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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP022361 Bordetella pertussis strain B199 chromosome, complete genome 5 crisprs csa3,DEDDh,cas3,DinG 0 0 31 0

Results visualization

1. CP022361
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022361_1 482519-482612 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022361_2 714711-714820 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022361_3 1902193-1902320 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022361_4 3189387-3189503 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022361_5 4058731-4058815 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 64057 59 Natrialba_phage(12.5%) tRNA,transposase,protease NA
DBSCAN-SWA_2 185342 : 243846 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 272629 : 379969 98 Pseudomonas_phage(10.0%) integrase,tRNA,transposase attL 337321:337340|attR 360945:360964
DBSCAN-SWA_4 404353 : 463822 55 Streptococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_5 567764 : 677108 90 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_6 681522 : 745355 47 Pandoravirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_7 764266 : 833447 55 Bacillus_phage(20.0%) integrase,tRNA,transposase,protease attL 812452:812470|attR 832340:832358
DBSCAN-SWA_8 948008 : 1012073 57 Pseudomonas_phage(30.0%) tRNA,transposase,protease NA
DBSCAN-SWA_9 1044183 : 1112643 54 Staphylococcus_phage(28.57%) tRNA,transposase,protease NA
DBSCAN-SWA_10 1126014 : 1169486 41 uncultured_virus(20.0%) transposase NA
DBSCAN-SWA_11 1178245 : 1250941 60 uncultured_Mediterranean_phage(22.22%) transposase,protease NA
DBSCAN-SWA_12 1265416 : 1322820 54 Pelagibacter_phage(25.0%) transposase NA
DBSCAN-SWA_13 1377470 : 1445978 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_14 1490544 : 1562061 58 Faecalibacterium_phage(12.5%) transposase,protease NA
DBSCAN-SWA_15 1608379 : 1691087 51 Klosneuvirus(16.67%) tRNA,transposase NA
DBSCAN-SWA_16 1760891 : 1801228 34 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_17 1818881 : 1884885 58 uncultured_Mediterranean_phage(11.76%) tRNA,transposase,protease NA
DBSCAN-SWA_18 1913979 : 1983391 58 Klosneuvirus(22.22%) tRNA,transposase,protease NA
DBSCAN-SWA_19 1994595 : 2052627 57 Klosneuvirus(20.0%) transposase NA
DBSCAN-SWA_20 2261462 : 2325647 60 Salmonella_phage(16.67%) transposase,tRNA,protease NA
DBSCAN-SWA_21 2405324 : 2445992 44 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_22 2495647 : 2558406 51 Cedratvirus(33.33%) tRNA,transposase NA
DBSCAN-SWA_23 2751430 : 2895027 121 uncultured_Caudovirales_phage(33.33%) transposase NA
DBSCAN-SWA_24 3111337 : 3179754 55 Oenococcus_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_25 3200623 : 3313989 97 uncultured_Mediterranean_phage(18.75%) holin,tRNA,transposase NA
DBSCAN-SWA_26 3379811 : 3449437 59 Staphylococcus_phage(28.57%) transposase NA
DBSCAN-SWA_27 3487771 : 3537024 39 Vibrio_phage(50.0%) holin,transposase NA
DBSCAN-SWA_28 3549062 : 3588445 42 Synechococcus_phage(18.18%) transposase,tRNA,terminase NA
DBSCAN-SWA_29 3761934 : 3804143 50 uncultured_Caudovirales_phage(25.0%) tail,tRNA,transposase NA
DBSCAN-SWA_30 4031314 : 4084829 44 Bacillus_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_31 4215735 : 4290105 56 uncultured_Mediterranean_phage(16.67%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage