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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025952 Klebsiella pneumoniae subsp. pneumoniae strain GD4 plasmid pKPGD4, complete sequence 0 crisprs RT 0 0 2 0
CP025951 Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome 0 crisprs DEDDh,RT,DinG,cas3,WYL,csa3 0 0 12 0

Results visualization

1. CP025952
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3143 : 52294 53 Escherichia_phage(31.58%) transposase NA
DBSCAN-SWA_2 91600 : 160607 83 Escherichia_phage(37.93%) transposase,protease,integrase attL 114902:114961|attR 166601:167407
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP025951
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 186 : 5457 6 Salmonella_phage(50.0%) holin NA
DBSCAN-SWA_2 335575 : 342481 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_3 383014 : 398760 15 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_4 1375342 : 1386230 10 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_5 1580272 : 1652969 84 uncultured_Caudovirales_phage(33.33%) transposase,plate,lysis,terminase,protease,head,tail NA
DBSCAN-SWA_6 1685902 : 1716946 41 Enterobacteria_phage(37.5%) holin,transposase,integrase attL 1685684:1685699|attR 1714252:1714267
DBSCAN-SWA_7 2079286 : 2164692 84 Salmonella_phage(47.92%) transposase,plate,capsid,portal,tRNA,protease,integrase,head,tail attL 2134812:2134830|attR 2164767:2164785
DBSCAN-SWA_8 2818236 : 2829889 13 Enterobacteria_phage(70.0%) integrase attL 2818686:2818700|attR 2841742:2841756
DBSCAN-SWA_9 3297893 : 3306010 8 Enterobacteria_phage(83.33%) transposase NA
DBSCAN-SWA_10 4377199 : 4446577 75 uncultured_Caudovirales_phage(61.11%) capsid,portal,terminase,tRNA,integrase,protease,tail,head attL 4394807:4394824|attR 4410802:4410819
DBSCAN-SWA_11 5169722 : 5248542 86 Salmonella_phage(73.47%) transposase,plate,coat,capsid,portal,tRNA,integrase,head,tail attL 5169137:5169183|attR 5207492:5207538
DBSCAN-SWA_12 5323582 : 5362456 51 Salmonella_phage(38.64%) tail,terminase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage