N6-adenosine threonylcarbamoyltransferase	A0A0R6PI74	Moraxella_phage	2.5e-65	40.9
AUR50684.1\|425632_425887_-	30S ribosomal protein S20	NA	NA	NA	NA
AUR49082.1\|426563_428759_-	3'-to-5' exoribonuclease RNase R	Q0GXV6	Lactococcus_phage	4.7e-61	31.9
AUR49280.1\|428811_430323_-	hypothetical protein	NA	NA	NA	NA
AUR49168.1\|430356_432207_-	lipid A export ATP-binding/permease protein	W8CYL7	Bacillus_phage	3.3e-55	31.2
AUR49003.1\|432832_435613_+	outer membrane porin CarboxypepD_reg-like domain	NA	NA	NA	NA
AUR50222.1\|436684_437329_+	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AUR50554.1\|437365_437770_+	thiosulfate sulfurtransferase	NA	NA	NA	NA
AUR49057.1\|437858_440204_+	alpha-12-mannosidase	NA	NA	NA	NA
AUR49063.1\|440228_442532_+	alpha-12-mannosidase	NA	NA	NA	NA
AUR50604.1\|443078_443432_+	cell division protein stabilizes FtsL against RasP cleavage	NA	NA	NA	NA
AUR50596.1\|443452_443815_+	hypothetical protein	NA	NA	NA	NA
AUR49805.1\|443834_444809_+	ribosomal large subunit pseudouridine synthase D	NA	NA	NA	NA
AUR49114.1\|444845_446894_+	thiol:disulfide interchange protein	NA	NA	NA	NA
AUR50032.1\|446911_447697_+	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
AUR49137.1\|447754_449719_+	DNA gyrase subunit B	G3M9Z3	Bacillus_virus	2.3e-139	44.7
AUR49175.1\|449711_451520_+	Zn-dependent dipeptidase	NA	NA	NA	NA
AUR48962.1\|452501_456476_-	DEAD/DEAH box helicase	NA	NA	NA	NA
AUR49758.1\|456485_457499_-	type II DNA modification methyltransferase	NA	NA	NA	NA
AUR49638.1\|458558_459653_+	aminodeoxychorismate lyase	NA	NA	NA	NA
AUR50080.1\|459649_460399_+\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
AUR50202.1\|460395_461055_+	lipoprotein-releasing system ATP-binding	G9BWD6	Planktothrix_phage	1.1e-37	42.5
AUR50151.1\|461084_461789_+	DNA-binding protein	NA	NA	NA	NA
AUR50278.1\|461795_462398_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
AUR50462.1\|462880_463351_+	transcription elongation factor	NA	NA	NA	NA
AUR50566.1\|463366_463756_+	putative HIT-like protein	NA	NA	NA	NA
AUR50455.1\|464666_465143_-	lipoprotein	NA	NA	NA	NA
463892:463907	attR	NA	NA	NA	NA
AUR49461.1\|465139_466426_-	alpha-amylase	NA	NA	NA	NA
AUR49481.1\|466422_467685_-	glycosyltransferase	NA	NA	NA	NA
AUR49135.1\|467681_469658_-	4-alpha-glucanotransferase	NA	NA	NA	NA
AUR50155.1\|470144_470846_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.6e-25	31.2
AUR49302.1\|470880_472353_-	inner membrane protein unknown function	NA	NA	NA	NA
AUR49486.1\|472472_473729_-	phosphoglycerate kinase	NA	NA	NA	NA
AUR49235.1\|474024_475632_+	phosphoenolpyruvate carboxykinase [ATP]	A0A2H4PQN1	Staphylococcus_phage	6.6e-129	49.3
AUR50721.1\|475827_476040_-	hemagglutinin-related protein	NA	NA	NA	NA
AUR50597.1\|476039_476402_-	hemagglutinin-related protein	NA	NA	NA	NA
AUR49885.1\|482967_483870_-\|transposase	transposase in IS195	NA	NA	NA	NA
AUR49369.1\|484843_486211_-	outer membrane protein TolC Type I secretion system	NA	NA	NA	NA
AUR49625.1\|486207_487314_-	macrolide export protein	NA	NA	NA	NA
AUR49482.1\|487383_488646_-	macrolide export ATP-binding/permease	NA	NA	NA	NA
AUR49471.1\|488668_489943_-	macrolide export ATP-binding/permease	NA	NA	NA	NA
AUR50203.1\|489967_490627_-	putative ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-31	41.3
AUR50552.1\|490645_491053_-	hypothetical protein	NA	NA	NA	NA
AUR50397.1\|491538_492063_+	ECF RNA polymerase sigma factor	NA	NA	NA	NA
AUR50564.1\|492059_492452_+	inner membrane protein unknown function	NA	NA	NA	NA
AUR49886.1\|492788_493691_-\|transposase	transposase in IS195	NA	NA	NA	NA
AUR49887.1\|493844_494747_-\|transposase	transposase in IS195	NA	NA	NA	NA
AUR49089.1\|495482_497630_-	methylmalonyl-CoA mutase large subunit	NA	NA	NA	NA
AUR49165.1\|497658_499515_-	methylmalonyl-CoA mutase	NA	NA	NA	NA
AUR49267.1\|499761_501288_+\|protease	t9SS C-terminal target domain-containing protease	NA	NA	NA	NA
AUR49888.1\|502168_503071_+\|transposase	transposase in IS195	NA	NA	NA	NA

DBSCAN-SWA_2

592589 : 660860

Ralstonia_phage(30.77%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR49268.1\|592589_594113_+\|tRNA	glutamyl-tRNA synthetase	NA	NA	NA	NA
AUR49501.1\|594137_595376_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
AUR49139.1\|595460_597416_+	lipoteichoic acid synthase	NA	NA	NA	NA
AUR49947.1\|597530_598400_+	glucose-1-phosphate thymidylyltransferase 2	I7I009	Enterobacteria_phage	3.1e-104	63.2
AUR50301.1\|598414_599005_+	dTDP-4-dehydrorhamnose epimerase	I7HJC4	Enterobacteria_phage	9.2e-44	52.8
AUR49961.1\|599001_599859_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.6e-36	36.8
AUR49697.1\|599865_600930_+	dTDP-glucose dehydratase	A0A1D8EQC0	Escherichia_phage	7.3e-84	48.6
AUR49643.1\|601004_602093_+	aminomethyltransferase glycine cleavage system T	NA	NA	NA	NA
AUR50629.1\|603056_603383_-	hypothetical protein	NA	NA	NA	NA
AUR50327.1\|603388_603967_-	motA/TolQ/ExbB proton channel	NA	NA	NA	NA
AUR50183.1\|604036_604714_-	hypothetical protein	NA	NA	NA	NA
AUR48959.1\|604710_609120_-	cobN/magnesium chelatase	NA	NA	NA	NA
AUR49144.1\|609156_611097_-	outer membrane receptor for ferrienterochelin and colicin	A0A0P0I887	Acinetobacter_phage	8.3e-09	28.2
AUR50213.1\|611111_611762_-	heme-binding protein	NA	NA	NA	NA
AUR49037.1\|612614_615137_-\|protease	thiol protease/hemagglutinin	NA	NA	NA	NA
AUR50610.1\|615363_615717_-	hypothetical protein	NA	NA	NA	NA
AUR50330.1\|615902_616478_-	superoxide dismutase [Mn/Fe]	Q56AR7	Bacillus_thuringiensis_phage	4.6e-40	40.2
AUR50055.1\|616615_617386_-	response to hydroperoxyde protein	NA	NA	NA	NA
AUR50533.1\|617470_617890_-	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA
AUR49519.1\|617945_619166_-	collagenase precursor	Q6DW11	Phage_TP	4.4e-16	24.8
AUR50505.1\|619202_619646_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	NA	NA	NA	NA
AUR49709.1\|619648_620701_-\|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
AUR50046.1\|620718_621495_-\|tRNA	tRNA pseudouridine synthase B	NA	NA	NA	NA
AUR49982.1\|621504_622347_-	undecaprenyl-diphosphatase	NA	NA	NA	NA
AUR50706.1\|622454_622682_-	inner membrane	NA	NA	NA	NA
AUR49924.1\|622728_623616_-	cell division FtsX-related transmembrane transport protein	NA	NA	NA	NA
AUR50617.1\|625229_625571_+	transcriptional regulator	NA	NA	NA	NA
AUR49653.1\|627786_628872_+\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	1.3e-19	27.1
AUR50709.1\|628970_629192_-	conjugative transposon protein TraN	NA	NA	NA	NA
AUR49806.1\|629345_630320_+	conjugative transposon protein TraM	NA	NA	NA	NA
AUR48951.1\|630407_636020_+	reticulocyte binding protein 2 like	NA	NA	NA	NA
AUR49295.1\|636205_637690_+	hypothetical protein	NA	NA	NA	NA
AUR49108.1\|637785_639867_+	DNA topoisomerase III	A0A076FM50	Aureococcus_anophage	5.0e-20	25.1
AUR49227.1\|640008_641649_+	hypothetical protein	NA	NA	NA	NA
AUR50664.1\|641632_641911_-	DNA-binding helix-turn-helix regulator	NA	NA	NA	NA
AUR49509.1\|641923_643159_-	ATPase	NA	NA	NA	NA
AUR49889.1\|643285_644188_+\|transposase	transposase in IS195	NA	NA	NA	NA
AUR50640.1\|644226_644541_+	fusion protein	NA	NA	NA	NA
AUR49654.1\|644624_645710_+\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	5.8e-20	27.4
AUR50688.1\|646404_646659_+	hypothetical protein	NA	NA	NA	NA
AUR50710.1\|646663_646885_+	putative synthetase/amidase	NA	NA	NA	NA
AUR49703.1\|647101_648160_+	cell filamentation protein	D7RWK9	Brochothrix_phage	1.6e-06	28.5
AUR49356.1\|648190_649573_-	glycosaminoglycan attachment site	NA	NA	NA	NA
AUR50511.1\|649692_650130_-	conjugative transposon protein TraQ	NA	NA	NA	NA
AUR50312.1\|650149_650734_-	conjugative transposon protein TraO	NA	NA	NA	NA
AUR49843.1\|650738_651674_-	conjugative transposon protein TraN	NA	NA	NA	NA
AUR49377.1\|651747_653109_-	conjugative transposon protein TraM	NA	NA	NA	NA
AUR50679.1\|653105_653369_-	hypothetical protein	NA	NA	NA	NA
AUR50254.1\|653372_653996_-	conjugative transposon protein TraK	NA	NA	NA	NA
AUR49796.1\|654013_655000_-	conjugative transposon protein TraJ	NA	NA	NA	NA
AUR50255.1\|655020_655644_-	conjugative transposon protein TraI	NA	NA	NA	NA
AUR50465.1\|655695_656163_-	conjugative transposon protein TraG	NA	NA	NA	NA
AUR50534.1\|656240_656660_-	group II intron-encoded protein retron-type RNA-directed DNA polymerase	NA	NA	NA	NA
AUR49655.1\|656823_657909_+\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	5.8e-20	27.4
AUR50445.1\|659044_659527_+	non-heme ferritin	NA	NA	NA	NA
AUR49656.1\|659774_660860_-\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	3.8e-19	27.8

DBSCAN-SWA_3

893730 : 973770

Ralstonia_phage(18.18%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR50129.1\|893730_894447_-\|tRNA	phenylalanine--tRNA ligase beta subunit	NA	NA	NA	NA
AUR49556.1\|894427_895612_-	GTPase Obg	NA	NA	NA	NA
AUR50314.1\|895621_896206_-	adenylate kinase	NA	NA	NA	NA
AUR50387.1\|896206_896743_-	hypoxanthine phosphoribosyltransferase	NA	NA	NA	NA
AUR49129.1\|897336_899334_+	fructose-16-bisphosphatase	NA	NA	NA	NA
AUR49055.1\|899489_901844_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA
AUR50138.1\|901891_902602_+	ftsH-interacting integral membrane protein	NA	NA	NA	NA
AUR49005.1\|902766_905544_-\|tRNA	leucyl-tRNA synthetase	A0A2H4PQS0	Staphylococcus_phage	8.0e-207	43.3
AUR49248.1\|907080_908640_-	NAD-utilizing dehydrogenase	NA	NA	NA	NA
AUR49315.1\|908624_910076_-\|tRNA	tRNA nucleotidyltransferase	A0A2I2MPB1	Mycobacterium_phage	1.2e-31	28.8
AUR49393.1\|910715_912065_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	8.3e-32	26.5
AUR50022.1\|912069_912861_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
AUR49529.1\|912898_914110_-	flavodoxin	NA	NA	NA	NA
AUR49969.1\|914140_914992_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
AUR49883.1\|915028_915934_-	meso-diaminopimelate D-dehydrogenase	NA	NA	NA	NA
AUR49717.1\|915971_917018_-	transcription termination protein	NA	NA	NA	NA
AUR48948.1\|917702_925202_-	gliding motility protein	NA	NA	NA	NA
AUR50271.1\|925241_925850_-	holliday junction ATP-dependent DNA helicase	NA	NA	NA	NA
AUR49659.1\|926293_927379_-\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	2.2e-19	27.8
AUR49014.1\|927933_930609_-	outer membrane porin CarboxypepD_reg-like domain	NA	NA	NA	NA
AUR50132.1\|930625_931342_-	hypothetical protein	NA	NA	NA	NA
AUR49626.1\|931928_933035_-\|transposase	transposase in ISPg2	NA	NA	NA	NA
AUR50728.1\|933143_933338_+	exodeoxyribonuclease 7 small subunit	NA	NA	NA	NA
AUR50192.1\|933334_934003_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
AUR49660.1\|934788_935874_-\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	4.9e-19	27.8
AUR50389.1\|936097_936631_+	DNA-binding protein	NA	NA	NA	NA
AUR50479.1\|936657_937116_+	hypothetical protein	NA	NA	NA	NA
AUR50599.1\|937473_937833_+	hypothetical protein	NA	NA	NA	NA
AUR50403.1\|937839_938361_+	hypothetical protein	NA	NA	NA	NA
AUR50707.1\|938373_938601_+	5-hydroxytryptamine receptor 2	NA	NA	NA	NA
AUR50661.1\|938623_938905_+	hypothetical protein	NA	NA	NA	NA
AUR50651.1\|938917_939220_+	hypothetical protein	NA	NA	NA	NA
AUR49462.1\|939941_941228_-	internalin-J	NA	NA	NA	NA
AUR49516.1\|942407_943631_-	adenine DNA glycosylase	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	3.0e-25	31.6
AUR49841.1\|943680_944619_+	ABC transporter Periplasmic binding protein-like II	NA	NA	NA	NA
AUR50158.1\|944670_945369_+	aliphatic sulfonates import ATP-binding protein	G3M9Y6	Bacillus_virus	3.4e-29	32.0
AUR50081.1\|945365_946115_+	aliphatic sulfonates transport permease	NA	NA	NA	NA
AUR49715.1\|946164_947214_+	phosphate-selective porin O	NA	NA	NA	NA
AUR50230.1\|947412_948051_+	lysE type translocator	NA	NA	NA	NA
AUR49008.1\|948127_950869_-	DNA/RNA helicase	NA	NA	NA	NA
AUR49215.1\|950861_952529_-	type III restriction-modification system methylation subunit	A0A220NUF4	Escherichia_phage	9.8e-75	39.8
AUR49891.1\|952692_953595_+\|transposase	transposase in IS195	NA	NA	NA	NA
AUR49274.1\|953755_955273_+	phosphoribosylaminoimidazolecarboxamide formyltransferase	Q58MG4	Prochlorococcus_phage	5.1e-54	41.6
AUR49748.1\|955375_956395_+	rod shape-determining protein	NA	NA	NA	NA
AUR49925.1\|956432_957320_+	cell shape-determining protein	NA	NA	NA	NA
AUR50404.1\|957319_957838_+	rod shape-determining protein	NA	NA	NA	NA
AUR49161.1\|957830_959696_+	penicillin-binding protein 2	NA	NA	NA	NA
AUR49309.1\|959685_961143_+	rod shape-determining protein	NA	NA	NA	NA
AUR49530.1\|961170_962382_-	hypothetical protein	NA	NA	NA	NA
AUR50480.1\|962613_963072_+	Nucleoid-associated protein	NA	NA	NA	NA
AUR50143.1\|963136_963847_+	hypothetical protein	NA	NA	NA	NA
AUR49859.1\|963883_964810_+	outer membrane hypothetical protein	NA	NA	NA	NA
AUR49026.1\|964993_967573_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	1.9e-109	33.8
AUR49537.1\|967606_968809_+\|protease	Beta-barrel assembly-enhancing protease	NA	NA	NA	NA
AUR48995.1\|969400_972298_+	RNA polymerase-associated protein	A0A2H4J643	uncultured_Caudovirales_phage	1.4e-214	43.8
AUR50495.1\|972329_972782_+	hypothetical protein	NA	NA	NA	NA
AUR49892.1\|972867_973770_-\|transposase	transposase in IS195	NA	NA	NA	NA

DBSCAN-SWA_4

977923 : 1052198

Streptococcus_virus(10.0%)

transposase,integrase,protease

attL 972855:972914|attR 1066091:1067160

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
972855:972914	attL	NA	NA	NA	NA
AUR50130.1\|977923_978640_-\|protease	rhomboid protease membrane protein of glp regulon	NA	NA	NA	NA
AUR48999.1\|978666_981522_-	LPS-assembly organic solvent tolerance protein	NA	NA	NA	NA
AUR50094.1\|981994_982738_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AUR49816.1\|982793_983759_+	cadmium cobalt and zinc/H(+)-K(+) antiporter	NA	NA	NA	NA
AUR50405.1\|983755_984274_-	putative Met_synt_B12 super family	NA	NA	NA	NA
AUR49209.1\|984363_986043_-	aspartate/alanine antiporter cobalt transporter	NA	NA	NA	NA
AUR49021.1\|987959_990563_+	ferric enterobactin receptor	NA	NA	NA	NA
AUR49834.1\|990995_991937_+	nitronate monooxygenase	NA	NA	NA	NA
AUR50703.1\|991933_992164_+	putative Cys_rich_CWC	NA	NA	NA	NA
AUR49224.1\|992232_993879_+	fumarate hydratase	NA	NA	NA	NA
AUR49176.1\|994001_995810_+	DNA polymerase III subunit tau	A0A1U9WR94	Streptococcus_virus	6.1e-46	39.1
AUR50740.1\|996246_996417_-	ferredoxin	NA	NA	NA	NA
AUR49286.1\|996752_998255_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
AUR49214.1\|998497_1000168_-	peptidylarginine deiminase	NA	NA	NA	NA
AUR49035.1\|1001383_1003915_-\|protease	thiol protease hemagglutinin precursor	NA	NA	NA	NA
AUR50438.1\|1004054_1004540_-	67-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	9.9e-28	42.9
AUR50171.1\|1004631_1005318_-	tetratricopeptide repeat-containing protein	NA	NA	NA	NA
AUR50176.1\|1005503_1006187_-	response regulator protein	NA	NA	NA	NA
AUR49162.1\|1006199_1008062_-	two-component sensor histidine kinase	NA	NA	NA	NA
AUR50017.1\|1009011_1009809_-	dihydroorotate dehydrogenase electron transfer subunit	NA	NA	NA	NA
AUR50508.1\|1009860_1010301_-	transcriptional regulator	NA	NA	NA	NA
AUR49893.1\|1011472_1012375_-\|transposase	transposase in IS195	NA	NA	NA	NA
AUR49570.1\|1012572_1013745_-	hypothetical protein	NA	NA	NA	NA
AUR50215.1\|1013759_1014410_-	ribonuclease H	NA	NA	NA	NA
AUR49760.1\|1014437_1015451_-\|protease	Beta-barrel assembly-enhancing protease	NA	NA	NA	NA
AUR50379.1\|1015463_1016003_-	acetyltransferase	NA	NA	NA	NA
AUR49183.1\|1016011_1017799_-	xaa-Pro aminopeptidase metallopeptidase family M24	A0A0P0I8D7	Acinetobacter_phage	2.5e-129	40.7
AUR49258.1\|1017847_1019395_-	ribosylnicotinamide kinase	NA	NA	NA	NA
AUR49148.1\|1019977_1021900_+	chaperone	A0A0N9QXN8	Chrysochromulina_ericina_virus	5.9e-140	48.8
AUR50360.1\|1022110_1022665_+	DNA-binding helix-turn-helix regulator	NA	NA	NA	NA
AUR49483.1\|1022677_1023940_+\|integrase	bacteriophage integrase	H7BUI8	unidentified_phage	2.2e-10	26.2
AUR50400.1\|1023960_1024482_+	mobilizable transposon	NA	NA	NA	NA
AUR49661.1\|1024585_1025671_+\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	9.9e-20	28.1
AUR50225.1\|1026148_1026793_-	hypothetical protein	NA	NA	NA	NA
AUR49532.1\|1027662_1028868_+	virulence-associated protein putative P-loop ATPase	D3W0G0	Lactococcus_phage	4.1e-14	27.8
AUR49919.1\|1029095_1029986_+	DNA primase	NA	NA	NA	NA
AUR50595.1\|1030115_1030478_+	mobilization protein	NA	NA	NA	NA
AUR49835.1\|1030467_1031409_+	relaxase/mobilization protein	NA	NA	NA	NA
AUR50124.1\|1031434_1032157_+	inner membrane protein unknown function	NA	NA	NA	NA
AUR50718.1\|1032274_1032490_+	transcriptional regulator	NA	NA	NA	NA
AUR49531.1\|1032561_1033770_+	sirtuin	NA	NA	NA	NA
AUR49152.1\|1033759_1035661_+	bipolar DNA helicase	NA	NA	NA	NA
AUR49718.1\|1035856_1036903_+	exonuclease sbcC	NA	NA	NA	NA
AUR50042.1\|1036958_1037738_+	transcriptional regulator	NA	NA	NA	NA
AUR50500.1\|1037734_1038181_+	ATP-dependent DNA helicase	NA	NA	NA	NA
AUR50484.1\|1038295_1038751_+	putative N-acetyltransferase	E9LUK4	Lactobacillus_phage	2.7e-19	38.4
AUR49310.1\|1038804_1040262_+	ATP-dependent DNA helicase	NA	NA	NA	NA
AUR49894.1\|1040415_1041318_+\|transposase	transposase in IS195	NA	NA	NA	NA
AUR49158.1\|1041563_1043444_+	ATPase involved in DNA repair	NA	NA	NA	NA
AUR49826.1\|1043684_1044638_+	glycerate dehydrogenase	M1NSB9	Streptococcus_phage	2.1e-21	27.4
AUR49594.1\|1045024_1046173_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
AUR49350.1\|1047383_1048775_+	GDSL-like lipase/acylhydrolase inner membrane lipoprotein	NA	NA	NA	NA
AUR50014.1\|1048779_1049586_+	lysophospholipase L1-like esterase	NA	NA	NA	NA
AUR49266.1\|1049606_1051142_+	peptidoglycan O-acetyltransferase	A0A125RNP0	Pseudomonas_phage	1.2e-63	36.5
AUR49895.1\|1051295_1052198_-\|transposase	transposase in IS195	NA	NA	NA	NA
1066091:1067160	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1180062 : 1241660

Prochlorococcus_phage(20.0%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR49899.1\|1180062_1180965_-\|transposase	transposase in IS195	NA	NA	NA	NA
AUR49871.1\|1181450_1182362_+	gliding motility-associated lipoprotein	NA	NA	NA	NA
AUR49250.1\|1182393_1183950_+\|tRNA	tRNA modification GTPase	NA	NA	NA	NA
AUR49900.1\|1184664_1185567_-\|transposase	transposase in IS195	NA	NA	NA	NA
AUR49901.1\|1185720_1186623_-\|transposase	transposase in IS195	NA	NA	NA	NA
AUR49902.1\|1187030_1187933_+\|transposase	transposase in IS195	NA	NA	NA	NA
AUR49640.1\|1187978_1189073_-	hypothetical protein	NA	NA	NA	NA
AUR50422.1\|1189069_1189573_-	thioredoxin reductase	NA	NA	NA	NA
AUR49766.1\|1189569_1190580_-	UDP-N-acetyl-2-amino-2-deoxy-D-glucuronate oxidase	NA	NA	NA	NA
AUR49761.1\|1190546_1191560_-	uridylate kinase/aspartokinase (Amino Acid Kinases (AAK) superfamily)	NA	NA	NA	NA
AUR49755.1\|1191549_1192566_-	Fe-S oxidoreductase	NA	NA	NA	NA
AUR49955.1\|1192546_1193407_-	methylthioribose kinase	NA	NA	NA	NA
AUR49849.1\|1193403_1194333_-	glycosyl transferase	NA	NA	NA	NA
AUR49595.1\|1194340_1195489_-	L-glutamine:2-deoxy-scyllo-inosose aminotransferase	NA	NA	NA	NA
AUR49367.1\|1195470_1196841_-	transcriptional antiterminator	NA	NA	NA	NA
AUR48972.1\|1197377_1200770_-	putative helicase	A0A223W0B5	Agrobacterium_phage	3.8e-94	31.2
AUR49663.1\|1200869_1201955_-\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	3.4e-20	27.4
AUR49636.1\|1202235_1203333_+	GDP-mannose 46-dehydratase	A0A0E3G468	Synechococcus_phage	2.3e-125	65.3
AUR49691.1\|1203325_1204399_+	GDP-L-fucose synthetase	D1LW79	Prochlorococcus_phage	2.9e-80	42.5
AUR49749.1\|1204537_1205557_+	branched-chain-amino-acid aminotransferase	NA	NA	NA	NA
AUR49199.1\|1205685_1207407_-	phospholipase D/nuclease	NA	NA	NA	NA
AUR49034.1\|1208372_1210907_+	ferrous iron transport protein B	NA	NA	NA	NA
AUR50733.1\|1210926_1211112_+	virus attachment protein p12	NA	NA	NA	NA
AUR50488.1\|1211119_1211575_+	PH domain-containing protein	NA	NA	NA	NA
AUR49179.1\|1212152_1213952_+	30S ribosomal protein S1	NA	NA	NA	NA
AUR50380.1\|1214803_1215343_-	S-adenosyl-L-methionine-dependent methyltransferase	NA	NA	NA	NA
AUR50006.1\|1215379_1216195_-	hypothetical protein	NA	NA	NA	NA
AUR50239.1\|1216212_1216845_-	hypothetical protein	NA	NA	NA	NA
AUR49333.1\|1216976_1218392_+	ATP-dependent helicase	G0YQF1	Erwinia_phage	1.3e-11	23.1
AUR49419.1\|1218408_1219740_-	hypothetical protein	NA	NA	NA	NA
AUR48997.1\|1219945_1222813_-	glycine dehydrogenase (glycine cleavage system P protein)	E3SN07	Prochlorococcus_phage	5.3e-246	48.1
AUR50223.1\|1222816_1223461_-	metallo-hydrolase	NA	NA	NA	NA
AUR50185.1\|1223457_1224132_-	16S rRNA methyltransferase glucose-inhibited division protein B	NA	NA	NA	NA
AUR50005.1\|1224157_1224973_-	hypothetical protein	NA	NA	NA	NA
AUR50199.1\|1225407_1226070_+	queuosine biosynthesis ATPase	A0A2P1JXV3	Rhodococcus_phage	2.2e-46	46.6
AUR50427.1\|1226104_1226599_+	phosphoesterase	NA	NA	NA	NA
AUR49605.1\|1226609_1227740_+	capsule biosynthesis	A0A0N9SJ77	Staphylococcus_phage	6.3e-33	33.0
AUR49219.1\|1228909_1230568_+	dipeptidase A	NA	NA	NA	NA
AUR49627.1\|1230940_1232047_-	chorismate synthase	A0A291AU41	Pandoravirus	5.1e-88	50.0
AUR50333.1\|1232196_1232769_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
AUR50419.1\|1232819_1233326_-	LTXXQ motif family protein inner membrane protein	NA	NA	NA	NA
AUR50550.1\|1233322_1233733_-	hypothetical protein	NA	NA	NA	NA
AUR50342.1\|1233780_1234347_-	ECF RNA polymerase sigma factor	NA	NA	NA	NA
AUR49216.1\|1236238_1237906_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
AUR49416.1\|1238062_1239397_+	phosphate starvation-inducible protein	A0A2I7SAD7	Vibrio_phage	2.8e-48	33.6
AUR50337.1\|1239444_1240014_-	crossover junction endodeoxyribonuclease	NA	NA	NA	NA
AUR50644.1\|1240021_1240330_-	hypothetical protein	NA	NA	NA	NA
AUR49623.1\|1240550_1241660_+\|protease	lys-gingipain protease	NA	NA	NA	NA

DBSCAN-SWA_6

1245968 : 1310676

Ralstonia_phage(44.44%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR49664.1\|1245968_1247054_+\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	3.8e-19	27.8
AUR50536.1\|1247583_1248003_+	large-conductance mechanosensitive channel	NA	NA	NA	NA
AUR49580.1\|1248380_1249538_+	NAD(P) transhydrogenase subunit alpha part 1	NA	NA	NA	NA
AUR50639.1\|1249647_1249962_+	NAD(P) transhydrogenase subunit alpha	NA	NA	NA	NA
AUR49033.1\|1249958_1252496_+	NAD(P) transhydrogenase subunit beta	NA	NA	NA	NA
AUR49542.1\|1252641_1253841_-	hypothetical protein	NA	NA	NA	NA
AUR49801.1\|1253837_1254818_-\|protease	modulator of FtsH protease	NA	NA	NA	NA
AUR50471.1\|1254844_1255309_-\|protease	membrane protein putative activity regulator of membrane protease nfeD	NA	NA	NA	NA
AUR50529.1\|1256317_1256743_+	SOS-response transcriptional repressor	A0A2H4J538	uncultured_Caudovirales_phage	9.9e-24	39.9
AUR49379.1\|1256750_1258112_+	DNA polymerase IV	A0A218MNF2	uncultured_virus	8.8e-74	36.3
AUR49254.1\|1258120_1259671_-	L-lactate transport	NA	NA	NA	NA
AUR50464.1\|1259986_1260457_+	UDP-N-acetylenolpyruvoylglucosamine reductase inner membrane lipoprotein	NA	NA	NA	NA
AUR49756.1\|1260456_1261473_+	UDP-N-acetylenolpyruvoylglucosamine reductase	NA	NA	NA	NA
AUR49297.1\|1261499_1262978_+	Octanoyltransferase	NA	NA	NA	NA
AUR49665.1\|1263306_1264392_-\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	5.8e-20	28.1
AUR49615.1\|1264806_1265928_+	putative teichuronic acid biosynthesis glycosyltransferase	NA	NA	NA	NA
AUR49476.1\|1265924_1267196_+	D-inositol 3-phosphate glycosyltransferase	NA	NA	NA	NA
AUR50469.1\|1267332_1267797_+	NADPH-dependent 7-cyano-7-deazaguanine reductase	E7DN65	Pneumococcus_phage	1.3e-45	68.2
AUR49932.1\|1267824_1268706_+	putative lipid kinase	NA	NA	NA	NA
AUR50436.1\|1269093_1269582_-	hypothetical protein	NA	NA	NA	NA
AUR50545.1\|1269592_1270006_-	polyketide cyclase / dehydrase and lipid transport	NA	NA	NA	NA
AUR50237.1\|1270056_1270689_-	Orotate phosphoribosyltransferase	Q58MW1	Prochlorococcus_phage	5.3e-05	27.4
AUR49995.1\|1270799_1271621_-	carbon-nitrogen hydrolase	NA	NA	NA	NA
AUR50366.1\|1271617_1272166_-	hemolysin A 1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AUR50530.1\|1272216_1272642_-	hypothetical protein	NA	NA	NA	NA
AUR50179.1\|1273508_1274189_-	ribosomal N-acetyltransferase	NA	NA	NA	NA
AUR49882.1\|1274499_1275408_-	hypothetical protein	NA	NA	NA	NA
AUR49449.1\|1275473_1276769_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
AUR49081.1\|1276765_1278964_-	prolyl tripeptidyl peptidase	NA	NA	NA	NA
AUR49314.1\|1278995_1280450_-	ribosomal RNA large subunit methyltransferase K/L	NA	NA	NA	NA
AUR49581.1\|1281068_1282226_-	1-deoxy-D-xylulose 5-phosphate reductoisomerase	NA	NA	NA	NA
AUR50394.1\|1282222_1282750_-	ribosome maturation factor	NA	NA	NA	NA
AUR49436.1\|1282756_1284061_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
AUR50283.1\|1284091_1284694_-	hypothetical protein	NA	NA	NA	NA
AUR49406.1\|1284713_1286051_-	glucose-6-phosphate isomerase B	NA	NA	NA	NA
AUR49778.1\|1286083_1287088_-	glycerol-3-phosphate dehydrogenase [NAD(P) ]	NA	NA	NA	NA
AUR49195.1\|1287173_1288910_-\|tRNA	lysine--tRNA ligase	A0A1V0SIS0	Klosneuvirus	7.7e-91	37.6
AUR49936.1\|1289032_1289911_-	uridine phosphorylase	NA	NA	NA	NA
AUR49329.1\|1289981_1291400_-	tetratricopeptide repeat-containing protein	NA	NA	NA	NA
AUR49682.1\|1291609_1292692_+\|transposase	transposase in ISPg2	NA	NA	NA	NA
AUR49666.1\|1292809_1293895_-\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	7.6e-20	28.1
AUR50224.1\|1294643_1295288_+	butyrate--acetoacetate CoA-transferase subunit A	NA	NA	NA	NA
AUR50568.1\|1295341_1295731_+	3-aminobutyryl-CoA ammonia lyase	NA	NA	NA	NA
AUR49996.1\|1295757_1296579_+	3-keto-5-aminohexanoate cleavage enzyme	NA	NA	NA	NA
AUR49721.1\|1296620_1297664_+	L-erythro-35-diaminohexanoate dehydrogenase	NA	NA	NA	NA
AUR49493.1\|1297750_1299001_+	lysine-23-aminomutase	NA	NA	NA	NA
AUR49687.1\|1299027_1300107_+	hypothetical protein	NA	NA	NA	NA
AUR49349.1\|1300106_1301498_+	DNA mismatch repair	NA	NA	NA	NA
AUR49245.1\|1301525_1303097_+	D-lysine 56-aminomutase alpha subunit	NA	NA	NA	NA
AUR50024.1\|1303093_1303885_+	D-lysine 56-aminomutase beta subunit	NA	NA	NA	NA
AUR50200.1\|1303907_1304570_+	butyrate--acetoacetate CoA-transferase subunit B	NA	NA	NA	NA
AUR49601.1\|1304615_1305755_+	butyryl-CoA dehydrogenase	NA	NA	NA	NA
AUR50033.1\|1305769_1306555_+	electron transfer flavoprotein beta subunit	NA	NA	NA	NA
AUR49774.1\|1306568_1307576_+	electron transfer flavoprotein alpha subunit	NA	NA	NA	NA
AUR50056.1\|1307679_1308450_+	short-chain-enoyl-CoA hydratase	NA	NA	NA	NA
AUR49977.1\|1308496_1309342_+	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
AUR49667.1\|1309590_1310676_+\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	2.2e-19	27.8

DBSCAN-SWA_7

1553577 : 1635473

Ralstonia_phage(35.71%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR50177.1\|1553577_1554261_-\|tRNA	tRNA pseudouridine synthase C	NA	NA	NA	NA
AUR50092.1\|1554304_1555051_-	3-oxoacyl-[acyl-carrier-protein] reductase	Q06VL0	Trichoplusia_ni_ascovirus	3.2e-17	31.2
AUR50234.1\|1555134_1555770_-	transcriptional repressor	NA	NA	NA	NA
AUR49184.1\|1556345_1558133_+	elongation factor 4	A0A2K9L6L3	Tupanvirus	3.1e-26	45.5
AUR49241.1\|1558167_1559754_+	replicative DNA helicase	A0A0F7L6J1	uncultured_marine_virus	3.2e-91	43.7
AUR49018.1\|1561199_1563830_+\|tRNA	alanine--tRNA ligase	A0A2K9L1X7	Tupanvirus	2.7e-95	41.7
AUR49779.1\|1563901_1564906_+	3-dehydroquinate synthase	NA	NA	NA	NA
AUR50116.1\|1565150_1565882_-	DNA alkylation repair enzyme	NA	NA	NA	NA
AUR50034.1\|1565896_1566682_-	hemolysin A 1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AUR50676.1\|1566687_1566954_+	membrane protein involved in tellurium resistance	NA	NA	NA	NA
AUR49507.1\|1567734_1568970_-	lipoprotein-releasing system	NA	NA	NA	NA
AUR49126.1\|1568982_1570992_-	DNA ligase	A0A0A8J9A9	Ralstonia_phage	3.7e-105	35.9
AUR50395.1\|1570979_1571507_-	ribosomal N-acetyltransferase	NA	NA	NA	NA
AUR50257.1\|1571513_1572137_-	recombination protein	NA	NA	NA	NA
AUR49276.1\|1572133_1573648_-	ribonuclease G	NA	NA	NA	NA
AUR50665.1\|1573968_1574247_-	Nucleoid-associated protein	NA	NA	NA	NA
AUR49634.1\|1574358_1575459_-\|transposase	transposase in ISPg2	NA	NA	NA	NA
AUR50482.1\|1575640_1576096_-	anaerobic ribonucleoside-triphosphate reductase-activating protein	A0A1W5P0X3	Cronobacter_phage	3.0e-26	42.7
AUR49052.1\|1576164_1578561_-	anaerobic ribonucleoside-triphosphate reductase	A0A0A8WEK0	Clostridium_phage	3.1e-183	44.0
AUR49670.1\|1579489_1580575_+\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	3.8e-19	27.8
AUR49230.1\|1587063_1588695_-	delta-1-pyrroline-5-carboxylate dehydrogenase	NA	NA	NA	NA
AUR49851.1\|1588771_1589701_-	peptidylarginine deiminase	NA	NA	NA	NA
AUR49512.1\|1589707_1590937_-	ornithine aminotransferase	NA	NA	NA	NA
AUR50344.1\|1591386_1591953_+	elongation factor P	NA	NA	NA	NA
AUR50417.1\|1592488_1592995_+	Nucleoid-associated protein	NA	NA	NA	NA
AUR49212.1\|1593136_1594813_-	aspartate/alanine antiporter cobalt transporter	NA	NA	NA	NA
AUR49386.1\|1595029_1596385_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
AUR49473.1\|1596459_1597734_+	5-methylthioadenosine/S-adenosylhomocysteine deaminase	NA	NA	NA	NA
AUR49998.1\|1597753_1598575_+	purine nucleoside phosphorylase 1	Q5YBA4	Grouper_iridovirus	7.5e-52	41.2
AUR50371.1\|1599106_1599652_-	hypothetical protein	NA	NA	NA	NA
AUR50407.1\|1600501_1601020_+	Nucleoid-associated protein	NA	NA	NA	NA
AUR49001.1\|1601545_1604368_+	lysyl endopeptidase	NA	NA	NA	NA
AUR48967.1\|1605662_1609244_-	pyruvate synthase pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
AUR49560.1\|1609432_1610614_-	ATPase component of energizing module of biotin ECF transporter	NA	NA	NA	NA
AUR49671.1\|1611070_1612156_+\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	3.8e-19	27.8
AUR49815.1\|1614187_1615156_+	modification methylase EcoRI	A0A1B0XVT8	Campylobacter_phage	1.2e-35	40.2
AUR49904.1\|1615836_1616739_-\|transposase	transposase in IS195	NA	NA	NA	NA
AUR50659.1\|1616968_1617256_-	hypothetical protein	NA	NA	NA	NA
AUR48983.1\|1617252_1620402_-	multidrug resistance protein	S5VTK5	Leptospira_phage	2.3e-101	26.0
AUR49699.1\|1620398_1621460_-	multidrug resistance protein	NA	NA	NA	NA
AUR49352.1\|1621495_1622884_-	outer membrane protein TolC Type I secretion system	NA	NA	NA	NA
AUR49672.1\|1623651_1624737_-\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	6.4e-19	27.8
AUR49308.1\|1625102_1626563_-	aminoacyl-histidine dipeptidase	NA	NA	NA	NA
AUR50719.1\|1626643_1626859_+	putative periplasmic	NA	NA	NA	NA
AUR50260.1\|1626891_1627512_+	outer membrane protein	NA	NA	NA	NA
AUR49043.1\|1627692_1630176_-	tonB-dependent receptor putative ferric aerobactin receptor	NA	NA	NA	NA
AUR49973.1\|1631373_1632222_+	vancomycin B-type resistance protein	NA	NA	NA	NA
AUR49143.1\|1632331_1634275_+	glutamine-dependent NAD(+) synthetase	NA	NA	NA	NA
AUR49673.1\|1634387_1635473_+\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	3.8e-19	27.8

DBSCAN-SWA_8

2126302 : 2172383

Bacillus_phage(33.33%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR49204.1\|2126302_2128003_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	2.0e-168	54.1
AUR50219.1\|2128030_2128678_+	inner membrane SNARE-like domain protein	NA	NA	NA	NA
AUR49846.1\|2128740_2129676_+	transporter YitT family	NA	NA	NA	NA
AUR49753.1\|2129679_2130699_+	N-acetyl-alpha-D-glucosaminyl-diphospho- ditransoctacis-undecaprenol 4-epimerase	NA	NA	NA	NA
AUR49451.1\|2131419_2132715_-	succinyl-CoA:coenzyme A transferase	NA	NA	NA	NA
AUR50731.1\|2133421_2133610_-	50S ribosomal protein L33	NA	NA	NA	NA
AUR50696.1\|2133629_2133869_-	50S ribosomal protein L28	NA	NA	NA	NA
AUR49072.1\|2134091_2136359_-	putative low-affinity inorganic phosphate transporter	NA	NA	NA	NA
AUR50251.1\|2136555_2137182_-	Nucleoid-associated protein	NA	NA	NA	NA
AUR50331.1\|2137593_2138169_+	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	1.9e-09	27.8
AUR49339.1\|2138165_2139572_+	undecaprenyl-phosphate N-acetylgalactosaminyl-1-phosphate transferase glycosyltransferase	NA	NA	NA	NA
AUR49180.1\|2139568_2141365_+	H(+)/Cl(-) exchange transporter	NA	NA	NA	NA
AUR49784.1\|2141325_2142324_-	small-conductance mechanosensitive channel	NA	NA	NA	NA
AUR49927.1\|2142426_2143311_+\|protease	Beta-barrel assembly-enhancing protease	NA	NA	NA	NA
AUR49677.1\|2144440_2145526_-\|transposase	transposase in ISPg8	A0A077K814	Ralstonia_phage	3.8e-19	27.8
AUR50101.1\|2145629_2146370_-	mu-like prophage protein gp29	NA	NA	NA	NA
AUR49983.1\|2146362_2147202_-	modification methylase	A0A1S5PRR3	Streptococcus_phage	9.0e-69	46.2
AUR49711.1\|2147765_2148818_+	hemagglutinin	NA	NA	NA	NA
AUR49641.1\|2149608_2150700_-	hypothetical protein	NA	NA	NA	NA
AUR49712.1\|2150912_2151965_+	hemagglutinin	NA	NA	NA	NA
AUR49128.1\|2152331_2154338_-	hypothetical protein	NA	NA	NA	NA
AUR49909.1\|2155702_2156605_+\|transposase	transposase in IS195	NA	NA	NA	NA
AUR49910.1\|2157541_2158444_-\|transposase	transposase in IS195	NA	NA	NA	NA
AUR49201.1\|2159030_2160740_-\|protease	serine protease carboxy-terminal processing	NA	NA	NA	NA
AUR49203.1\|2161536_2163243_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.4e-46	30.6
AUR49190.1\|2163289_2165044_-	iron import ATP-binding permease	W8CYL7	Bacillus_phage	9.1e-31	26.0
AUR49468.1\|2165068_2166346_-	hypothetical protein	NA	NA	NA	NA
AUR50026.1\|2166349_2167141_-	hypothetical protein	NA	NA	NA	NA
AUR49051.1\|2167218_2169624_-	exporter RND superfamily	NA	NA	NA	NA
AUR50288.1\|2169664_2170264_-	transcriptional regulator	NA	NA	NA	NA
AUR49911.1\|2171480_2172383_+\|transposase	transposase in IS195	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: CP025930.1|AUR50541.1|105089_105506_-|hypothetical-protein

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Acr_ID: CP025930.1|AUR50543.1|1465093_1465510_-|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP025930.1|AUR50541.1|105089_105506_-|hypothetical-protein

105089_105506_-

138 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5886524822695035	1	1.0

CP025930.1|AUR50543.1|1465093_1465510_-|hypothetical-protein

1465093_1465510_-

138 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5886524822695035	1	1.0

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025930

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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