CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP025751	Escherichia coli strain CV839-06 plasmid pCV839-06-p1, complete sequence	0 crisprs	csa3	0	0
CP025753	Escherichia coli strain CV839-06 chromosome, complete genome	10 crisprs	DinG,DEDDh,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,WYL	22	11
CP025752	Escherichia coli strain CV839-06 plasmid pCV839-06-p2, complete sequence	0 crisprs	NA	0	1

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP025753_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025753_1

145784-145875

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025753_1

>merge|CP025753|1|145784-145875|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>CP025753|1|1|145784-145875|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
CP025753.1\|AUP42837.1\|146298_146895_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
CP025753.1\|AUP42833.1\|143225_143816_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
CP025753.1\|AUP42840.1\|148572_148704_-\|membrane-protein	unknown	unknown	unknown
CP025753.1\|AUP42826.1\|134956_135175_+\|hypothetical-protein	unknown	unknown	unknown
CP025753.1\|AUP42841.1\|148713_149973_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182074
CP025753.1\|AUP42843.1\|151152_151458_+\|chaperone-modulator-protein-CbpM	unknown	unknown	gnl\|CDD\|182346
CP025753.1\|AUP42828.1\|139300_139939_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|184970
CP025753.1\|AUP42844.1\|151550_152150_-\|chaperone-protein-TorD	unknown	unknown	gnl\|CDD\|235326
CP025753.1\|AUP42838.1\|146915_147143_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
CP025753.1\|AUP42830.1\|141314_142010_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|163356
CP025753.1\|AUP42834.1\|143826_144321_+\|FMN-reductase-hypothetical-protein	unknown	unknown	gnl\|CDD\|132654
CP025753.1\|AUP42835.1\|144341_145670_+\|pyrimidine-permease	unknown	unknown	gnl\|CDD\|132655
CP025753.1\|AUP42829.1\|140226_141318_+\|pyrimidine-monooxygenase	unknown	unknown	gnl\|CDD\|163355
CP025753.1\|AUP42839.1\|147180_148422_-\|glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
CP025753.1\|AUP42827.1\|135298_139261_+\|bifunctional-proline-dehydrogenase/pyrroline-5-carboxylate-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
CP025753.1\|AUP42846.1\|154692_155865_-\|trimethylamine-N-oxide-reductase-cytochrome-C-subunit	unknown	unknown	gnl\|CDD\|184992
CP025753.1\|AUP42832.1\|142415_143216_+\|aminoacrylate-hydrolase	unknown	unknown	gnl\|CDD\|211851
CP025753.1\|AUP42842.1\|150232_151153_+\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
CP025753.1\|AUP42845.1\|152146_154693_-\|trimethylamine-N-oxide-reductase-I-catalytic-subunit	unknown	unknown	gnl\|CDD\|237909
CP025753.1\|AUP42831.1\|142021_142408_+\|aminoacrylate-peracid-reductase	unknown	unknown	gnl\|CDD\|274677

Protein	Function_ID	Function_description	E-value
CP025753.1\|AUP42837.1\|146298_146895_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133
CP025753.1\|AUP42833.1\|143225_143816_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	1.00331e-130
CP025753.1\|AUP42844.1\|151550_152150_-\|chaperone-protein-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	5.28244e-84
CP025753.1\|AUP42841.1\|148713_149973_-\|hypothetical-protein	gnl\|CDD\|182074	PRK09784, PRK09784, YccE family protein.	0
CP025753.1\|AUP42843.1\|151152_151458_+\|chaperone-modulator-protein-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	5.75956e-65
CP025753.1\|AUP42828.1\|139300_139939_-\|transcriptional-regulator	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	1.3356e-153
CP025753.1\|AUP42838.1\|146915_147143_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44
CP025753.1\|AUP42830.1\|141314_142010_+\|amidohydrolase	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	4.29848e-169
CP025753.1\|AUP42834.1\|143826_144321_+\|FMN-reductase-hypothetical-protein	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	8.28716e-106
CP025753.1\|AUP42835.1\|144341_145670_+\|pyrimidine-permease	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
CP025753.1\|AUP42829.1\|140226_141318_+\|pyrimidine-monooxygenase	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
CP025753.1\|AUP42839.1\|147180_148422_-\|glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
CP025753.1\|AUP42827.1\|135298_139261_+\|bifunctional-proline-dehydrogenase/pyrroline-5-carboxylate-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
CP025753.1\|AUP42846.1\|154692_155865_-\|trimethylamine-N-oxide-reductase-cytochrome-C-subunit	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
CP025753.1\|AUP42832.1\|142415_143216_+\|aminoacrylate-hydrolase	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	8.05337e-142
CP025753.1\|AUP42842.1\|150232_151153_+\|DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
CP025753.1\|AUP42845.1\|152146_154693_-\|trimethylamine-N-oxide-reductase-I-catalytic-subunit	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0
CP025753.1\|AUP42831.1\|142021_142408_+\|aminoacrylate-peracid-reductase	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	5.99808e-85

>CP025753.1|AUP42835.1|144341_145670_+|pyrimidine-permease
MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNLLGLGKAVDFTLVSHAAWFGLPHFSTPAFNSQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRKLVDVPPPEVVHQEP
>CP025753.1|AUP42834.1|143826_144321_+|FMN-reductase-hypothetical-protein
MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHTTPYGLVWFDRSYHALMRPAC
>CP025753.1|AUP42833.1|143225_143816_+|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWRETPVSDETLREIYALMKWGPTSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPQLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQHVDDAFFAGSTLKSNLLINIGYGDSSKLFARLPRLSFEEACGLL
>CP025753.1|AUP42832.1|142415_143216_+|aminoacrylate-hydrolase
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARVPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGLASLLHHREAAL
>CP025753.1|AUP42831.1|142021_142408_+|aminoacrylate-peracid-reductase
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>CP025753.1|AUP42830.1|141314_142010_+|amidohydrolase
MMTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSPTSFARIA
>CP025753.1|AUP42829.1|140226_141318_+|pyrimidine-monooxygenase
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFAPTAVRMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA
>CP025753.1|AUP42828.1|139300_139939_-|transcriptional-regulator
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
>CP025753.1|AUP42827.1|135298_139261_+|bifunctional-proline-dehydrogenase/pyrroline-5-carboxylate-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGFVREATPREVEQALESAVNNAPIWFATPPVERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>CP025753.1|AUP42826.1|134956_135175_+|hypothetical-protein
MFYQGDRILPEALVIHNRFNTPFTLNFSAQRHYFSSGCTLSHFLRLHLSKMLTAAEKKSELFFNPCHIDFFY
>CP025753.1|AUP42837.1|146298_146895_+|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>CP025753.1|AUP42838.1|146915_147143_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>CP025753.1|AUP42839.1|147180_148422_-|glucose-1-phosphatase/inositol-phosphatase
MNKTLIAATVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAQQGMVKSGECPPPDTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDANGFCPMDKFDSVLNEAVK
>CP025753.1|AUP42840.1|148572_148704_-|membrane-protein
MLKTIVISLTSLIIGTIASVLVTPLIFCLATGVIISGVREAGS
>CP025753.1|AUP42841.1|148713_149973_-|hypothetical-protein
MSSNIHGISCTANNYLKQAWNNIKNEHEKNQKYSITLFENTLVCFMRLYKEIRRQKAEDYIPCLECDSLEKEFEEMQNDNDLSLFLRTLRTNDTETYSGVSEGITYTIQYVRDIDIVRVSLPGRGSESITDFKGYYWYGFMEYIENINACDDVFSEYCLDDENMSIQPEWINTPGISDLDTGIDLSGISFIQSEINKTYGLKYAPVDGDGYCLLRAILVLKEHEYSWALGSHKTQKQVYEEFIKIVDKQTIEALVDTAFNDLREDVKTLFGVNLQSDNKIQGQGGFLSWSFLSFKKEFIDSCLNDKKCILHLPEFIFNDNKARLVLDTDPEQKVNEVKNFLTALSDSICSLFIVNSNVASISLGNESFSTDDDLEYGYLINTGNHYDVYLPPELFAQAYELNNKERNAQIDFLTRYAIY
>CP025753.1|AUP42842.1|150232_151153_+|DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHSDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
>CP025753.1|AUP42843.1|151152_151458_+|chaperone-modulator-protein-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
>CP025753.1|AUP42844.1|151550_152150_-|chaperone-protein-TorD
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLAAAVNELENCIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFVVRCRQYDSFGFYAALSQLLLVLVESDHQNR
>CP025753.1|AUP42845.1|152146_154693_-|trimethylamine-N-oxide-reductase-I-catalytic-subunit
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATDAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAYTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGAVEQVTAFNGPVEMVAQCEYVPASQVKS
>CP025753.1|AUP42846.1|154692_155865_-|trimethylamine-N-oxide-reductase-cytochrome-C-subunit
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDMPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP025753_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025753_2

408848-408992

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025753_2

>merge|CP025753|2|408848-408992|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

>CP025753|2|2|408848-408992|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	TGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

Protein	Signature genes	Signature genes Name	Protein_function
CP025753.1\|AUP43080.1\|416246_417167_+\|pyridoxal-phosphate-phosphatase	unknown	unknown	gnl\|CDD\|182523
CP025753.1\|AUP43073.1\|407498_408782_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|236709
CP025753.1\|AUP43067.1\|401832_402510_-\|dithiobiotin-synthetase	unknown	unknown	gnl\|CDD\|234625
CP025753.1\|AUP43076.1\|412968_414021_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380230
CP025753.1\|AUP43075.1\|411459_412893_-\|membrane-protein-putative-transporter	unknown	unknown	gnl\|CDD\|279307
CP025753.1\|AUP43071.1\|405579_406812_+\|adenosylmethionine--8-amino-7-oxononanoate-aminotransferase	unknown	unknown	gnl\|CDD\|181189
CP025753.1\|AUP43072.1\|406870_407347_+\|kinase-inhibitor-protein	unknown	unknown	gnl\|CDD\|182339
CP025753.1\|AUP43078.1\|414106_414223_-\|hypothetical-protein	unknown	unknown	unknown
CP025753.1\|AUP43083.1\|418917_419691_-\|molybdenum-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
CP025753.1\|AUP43068.1\|402502_403258_-\|biotin-biosynthesis-protein-BioC	unknown	unknown	gnl\|CDD\|182340
CP025753.1\|AUP43070.1\|404395_405436_-\|biotin-synthase	unknown	unknown	gnl\|CDD\|185063
CP025753.1\|AUP43074.1\|409015_411277_-\|hydratase	unknown	unknown	gnl\|CDD\|183125
CP025753.1\|AUP43064.1\|396746_397736_-\|molybdenum-cofactor-biosynthesis-protein-A	unknown	unknown	gnl\|CDD\|234672
CP025753.1\|AUP43069.1\|403244_404399_-\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
CP025753.1\|AUP43079.1\|415198_416194_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
CP025753.1\|AUP43077.1\|414204_415158_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131
CP025753.1\|AUP43065.1\|398132_399041_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|211689
CP025753.1\|AUP43081.1\|417167_418226_-\|molybdenum-import-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
CP025753.1\|AUP43066.1\|399232_401254_-\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
CP025753.1\|AUP43082.1\|418228_418918_-\|molybdate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181841

Protein	Function_ID	Function_description	E-value
CP025753.1\|AUP43080.1\|416246_417167_+\|pyridoxal-phosphate-phosphatase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
CP025753.1\|AUP43073.1\|407498_408782_+\|acyl-CoA-thioesterase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
CP025753.1\|AUP43067.1\|401832_402510_-\|dithiobiotin-synthetase	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	7.09172e-110
CP025753.1\|AUP43076.1\|412968_414021_-\|hypothetical-protein	gnl\|CDD\|380230	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase.	0
CP025753.1\|AUP43075.1\|411459_412893_-\|membrane-protein-putative-transporter	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
CP025753.1\|AUP43071.1\|405579_406812_+\|adenosylmethionine--8-amino-7-oxononanoate-aminotransferase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
CP025753.1\|AUP43072.1\|406870_407347_+\|kinase-inhibitor-protein	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	1.08182e-118
CP025753.1\|AUP43083.1\|418917_419691_-\|molybdenum-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0
CP025753.1\|AUP43068.1\|402502_403258_-\|biotin-biosynthesis-protein-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	7.9121e-172
CP025753.1\|AUP43070.1\|404395_405436_-\|biotin-synthase	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
CP025753.1\|AUP43074.1\|409015_411277_-\|hydratase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
CP025753.1\|AUP43064.1\|396746_397736_-\|molybdenum-cofactor-biosynthesis-protein-A	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	0
CP025753.1\|AUP43069.1\|403244_404399_-\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
CP025753.1\|AUP43079.1\|415198_416194_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
CP025753.1\|AUP43077.1\|414204_415158_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.09679e-82
CP025753.1\|AUP43065.1\|398132_399041_+\|hypothetical-protein	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	2.22556e-139
CP025753.1\|AUP43081.1\|417167_418226_-\|molybdenum-import-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
CP025753.1\|AUP43066.1\|399232_401254_-\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP025753.1\|AUP43082.1\|418228_418918_-\|molybdate-ABC-transporter-permease	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	2.41762e-146

>CP025753.1|AUP43073.1|407498_408782_+|acyl-CoA-thioesterase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>CP025753.1|AUP43072.1|406870_407347_+|kinase-inhibitor-protein
MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS
>CP025753.1|AUP43071.1|405579_406812_+|adenosylmethionine--8-amino-7-oxononanoate-aminotransferase
MTSPLPVYPVVSAEGCELILSDGKRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEYAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAIIESGEWQQQVAAIEVQLREQLAPARDAEMVADVRVLGAIGVVETTRPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ
>CP025753.1|AUP43070.1|404395_405436_-|biotin-synthase
MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL
>CP025753.1|AUP43069.1|403244_404399_-|8-amino-7-oxononanoate-synthase
MSWQEKINAALDARRTADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG
>CP025753.1|AUP43068.1|402502_403258_-|biotin-biosynthesis-protein-BioC
MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE
>CP025753.1|AUP43067.1|401832_402510_-|dithiobiotin-synthetase
MSKRYFVTGTDTEVGKTVASCALLQAAKAVGYRTAGYKPVASGSEKTPEGLRNSDALALQHNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQAIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL
>CP025753.1|AUP43066.1|399232_401254_-|excinuclease-ABC-subunit-B
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>CP025753.1|AUP43065.1|398132_399041_+|hypothetical-protein
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG
>CP025753.1|AUP43064.1|396746_397736_-|molybdenum-cofactor-biosynthesis-protein-A
MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNKGFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELLRRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLFGEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG
>CP025753.1|AUP43074.1|409015_411277_-|hydratase
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYKIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>CP025753.1|AUP43075.1|411459_412893_-|membrane-protein-putative-transporter
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>CP025753.1|AUP43076.1|412968_414021_-|hypothetical-protein
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
>CP025753.1|AUP43078.1|414106_414223_-|hypothetical-protein
MIIHASLLLRKMEATILGGWSLKILTAFSQLKLMKKCY
>CP025753.1|AUP43077.1|414204_415158_+|LysR-family-transcriptional-regulator
MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG
>CP025753.1|AUP43079.1|415198_416194_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYSIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>CP025753.1|AUP43080.1|416246_417167_+|pyridoxal-phosphate-phosphatase
MAVNAELKRRILSDSGIGVPFAQTKILNLNLEYAMTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>CP025753.1|AUP43081.1|417167_418226_-|molybdenum-import-ATP-binding-protein-ModC
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA
>CP025753.1|AUP43082.1|418228_418918_-|molybdate-ABC-transporter-permease
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>CP025753.1|AUP43083.1|418917_419691_-|molybdenum-ABC-transporter-substrate-binding-protein
MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDIATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASEQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVAIFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP025753_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025753_3

908923-909076

Orphan

Consensus_repeat	Method
CGCCTTATCCGGCCTACCGATCCAGCACAGGTTTGTAGGCATGATAAGACGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025753_3

>merge|CP025753|3|908923-909076|CRISPRCasFinder
CGCCTTATCCGGCCTACCGATCCAGCACAGGTTTGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCTGCGCATAACCGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACCGATCCGGCACAGGTTTGTAGGCATGATAAGACGCG

>CP025753|3|3|908923-909076|CRISPRCasFinder
CGCCTTATCCGGCCTACCGATCCAGCACAGGTTTGTAGGCATGATAAGACGCG	TCAGCGTCGCATCAGGCATCTGCGCATAACCGCCGGATGCGGCGTAAA
CGCCTTATCCGGCCTACCGATCCGGCACAGGTTTGTAGGCATGATAAGACGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP025753.1\|AUP43543.1\|909778_910528_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223862
CP025753.1\|AUP43542.1\|909105_909603_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224854
CP025753.1\|AUP43538.1\|907048_908788_+\|flagellar-biosynthesis-protein-FlhA	unknown	unknown	gnl\|CDD\|224217
CP025753.1\|AUP43535.1\|904170_904425_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181972
CP025753.1\|AUP43550.1\|917256_918300_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227720
CP025753.1\|AUP43539.1\|906318_907089_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235860
CP025753.1\|AUP43545.1\|911539_912307_-\|glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|372525
CP025753.1\|AUP43532.1\|902356_903814_+\|aminoacyl-histidine-dipeptidase	unknown	unknown	gnl\|CDD\|184986
CP025753.1\|AUP43544.1\|910828_911569_+\|transpeptidase-hypothetical-protein	unknown	unknown	gnl\|CDD\|225577
CP025753.1\|AUP43534.1\|904004_904202_-\|peptide-chain-release-factor	unknown	unknown	gnl\|CDD\|181271
CP025753.1\|AUP43531.1\|901637_902096_-\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236395
CP025753.1\|AUP43533.1\|903870_904011_-\|peptide-chain-release-factor	unknown	unknown	gnl\|CDD\|181271
CP025753.1\|AUP43548.1\|915817_916267_-\|C-lysozyme-inhibitor	unknown	unknown	gnl\|CDD\|182187
CP025753.1\|AUP43551.1\|918653_919103_-\|hypothetical-protein	unknown	unknown	unknown
CP025753.1\|AUP43530.1\|900301_901546_-\|fermentation/respiration-switch-protein	unknown	unknown	gnl\|CDD\|235337
CP025753.1\|AUP43549.1\|916444_917215_+\|C-N-hydrolase-family-amidase	unknown	unknown	gnl\|CDD\|182461
CP025753.1\|AUP43537.1\|905192_906248_-\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
CP025753.1\|AUP43546.1\|912512_913091_-\|phosphoheptose-isomerase	unknown	unknown	gnl\|CDD\|179012
CP025753.1\|AUP43547.1\|913330_915775_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236528
CP025753.1\|AUP43536.1\|904743_905196_-\|acyltransferase	unknown	unknown	gnl\|CDD\|182099

Protein	Function_ID	Function_description	E-value
CP025753.1\|AUP43543.1\|909778_910528_-\|hypothetical-protein	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	3.06441e-41
CP025753.1\|AUP43542.1\|909105_909603_-\|hypothetical-protein	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	7.32036e-43
CP025753.1\|AUP43538.1\|907048_908788_+\|flagellar-biosynthesis-protein-FlhA	gnl\|CDD\|224217	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion].	0
CP025753.1\|AUP43535.1\|904170_904425_-\|hypothetical-protein	gnl\|CDD\|181972	PRK09588, PRK09588, hypothetical protein; Reviewed.	4.40806e-42
CP025753.1\|AUP43550.1\|917256_918300_-\|hypothetical-protein	gnl\|CDD\|227720	COG5433, COG5433, Transposase [DNA replication, recombination, and repair].	1.18125e-32
CP025753.1\|AUP43539.1\|906318_907089_-\|hypothetical-protein	gnl\|CDD\|235860	PRK06778, PRK06778, hypothetical protein; Validated.	2.23907e-171
CP025753.1\|AUP43545.1\|911539_912307_-\|glutamine-amidotransferase	gnl\|CDD\|372525	pfam13230, GATase_4, Glutamine amidotransferases class-II. This family captures members that are not found in pfam00310.	8.29603e-146
CP025753.1\|AUP43532.1\|902356_903814_+\|aminoacyl-histidine-dipeptidase	gnl\|CDD\|184986	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional.	0
CP025753.1\|AUP43544.1\|910828_911569_+\|transpeptidase-hypothetical-protein	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.07529e-116
CP025753.1\|AUP43534.1\|904004_904202_-\|peptide-chain-release-factor	gnl\|CDD\|181271	PRK08179, prfH, peptide chain release factor-like protein; Reviewed.	1.65051e-35
CP025753.1\|AUP43531.1\|901637_902096_-\|xanthine-phosphoribosyltransferase	gnl\|CDD\|236395	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated.	5.05624e-113
CP025753.1\|AUP43533.1\|903870_904011_-\|peptide-chain-release-factor	gnl\|CDD\|181271	PRK08179, prfH, peptide chain release factor-like protein; Reviewed.	6.09679e-17
CP025753.1\|AUP43548.1\|915817_916267_-\|C-lysozyme-inhibitor	gnl\|CDD\|182187	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional.	3.55245e-91
CP025753.1\|AUP43530.1\|900301_901546_-\|fermentation/respiration-switch-protein	gnl\|CDD\|235337	PRK05077, frsA, esterase FrsA.	0
CP025753.1\|AUP43549.1\|916444_917215_+\|C-N-hydrolase-family-amidase	gnl\|CDD\|182461	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional.	0
CP025753.1\|AUP43537.1\|905192_906248_-\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
CP025753.1\|AUP43546.1\|912512_913091_-\|phosphoheptose-isomerase	gnl\|CDD\|179012	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase.	1.61173e-142
CP025753.1\|AUP43547.1\|913330_915775_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|236528	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed.	0
CP025753.1\|AUP43536.1\|904743_905196_-\|acyltransferase	gnl\|CDD\|182099	PRK09831, PRK09831, GNAT family N-acetyltransferase.	4.77997e-103

>CP025753.1|AUP43538.1|907048_908788_+|flagellar-biosynthesis-protein-FlhA
MLSRSDLLTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRISDNGDITHDVRHQLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPAQKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSMAPRLAEDLSAALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSAVTKDHILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQGGKVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYARLFAPGLHVLSYNEVPDELELKIMGALM
>CP025753.1|AUP43539.1|906318_907089_-|hypothetical-protein
MIVNSVSKSERESIIAALHGQSIFSGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRMR
>CP025753.1|AUP43537.1|905192_906248_-|DNA-polymerase-IV
MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELHLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVILLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL
>CP025753.1|AUP43536.1|904743_905196_-|acyltransferase
MNNIQIRNYQPGDFQQLCAIFIRAVMMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFISRIERHIDMLFVDPEYTRRGVASALLKPLIKSESELTVDASITAKPFFERYGFQIVKQQHVECRGAWFTNFYMRYKPQH
>CP025753.1|AUP43535.1|904170_904425_-|hypothetical-protein
MGKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPARRRGNGAGNRNGPLL
>CP025753.1|AUP43534.1|904004_904202_-|peptide-chain-release-factor
MLETETGRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRSHHGRKNWFLGMLTNGWRDC
>CP025753.1|AUP43533.1|903870_904011_-|peptide-chain-release-factor
MLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAFIEG
>CP025753.1|AUP43532.1|902356_903814_+|aminoacyl-histidine-dipeptidase
MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWLQADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQDILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIKSVGHYWTLLTELLKEIPAK
>CP025753.1|AUP43531.1|901637_902096_-|xanthine-phosphoribosyltransferase
MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRPLVDNYVVDIPQDTWIEQPWDMGVVFVPPISGR
>CP025753.1|AUP43530.1|900301_901546_-|fermentation/respiration-switch-protein
MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLQGDDLAEQAQALSNRAYEEAAQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDDALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFNPVYRNFDKGLQEITGWIEKRLC
>CP025753.1|AUP43542.1|909105_909603_-|hypothetical-protein
MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRHAIIKVKRDRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHAIRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVARGLYPIDWAGDVTDINAGERIIL
>CP025753.1|AUP43543.1|909778_910528_-|hypothetical-protein
MSSFLLGRFLHPGVFSLCVLLPLFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNKILEAKLPRTANEMYHYHRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGENIRVSRLAEPFWQDHFLGARRILTEETIL
>CP025753.1|AUP43544.1|910828_911569_+|transpeptidase-hypothetical-protein
MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLSHEVVQPQLASNYTLPEAK
>CP025753.1|AUP43545.1|911539_912307_-|glutamine-amidotransferase
MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRNWTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIASLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTTPNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV
>CP025753.1|AUP43546.1|912512_913091_-|phosphoheptose-isomerase
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
>CP025753.1|AUP43547.1|913330_915775_+|acyl-CoA-dehydrogenase
MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWSAWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKNHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAVLKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRHYLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEALVDVIAADPIHQRICKELGKNLPFTRLDELAHNALAKGLIDKDEAAILVKAEESRLCSINVDDFDPEELATKPVKLPEKVRKVEAA
>CP025753.1|AUP43548.1|915817_916267_-|C-lysozyme-inhibitor
MMFKAITTVAALVIATSAMAQDDLTISSLAKGETTKAAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK
>CP025753.1|AUP43549.1|916444_917215_+|C-N-hydrolase-family-amidase
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQNDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAIYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMVALREYREKFPAWQDADEFRLR
>CP025753.1|AUP43550.1|917256_918300_-|hypothetical-protein
MTIFAVISGAESWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIRTDEKSNEITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNPEHDSYAMSEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAESGLS
>CP025753.1|AUP43551.1|918653_919103_-|hypothetical-protein
MMKYLMVLLSLFSGSVLGMGRVNELCGIDSVKTIEIINLPSYVTTLVPLSKEGLNEIYRYKVVVNEISDLYAGKIIDLLQMKYFRKEKYNNIRWGVSIISKGNNKCEIYFDAFGECGSVNGINVCFEKNEMIGWIKKEIPLLSQKIGGL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP025753_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025753_4

1118792-1118907

Orphan

Consensus_repeat	Method
AACGCCTGATGCGACGCTGACGCGTCTTATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025753_4

>merge|CP025753|4|1118792-1118907|CRISPRCasFinder
AACGCCTGATGCGACGCTGACGCGTCTTATCTGGCCTACGCGCTGTGTTTTTGTAGGCCGGATAAGCAAAGCGCATCCGGCATTCAACGCCTGATGCGACGCTGGCGCGTCTTATC

>CP025753|4|4|1118792-1118907|CRISPRCasFinder
AACGCCTGATGCGACGCTGACGCGTCTTATC	TGGCCTACGCGCTGTGTTTTTGTAGGCCGGATAAGCAAAGCGCATCCGGCATTC
AACGCCTGATGCGACGCTGGCGCGTCTTATC

Protein	Signature genes	Signature genes Name	Protein_function
CP025753.1\|AUP43734.1\|1122404_1125164_+\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|235319
CP025753.1\|AUP43728.1\|1113491_1114256_-\|membrane-protein	unknown	unknown	gnl\|CDD\|223659
CP025753.1\|AUP43722.1\|1106807_1107986_-\|sugar-MFS-transporter	unknown	unknown	gnl\|CDD\|129977
CP025753.1\|AUP43730.1\|1115558_1117259_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP025753.1\|AUP43731.1\|1117269_1118772_+\|arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP025753.1\|AUP43726.1\|1111085_1112696_+\|thiamine-transporter-membrane-protein	unknown	unknown	gnl\|CDD\|181853
CP025753.1\|AUP43736.1\|1125951_1126767_-\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|236512
CP025753.1\|AUP43737.1\|1127021_1129376_+\|LPS-assembly-outer-membrane-complex-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP025753.1\|AUP43725.1\|1110126_1111110_+\|thiamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236883
CP025753.1\|AUP43723.1\|1108087_1108219_-\|inhibitor-of-glucose-transporter	unknown	unknown	gnl\|CDD\|374203
CP025753.1\|AUP43739.1\|1130714_1131704_+\|4-hydroxythreonine-4-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234696
CP025753.1\|AUP43741.1\|1132524_1132902_+\|cobalt-transporter	unknown	unknown	gnl\|CDD\|180098
CP025753.1\|AUP43729.1\|1114341_1115271_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|236717
CP025753.1\|AUP43732.1\|1118971_1119667_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP025753.1\|AUP43740.1\|1131700_1132522_+\|16S-rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|234708
CP025753.1\|AUP43735.1\|1125175_1125835_+\|23S-rRNA/tRNA-pseudouridine-synthase-A	unknown	unknown	gnl\|CDD\|236659
CP025753.1\|AUP43733.1\|1119741_1122093_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP025753.1\|AUP43724.1\|1108307_1109963_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|184188
CP025753.1\|AUP43727.1\|1112679_1113378_+\|thiamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182716
CP025753.1\|AUP43738.1\|1129428_1130715_+\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|236758

Protein	Function_ID	Function_description	E-value
CP025753.1\|AUP43734.1\|1122404_1125164_+\|ATP-dependent-helicase	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP025753.1\|AUP43728.1\|1113491_1114256_-\|membrane-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.77639e-49
CP025753.1\|AUP43722.1\|1106807_1107986_-\|sugar-MFS-transporter	gnl\|CDD\|129977	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
CP025753.1\|AUP43730.1\|1115558_1117259_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP025753.1\|AUP43731.1\|1117269_1118772_+\|arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP025753.1\|AUP43726.1\|1111085_1112696_+\|thiamine-transporter-membrane-protein	gnl\|CDD\|181853	PRK09433, thiP, thiamine transporter membrane protein; Reviewed.	0
CP025753.1\|AUP43736.1\|1125951_1126767_-\|molecular-chaperone-DnaJ	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.49529e-169
CP025753.1\|AUP43737.1\|1127021_1129376_+\|LPS-assembly-outer-membrane-complex-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP025753.1\|AUP43725.1\|1110126_1111110_+\|thiamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236883	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional.	0
CP025753.1\|AUP43723.1\|1108087_1108219_-\|inhibitor-of-glucose-transporter	gnl\|CDD\|374203	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT.	0.00206924
CP025753.1\|AUP43739.1\|1130714_1131704_+\|4-hydroxythreonine-4-phosphate-dehydrogenase	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP025753.1\|AUP43741.1\|1132524_1132902_+\|cobalt-transporter	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	3.63315e-76
CP025753.1\|AUP43729.1\|1114341_1115271_-\|transcriptional-regulator	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
CP025753.1\|AUP43732.1\|1118971_1119667_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	1.31794e-177
CP025753.1\|AUP43740.1\|1131700_1132522_+\|16S-rRNA-methyltransferase	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.76119e-148
CP025753.1\|AUP43735.1\|1125175_1125835_+\|23S-rRNA/tRNA-pseudouridine-synthase-A	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	1.37214e-159
CP025753.1\|AUP43733.1\|1119741_1122093_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP025753.1\|AUP43724.1\|1108307_1109963_+\|transcriptional-regulator	gnl\|CDD\|184188	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR.	0
CP025753.1\|AUP43727.1\|1112679_1113378_+\|thiamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|182716	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ.	1.49788e-164
CP025753.1\|AUP43738.1\|1129428_1130715_+\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0

>CP025753.1|AUP43731.1|1117269_1118772_+|arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR
>CP025753.1|AUP43730.1|1115558_1117259_+|ribulokinase
MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDTTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPCSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVPTL
>CP025753.1|AUP43729.1|1114341_1115271_-|transcriptional-regulator
MQYGQLVSSLNGGSMKSMAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEKVNDVAVKLS
>CP025753.1|AUP43728.1|1113491_1114256_-|membrane-protein
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGSVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGG
>CP025753.1|AUP43727.1|1112679_1113378_+|thiamine-ABC-transporter-ATP-binding-protein
MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTNELLSGKASASALLGITG
>CP025753.1|AUP43726.1|1111085_1112696_+|thiamine-transporter-membrane-protein
MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWVAVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
>CP025753.1|AUP43725.1|1110126_1111110_+|thiamine-ABC-transporter-substrate-binding-protein
MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR
>CP025753.1|AUP43724.1|1108307_1109963_+|transcriptional-regulator
MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNTTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP
>CP025753.1|AUP43723.1|1108087_1108219_-|inhibitor-of-glucose-transporter
MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES
>CP025753.1|AUP43722.1|1106807_1107986_-|sugar-MFS-transporter
MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREVGAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRHYLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSSVMRAQLSLAWVIGPPLAFMLALNYGFTVMFSIAAGIFTLSLVLIAFMLPSVARVELPSENALSMQGGWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSELGLPDKLAGFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVAAGVLFYTGLIFFHSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVIQGAIAQSWGHFAVYWVIAVISVVALFLTAKVKDV
>CP025753.1|AUP43732.1|1118971_1119667_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRLVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVSIATGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ
>CP025753.1|AUP43733.1|1119741_1122093_+|DNA-polymerase-II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDIRNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASALDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRIPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYIRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF
>CP025753.1|AUP43734.1|1122404_1125164_+|ATP-dependent-helicase
MTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
>CP025753.1|AUP43735.1|1125175_1125835_+|23S-rRNA/tRNA-pseudouridine-synthase-A
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF
>CP025753.1|AUP43736.1|1125951_1126767_-|molecular-chaperone-DnaJ
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
>CP025753.1|AUP43737.1|1127021_1129376_+|LPS-assembly-outer-membrane-complex-protein-LptD
MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNSL
>CP025753.1|AUP43738.1|1129428_1130715_+|peptidyl-prolyl-cis-trans-isomerase
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATADIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN
>CP025753.1|AUP43739.1|1130714_1131704_+|4-hydroxythreonine-4-phosphate-dehydrogenase
MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRTYSPNSPAQPQTAGTLTLLPVALRESVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPLLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ
>CP025753.1|AUP43740.1|1131700_1132522_+|16S-rRNA-methyltransferase
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES
>CP025753.1|AUP43741.1|1132524_1132902_+|cobalt-transporter
MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP025753_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025753_5

1141820-1141952

Orphan

Consensus_repeat	Method
ATCACCAATATTGAAAA	PILER-CR

2 spacers

The CRISPR arrays of CP025753_5

>merge|CP025753|5|1141820-1141952|PILER-CR
ATCACCAATATTGAAAATGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGTTCCTCACCAATATTGAAAACATGGCGTAGCAAAAAGAAATTTTCAATATTGCTTTATGGATCACCAATATTGAAAG

>CP025753|5|1|1141820-1141952|PILER-CR
ATCACCAATATTGAAAA	TGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGTTC
CTCACCAATATTGAAAA	CATGGCGTAGCAAAAAGAAATTTTCAATATTGCTTTATGG
ATCACCAATATTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP025753.1\|AUP43753.1\|1145018_1146236_+\|crotonobetainyl-CoA:carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
CP025753.1\|AUP43742.1\|1132908_1133751_+\|diadenosine-tetraphosphatase	unknown	unknown	gnl\|CDD\|273208
CP025753.1\|AUP43743.1\|1133828_1134419_-\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
CP025753.1\|AUP43760.1\|1153333_1154377_-\|carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
CP025753.1\|AUP43748.1\|1138665_1139952_-\|oxidoreductase-FixC	unknown	unknown	gnl\|CDD\|182273
CP025753.1\|AUP43741.1\|1132524_1132902_+\|cobalt-transporter	unknown	unknown	gnl\|CDD\|180098
CP025753.1\|AUP43758.1\|1149868_1150087_+\|hypothetical-protein	unknown	unknown	unknown
CP025753.1\|AUP43757.1\|1149438_1149834_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|183154
CP025753.1\|AUP43749.1\|1140002_1140944_-\|protein-fixB	unknown	unknown	gnl\|CDD\|235120
CP025753.1\|AUP43747.1\|1138381_1138669_-\|putative-ferredoxin-like-protein-fixX	unknown	unknown	gnl\|CDD\|185346
CP025753.1\|AUP43744.1\|1134499_1136362_-\|potassium-transporter	unknown	unknown	gnl\|CDD\|235131
CP025753.1\|AUP43751.1\|1142202_1143717_+\|antiporter-putative-transporter	unknown	unknown	gnl\|CDD\|179568
CP025753.1\|AUP43745.1\|1136354_1136885_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234852
CP025753.1\|AUP43756.1\|1148762_1149353_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
CP025753.1\|AUP43759.1\|1150094_1153316_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
CP025753.1\|AUP43750.1\|1140958_1141729_-\|electron-transfer-flavoprotein-FixB	unknown	unknown	gnl\|CDD\|179569
CP025753.1\|AUP43746.1\|1136992_1138324_-\|metabolite-transporter	unknown	unknown	gnl\|CDD\|340874
CP025753.1\|AUP43755.1\|1147863_1148757_+\|carnitinyl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|179599
CP025753.1\|AUP43752.1\|1143747_1144890_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
CP025753.1\|AUP43754.1\|1146309_1147863_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195

Protein	Function_ID	Function_description	E-value
CP025753.1\|AUP43753.1\|1145018_1146236_+\|crotonobetainyl-CoA:carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
CP025753.1\|AUP43742.1\|1132908_1133751_+\|diadenosine-tetraphosphatase	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP025753.1\|AUP43743.1\|1133828_1134419_-\|dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.12644e-127
CP025753.1\|AUP43760.1\|1153333_1154377_-\|carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
CP025753.1\|AUP43748.1\|1138665_1139952_-\|oxidoreductase-FixC	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
CP025753.1\|AUP43741.1\|1132524_1132902_+\|cobalt-transporter	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	3.63315e-76
CP025753.1\|AUP43757.1\|1149438_1149834_-\|transcriptional-regulator	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	2.96175e-74
CP025753.1\|AUP43749.1\|1140002_1140944_-\|protein-fixB	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
CP025753.1\|AUP43747.1\|1138381_1138669_-\|putative-ferredoxin-like-protein-fixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	2.23442e-69
CP025753.1\|AUP43744.1\|1134499_1136362_-\|potassium-transporter	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
CP025753.1\|AUP43751.1\|1142202_1143717_+\|antiporter-putative-transporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
CP025753.1\|AUP43745.1\|1136354_1136885_-\|hypothetical-protein	gnl\|CDD\|234852	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF.	2.99389e-133
CP025753.1\|AUP43756.1\|1148762_1149353_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	2.12106e-142
CP025753.1\|AUP43759.1\|1150094_1153316_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
CP025753.1\|AUP43750.1\|1140958_1141729_-\|electron-transfer-flavoprotein-FixB	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	6.8619e-170
CP025753.1\|AUP43746.1\|1136992_1138324_-\|metabolite-transporter	gnl\|CDD\|340874	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily. This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.4298e-59
CP025753.1\|AUP43755.1\|1147863_1148757_+\|carnitinyl-CoA-dehydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	2.92409e-180
CP025753.1\|AUP43752.1\|1143747_1144890_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
CP025753.1\|AUP43754.1\|1146309_1147863_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0

>CP025753.1|AUP43750.1|1140958_1141729_-|electron-transfer-flavoprotein-FixB
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>CP025753.1|AUP43749.1|1140002_1140944_-|protein-fixB
MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQAIQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>CP025753.1|AUP43748.1|1138665_1139952_-|oxidoreductase-FixC
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>CP025753.1|AUP43747.1|1138381_1138669_-|putative-ferredoxin-like-protein-fixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQVLELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>CP025753.1|AUP43746.1|1136992_1138324_-|metabolite-transporter
MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG
>CP025753.1|AUP43745.1|1136354_1136885_-|hypothetical-protein
MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEWQEAHHG
>CP025753.1|AUP43744.1|1134499_1136362_-|potassium-transporter
MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLGLFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAIPLVAMIPLLATSSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQGSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREADEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTKARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS
>CP025753.1|AUP43743.1|1133828_1134419_-|dihydrofolate-reductase
MDSPAEYKIFLNIILAPVDDGLRFTYSGDNFFYREISMISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
>CP025753.1|AUP43742.1|1132908_1133751_+|diadenosine-tetraphosphatase
MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLGEAAAS
>CP025753.1|AUP43741.1|1132524_1132902_+|cobalt-transporter
MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH
>CP025753.1|AUP43751.1|1142202_1143717_+|antiporter-putative-transporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>CP025753.1|AUP43752.1|1143747_1144890_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>CP025753.1|AUP43753.1|1145018_1146236_+|crotonobetainyl-CoA:carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKARETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLSTPEIPEGTQLIHRIECPYGPLVEEKLDAWLAAHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>CP025753.1|AUP43754.1|1146309_1147863_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLLTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>CP025753.1|AUP43755.1|1147863_1148757_+|carnitinyl-CoA-dehydratase
MKQQGTTLPANNHAIKQYAFFAGMLSSLKKQKWRKGMSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGTEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAVEGPLAFAEKRDPVWKGR
>CP025753.1|AUP43756.1|1148762_1149353_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR
>CP025753.1|AUP43757.1|1149438_1149834_-|transcriptional-regulator
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVAEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>CP025753.1|AUP43758.1|1149868_1150087_+|hypothetical-protein
MTRFEAIKQGHIKIVDISIVCNFTVDKCELNPAYVIKNIDSPKDLLNGQKKRSSSENRITYSIKLADEKYPP
>CP025753.1|AUP43759.1|1150094_1153316_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>CP025753.1|AUP43760.1|1153333_1154377_-|carbamoyl-phosphate-synthase-small-subunit
MTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP025753_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025753_6

2581042-2581181

Orphan

Consensus_repeat	Method
TTTGTATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025753_6

>merge|CP025753|6|2581042-2581181|CRISPRCasFinder
TTTGTATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAACAGCAGTCGGATGCGGCGTAAACACCTTATCTGACCTACGTTTTGTGTCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCA

>CP025753|6|5|2581042-2581181|CRISPRCasFinder
TTTGTATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCA	ACAGCAGTCGGATGCGGCGTAAACACCTTATCTGACCTACGT
TTTGTGTCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCA

Protein	Signature genes	Signature genes Name	Protein_function
CP025753.1\|AUP45146.1\|2581194_2581770_-\|outer-membrane-lipoprotein	unknown	unknown	gnl\|CDD\|182907
CP025753.1\|AUP45136.1\|2573507_2574515_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182505
CP025753.1\|AUP45155.1\|2589411_2590701_-\|fimbrial-usher-protein	unknown	unknown	gnl\|CDD\|225729
CP025753.1\|AUP45138.1\|2575607_2576603_-\|protease	unknown	unknown	gnl\|CDD\|223896
CP025753.1\|AUP45144.1\|2579241_2579877_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187560
CP025753.1\|AUP45143.1\|2578595_2579114_-\|general-stress-protein	unknown	unknown	gnl\|CDD\|153228
CP025753.1\|AUP45139.1\|2576811_2577336_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225696
CP025753.1\|AUP45142.1\|2578172_2578616_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235127
CP025753.1\|AUP45150.1\|2584843_2585704_+\|ribosomal-RNA-small-subunit-methyltransferase-I-domain-protein	unknown	unknown	gnl\|CDD\|184956
CP025753.1\|AUP45145.1\|2579949_2580990_+\|membrane-protein	unknown	unknown	gnl\|CDD\|223773
CP025753.1\|AUP45140.1\|2577329_2577833_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
CP025753.1\|AUP45154.1\|2588970_2589216_-\|transposase	unknown	unknown	gnl\|CDD\|181833
CP025753.1\|AUP45137.1\|2574720_2575599_-\|protease-hypothetical-protein	unknown	unknown	gnl\|CDD\|237968
CP025753.1\|AUP45149.1\|2582742_2584779_-\|penicillin-binding-protein-activator-LpoA	unknown	unknown	gnl\|CDD\|225649
CP025753.1\|AUP45152.1\|2586848_2588123_-\|fimbrial-usher-protein	unknown	unknown	gnl\|CDD\|225729
CP025753.1\|AUP45141.1\|2577819_2578101_-\|GIY-YIG-nuclease-endonuclease	unknown	unknown	gnl\|CDD\|178979
CP025753.1\|AUP45147.1\|2581779_2582370_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182811
CP025753.1\|AUP45151.1\|2585746_2586838_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|366088
CP025753.1\|AUP45153.1\|2588107_2589013_-\|transposase	unknown	unknown	gnl\|CDD\|181829
CP025753.1\|AUP45148.1\|2582389_2582785_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129354

Protein	Function_ID	Function_description	E-value
CP025753.1\|AUP45146.1\|2581194_2581770_-\|outer-membrane-lipoprotein	gnl\|CDD\|182907	PRK11023, PRK11023, divisome-associated lipoprotein YraP.	1.97056e-117
CP025753.1\|AUP45136.1\|2573507_2574515_-\|hypothetical-protein	gnl\|CDD\|182505	PRK10508, PRK10508, luciferase-like monooxygenase.	0
CP025753.1\|AUP45155.1\|2589411_2590701_-\|fimbrial-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	8.88817e-171
CP025753.1\|AUP45138.1\|2575607_2576603_-\|protease	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	4.87234e-118
CP025753.1\|AUP45144.1\|2579241_2579877_+\|hypothetical-protein	gnl\|CDD\|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.89133e-65
CP025753.1\|AUP45143.1\|2578595_2579114_-\|general-stress-protein	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	6.06977e-86
CP025753.1\|AUP45139.1\|2576811_2577336_+\|hypothetical-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	6.78212e-85
CP025753.1\|AUP45142.1\|2578172_2578616_+\|hypothetical-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	2.19601e-100
CP025753.1\|AUP45150.1\|2584843_2585704_+\|ribosomal-RNA-small-subunit-methyltransferase-I-domain-protein	gnl\|CDD\|184956	PRK14994, PRK14994, SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional.	0
CP025753.1\|AUP45145.1\|2579949_2580990_+\|membrane-protein	gnl\|CDD\|223773	COG0701, COG0701, Predicted permeases [General function prediction only].	4.38189e-63
CP025753.1\|AUP45140.1\|2577329_2577833_+\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	5.65062e-64
CP025753.1\|AUP45154.1\|2588970_2589216_-\|transposase	gnl\|CDD\|181833	PRK09413, PRK09413, IS2 repressor TnpA; Reviewed.	8.96795e-42
CP025753.1\|AUP45137.1\|2574720_2575599_-\|protease-hypothetical-protein	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
CP025753.1\|AUP45149.1\|2582742_2584779_-\|penicillin-binding-protein-activator-LpoA	gnl\|CDD\|225649	COG3107, LppC, Putative lipoprotein [General function prediction only].	6.74472e-141
CP025753.1\|AUP45152.1\|2586848_2588123_-\|fimbrial-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	2.54888e-140
CP025753.1\|AUP45141.1\|2577819_2578101_-\|GIY-YIG-nuclease-endonuclease	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	7.66126e-39
CP025753.1\|AUP45147.1\|2581779_2582370_-\|hypothetical-protein	gnl\|CDD\|182811	PRK10886, PRK10886, DnaA initiator-associating protein DiaA; Provisional.	5.61903e-143
CP025753.1\|AUP45151.1\|2585746_2586838_-\|fimbrial-protein	gnl\|CDD\|366088	pfam00419, Fimbrial, Fimbrial protein.	3.34626e-21
CP025753.1\|AUP45153.1\|2588107_2589013_-\|transposase	gnl\|CDD\|181829	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed.	0
CP025753.1\|AUP45148.1\|2582389_2582785_-\|hypothetical-protein	gnl\|CDD\|129354	TIGR00252, UPF0102_protein_HI_1656, TIGR00252 family protein. the scores for Mycobacterium tuberculosis and Treponema pallidum are low considering the alignment [Hypothetical proteins, Conserved].	3.92681e-63

>CP025753.1|AUP45145.1|2579949_2580990_+|membrane-protein
MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWEPYYGKAFTAAETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFSRWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGTVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAVSGVIVGGLALLF
>CP025753.1|AUP45144.1|2579241_2579877_+|hypothetical-protein
MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGVFNPHDPQLTDALAQVTDPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLGAQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNETLFAPLFRLLPGNWKSIDARDVARVMLAESMRPEHEGVTILSSSELRKRAE
>CP025753.1|AUP45143.1|2578595_2579114_-|general-stress-protein
MSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLGA
>CP025753.1|AUP45142.1|2578172_2578616_+|hypothetical-protein
METLIAISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFYILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYNRRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA
>CP025753.1|AUP45141.1|2577819_2578101_-|GIY-YIG-nuclease-endonuclease
MIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD
>CP025753.1|AUP45140.1|2577329_2577833_+|N-acetyltransferase
MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDSFLTLGLVATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEYHEHFNRF
>CP025753.1|AUP45139.1|2576811_2577336_+|hypothetical-protein
MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQALDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRMMLLQLADFVEAGMKTAPETKQTSVGEPC
>CP025753.1|AUP45138.1|2575607_2576603_-|protease
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQNFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ
>CP025753.1|AUP45137.1|2574720_2575599_-|protease-hypothetical-protein
MKYSLGPVLWYWPKETLEEFYQQAATSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA
>CP025753.1|AUP45136.1|2573507_2574515_-|hypothetical-protein
MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPNVRPVPGYGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELLG
>CP025753.1|AUP45146.1|2581194_2581770_-|outer-membrane-lipoprotein
MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGVKRVTTAFTFIK
>CP025753.1|AUP45147.1|2581779_2582370_-|hypothetical-protein
MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD
>CP025753.1|AUP45148.1|2582389_2582785_-|hypothetical-protein
MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGRTTVFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIKDAFNDHS
>CP025753.1|AUP45149.1|2582742_2584779_-|penicillin-binding-protein-activator-LpoA
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQELLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGSPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS
>CP025753.1|AUP45150.1|2584843_2585704_+|ribosomal-RNA-small-subunit-methyltransferase-I-domain-protein
MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIVEGHKAQEEDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG
>CP025753.1|AUP45151.1|2585746_2586838_-|fimbrial-protein
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQAGYYKLNDSLDIKTTLKANDIPGLVTDQTVSVNTRFTQIKSNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNAPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVIVR
>CP025753.1|AUP45152.1|2586848_2588123_-|fimbrial-usher-protein
MSGNIGANPLGALGALSMDINRADTQFDNQHSFHGYQWRTQYIKDIPETNTNIAVSYYRYTNDGYFSFDEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWGNNEKNRNISVGVSGQQWGIGYSLNYQYSRYTDQNNDRALSLNLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHNSSVNASYRSPYGTFSAGYSYGNDSSQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASNDETGQQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQCH
>CP025753.1|AUP45153.1|2588107_2589013_-|transposase
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWKDGRRSRHSDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRIYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFRCDNGEKLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNELPASPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISVMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQQASNGLSDNRCLEI
>CP025753.1|AUP45154.1|2588970_2589216_-|transposase
MAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE
>CP025753.1|AUP45155.1|2589411_2590701_-|fimbrial-usher-protein
MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCITANAEEYYFDPIMLETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLLQPQFTVEQLRELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFNHQRLNLSIPQIALYRDARGYVSPSRWDDGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQTSSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLPMMQRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYSGLLGSEDYYALGIGIGGTLGRLAP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP025753_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025753_7

2626396-2626513

Orphan

Consensus_repeat	Method
TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025753_7

>merge|CP025753|7|2626396-2626513|CRISPRCasFinder
TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGGGTGCTCAACTTGTTGATGTTGTTGTGTTTTGTACCTGATGCCGGATGCGATGCTGGCGCATCTTATCCGGCCTACGGG

>CP025753|7|6|2626396-2626513|CRISPRCasFinder
TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	GTGCTCAACTTGTTGATGTTGTTGTGTTTTGTACCTGA
TGCCGGATGCGATGCTGGCGCATCTTATCCGGCCTACGGG

Protein	Signature genes	Signature genes Name	Protein_function
CP025753.1\|AUP45190.1\|2622066_2623431_+\|L-serine-dehydratase	unknown	unknown	gnl\|CDD\|185000
CP025753.1\|AUP45201.1\|2631705_2632110_-\|membrane-protein	unknown	unknown	gnl\|CDD\|227681
CP025753.1\|AUP45184.1\|2614650_2615589_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|182391
CP025753.1\|AUP45195.1\|2627579_2628476_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176122
CP025753.1\|AUP45202.1\|2632112_2632418_-\|membrane-protein-hypothetical-protein	unknown	unknown	gnl\|CDD\|226941
CP025753.1\|AUP45188.1\|2619297_2621592_+\|keto-acid-formate-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
CP025753.1\|AUP45191.1\|2623705_2625037_+\|membrane-protein-transport-system-permease	unknown	unknown	gnl\|CDD\|273283
CP025753.1\|AUP45196.1\|2628526_2628883_-\|membrane-protein-inner-membrane-protein	unknown	unknown	gnl\|CDD\|225694
CP025753.1\|AUP45197.1\|2629124_2629490_-\|membrane-protein-inner-membrane-protein-YhaH	unknown	unknown	gnl\|CDD\|225694
CP025753.1\|AUP45186.1\|2616698_2618030_+\|serine/threonine-transporter	unknown	unknown	gnl\|CDD\|184191
CP025753.1\|AUP45185.1\|2615687_2616677_+\|threonine-dehydratase	unknown	unknown	gnl\|CDD\|236317
CP025753.1\|AUP45192.1\|2625064_2626375_+\|membrane-protein-hypothetical-protein	unknown	unknown	gnl\|CDD\|226206
CP025753.1\|AUP45200.1\|2631416_2631716_-\|membrane-protein	unknown	unknown	gnl\|CDD\|372871
CP025753.1\|AUP45189.1\|2621605_2621995_+\|endoribonuclease-L-PSP	unknown	unknown	gnl\|CDD\|105214
CP025753.1\|AUP45187.1\|2618055_2619264_+\|propionate/acetate-kinase	unknown	unknown	gnl\|CDD\|183484
CP025753.1\|AUP45183.1\|2614117_2614462_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|236909
CP025753.1\|AUP45193.1\|2626586_2626754_-\|hypothetical-protein	unknown	unknown	unknown
CP025753.1\|AUP45198.1\|2629782_2630769_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223512
CP025753.1\|AUP45199.1\|2630838_2631321_-\|putative-inner-membrane-protein-YqjF	unknown	unknown	gnl\|CDD\|225168
CP025753.1\|AUP45194.1\|2626773_2627424_-\|pirin-hypothetical-protein	unknown	unknown	gnl\|CDD\|224655

Protein	Function_ID	Function_description	E-value
CP025753.1\|AUP45190.1\|2622066_2623431_+\|L-serine-dehydratase	gnl\|CDD\|185000	PRK15040, PRK15040, L-serine ammonia-lyase.	0
CP025753.1\|AUP45201.1\|2631705_2632110_-\|membrane-protein	gnl\|CDD\|227681	COG5393, COG5393, Predicted membrane protein [Function unknown].	2.73939e-60
CP025753.1\|AUP45184.1\|2614650_2615589_+\|transcriptional-regulator	gnl\|CDD\|182391	PRK10341, PRK10341, transcriptional regulator TdcA.	0
CP025753.1\|AUP45195.1\|2627579_2628476_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176122	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold. HupR, a member of the LysR family, activates hupA transcription under low-iron conditions in the presence of hemin. The expression of many iron-uptake genes, such as hupA, is regulated at the transcriptional level by iron and an iron-binding repressor protein called Fur (ferric uptake regulation). Under iron-abundant conditions with heme, the active Fur repressor protein represses transcription of the iron-uptake gene hupA, and prevents transcriptional activation via HupR. Under low-iron conditions with heme, the Fur repressor is inactive and transcription of the hupA is allowed. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.2986e-51
CP025753.1\|AUP45202.1\|2632112_2632418_-\|membrane-protein-hypothetical-protein	gnl\|CDD\|226941	COG4575, ElaB, Uncharacterized conserved protein [Function unknown].	1.46625e-41
CP025753.1\|AUP45188.1\|2619297_2621592_+\|keto-acid-formate-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
CP025753.1\|AUP45191.1\|2623705_2625037_+\|membrane-protein-transport-system-permease	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	2.53913e-167
CP025753.1\|AUP45196.1\|2628526_2628883_-\|membrane-protein-inner-membrane-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	1.64644e-35
CP025753.1\|AUP45197.1\|2629124_2629490_-\|membrane-protein-inner-membrane-protein-YhaH	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	3.68376e-42
CP025753.1\|AUP45186.1\|2616698_2618030_+\|serine/threonine-transporter	gnl\|CDD\|184191	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional.	0
CP025753.1\|AUP45185.1\|2615687_2616677_+\|threonine-dehydratase	gnl\|CDD\|236317	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB.	0
CP025753.1\|AUP45192.1\|2625064_2626375_+\|membrane-protein-hypothetical-protein	gnl\|CDD\|226206	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism].	0
CP025753.1\|AUP45200.1\|2631416_2631716_-\|membrane-protein	gnl\|CDD\|372871	pfam13997, YqjK, YqjK-like protein. The YqjK-like protein family includes the E. coli YqjK protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length. There is a single completely conserved residue R that may be functionally important.	6.11451e-20
CP025753.1\|AUP45189.1\|2621605_2621995_+\|endoribonuclease-L-PSP	gnl\|CDD\|105214	PRK11401, PRK11401, enamine/imine deaminase.	2.43767e-83
CP025753.1\|AUP45187.1\|2618055_2619264_+\|propionate/acetate-kinase	gnl\|CDD\|183484	PRK12379, PRK12379, propionate kinase.	0
CP025753.1\|AUP45183.1\|2614117_2614462_-\|transcriptional-regulator	gnl\|CDD\|236909	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional.	8.0507e-67
CP025753.1\|AUP45199.1\|2630838_2631321_-\|putative-inner-membrane-protein-YqjF	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	2.8408e-29
CP025753.1\|AUP45198.1\|2629782_2630769_-\|hypothetical-protein	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	0
CP025753.1\|AUP45194.1\|2626773_2627424_-\|pirin-hypothetical-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	6.88798e-60

>CP025753.1|AUP45192.1|2625064_2626375_+|membrane-protein-hypothetical-protein
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNGVVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR
>CP025753.1|AUP45191.1|2623705_2625037_+|membrane-protein-transport-system-permease
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS
>CP025753.1|AUP45190.1|2622066_2623431_+|L-serine-dehydratase
MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
>CP025753.1|AUP45189.1|2621605_2621995_+|endoribonuclease-L-PSP
MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA
>CP025753.1|AUP45188.1|2619297_2621592_+|keto-acid-formate-acetyltransferase
MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGDESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIVGLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDLEATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFKAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDGEYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKEDPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREMLLDAIEHPEKYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAL
>CP025753.1|AUP45187.1|2618055_2619264_+|propionate/acetate-kinase
MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAFLSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITDEVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLPWKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLIRRLVMEHLAVLGVVIDTEMNNRSNSFGERIVSSENARVICAVIPTNEEKMIALDAIHLGKVNAPAEFA
>CP025753.1|AUP45186.1|2616698_2618030_+|serine/threonine-transporter
MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLVLKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF
>CP025753.1|AUP45185.1|2615687_2616677_+|threonine-dehydratase
MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA
>CP025753.1|AUP45184.1|2614650_2615589_+|transcriptional-regulator
MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSSYNGCRRRQLIEVG
>CP025753.1|AUP45183.1|2614117_2614462_-|transcriptional-regulator
MTGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSVINNAACHIFSRYLLENKHLFYQYFKISNTCIDHLEQLINVNFFSSDRTSFCECNRFP
>CP025753.1|AUP45193.1|2626586_2626754_-|hypothetical-protein
MMSKKSAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAETRLAEDEATA
>CP025753.1|AUP45194.1|2626773_2627424_-|pirin-hypothetical-protein
MQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVWLHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV
>CP025753.1|AUP45195.1|2627579_2628476_+|LysR-family-transcriptional-regulator
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFSGK
>CP025753.1|AUP45196.1|2628526_2628883_-|membrane-protein-inner-membrane-protein
MQWYLAVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLILGLEFPFLSLIYLAATIIPVIALCVRRLHDTDRSGAWALLYLVPIIGWLVLFVFACLEGNSGSNRYGNDPKFGSN
>CP025753.1|AUP45197.1|2629124_2629490_-|membrane-protein-inner-membrane-protein-YhaH
MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEP
>CP025753.1|AUP45198.1|2629782_2630769_-|hypothetical-protein
MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQNEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDTLGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG
>CP025753.1|AUP45199.1|2630838_2631321_-|putative-inner-membrane-protein-YqjF
MILSIDSNDANTAPLHKKTISSLSGAVESMMKKLEDVGVLVARILMPILFITAGWGKITAYSGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW
>CP025753.1|AUP45200.1|2631416_2631716_-|membrane-protein
MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWNMLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG
>CP025753.1|AUP45201.1|2631705_2632110_-|membrane-protein
MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEKANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIWTLRKSRKSTLLRHTRHELANDRQLLEEESREQ
>CP025753.1|AUP45202.1|2632112_2632418_-|membrane-protein-hypothetical-protein
MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP025753_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025753_8

3055500-3055955

Orphan

I-E

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

7 spacers

The CRISPR arrays of CP025753_8

>merge|CP025753|8|3055500-3055955|PILER-CR,CRISPRCasFinder,CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCGTCCACGCTGTAACGGCCATCATTAAGTTTAGTGAGTTCCCCGCGCCAGCGGGGATAAACCGGCTGATGGTCTGGGAGTGTCCATCGGGCAACTGAGTTCCCCGCGCCAGCGGGGATAAACCGGAAGTAGGCCTGACAGTGATTGAACGCATACTGAGTTCCCCGCGCCAGCGGGGATAAACCGAGTTGGGGCGGCGCAATAACGAGACGATACGCGAGTTCCCCGCGCCAGCGGGGATAAACCGGGGAGTGGCACTTCTGGGGTAGCGGCGGCCCTGAGTTCCCCGCGCCAGCGGGGATAAACCGTCAACGCGCTCAGACGTTGCGTGAGTGAACCAGAGTTCCCCGCGCCAGCGGGGATAAACCGCCCGGAATGCATTCTGAAGGTTTGCTGTATATGAGTTCCCCGCGCCAGCGGGGATAAACCA

>CP025753|8|2|3055500-3055955|PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCCACGCTGTAACGGCCATCATTAAGTTTAGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGATGGTCTGGGAGTGTCCATCGGGCAACT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGTAGGCCTGACAGTGATTGAACGCATACT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTGGGGCGGCGCAATAACGAGACGATACGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGGAGTGGCACTTCTGGGGTAGCGGCGGCCCT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCAACGCGCTCAGACGTTGCGTGAGTGAACCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGGAATGCATTCTGAAGGTTTGCTGTATAT
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>CP025753|8|7|3055500-3055955|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCCACGCTGTAACGGCCATCATTAAGTTTAGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGATGGTCTGGGAGTGTCCATCGGGCAACT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGTAGGCCTGACAGTGATTGAACGCATACT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTGGGGCGGCGCAATAACGAGACGATACGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGGAGTGGCACTTCTGGGGTAGCGGCGGCCCT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCAACGCGCTCAGACGTTGCGTGAGTGAACCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGGAATGCATTCTGAAGGTTTGCTGTATAT
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>CP025753|8|1|3055500-3055955|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCCACGCTGTAACGGCCATCATTAAGTTTAGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGATGGTCTGGGAGTGTCCATCGGGCAACT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGTAGGCCTGACAGTGATTGAACGCATACT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTGGGGCGGCGCAATAACGAGACGATACGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGGAGTGGCACTTCTGGGGTAGCGGCGGCCCT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCAACGCGCTCAGACGTTGCGTGAGTGAACCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGGAATGCATTCTGAAGGTTTGCTGTATAT
GAGTTCCCCGCGCCAGCGGGGATAAACCA

Protein	Signature genes	Signature genes Name	Protein_function
CP025753.1\|AUP45610.1\|3051965_3053264_+\|enolase-phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
CP025753.1\|AUP45622.1\|3064187_3065048_+\|electron-transfer-flavoprotein	unknown	unknown	gnl\|CDD\|224936
CP025753.1\|AUP45604.1\|3044906_3046208_+\|23S-rRNA-m(5)U1939-methyltransferase	unknown	unknown	gnl\|CDD\|237291
CP025753.1\|AUP45609.1\|3050240_3051878_+\|CTP-synthase	unknown	unknown	gnl\|CDD\|235437
CP025753.1\|AUP45620.1\|3062096_3063434_+\|major-facilitator-transporter	unknown	unknown	gnl\|CDD\|340929
CP025753.1\|AUP45623.1\|3065195_3065771_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224865
CP025753.1\|AUP45612.1\|3054209_3054350_-\|hypothetical-protein	unknown	unknown	unknown
CP025753.1\|AUP45613.1\|3054488_3055160_+\|coenzyme-PQQ-biosynthesis-protein	unknown	unknown	gnl\|CDD\|275126
CP025753.1\|AUP45617.1\|3058097_3059375_-\|membrane-protein	unknown	unknown	gnl\|CDD\|349949
CP025753.1\|AUP45618.1\|3059693_3060479_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|187605
CP025753.1\|AUP45608.1\|3049221_3050013_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP025753.1\|AUP45611.1\|3053323_3054196_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224429
CP025753.1\|AUP45616.1\|3056592_3058071_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
CP025753.1\|AUP45606.1\|3048567_3048816_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182082
CP025753.1\|AUP45607.1\|3048815_3049151_+\|toxin-toxin-ChpA	unknown	unknown	gnl\|CDD\|182138
CP025753.1\|AUP45605.1\|3046255_3048490_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
CP025753.1\|AUP45625.1\|3066038_3067310_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
CP025753.1\|AUP45621.1\|3063411_3064191_+\|electron-transfer-flavoprotein-subunit-YgcR	unknown	unknown	gnl\|CDD\|224997
CP025753.1\|AUP45624.1\|3065787_3066048_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225289
CP025753.1\|AUP45619.1\|3060548_3062003_+\|FAD-linked-oxidoreductase	unknown	unknown	gnl\|CDD\|223354

Protein	Function_ID	Function_description	E-value
CP025753.1\|AUP45610.1\|3051965_3053264_+\|enolase-phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP025753.1\|AUP45622.1\|3064187_3065048_+\|electron-transfer-flavoprotein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	6.38228e-89
CP025753.1\|AUP45604.1\|3044906_3046208_+\|23S-rRNA-m(5)U1939-methyltransferase	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
CP025753.1\|AUP45609.1\|3050240_3051878_+\|CTP-synthase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP025753.1\|AUP45620.1\|3062096_3063434_+\|major-facilitator-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.74708e-50
CP025753.1\|AUP45623.1\|3065195_3065771_-\|hypothetical-protein	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
CP025753.1\|AUP45613.1\|3054488_3055160_+\|coenzyme-PQQ-biosynthesis-protein	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.23739e-155
CP025753.1\|AUP45617.1\|3058097_3059375_-\|membrane-protein	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.84544e-29
CP025753.1\|AUP45618.1\|3059693_3060479_+\|oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.14687e-138
CP025753.1\|AUP45608.1\|3049221_3050013_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
CP025753.1\|AUP45611.1\|3053323_3054196_-\|hypothetical-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	5.56011e-100
CP025753.1\|AUP45616.1\|3056592_3058071_-\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.13296e-107
CP025753.1\|AUP45606.1\|3048567_3048816_+\|hypothetical-protein	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
CP025753.1\|AUP45607.1\|3048815_3049151_+\|toxin-toxin-ChpA	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
CP025753.1\|AUP45605.1\|3046255_3048490_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP025753.1\|AUP45625.1\|3066038_3067310_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	2.82789e-125
CP025753.1\|AUP45621.1\|3063411_3064191_+\|electron-transfer-flavoprotein-subunit-YgcR	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	7.46503e-62
CP025753.1\|AUP45624.1\|3065787_3066048_-\|hypothetical-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	3.6328e-41
CP025753.1\|AUP45619.1\|3060548_3062003_+\|FAD-linked-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.25325e-82

>CP025753.1|AUP45613.1|3054488_3055160_+|coenzyme-PQQ-biosynthesis-protein
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVISRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>CP025753.1|AUP45612.1|3054209_3054350_-|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNESKITDAAVNLFIQI
>CP025753.1|AUP45611.1|3053323_3054196_-|hypothetical-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIKVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>CP025753.1|AUP45610.1|3051965_3053264_+|enolase-phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP025753.1|AUP45609.1|3050240_3051878_+|CTP-synthase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>CP025753.1|AUP45608.1|3049221_3050013_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>CP025753.1|AUP45607.1|3048815_3049151_+|toxin-toxin-ChpA
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>CP025753.1|AUP45606.1|3048567_3048816_+|hypothetical-protein
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>CP025753.1|AUP45605.1|3046255_3048490_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>CP025753.1|AUP45604.1|3044906_3046208_+|23S-rRNA-m(5)U1939-methyltransferase
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>CP025753.1|AUP45616.1|3056592_3058071_-|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDAKAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNYFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFMPVESNAKRYDAMNKGIFKDLTRHTDVILKKSYEVMHGELGNADSIQSWSNA
>CP025753.1|AUP45617.1|3058097_3059375_-|membrane-protein
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSIIGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
>CP025753.1|AUP45618.1|3059693_3060479_+|oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAASCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>CP025753.1|AUP45619.1|3060548_3062003_+|FAD-linked-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>CP025753.1|AUP45620.1|3062096_3063434_+|major-facilitator-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>CP025753.1|AUP45621.1|3063411_3064191_+|electron-transfer-flavoprotein-subunit-YgcR
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWRDYLRQRMQP
>CP025753.1|AUP45622.1|3064187_3065048_+|electron-transfer-flavoprotein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLIIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPKVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>CP025753.1|AUP45623.1|3065195_3065771_-|hypothetical-protein
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>CP025753.1|AUP45624.1|3065787_3066048_-|hypothetical-protein
MSVARNLWRVADAPHIVPADSVERQTAERLISACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>CP025753.1|AUP45625.1|3066038_3067310_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERCITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP025753_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025753_9

3083002-3083885

TypeI-E

I-E

Consensus_repeat	Method
TGTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

14 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP025753_9

>merge|CP025753|9|3083002-3083885|CRISPRCasFinder,PILER-CR,CRT
TGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCCCGCGCAATTCCGGGAGCATCCGCAATTGTGTTCCCCGCGCCAGCGGGGATAAACCGACGGACAAAATATATATTGATTTGCGAATTATGTGTTCCCCGCGCCAGCGGGGATAAACCGGTAAAGAAACTGCCGACAAATCCCTGTTCGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCGTCACCGACGCGCAGTGGCGCTACCGTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTACGAACAATTCCTCTGAACCGCCCGCACTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGATCTAACGCGCTGTAAAAATTCCGTGCTTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTAACGCCACATTGGCGGAATTGGCTGCTGATGTGTTCCCCGCGCCAGCGGGGATAAACCATGCGGATTACCGGCAAAACATGGGAGCAAACCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGAACGGCTGGCGAAGCAGGTGGCTGGCGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTTACCGCCCCGCAGAGGCGCTGGCAGATCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGATGACCTGTCGCTAAAACTCGCCGCGTACAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCGTTTGGTCCACCAAATGTTTGATGCTTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCAGGGTGTGATTCCGCATACCAAGCAGTAAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACACCC

>CP025753|9|8|3083002-3083824|CRISPRCasFinder
TGTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCCCGCGCAATTCCGGGAGCATCCGCAAT
TGTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGGACAAAATATATATTGATTTGCGAATTA
TGTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAAAGAAACTGCCGACAAATCCCTGTTCGT
TGTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGTCACCGACGCGCAGTGGCGCTACCGTG
AGTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTACGAACAATTCCTCTGAACCGCCCGCAC
TGTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATCTAACGCGCTGTAAAAATTCCGTGCTT
TGTGTTCCCCGCGCCAGCGGGGATAAACCG	CTAACGCCACATTGGCGGAATTGGCTGCTGA
TGTGTTCCCCGCGCCAGCGGGGATAAACCA	TGCGGATTACCGGCAAAACATGGGAGCAAAC
CGTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAACGGCTGGCGAAGCAGGTGGCTGGCGT
AGTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTTACCGCCCCGCAGAGGCGCTGGCAGATC
CGTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATGACCTGTCGCTAAAACTCGCCGCGTAC
AGTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGTTTGGTCCACCAAATGTTTGATGCTTC
AGTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGGGTGTGATTCCGCATACCAAGCAGTA
AGAGTTCCCCGCGCCAGCGGGGATAAACCG

>CP025753|9|3|3083003-3083824|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCCCGCGCAATTCCGGGAGCATCCGCAATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGGACAAAATATATATTGATTTGCGAATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAAAGAAACTGCCGACAAATCCCTGTTCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGTCACCGACGCGCAGTGGCGCTACCGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTACGAACAATTCCTCTGAACCGCCCGCACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATCTAACGCGCTGTAAAAATTCCGTGCTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTAACGCCACATTGGCGGAATTGGCTGCTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCA	TGCGGATTACCGGCAAAACATGGGAGCAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAACGGCTGGCGAAGCAGGTGGCTGGCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTTACCGCCCCGCAGAGGCGCTGGCAGATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATGACCTGTCGCTAAAACTCGCCGCGTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGTTTGGTCCACCAAATGTTTGATGCTTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGGGTGTGATTCCGCATACCAAGCAGTAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG

>CP025753|9|2|3083003-3083885|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCCCGCGCAATTCCGGGAGCATCCGCAATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGGACAAAATATATATTGATTTGCGAATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAAAGAAACTGCCGACAAATCCCTGTTCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGTCACCGACGCGCAGTGGCGCTACCGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTACGAACAATTCCTCTGAACCGCCCGCACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATCTAACGCGCTGTAAAAATTCCGTGCTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTAACGCCACATTGGCGGAATTGGCTGCTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCA	TGCGGATTACCGGCAAAACATGGGAGCAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAACGGCTGGCGAAGCAGGTGGCTGGCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTTACCGCCCCGCAGAGGCGCTGGCAGATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATGACCTGTCGCTAAAACTCGCCGCGTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGTTTGGTCCACCAAATGTTTGATGCTTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGGGTGTGATTCCGCATACCAAGCAGTAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGCACTGGATGCGATGATGGATATCACTTA
GAATTCCCCGCCCCTGCGGTAGAACACCC

Protein	Signature genes	Signature genes Name	Protein_function
CP025753.1\|AUP45639.1\|3081692_3082616_+\|CRISPR-associated-protein-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP025753.1\|AUP45644.1\|3085194_3086103_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP025753.1\|AUP45646.1\|3087531_3088137_+\|adenylylsulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP025753.1\|AUP45647.1\|3088186_3088510_+\|membrane-protein-DUF3561-family-inner-membrane-protein	unknown	unknown	gnl\|CDD\|371891
CP025753.1\|AUP45636.1\|3079251_3080307_+\|CRISPR-associated-protein-Cse4	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
CP025753.1\|AUP45650.1\|3089743_3090223_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178851
CP025753.1\|AUP45633.1\|3074347_3077047_+\|helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP025753.1\|AUP45631.1\|3072652_3072805_+\|membrane-protein	unknown	unknown	gnl\|CDD\|366840
CP025753.1\|AUP45652.1\|3091249_3092011_+\|stationary-phase-survival-protein-SurE	unknown	unknown	gnl\|CDD\|234732
CP025753.1\|AUP45643.1\|3083905_3084943_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP025753.1\|AUP45638.1\|3081045_3081696_+\|CRISPR-associated-protein-Cas6	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP025753.1\|AUP45640.1\|3082618_3082906_+\|ssRNA-endonuclease	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP025753.1\|AUP45632.1\|3072997_3074110_-\|transposase-DDE-domain-protein	unknown	unknown	gnl\|CDD\|376573
CP025753.1\|AUP45645.1\|3086104_3087532_+\|sulfate-adenylyltransferase-subunit-1	unknown	unknown	gnl\|CDD\|235349
CP025753.1\|AUP45635.1\|3078703_3079240_+\|transposase	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
CP025753.1\|AUP45649.1\|3089033_3089744_+\|ispD	unknown	unknown	gnl\|CDD\|234670
CP025753.1\|AUP45651.1\|3090219_3091269_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234884
CP025753.1\|AUP45648.1\|3088703_3089015_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP025753.1\|AUP45637.1\|3080317_3081064_+\|cytoplasmic-protein	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP025753.1\|AUP45634.1\|3077144_3078707_+\|CRISPR-associated-protein-CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192

Protein	Function_ID	Function_description	E-value
CP025753.1\|AUP45639.1\|3081692_3082616_+\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	6.67486e-158
CP025753.1\|AUP45644.1\|3085194_3086103_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP025753.1\|AUP45646.1\|3087531_3088137_+\|adenylylsulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
CP025753.1\|AUP45647.1\|3088186_3088510_+\|membrane-protein-DUF3561-family-inner-membrane-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
CP025753.1\|AUP45636.1\|3079251_3080307_+\|CRISPR-associated-protein-Cse4	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	5.21697e-155
CP025753.1\|AUP45650.1\|3089743_3090223_+\|hypothetical-protein	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
CP025753.1\|AUP45633.1\|3074347_3077047_+\|helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.23832e-176
CP025753.1\|AUP45631.1\|3072652_3072805_+\|membrane-protein	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
CP025753.1\|AUP45652.1\|3091249_3092011_+\|stationary-phase-survival-protein-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
CP025753.1\|AUP45643.1\|3083905_3084943_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP025753.1\|AUP45638.1\|3081045_3081696_+\|CRISPR-associated-protein-Cas6	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.0289e-91
CP025753.1\|AUP45640.1\|3082618_3082906_+\|ssRNA-endonuclease	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.24092e-63
CP025753.1\|AUP45632.1\|3072997_3074110_-\|transposase-DDE-domain-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.16058e-15
CP025753.1\|AUP45645.1\|3086104_3087532_+\|sulfate-adenylyltransferase-subunit-1	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP025753.1\|AUP45635.1\|3078703_3079240_+\|transposase	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.12087e-29
CP025753.1\|AUP45649.1\|3089033_3089744_+\|ispD	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
CP025753.1\|AUP45651.1\|3090219_3091269_+\|hypothetical-protein	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP025753.1\|AUP45648.1\|3088703_3089015_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
CP025753.1\|AUP45637.1\|3080317_3081064_+\|cytoplasmic-protein	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	5.83917e-49
CP025753.1\|AUP45634.1\|3077144_3078707_+\|CRISPR-associated-protein-CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0

>CP025753.1|AUP45640.1|3082618_3082906_+|ssRNA-endonuclease
MVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>CP025753.1|AUP45639.1|3081692_3082616_+|CRISPR-associated-protein-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>CP025753.1|AUP45638.1|3081045_3081696_+|CRISPR-associated-protein-Cas6
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELRTGQQLCFNLRANPTICKSGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>CP025753.1|AUP45637.1|3080317_3081064_+|cytoplasmic-protein
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTIQMPKEVRKARYFSRREELSDPDLLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>CP025753.1|AUP45636.1|3079251_3080307_+|CRISPR-associated-protein-Cse4
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWAMAEKGTEQPRSLAAAFYEPINGTRQLEVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>CP025753.1|AUP45635.1|3078703_3079240_+|transposase
MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>CP025753.1|AUP45634.1|3077144_3078707_+|CRISPR-associated-protein-CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKDHRRWDDIWEDGLEVEKLREALLSLEHAFQFGPDSPSFMQDFEALTGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKMWLNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQNDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRFVRQIEEGQDADELLSKWNKEIWLFARQDFDERVFTNPYEPVNLERIMTARKKYFTTSAEKQSAKAAREKKQEAAE
>CP025753.1|AUP45633.1|3074347_3077047_+|helicase
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKEGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPEDKAAARDFLLAIKALFPRIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAQAMDIKHYWQKALVQAQNALTVFPPKAETAPFTGINTLFPFIENPTPLQQKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGAEGQQEAPLLGKDDYPWLTHVTKTDVHSHRVATRKEVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVYRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKEDGSQRAGKVLICTQVLEQSVDCDLDEMISDLAPIDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHSARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRARAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGDAFRQWCIEQRQDPEMANVILVTDDESCGYSAMEGLTGKVG
>CP025753.1|AUP45632.1|3072997_3074110_-|transposase-DDE-domain-protein
MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN
>CP025753.1|AUP45631.1|3072652_3072805_+|membrane-protein
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>CP025753.1|AUP45643.1|3083905_3084943_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>CP025753.1|AUP45644.1|3085194_3086103_+|sulfate-adenylyltransferase-subunit-2
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>CP025753.1|AUP45645.1|3086104_3087532_+|sulfate-adenylyltransferase-subunit-1
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEKTFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMAWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFINRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>CP025753.1|AUP45646.1|3087531_3088137_+|adenylylsulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>CP025753.1|AUP45647.1|3088186_3088510_+|membrane-protein-DUF3561-family-inner-membrane-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>CP025753.1|AUP45648.1|3088703_3089015_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>CP025753.1|AUP45649.1|3089033_3089744_+|ispD
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>CP025753.1|AUP45650.1|3089743_3090223_+|hypothetical-protein
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>CP025753.1|AUP45651.1|3090219_3091269_+|hypothetical-protein
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>CP025753.1|AUP45652.1|3091249_3092011_+|stationary-phase-survival-protein-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP025753_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025753_10

3610644-3610785

Orphan

Consensus_repeat	Method
CGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGGCCGGATAAGGCGTTCACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025753_10

>merge|CP025753|10|3610644-3610785|CRISPRCasFinder
CGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGGCCGGATAAGGCGTTCACGCTGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGGCCGGATAAGGCGTTTACGC

>CP025753|10|9|3610644-3610785|CRISPRCasFinder
CGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGGCCGGATAAGGCGTTCACGC	TGCATCCGGCACCCGGAGCCTGATGCGACGCTGG
CGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGGCCGGATAAGGCGTTTACGC

Protein	Signature genes	Signature genes Name	Protein_function
CP025753.1\|AUP46173.1\|3628157_3629807_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227732
CP025753.1\|AUP46161.1\|3607773_3607905_-\|hypothetical-protein	unknown	unknown	unknown
CP025753.1\|AUP46170.1\|3621310_3622999_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227030
CP025753.1\|AUP46159.1\|3605229_3606306_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
CP025753.1\|AUP46162.1\|3608060_3608267_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182050
CP025753.1\|AUP46169.1\|3618534_3621162_+\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
CP025753.1\|AUP46163.1\|3608481_3609132_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182136
CP025753.1\|AUP46157.1\|3603618_3603816_-\|hypothetical-protein	unknown	unknown	unknown
CP025753.1\|AUP46165.1\|3609439_3610609_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
CP025753.1\|AUP46158.1\|3603866_3605225_+\|sn-glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
CP025753.1\|AUP46167.1\|3613833_3617538_+\|adhesin	unknown	unknown	gnl\|CDD\|182059
CP025753.1\|AUP46160.1\|3606524_3607595_-\|hypothetical-protein	unknown	unknown	unknown
CP025753.1\|AUP46168.1\|3617665_3618388_-\|bifunctional-3-demethylubiquinone-9-3-methyltransferase/-2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
CP025753.1\|AUP46175.1\|3630661_3631846_-\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
CP025753.1\|AUP46172.1\|3623642_3628157_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225248
CP025753.1\|AUP46174.1\|3629811_3630588_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227021
CP025753.1\|AUP46156.1\|3601965_3603594_-\|sn-glycerol-3-phosphate-dehydrogenase-subunit-A-sn-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
CP025753.1\|AUP46171.1\|3622995_3623619_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225774
CP025753.1\|AUP46164.1\|3609185_3609440_-\|yfaE	unknown	unknown	gnl\|CDD\|182668
CP025753.1\|AUP46166.1\|3610804_3613090_-\|ribonucleotide-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649

Protein	Function_ID	Function_description	E-value
CP025753.1\|AUP46173.1\|3628157_3629807_+\|hypothetical-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	2.34326e-127
CP025753.1\|AUP46175.1\|3630661_3631846_-\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
CP025753.1\|AUP46170.1\|3621310_3622999_+\|hypothetical-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
CP025753.1\|AUP46159.1\|3605229_3606306_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
CP025753.1\|AUP46163.1\|3608481_3609132_+\|hypothetical-protein	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	1.43283e-158
CP025753.1\|AUP46162.1\|3608060_3608267_-\|hypothetical-protein	gnl\|CDD\|182050	PRK09729, PRK09729, hypothetical protein; Provisional.	1.11661e-35
CP025753.1\|AUP46165.1\|3609439_3610609_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
CP025753.1\|AUP46158.1\|3603866_3605225_+\|sn-glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
CP025753.1\|AUP46167.1\|3613833_3617538_+\|adhesin	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
CP025753.1\|AUP46169.1\|3618534_3621162_+\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
CP025753.1\|AUP46168.1\|3617665_3618388_-\|bifunctional-3-demethylubiquinone-9-3-methyltransferase/-2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.58484e-171
CP025753.1\|AUP46172.1\|3623642_3628157_+\|hypothetical-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
CP025753.1\|AUP46174.1\|3629811_3630588_+\|hypothetical-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	6.03617e-152
CP025753.1\|AUP46156.1\|3601965_3603594_-\|sn-glycerol-3-phosphate-dehydrogenase-subunit-A-sn-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
CP025753.1\|AUP46171.1\|3622995_3623619_+\|hypothetical-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	1.22167e-137
CP025753.1\|AUP46164.1\|3609185_3609440_-\|yfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
CP025753.1\|AUP46166.1\|3610804_3613090_-\|ribonucleotide-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0

>CP025753.1|AUP46165.1|3609439_3610609_-|ribonucleotide-diphosphate-reductase-subunit-beta
MPYPALNSQQDTLMAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL
>CP025753.1|AUP46164.1|3609185_3609440_-|yfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>CP025753.1|AUP46163.1|3608481_3609132_+|hypothetical-protein
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>CP025753.1|AUP46162.1|3608060_3608267_-|hypothetical-protein
MNFIRQGLGIALQPELTLKSIAGELCSVPLESTFYRQISLLAKEKPVEGSPLFLLQTCTEQLVVSGKI
>CP025753.1|AUP46161.1|3607773_3607905_-|hypothetical-protein
MTPGRNRYEAPDSLSKPIVESNDTPANSTQFTLEPFSIFKWDT
>CP025753.1|AUP46160.1|3606524_3607595_-|hypothetical-protein
MPNTSIHLSRCNILQNNKLQPEEVYKESQQTAKLEIFCDEFLKISQSRYGLSTSADSIANLLTFFTKASDAIDRIKTQKIDVHSYGFVPIRHFVEHVITYKNEFAADYEPYTLTFTRGENNEGVLSIESKEGSISQRTINLNEYETAINIINEHVTKENIHNTVQSLTEKDISKINSSDKHHKISSEESIKSQLYSDQKKYADLLLHSEKNTEWYKYASSEERYDKFKNSSKEIKNTYKQIVLAQKKLNQMKYINKLGGELIDIADKKLAPLINDSFSYTRDFFAYSKQENNIFTFDNSKFVDPKEKEGLMIQHSNGQLVITGKYCPEGVQTAFTQEQYDKLIRHINIFFTFPKCE
>CP025753.1|AUP46159.1|3605229_3606306_+|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>CP025753.1|AUP46158.1|3603866_3605225_+|sn-glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>CP025753.1|AUP46157.1|3603618_3603816_-|hypothetical-protein
MGEPAVSLVAAMLRKHSEIKCELPHTLLNKIYKMFRMTHEITFHFRIMSEYARNQTIHVFTMAKW
>CP025753.1|AUP46156.1|3601965_3603594_-|sn-glycerol-3-phosphate-dehydrogenase-subunit-A-sn-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>CP025753.1|AUP46166.1|3610804_3613090_-|ribonucleotide-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINSLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>CP025753.1|AUP46167.1|3613833_3617538_+|adhesin
MIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILHYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>CP025753.1|AUP46168.1|3617665_3618388_-|bifunctional-3-demethylubiquinone-9-3-methyltransferase/-2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>CP025753.1|AUP46169.1|3618534_3621162_+|DNA-gyrase-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>CP025753.1|AUP46170.1|3621310_3622999_+|hypothetical-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETIPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIASDLLSGKKRWQASFGLEERAAEKTPVRQRIVASARLLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>CP025753.1|AUP46171.1|3622995_3623619_+|hypothetical-protein
MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANEALKVHDSKWLKSNGIASQYLPPEMTLKPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWILNDSNPNFIGIYRLNFLAR
>CP025753.1|AUP46172.1|3623642_3628157_+|hypothetical-protein
MGTGLANADDSLPSSNYAPPAGGTFFLLADSSFSSSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVIGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVTLNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVRVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNVPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDPSDINDSLIFDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYARDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEYWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>CP025753.1|AUP46173.1|3628157_3629807_+|hypothetical-protein
MNWRRIVWLLALVTLPTLAEETPLQLALRGAQHDQLYQLSSSGVTKVSALPDTLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVKPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMAAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKKPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>CP025753.1|AUP46174.1|3629811_3630588_+|hypothetical-protein
MRKIFLPLLLVALSPVVHSEGVQEVEIDAPLSGWHPVEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>CP025753.1|AUP46175.1|3630661_3631846_-|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSLHIDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKTLGFDPEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP025753_1	1.1\|145810\|40\|CP025753\|CRISPRCasFinder	145810-145849	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	0	1.0
CP025753_5	5.1\|1141837\|42\|CP025753\|PILER-CR	1141837-1141878	42	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141085-141126	0	1.0
CP025753_5	5.2\|1141896\|40\|CP025753\|PILER-CR	1141896-1141935	40	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141028-141067	1	0.975
CP025753_3	3.1\|908976\|48\|CP025753\|CRISPRCasFinder	908976-909023	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4089-4136	3	0.938
CP025753_3	3.1\|908976\|48\|CP025753\|CRISPRCasFinder	908976-909023	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4088-4135	3	0.938
CP025753_3	3.1\|908976\|48\|CP025753\|CRISPRCasFinder	908976-909023	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4088-4135	3	0.938
CP025753_3	3.1\|908976\|48\|CP025753\|CRISPRCasFinder	908976-909023	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4088-4135	3	0.938
CP025753_9	9.27\|3083825\|32\|CP025753\|CRT	3083825-3083856	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246937-246968	3	0.906
CP025753_6	6.1\|2581091\|42\|CP025753\|CRISPRCasFinder	2581091-2581132	42	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30214-30255	7	0.833
CP025753_9	9.1\|3083032\|31\|CP025753\|CRISPRCasFinder	3083032-3083062	31	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	62682-62712	7	0.774
CP025753_9	9.1\|3083032\|31\|CP025753\|CRISPRCasFinder	3083032-3083062	31	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1222106-1222136	7	0.774
CP025753_9	9.1\|3083032\|31\|CP025753\|CRISPRCasFinder	3083032-3083062	31	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	2467672-2467702	7	0.774
CP025753_9	9.4\|3083215\|31\|CP025753\|CRISPRCasFinder	3083215-3083245	31	NZ_CP034185	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence	17977-18007	7	0.774
CP025753_9	9.9\|3083520\|31\|CP025753\|CRISPRCasFinder	3083520-3083550	31	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	530641-530671	7	0.774
CP025753_9	9.27\|3083825\|32\|CP025753\|CRT	3083825-3083856	32	NZ_CP015038	Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence	112768-112799	7	0.781
CP025753_6	6.1\|2581091\|42\|CP025753\|CRISPRCasFinder	2581091-2581132	42	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24899-24940	8	0.81
CP025753_8	8.6\|3055834\|32\|CP025753\|PILER-CR,CRISPRCasFinder,CRT	3055834-3055865	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1417960-1417991	8	0.75
CP025753_9	9.4\|3083215\|31\|CP025753\|CRISPRCasFinder	3083215-3083245	31	NZ_CP017753	Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence	97498-97528	8	0.742
CP025753_9	9.7\|3083398\|31\|CP025753\|CRISPRCasFinder	3083398-3083428	31	NZ_CP044456	Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence	83495-83525	8	0.742
CP025753_9	9.7\|3083398\|31\|CP025753\|CRISPRCasFinder	3083398-3083428	31	NZ_CP039144	Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence	301179-301209	8	0.742
CP025753_9	9.9\|3083520\|31\|CP025753\|CRISPRCasFinder	3083520-3083550	31	NZ_CP036297	Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence	14953-14983	8	0.742
CP025753_9	9.9\|3083520\|31\|CP025753\|CRISPRCasFinder	3083520-3083550	31	NZ_CP036288	Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence	14983-15013	8	0.742
CP025753_9	9.9\|3083520\|31\|CP025753\|CRISPRCasFinder	3083520-3083550	31	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	3454-3484	8	0.742
CP025753_9	9.9\|3083520\|31\|CP025753\|CRISPRCasFinder	3083520-3083550	31	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	148992-149022	8	0.742
CP025753_9	9.14\|3083032\|32\|CP025753\|PILER-CR,CRT	3083032-3083063	32	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	62682-62713	8	0.75
CP025753_9	9.14\|3083032\|32\|CP025753\|PILER-CR,CRT	3083032-3083063	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1222106-1222137	8	0.75
CP025753_9	9.14\|3083032\|32\|CP025753\|PILER-CR,CRT	3083032-3083063	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	2467671-2467702	8	0.75
CP025753_9	9.14\|3083032\|32\|CP025753\|PILER-CR,CRT	3083032-3083063	32	NC_008759	Polaromonas naphthalenivorans CJ2 plasmid pPNAP03, complete sequence	12670-12701	8	0.75
CP025753_9	9.17\|3083215\|32\|CP025753\|PILER-CR,CRT	3083215-3083246	32	NZ_CP034185	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence	17977-18008	8	0.75
CP025753_9	9.17\|3083215\|32\|CP025753\|PILER-CR,CRT	3083215-3083246	32	NZ_CP017753	Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence	97497-97528	8	0.75
CP025753_9	9.20\|3083398\|32\|CP025753\|PILER-CR,CRT	3083398-3083429	32	NZ_CP044456	Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence	83495-83526	8	0.75
CP025753_9	9.20\|3083398\|32\|CP025753\|PILER-CR,CRT	3083398-3083429	32	NZ_CP039144	Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence	301179-301210	8	0.75
CP025753_9	9.22\|3083520\|32\|CP025753\|PILER-CR,CRT	3083520-3083551	32	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	148991-149022	8	0.75
CP025753_9	9.22\|3083520\|32\|CP025753\|PILER-CR,CRT	3083520-3083551	32	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	530640-530671	8	0.75
CP025753_9	9.23\|3083581\|32\|CP025753\|PILER-CR,CRT	3083581-3083612	32	NZ_CP006991	Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence	532343-532374	8	0.75
CP025753_9	9.25\|3083703\|32\|CP025753\|PILER-CR,CRT	3083703-3083734	32	MK448454	Streptococcus satellite phage Javan361, complete genome	9192-9223	8	0.75
CP025753_9	9.27\|3083825\|32\|CP025753\|CRT	3083825-3083856	32	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1428097-1428128	8	0.75
CP025753_6	6.1\|2581091\|42\|CP025753\|CRISPRCasFinder	2581091-2581132	42	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24786-24827	9	0.786
CP025753_9	9.1\|3083032\|31\|CP025753\|CRISPRCasFinder	3083032-3083062	31	NC_011987	Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence	86182-86212	9	0.71
CP025753_9	9.2\|3083093\|31\|CP025753\|CRISPRCasFinder	3083093-3083123	31	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	244686-244716	9	0.71
CP025753_9	9.2\|3083093\|31\|CP025753\|CRISPRCasFinder	3083093-3083123	31	GU075905	Prochlorococcus phage P-HM2, complete genome	78536-78566	9	0.71
CP025753_9	9.4\|3083215\|31\|CP025753\|CRISPRCasFinder	3083215-3083245	31	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	405875-405905	9	0.71
CP025753_9	9.4\|3083215\|31\|CP025753\|CRISPRCasFinder	3083215-3083245	31	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2248363-2248393	9	0.71
CP025753_9	9.10\|3083581\|31\|CP025753\|CRISPRCasFinder	3083581-3083611	31	NZ_CP040723	Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence	35740-35770	9	0.71
CP025753_9	9.17\|3083215\|32\|CP025753\|PILER-CR,CRT	3083215-3083246	32	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	405875-405906	9	0.719
CP025753_9	9.22\|3083520\|32\|CP025753\|PILER-CR,CRT	3083520-3083551	32	NZ_CP036297	Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence	14953-14984	9	0.719
CP025753_9	9.22\|3083520\|32\|CP025753\|PILER-CR,CRT	3083520-3083551	32	NZ_CP036288	Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence	14983-15014	9	0.719
CP025753_9	9.22\|3083520\|32\|CP025753\|PILER-CR,CRT	3083520-3083551	32	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	3454-3485	9	0.719
CP025753_9	9.23\|3083581\|32\|CP025753\|PILER-CR,CRT	3083581-3083612	32	NZ_CP040723	Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence	35740-35771	9	0.719
CP025753_9	9.27\|3083825\|32\|CP025753\|CRT	3083825-3083856	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	141278-141309	9	0.719
CP025753_10	10.1\|3610698\|34\|CP025753\|CRISPRCasFinder	3610698-3610731	34	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15030-15063	9	0.735
CP025753_8	8.1\|3055529\|32\|CP025753\|PILER-CR,CRISPRCasFinder,CRT	3055529-3055560	32	NZ_CP030933	Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence	51062-51093	10	0.688
CP025753_9	9.14\|3083032\|32\|CP025753\|PILER-CR,CRT	3083032-3083063	32	NC_011987	Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence	86181-86212	10	0.688
CP025753_9	9.15\|3083093\|32\|CP025753\|PILER-CR,CRT	3083093-3083124	32	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	244686-244717	10	0.688
CP025753_9	9.15\|3083093\|32\|CP025753\|PILER-CR,CRT	3083093-3083124	32	GU075905	Prochlorococcus phage P-HM2, complete genome	78536-78567	10	0.688
CP025753_9	9.17\|3083215\|32\|CP025753\|PILER-CR,CRT	3083215-3083246	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2248362-2248393	10	0.688
CP025753_10	10.1\|3610698\|34\|CP025753\|CRISPRCasFinder	3610698-3610731	34	NZ_CP010859	Marinovum algicola DG 898 plasmid pMaD4, complete sequence	3636-3669	10	0.706

1. spacer 1.1|145810|40|CP025753|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 5.1|1141837|42|CP025753|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 0, identity: 1.0

tgtcacacgcagataaatccaactttcaatattgttaagttc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
******************************************

3. spacer 5.2|1141896|40|CP025753|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.975

catggcgtagcaaaaagaaattttcaatattgctttatgg	CRISPR spacer
catggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
********** *****************************

4. spacer 3.1|908976|48|CP025753|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 3, identity: 0.938

tcagcgtcgcatcaggcatctgcgcataaccgccggatgcggcgtaaa	CRISPR spacer
ccagcgtcgcatcaggcatctgcgcataactgccggatgcggcataaa	Protospacer
.*****************************.************.****

5. spacer 3.1|908976|48|CP025753|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 3, identity: 0.938

tcagcgtcgcatcaggcatctgcgcataaccgccggatgcggcgtaaa	CRISPR spacer
ccagcgtcgcatcaggcatctgcgcataactgccggatgcggcataaa	Protospacer
.*****************************.************.****

6. spacer 3.1|908976|48|CP025753|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 3, identity: 0.938

tcagcgtcgcatcaggcatctgcgcataaccgccggatgcggcgtaaa	CRISPR spacer
ccagcgtcgcatcaggcatctgcgcataactgccggatgcggcataaa	Protospacer
.*****************************.************.****

7. spacer 3.1|908976|48|CP025753|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 3, identity: 0.938

tcagcgtcgcatcaggcatctgcgcataaccgccggatgcggcgtaaa	CRISPR spacer
ccagcgtcgcatcaggcatctgcgcataactgccggatgcggcataaa	Protospacer
.*****************************.************.****

8. spacer 9.27|3083825|32|CP025753|CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 3, identity: 0.906

ggcgcactggatgcgatgatggatatcactta	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
*.*********************.*******.

9. spacer 6.1|2581091|42|CP025753|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 7, identity: 0.833

acagcagtcggatgcggcgtaaacaccttatctgacctacgt	CRISPR spacer
acaaatgccggatgcggcgtaaacgccttatctggcctacgc	Protospacer
***.  *.****************.*********.******.

10. spacer 9.1|3083032|31|CP025753|CRISPRCasFinder matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.774

ttgcccgcgcaattccgggagcatccgcaat	CRISPR spacer
tccctatcgcaatgccggcagcatccgcaat	Protospacer
*. *.  ****** **** ************

11. spacer 9.1|3083032|31|CP025753|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.774

ttgcccgcgcaattccgggagcatccgcaat	CRISPR spacer
ttgcgcgcgcaattccgtgagcagcgccatc	Protospacer
**** ************ ***** *  ** .

12. spacer 9.1|3083032|31|CP025753|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

ttgcccgcgcaattccgggagcatccgcaat	CRISPR spacer
ttgcgcgcgcaattccgtgagcagcgccatc	Protospacer
**** ************ ***** *  ** .

13. spacer 9.4|3083215|31|CP025753|CRISPRCasFinder matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

cccgtcaccgacgcgcagtggcgctaccgtg	CRISPR spacer
agcgtcaccgacgcgcagggccgctaccaac	Protospacer
  **************** * *******.

14. spacer 9.9|3083520|31|CP025753|CRISPRCasFinder matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.774

ccgaacggctggcgaagcaggtggctggcgt	CRISPR spacer
ccgaacaggtggcgaagcaggtgatgggcca	Protospacer
******.* **************.. ***

15. spacer 9.27|3083825|32|CP025753|CRT matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcgcactggatgcgatgatggat-atcactta	CRISPR spacer
ggcgcactggctgcgatgaaggacgatcaacc-	Protospacer
********** ******** ***. **** ..

16. spacer 6.1|2581091|42|CP025753|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 8, identity: 0.81

acagcagtcggatgcggcgtaaacaccttatctgacctacgt	CRISPR spacer
attgatgtcggatgcggcgtaaacgccttatccgacctacaa	Protospacer
*. *  ******************.*******.*******.

17. spacer 8.6|3055834|32|CP025753|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcaacgcgctcagacgttgcgtgagtgaacca	CRISPR spacer
acaacgcggtcggacgttgcgtgattaccccg	Protospacer
 ******* **.************ *.  **.

18. spacer 9.4|3083215|31|CP025753|CRISPRCasFinder matches to NZ_CP017753 (Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

cccgtcaccgacgcgcagtggcgctaccgtg	CRISPR spacer
gacgtcaccgacgcgcagtcgcgcttcttca	Protospacer
  ***************** ***** *. ..

19. spacer 9.7|3083398|31|CP025753|CRISPRCasFinder matches to NZ_CP044456 (Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence) position: , mismatch: 8, identity: 0.742

ctaacgccacattggcggaattggctgctga	CRISPR spacer
ttgacgcgacattggctgaattggcttacta	Protospacer
.*.**** ******** *********  . *

20. spacer 9.7|3083398|31|CP025753|CRISPRCasFinder matches to NZ_CP039144 (Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence) position: , mismatch: 8, identity: 0.742

ctaacgccacattggcggaattggctgctga	CRISPR spacer
ttgacgcgacattggctgaattggcttacta	Protospacer
.*.**** ******** *********  . *

21. spacer 9.9|3083520|31|CP025753|CRISPRCasFinder matches to NZ_CP036297 (Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence) position: , mismatch: 8, identity: 0.742

ccgaacggctggcgaagcaggtggctggcgt	CRISPR spacer
agcggcagctggcgatgcaggtggcttgcgt	Protospacer
   ..*.******** ********** ****

22. spacer 9.9|3083520|31|CP025753|CRISPRCasFinder matches to NZ_CP036288 (Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence) position: , mismatch: 8, identity: 0.742

ccgaacggctggcgaagcaggtggctggcgt	CRISPR spacer
agcggcagctggcgatgcaggtggcttgcgt	Protospacer
   ..*.******** ********** ****

23. spacer 9.9|3083520|31|CP025753|CRISPRCasFinder matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 8, identity: 0.742

ccgaacggctggcgaagcaggtggctggcgt	CRISPR spacer
ttgcgcagctggcgcagcaggtggctgccga	Protospacer
..* .*.******* ************ **

24. spacer 9.9|3083520|31|CP025753|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

ccgaacggctggcgaagcaggtggctggcgt	CRISPR spacer
gggtacggctggcgaaggaggcggctgcgga	Protospacer
  * ************* ***.*****  *

25. spacer 9.14|3083032|32|CP025753|PILER-CR,CRT matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ttgcccgcgcaattccgggagcatccgcaatt	CRISPR spacer
tccctatcgcaatgccggcagcatccgcaatc	Protospacer
*. *.  ****** **** ************.

26. spacer 9.14|3083032|32|CP025753|PILER-CR,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

ttgcccgcgcaattccgggagcatccgcaatt	CRISPR spacer
ttgcgcgcgcaattccgtgagcagcgccatca	Protospacer
**** ************ ***** *  ** .

27. spacer 9.14|3083032|32|CP025753|PILER-CR,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ttgcccgcgcaattccgggagcatccgcaatt	CRISPR spacer
ttgcgcgcgcaattccgtgagcagcgccatca	Protospacer
**** ************ ***** *  ** .

28. spacer 9.14|3083032|32|CP025753|PILER-CR,CRT matches to NC_008759 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP03, complete sequence) position: , mismatch: 8, identity: 0.75

ttgcccgcg-----caattccgggagcatccgcaatt	CRISPR spacer
-----cgtgaaactcatttccgggagcatccgcattt	Protospacer
     **.*     ** ***************** **

29. spacer 9.17|3083215|32|CP025753|PILER-CR,CRT matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cccgtcaccgacgcgcagtggcgctaccgtga	CRISPR spacer
agcgtcaccgacgcgcagggccgctaccaact	Protospacer
  **************** * *******.

30. spacer 9.17|3083215|32|CP025753|PILER-CR,CRT matches to NZ_CP017753 (Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cccgtcaccgacgcgcagtggcgctaccgtga	CRISPR spacer
gacgtcaccgacgcgcagtcgcgcttcttcaa	Protospacer
  ***************** ***** *. ..*

31. spacer 9.20|3083398|32|CP025753|PILER-CR,CRT matches to NZ_CP044456 (Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence) position: , mismatch: 8, identity: 0.75

ctaacgccacattggcggaattggctgctgat	CRISPR spacer
ttgacgcgacattggctgaattggcttactat	Protospacer
.*.**** ******** *********  . **

32. spacer 9.20|3083398|32|CP025753|PILER-CR,CRT matches to NZ_CP039144 (Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence) position: , mismatch: 8, identity: 0.75

ctaacgccacattggcggaattggctgctgat	CRISPR spacer
ttgacgcgacattggctgaattggcttactat	Protospacer
.*.**** ******** *********  . **

33. spacer 9.22|3083520|32|CP025753|PILER-CR,CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
gggtacggctggcgaaggaggcggctgcggaa	Protospacer
  * ************* ***.*****  * *

34. spacer 9.22|3083520|32|CP025753|PILER-CR,CRT matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
ccgaacaggtggcgaagcaggtgatgggccag	Protospacer
******.* **************.. ***  .

35. spacer 9.23|3083581|32|CP025753|PILER-CR,CRT matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 8, identity: 0.75

gtttaccgccccgcagaggcgctggcagatcc	CRISPR spacer
catcatcctcccgcagatgcgctggccgatcc	Protospacer
  *.*.* .******** ******** *****

36. spacer 9.25|3083703|32|CP025753|PILER-CR,CRT matches to MK448454 (Streptococcus satellite phage Javan361, complete genome) position: , mismatch: 8, identity: 0.75

tccgtttggtccaccaaatgtttgatgcttca	CRISPR spacer
tcttatcaatccaccaaatttttgattcttca	Protospacer
**.  *...********** ****** *****

37. spacer 9.27|3083825|32|CP025753|CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgcactggatgcgatgatggata---tcactta	CRISPR spacer
ggcgcactggaagcggtgatggaggggcgcac---	Protospacer
*********** ***.******* .    ***

38. spacer 6.1|2581091|42|CP025753|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.786

acagcagtcggatgcggcgtaaacaccttatctgacctacgt	CRISPR spacer
gttgatgtcggatgcggcgtaaacgccttatccgacctacaa	Protospacer
.. *  ******************.*******.*******.

39. spacer 9.1|3083032|31|CP025753|CRISPRCasFinder matches to NC_011987 (Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence) position: , mismatch: 9, identity: 0.71

ttgcccgcgcaattccgggagcatccgcaat	CRISPR spacer
gctaccgcgcaattcgaggagcatccgctgg	Protospacer
 .  *********** .*********** .

40. spacer 9.2|3083093|31|CP025753|CRISPRCasFinder matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

acggacaaaatatatattgatttgcgaatta	CRISPR spacer
tgaggcaaaatatagattgatttccgaaaat	Protospacer
  .*.********* ******** ****

41. spacer 9.2|3083093|31|CP025753|CRISPRCasFinder matches to GU075905 (Prochlorococcus phage P-HM2, complete genome) position: , mismatch: 9, identity: 0.71

acggacaaaatatatattgatttgcgaatta	CRISPR spacer
acggaaaaattatatattgattttacttctg	Protospacer
***** *** *************     .*.

42. spacer 9.4|3083215|31|CP025753|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

cccgtcaccgacgcgcagtggcgctaccgtg	CRISPR spacer
gacgtcactgacgcgcagtcgcgcttcttca	Protospacer
  ******.********** ***** *. ..

43. spacer 9.4|3083215|31|CP025753|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.71

cccgtcaccgacgcgcagtggcgctaccgtg	CRISPR spacer
gacatcaccgacgcccagtggcgcgacgtcc	Protospacer
  *.********** ********* **  .

44. spacer 9.10|3083581|31|CP025753|CRISPRCasFinder matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.71

gtttaccgccccgcagaggcgctggcagatc	CRISPR spacer
cgagaccgcctcgccgaggcgctggcagcga	Protospacer
    ******.*** *************

45. spacer 9.17|3083215|32|CP025753|PILER-CR,CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cccgtcaccgacgcgcagtggcgctaccgtga	CRISPR spacer
gacgtcactgacgcgcagtcgcgcttcttcaa	Protospacer
  ******.********** ***** *. ..*

46. spacer 9.22|3083520|32|CP025753|PILER-CR,CRT matches to NZ_CP036297 (Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
agcggcagctggcgatgcaggtggcttgcgtg	Protospacer
   ..*.******** ********** ****.

47. spacer 9.22|3083520|32|CP025753|PILER-CR,CRT matches to NZ_CP036288 (Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
agcggcagctggcgatgcaggtggcttgcgtg	Protospacer
   ..*.******** ********** ****.

48. spacer 9.22|3083520|32|CP025753|PILER-CR,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
ttgcgcagctggcgcagcaggtggctgccgag	Protospacer
..* .*.******* ************ ** .

49. spacer 9.23|3083581|32|CP025753|PILER-CR,CRT matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

gtttaccgccccgcagaggcgctggcagatcc	CRISPR spacer
cgagaccgcctcgccgaggcgctggcagcgac	Protospacer
    ******.*** *************   *

50. spacer 9.27|3083825|32|CP025753|CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgcactggatgcgatgatggatatcactta	CRISPR spacer
ggcgcactggaaccgatgatggatgcgatgag	Protospacer
***********  ***********.. *.  .

51. spacer 10.1|3610698|34|CP025753|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 9, identity: 0.735

tgcatccggcacccggagcctgatgcgacgctgg	CRISPR spacer
atcaacaattaccaggtgcctgatgcgacgctgg	Protospacer
  ** * . .*** ** *****************

52. spacer 8.1|3055529|32|CP025753|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgctgtaacggccatcattaagtttagt	CRISPR spacer
ccgctgctgtgacgcccatcattaagttactc	Protospacer
.*  .*****.*** *************   .

53. spacer 9.14|3083032|32|CP025753|PILER-CR,CRT matches to NC_011987 (Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence) position: , mismatch: 10, identity: 0.688

ttgcccgcgcaattccgggagcatccgcaatt	CRISPR spacer
gctaccgcgcaattcgaggagcatccgctggg	Protospacer
 .  *********** .*********** .

54. spacer 9.15|3083093|32|CP025753|PILER-CR,CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

acggacaaaatatatattgatttgcgaattat	CRISPR spacer
tgaggcaaaatatagattgatttccgaaaata	Protospacer
  .*.********* ******** ****

55. spacer 9.15|3083093|32|CP025753|PILER-CR,CRT matches to GU075905 (Prochlorococcus phage P-HM2, complete genome) position: , mismatch: 10, identity: 0.688

acggacaaaatatatattgatttgcgaattat	CRISPR spacer
acggaaaaattatatattgattttacttctgg	Protospacer
***** *** *************     .*.

56. spacer 9.17|3083215|32|CP025753|PILER-CR,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.688

cccgtcaccgacgcgcagtggcgctaccgtga	CRISPR spacer
gacatcaccgacgcccagtggcgcgacgtccc	Protospacer
  *.********** ********* **  .

57. spacer 10.1|3610698|34|CP025753|CRISPRCasFinder matches to NZ_CP010859 (Marinovum algicola DG 898 plasmid pMaD4, complete sequence) position: , mismatch: 10, identity: 0.706

tgcatccggcacccggagcctgatgcgacgctgg	CRISPR spacer
tgtcgaaggcacccgcaccctgatgcgacgcgcc	Protospacer
**.    ******** * *************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

23 : 30239

Escherichia_phage(50.0%)

tail,integrase,holin,terminase,capsid,portal

attL 12428:12443|attR 31935:31950

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUP42665.1\|23_2816_-	hypothetical protein	A0A1B5FPE2	Escherichia_phage	0.0e+00	95.2
AUP42666.1\|2861_3068_-\|tail	phage tail protein	A0A1B5FP87	Escherichia_phage	1.4e-31	98.5
AUP42667.1\|3051_3189_-	hypothetical protein	NA	NA	NA	NA
AUP42668.1\|3163_3535_-\|tail	tail assembly protein	A0A1B5FP91	Escherichia_phage	6.5e-64	100.0
AUP42669.1\|3549_4254_-\|tail	tail protein	A0A1B5FP82	Escherichia_phage	1.5e-117	96.2
AUP42670.1\|4313_4538_-	hypothetical protein	A0A1B5FP84	Escherichia_phage	1.0e-32	98.6
AUP42671.1\|4654_5101_-	hypothetical protein	S4TR46	Salmonella_phage	2.3e-63	80.4
AUP42672.1\|5447_5678_-	hypothetical protein	A0A1B5FP86	Escherichia_phage	8.2e-33	100.0
AUP42673.1\|5764_5953_-	hypothetical protein	A0A1B5FP98	Escherichia_phage	7.2e-27	100.0
AUP42674.1\|6004_7210_-\|capsid	capsid protein	U5P0G9	Shigella_phage	1.3e-222	99.0
AUP42675.1\|7224_7875_-	primosome assembly protein PriA	U5P4H2	Shigella_phage	2.5e-119	100.0
AUP42676.1\|7852_9094_-\|portal	portal protein	U5P411	Shigella_phage	5.9e-242	99.5
AUP42677.1\|9093_9276_-	hypothetical protein	A0A1B5FP99	Escherichia_phage	1.1e-24	96.7
AUP42678.1\|9287_11045_-	hypothetical protein	A0A1B5FP96	Escherichia_phage	0.0e+00	99.7
AUP42679.1\|11044_11365_-\|terminase	terminase	A0A1B5FPA0	Escherichia_phage	4.5e-53	100.0
AUP42680.1\|12068_12224_-	hypothetical protein	NA	NA	NA	NA
AUP42681.1\|12265_12643_-	hypothetical protein	Q9MBZ3	Enterobacteria_phage	9.6e-63	96.0
12428:12443	attL	NA	NA	NA	NA
AUP42682.1\|12645_12921_-\|holin	holin	Q9MBZ4	Enterobacteria_phage	5.5e-44	96.7
AUP42683.1\|12910_13303_-\|holin	holin	Q9MBZ5	Enterobacteria_phage	5.9e-55	96.2
AUP42684.1\|13391_13544_-	membrane protein	NA	NA	NA	NA
AUP42685.1\|13540_13966_-	hypothetical protein	Q71TK7	Escherichia_phage	2.3e-60	87.2
AUP42686.1\|14386_14530_-	hypothetical protein	NA	NA	NA	NA
AUP42687.1\|15583_16273_-	antiterminator	I6PDF8	Cronobacter_phage	9.6e-61	51.1
AUP42688.1\|16269_16635_-	endodeoxyribonuclease	V5URS4	Shigella_phage	3.2e-39	67.5
AUP42689.1\|16635_17691_-	hypothetical protein	A0A291AWV9	Escherichia_phage	7.0e-87	47.6
AUP42690.1\|17933_18065_-	hypothetical protein	NA	NA	NA	NA
AUP42691.1\|18100_18358_+	addiction module antidote protein	A0A0N7C055	Escherichia_phage	1.5e-30	86.7
AUP42692.1\|18363_18663_+	plasmid stabilization system protein	A0A2R2Z2Y1	Escherichia_phage	3.9e-51	99.0
AUP42693.1\|18868_18985_-	hypothetical protein	A0A1I9LJU8	Stx_converting_phage	3.2e-09	86.8
AUP42694.1\|19103_19265_-	hypothetical protein	NA	NA	NA	NA
AUP42695.1\|19264_19699_-	hypothetical protein	V5UT79	Shigella_phage	3.3e-35	56.2
AUP42696.1\|19878_20235_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	3.0e-58	98.3
AUP42697.1\|20292_20715_-	hypothetical protein	A0A0U2QQN3	Escherichia_phage	8.8e-65	90.6
AUP42698.1\|20755_21826_-	hypothetical protein	A0A088CD36	Shigella_phage	3.2e-63	65.2
AUP42699.1\|21897_22323_-	Rha family transcriptional regulator	NA	NA	NA	NA
AUP42701.1\|22319_22535_-	transcriptional regulator	NA	NA	NA	NA
AUP42700.1\|22527_23301_+	putative regulator for DicB	H9C160	Pectobacterium_phage	1.0e-55	43.1
AUP42702.1\|23492_23729_+	hypothetical protein	M4QQ57	Salicola_phage	4.6e-07	53.2
AUP42703.1\|23730_23859_+	hypothetical protein	NA	NA	NA	NA
AUP42704.1\|23888_24107_+	phage protein	NA	NA	NA	NA
AUP42705.1\|24129_24537_+	hypothetical protein	A0A2R2Z306	Escherichia_phage	1.0e-09	40.9
AUP42706.1\|24514_24748_-	hypothetical protein	NA	NA	NA	NA
AUP42707.1\|25308_25497_+	regulatory protein	NA	NA	NA	NA
AUP42708.1\|25493_25685_+	hypothetical protein	NA	NA	NA	NA
AUP42709.1\|25778_28250_+	exonuclease	K7PLW7	Enterobacteria_phage	3.8e-59	60.9
AUP42710.1\|28311_28581_+	excisionase	NA	NA	NA	NA
AUP42711.1\|28549_29668_+\|integrase	integrase	Q77Z04	Phage_21	7.7e-84	44.2
AUP42712.1\|29771_30239_-	membrane protein	A0A1B0YZW3	Pseudomonas_phage	2.4e-07	29.5
31935:31950	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1292280 : 1363515

Shigella_phage(26.67%)

integrase,holin,tRNA,transposase

attL 1308174:1308189|attR 1366145:1366160

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUP43911.1\|1292280_1293186_-\|transposase	transposase	Q9ZXG3	Shigella_phage	1.6e-172	96.3
AUP43912.1\|1293143_1293389_-\|transposase	transposase	Q76S41	Shigella_phage	1.3e-36	98.8
AUP43913.1\|1293948_1294086_+	hypothetical protein	NA	NA	NA	NA
AUP43914.1\|1294168_1295782_-\|transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	5.4e-171	61.2
AUP43915.1\|1295812_1296109_-	isocitrate lyase	A0A0P0ZBY2	Stx2-converting_phage	2.2e-30	60.2
AUP43916.1\|1296159_1296594_-\|transposase	transposase putative transposase	Q6H9S5	Enterobacteria_phage	1.5e-19	60.3
AUP43917.1\|1297373_1297943_+	hypothetical protein	NA	NA	NA	NA
AUP43918.1\|1298202_1298604_+	hypothetical protein	NA	NA	NA	NA
AUP43919.1\|1298591_1299026_+	hypothetical protein	NA	NA	NA	NA
AUP43920.1\|1299204_1299333_+	hypothetical protein	NA	NA	NA	NA
AUP43921.1\|1299757_1301290_+\|transposase	transposase putative transposase	A0A0P0ZBS5	Stx2-converting_phage	1.2e-239	81.4
AUP43922.1\|1301528_1302887_-	hypothetical protein	NA	NA	NA	NA
AUP43923.1\|1303265_1303457_+	hypothetical protein	A0A0N7BTS3	Escherichia_phage	2.4e-06	96.2
AUP43924.1\|1303619_1303877_-	hypothetical protein	NA	NA	NA	NA
AUP43925.1\|1304638_1304848_-\|transposase	transposase, IS1 family	U5P0U6	Shigella_phage	2.2e-32	98.6
AUP43926.1\|1304848_1305142_-\|transposase	transposase, IS1 family	U5P0U6	Shigella_phage	4.2e-42	89.0
AUP43927.1\|1305627_1306149_+	RNA polymerase sigma factor	NA	NA	NA	NA
AUP43928.1\|1306145_1307099_+	fec operon regulator FecR	NA	NA	NA	NA
AUP43929.1\|1307185_1309510_+	transporter iron(III) dicitrate TonB-dependent receptor	NA	NA	NA	NA
1308174:1308189	attL	NA	NA	NA	NA
AUP43930.1\|1309554_1310457_+	periplasmic binding protein	NA	NA	NA	NA
AUP43931.1\|1310453_1311452_+	iron ABC transporter	NA	NA	NA	NA
AUP43932.1\|1311448_1312405_+	hypothetical protein	A0A2H4IY97	uncultured_Caudovirales_phage	1.1e-17	26.1
AUP43934.1\|1312437_1312578_-	hypothetical protein	NA	NA	NA	NA
AUP43933.1\|1312561_1313173_+	iron ABC transporter	W6JKT0	Anomala_cuprea_entomopoxvirus	6.6e-05	26.5
AUP43935.1\|1313730_1313988_-	transporter	NA	NA	NA	NA
AUP43936.1\|1314309_1314909_-\|integrase	integrase	S5FNT8	Shigella_phage	5.0e-98	95.5
AUP43937.1\|1314964_1315267_-\|transposase	transposase IS911, transposase orfA	Q716C1	Shigella_phage	1.2e-36	96.5
AUP43938.1\|1315473_1316295_+	carbohydrate transporter	NA	NA	NA	NA
AUP43939.1\|1316873_1317386_+	glycosyl transferase family 1	NA	NA	NA	NA
AUP43940.1\|1317822_1318341_+	hypothetical protein	NA	NA	NA	NA
AUP43941.1\|1318405_1319350_+	lipid A biosynthesis acyltransferase	NA	NA	NA	NA
AUP43942.1\|1319530_1320670_+\|integrase	integrase	A0A0P0I4A4	Acinetobacter_phage	2.7e-68	45.1
AUP43943.1\|1320817_1322821_+\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	7.5e-21	25.9
AUP43944.1\|1322883_1324254_+	hypothetical protein	NA	NA	NA	NA
AUP43945.1\|1324407_1324626_+	TetR family transcriptional regulator	NA	NA	NA	NA
AUP43946.1\|1324676_1325456_-	IstB-like ATP binding protein	A0A2L1IVB6	Escherichia_phage	1.5e-139	100.0
AUP43947.1\|1325455_1326478_-\|transposase	transposase	A0A2L1IVA1	Escherichia_phage	7.8e-200	99.4
AUP43948.1\|1326649_1327024_+	transcriptional regulator	NA	NA	NA	NA
AUP43949.1\|1327081_1327201_-	putative alcohol dehydrogenase	NA	NA	NA	NA
AUP43950.1\|1327204_1327333_-	Protein yhdH	NA	NA	NA	NA
AUP43951.1\|1327423_1327594_-	hypothetical protein	NA	NA	NA	NA
AUP43952.1\|1327714_1329328_-\|transposase	IS66 transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
AUP43953.1\|1329358_1329655_-	isocitrate lyase	A0A0P0ZBY2	Stx2-converting_phage	2.2e-30	63.3
AUP43954.1\|1329705_1330068_-\|transposase	transposase	Q6H9S5	Enterobacteria_phage	5.6e-36	100.0
AUP43955.1\|1330145_1331120_-\|integrase	integrase	Q9ZXG3	Shigella_phage	9.4e-171	96.0
AUP43956.1\|1331077_1331323_-\|transposase	transposase	Q76S41	Shigella_phage	1.3e-36	98.8
AUP43957.1\|1332190_1332307_+	acetolactate synthase	NA	NA	NA	NA
AUP43958.1\|1332407_1333190_-	DeoR family transcriptional regulator	NA	NA	NA	NA
AUP43959.1\|1333495_1334416_+	ribokinase	NA	NA	NA	NA
AUP43960.1\|1334443_1335760_+	sugar:proton symporter	NA	NA	NA	NA
AUP43961.1\|1335771_1336785_+	deoxyribose mutarotase	NA	NA	NA	NA
AUP43962.1\|1337268_1337460_+\|transposase	transposase	Q6H9S5	Enterobacteria_phage	8.3e-15	65.6
AUP43963.1\|1337706_1338963_-	PTS beta-glucoside transporter subunit IIBC	NA	NA	NA	NA
AUP43964.1\|1338975_1339263_-	PTS ascorbate transporter subunit IIB	NA	NA	NA	NA
AUP43965.1\|1339278_1339722_-	PTS ascorbate transporter subunit IIA	NA	NA	NA	NA
AUP43966.1\|1339992_1341024_+	LacI family transcription regulator	C6ZCU4	Enterobacteria_phage	1.4e-18	27.0
AUP43967.1\|1341105_1341243_+\|transposase	transposase hypothetical protein	NA	NA	NA	NA
AUP43968.1\|1341357_1341477_+	hypothetical protein	NA	NA	NA	NA
AUP43969.1\|1341549_1341687_+	hypothetical protein	NA	NA	NA	NA
AUP43970.1\|1341855_1342746_+	hypothetical protein	NA	NA	NA	NA
AUP43971.1\|1342738_1346071_+	ATP-binding protein	NA	NA	NA	NA
AUP43972.1\|1346063_1346903_+	hypothetical protein	A0A0F7L647	uncultured_marine_virus	2.7e-25	34.7
AUP43973.1\|1347051_1348896_-	hypothetical protein	NA	NA	NA	NA
AUP43974.1\|1348898_1351283_-	histidine kinase	NA	NA	NA	NA
AUP43975.1\|1351551_1352805_-\|integrase	integrase	Q7M297	Enterobacteria_phage	3.0e-84	40.9
AUP43976.1\|1353242_1354304_+	alcohol dehydrogenase	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	8.7e-45	29.4
AUP43977.1\|1354433_1355936_+	hypothetical protein	A0A248XCZ8	Klebsiella_phage	2.1e-84	44.8
AUP43978.1\|1356096_1357179_-	lipopolysaccharide ABC transporter permease	NA	NA	NA	NA
AUP43979.1\|1357178_1358186_-	lipopolysaccharide ABC transporter permease LptF	NA	NA	NA	NA
AUP43980.1\|1358192_1358321_+	hypothetical protein	NA	NA	NA	NA
AUP43981.1\|1358545_1360057_+	multifunctional aminopeptidase A	Q6GYZ8	Mycoplasma_phage	6.0e-47	38.0
AUP43982.1\|1360216_1360660_+	DNA polymerase III subunit chi	NA	NA	NA	NA
AUP43983.1\|1360659_1363515_+\|tRNA	valyl-tRNA synthase	A0A1V0SK04	Klosneuvirus	1.8e-140	36.7
1366145:1366160	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2057134 : 2070097

Morganella_phage(30.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUP44628.1\|2057134_2058454_-	hypothetical protein	B6SCW4	Bacteriophage	1.2e-35	43.2
AUP44629.1\|2058453_2059131_-	DNA transfer protein	Q2A0B2	Sodalis_phage	7.0e-56	71.6
AUP44630.1\|2059124_2059586_-	hypothetical protein	Q2A0B3	Sodalis_phage	2.9e-61	71.5
AUP44631.1\|2059602_2059764_-	hypothetical protein	NA	NA	NA	NA
AUP44632.1\|2059946_2060060_+	hypothetical protein	NA	NA	NA	NA
AUP44633.1\|2060348_2063105_-	hypothetical protein	A0A1W6JPG0	Morganella_phage	1.5e-298	57.1
AUP44634.1\|2063455_2063797_-	hypothetical protein	A0A1B5FPL8	Escherichia_phage	2.5e-33	61.5
AUP44635.1\|2063807_2064410_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	2.0e-25	36.3
AUP44636.1\|2064402_2064624_-	hypothetical protein	NA	NA	NA	NA
AUP44637.1\|2064620_2064884_-	hypothetical protein	NA	NA	NA	NA
AUP44638.1\|2065067_2065286_-	hypothetical protein	NA	NA	NA	NA
AUP44639.1\|2065278_2065473_-	fructokinase hypothetical protein	NA	NA	NA	NA
AUP44640.1\|2065874_2065991_+	putative packaging protein gp3	I6S1J2	Salmonella_phage	9.5e-06	74.3
AUP44641.1\|2066303_2067137_-	hypothetical protein	G9L6G1	Escherichia_phage	5.3e-21	47.5
AUP44642.1\|2067149_2067581_-	hypothetical protein	A0A1W6JPH9	Morganella_phage	6.7e-28	49.0
AUP44643.1\|2067580_2067784_-	regulatory protein	NA	NA	NA	NA
AUP44644.1\|2067896_2068742_-	hypothetical protein	NA	NA	NA	NA
AUP44645.1\|2068837_2070097_-	hypothetical protein	A0A1W6JPG6	Morganella_phage	7.9e-194	78.4

DBSCAN-SWA_4

2665473 : 2696414

Shigella_phage(23.08%)

integrase,tRNA,transposase

attL 2681733:2681748|attR 2701726:2701741

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUP45231.1\|2665473_2665806_+\|tRNA	methionyl-tRNA synthetase	NA	NA	NA	NA
AUP45232.1\|2665847_2667137_-	putrescine--2-oxoglutarate aminotransferase	A0A1V0SKB7	Klosneuvirus	4.2e-33	28.6
AUP45233.1\|2667325_2667454_+	hypothetical protein	NA	NA	NA	NA
AUP45234.1\|2667644_2669165_+	aerotaxis receptor	A0A1B0V854	Salmonella_phage	1.5e-34	51.5
AUP45235.1\|2669318_2669942_-	transcriptional regulator	NA	NA	NA	NA
AUP45236.1\|2670229_2670994_+	FMN reductase	NA	NA	NA	NA
AUP45237.1\|2671290_2672607_+\|integrase	integrase	A0A248SL35	Klebsiella_phage	5.0e-34	28.4
AUP45238.1\|2672736_2673333_+	hypothetical protein	A0A1B0VBK8	Salmonella_phage	9.4e-97	87.4
AUP45239.1\|2673415_2674720_-	hypothetical protein	NA	NA	NA	NA
AUP45240.1\|2675288_2675423_+	hypothetical protein	NA	NA	NA	NA
AUP45241.1\|2676091_2676838_+	hypothetical protein	NA	NA	NA	NA
AUP45242.1\|2677119_2677620_+	hypothetical protein	NA	NA	NA	NA
AUP45243.1\|2678008_2678623_+	hypothetical protein	NA	NA	NA	NA
AUP45244.1\|2678926_2679217_+	hypothetical protein	NA	NA	NA	NA
AUP45245.1\|2679331_2679478_+	hypothetical protein	NA	NA	NA	NA
AUP45246.1\|2679516_2680428_-\|integrase	integrase	Q9ZXG3	Shigella_phage	8.8e-171	96.0
AUP45247.1\|2680385_2680751_-\|transposase	transposase IS2	Q76S41	Shigella_phage	9.6e-60	100.0
AUP45248.1\|2680908_2681583_+	hypothetical protein	NA	NA	NA	NA
2681733:2681748	attL	NA	NA	NA	NA
AUP45249.1\|2681778_2681904_+	hypothetical protein	NA	NA	NA	NA
AUP45250.1\|2681999_2682128_-	hypothetical protein	NA	NA	NA	NA
AUP45251.1\|2682273_2682402_+	hypothetical protein	NA	NA	NA	NA
AUP45252.1\|2682487_2682841_+	element, Orf2 protein, IS66 family	A0A0P0ZDM8	Stx2-converting_phage	9.3e-36	73.3
AUP45253.1\|2682860_2684393_+\|transposase	IS66 family element, transposase	A0A0P0ZEB3	Stx2-converting_phage	5.9e-159	56.2
AUP45254.1\|2684615_2684894_+\|transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	3.4e-33	72.1
AUP45255.1\|2685848_2686625_+	hypothetical protein	NA	NA	NA	NA
AUP45256.1\|2687280_2688888_-	type I restriction-modification protein subunit M	A0A2H4PQP4	Staphylococcus_phage	1.7e-100	40.5
AUP45257.1\|2688884_2690045_-	anticodon nuclease	NA	NA	NA	NA
AUP45258.1\|2690041_2691313_-	hypothetical protein	A0A2H4PQP5	Staphylococcus_phage	6.2e-13	24.6
AUP45259.1\|2691494_2694467_-	DEAD/DEAH box helicase	A0A220A398	Liberibacter_phage	4.4e-17	22.1
AUP45260.1\|2695532_2696414_-\|integrase	integrase	Q9ZXG3	Shigella_phage	9.0e-96	61.2
2701726:2701741	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3091249 : 3104431

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUP45652.1\|3091249_3092011_+	stationary phase survival protein SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
AUP45653.1\|3092004_3092631_+	hypothetical protein	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
AUP45654.1\|3092770_3093910_+	lipoprotein NlpD activator of AmiC murein hydrolase activity, lipoprotein	D7RWE0	Brochothrix_phage	1.7e-06	35.6
AUP45655.1\|3094088_3094964_+	RpoS variant	G8CLC7	Synechococcus_phage	5.4e-32	37.6
AUP45656.1\|3095057_3096422_-	transporter	NA	NA	NA	NA
AUP45657.1\|3096510_3097287_-	hypothetical protein	NA	NA	NA	NA
AUP45658.1\|3097291_3097930_-	aldolase putative class II aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
AUP45659.1\|3097926_3099189_-	membrane protein hypothetical protein	A0A077SLJ7	Escherichia_phage	1.3e-135	61.4
AUP45660.1\|3099185_3100094_-	oxidoreductase 6-phosphogluconate dehydrogenase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
AUP45661.1\|3100289_3101057_+	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	3.3e-70	56.7
AUP45662.1\|3101107_3101764_-	serine/threonine protein phosphatase	A0A222YWF0	Escherichia_phage	8.0e-49	46.3
AUP45663.1\|3101869_3104431_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.7e-30	20.6

DBSCAN-SWA_6

3186211 : 3256823

Salmonella_phage(81.82%)

tail,plate,head,terminase,capsid,tRNA,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUP45750.1\|3186211_3187228_-	recombinase	E5G6L0	Salmonella_phage	6.1e-189	93.5
AUP45751.1\|3187230_3187533_-	hypothetical protein	E5G6L1	Salmonella_phage	4.4e-34	95.9
AUP45752.1\|3188110_3188227_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	3.6e-13	97.4
AUP45753.1\|3188259_3188769_+	hypothetical protein	E5G6L3	Salmonella_phage	6.6e-83	94.7
AUP45754.1\|3188776_3189073_+	hypothetical protein	E5G6L4	Salmonella_phage	1.1e-21	93.9
AUP45755.1\|3189190_3189532_+	hypothetical protein	E5G6L5	Salmonella_phage	1.9e-54	96.5
AUP45756.1\|3189599_3189833_+	hypothetical protein	E5G6L6	Salmonella_phage	4.6e-31	94.8
AUP45757.1\|3189832_3190060_+	hypothetical protein	E5G6L7	Salmonella_phage	2.7e-36	100.0
AUP45758.1\|3190056_3190914_+	DNA adenine methylase	E5G6L8	Salmonella_phage	1.8e-157	94.7
AUP45759.1\|3190910_3193325_+	endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.9
AUP45760.1\|3193677_3193911_+	DNA-damage-inducible protein DinI	E5G6M1	Salmonella_phage	4.7e-36	100.0
AUP45761.1\|3194590_3194977_+	hypothetical protein	NA	NA	NA	NA
AUP45762.1\|3195376_3195634_+	hypothetical protein	NA	NA	NA	NA
AUP45763.1\|3195750_3196155_+	hypothetical protein	NA	NA	NA	NA
AUP45764.1\|3196185_3197211_-\|portal	PBSX family phage portal protein	E5G6M3	Salmonella_phage	6.9e-172	88.5
AUP45765.1\|3197210_3198977_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.3
AUP45767.1\|3198986_3199121_-	hypothetical protein	NA	NA	NA	NA
AUP45766.1\|3199119_3199953_+\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	1.5e-121	91.7
AUP45768.1\|3199969_3201028_+\|capsid	capsid protein P2 family phage major capsid protein	E5G6M6	Salmonella_phage	3.8e-181	93.4
AUP45769.1\|3201031_3201682_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	1.9e-111	95.8
AUP45770.1\|3201777_3202242_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.6
AUP45771.1\|3202241_3202445_+\|tail	tail protein X phage tail protein	E5G6M9	Salmonella_phage	1.4e-31	92.5
AUP45772.1\|3202448_3202664_+	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
AUP45773.1\|3202644_3203157_+	glycoside hydrolase	E5G6N1	Salmonella_phage	3.1e-88	92.3
AUP45774.1\|3203158_3203536_+	membrane protein	A0A1S6KZZ2	Salmonella_phage	1.1e-15	39.2
AUP45775.1\|3203532_3203961_+	hypothetical protein	E5G6N2	Salmonella_phage	3.8e-47	77.3
AUP45776.1\|3203920_3204094_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	4.3e-18	73.7
AUP45777.1\|3204056_3204488_+\|tail	tail protein phage tail protein	E5G6N3	Salmonella_phage	4.4e-72	94.4
AUP45778.1\|3204480_3204927_+	virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.3e-63	86.3
AUP45779.1\|3204995_3205574_+\|plate	baseplate assembly protein	A0A1S6KZX7	Salmonella_phage	9.4e-94	86.5
AUP45780.1\|3205570_3205930_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	3.2e-52	87.4
AUP45781.1\|3205916_3206825_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	2.7e-143	90.4
AUP45782.1\|3206817_3207423_+\|tail	tail protein phage tail protein I	A0A1S6L000	Salmonella_phage	7.5e-110	92.0
AUP45783.1\|3207419_3209507_+\|tail	tail fiber protein	A0A0F7LDR4	Escherichia_phage	3.6e-74	42.7
AUP45784.1\|3209506_3209920_+\|tail	tail fiber assembly protein	U5P0S4	Shigella_phage	5.8e-21	73.0
AUP45785.1\|3210026_3211199_+\|tail	tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.0e-203	90.3
AUP45786.1\|3211208_3211724_+\|tail	major tail tube protein	A0A1S6L002	Salmonella_phage	2.1e-89	95.3
AUP45787.1\|3211778_3212081_+	hypothetical protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
AUP45788.1\|3212095_3212215_+\|tail	tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
AUP45789.1\|3212207_3215285_+\|tail	tail protein	E5G6Q1	Salmonella_phage	0.0e+00	69.3
AUP45790.1\|3215281_3215767_+\|tail	tail assembly protein	E5G6Q2	Salmonella_phage	1.8e-66	80.6
AUP45791.1\|3215763_3216864_+	late control protein D	E5G6Q3	Salmonella_phage	3.4e-177	85.5
AUP45792.1\|3216954_3217173_+	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	1.9e-18	71.9
AUP45793.1\|3217434_3217608_+	hypothetical protein	NA	NA	NA	NA
AUP45794.1\|3217576_3218350_+	reverse transcriptase	NA	NA	NA	NA
AUP45795.1\|3219035_3219518_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
AUP45796.1\|3219649_3220126_+	hypothetical protein	NA	NA	NA	NA
AUP45797.1\|3220115_3220406_+	hypothetical protein	NA	NA	NA	NA
AUP45798.1\|3220467_3220809_-	outer membrane biogenesis protein BamE	NA	NA	NA	NA
AUP45799.1\|3220957_3222619_-	DNA repair protein RecN	NA	NA	NA	NA
AUP45800.1\|3222704_3223583_-	inorganic polyphosphate/ATP-NAD kinase	NA	NA	NA	NA
AUP45802.1\|3223579_3223741_-	hypothetical protein	NA	NA	NA	NA
AUP45801.1\|3223705_3224299_+	molecular chaperone GrpE	NA	NA	NA	NA
AUP45803.1\|3224353_3225616_-	membrane protein	NA	NA	NA	NA
AUP45804.1\|3225660_3226527_-	membrane protein hypothetical protein	NA	NA	NA	NA
AUP45805.1\|3226618_3227980_+	Signal recognition particle, subunit Ffh SRP54	NA	NA	NA	NA
AUP45806.1\|3228116_3228365_+	30S ribosomal protein S16	NA	NA	NA	NA
AUP45807.1\|3228380_3228932_+	16S rRNA-processing protein M	NA	NA	NA	NA
AUP45808.1\|3228962_3229730_+	hypothetical protein	NA	NA	NA	NA
AUP45809.1\|3229771_3230119_+	50S ribosomal protein L19	NA	NA	NA	NA
AUP45810.1\|3230194_3230677_-	membrane protein outer membrane lipoprotein	NA	NA	NA	NA
AUP45811.1\|3230692_3231916_-	diguanylate cyclase	NA	NA	NA	NA
AUP45812.1\|3231908_3232427_-	hypothetical protein	NA	NA	NA	NA
AUP45813.1\|3232576_3232942_-	lipoprotein	NA	NA	NA	NA
AUP45814.1\|3233151_3234222_+	phospho-2-dehydro-3-deoxyheptonate aldolase	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.0e-90	51.2
AUP45815.1\|3234232_3235354_+	chorismate mutase bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AUP45816.1\|3235396_3236557_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AUP45817.1\|3236806_3237148_-	hypothetical protein	NA	NA	NA	NA
AUP45818.1\|3237418_3238156_-	lipoprotein	NA	NA	NA	NA
AUP45819.1\|3238290_3239271_+	23S rRNA pseudouridine synthase D	NA	NA	NA	NA
AUP45820.1\|3239267_3239999_+	membrane protein	NA	NA	NA	NA
AUP45821.1\|3240128_3242702_+	protein disaggregation chaperone	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
AUP45822.1\|3242743_3242878_-	hypothetical protein	NA	NA	NA	NA
AUP45823.1\|3248567_3249866_+	alpha-ketoglutarate transporter	Q6JIH2	Burkholderia_virus	1.3e-45	32.2
AUP45824.1\|3249862_3250135_-	lipoprotein putative lipoprotein	NA	NA	NA	NA
AUP45825.1\|3250231_3251587_-	phosphatidylserine synthase	NA	NA	NA	NA
AUP45826.1\|3251700_3254361_-	protein lysine acetyltransferase	NA	NA	NA	NA
AUP45827.1\|3254392_3255091_-	hypothetical protein	NA	NA	NA	NA
AUP45828.1\|3255159_3255579_-	thioredoxin	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
AUP45829.1\|3255785_3256823_+\|tRNA	methyltransferase hypothetical tRNA/rRNA methyltransferase YfiF	NA	NA	NA	NA

DBSCAN-SWA_7

3747169 : 3756610

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUP46285.1\|3747169_3748096_+	ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	30.8
AUP46286.1\|3748100_3748832_+	osmoprotectant uptake system permease	NA	NA	NA	NA
AUP46287.1\|3748979_3749711_-	MerR family transcriptional regulator	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
AUP46288.1\|3749917_3751618_+	sensor histidine kinase	B6DZC2	Enterobacteria_phage	2.4e-307	99.5
AUP46289.1\|3751614_3752334_+	transcriptional regulator	NA	NA	NA	NA
AUP46290.1\|3752380_3752851_+	hypothetical protein	Q9EYF4	Enterobacteria_phage	5.2e-82	100.0
AUP46291.1\|3752890_3753352_-	hypothetical protein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
AUP46292.1\|3753476_3755477_-	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.0
AUP46293.1\|3755473_3756610_-	hypothetical protein	Q9EYF7	Enterobacteria_phage	1.1e-162	97.7

DBSCAN-SWA_8

3849418 : 3856957

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUP46367.1\|3849418_3850813_+	colanic acid biosynthesis protein	A0A291LBB9	Klebsiella_phage	2.8e-19	31.9
AUP46368.1\|3850970_3851966_+	UDP-N-acetylglucosamine 4-epimerase	A0A1V0QG29	Shearwaterpox_virus	1.9e-09	26.3
AUP46369.1\|3852208_3853102_+	UTP--glucose-1-phosphate uridylyltransferase subunit GalU UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.0e-46	42.0
AUP46370.1\|3853474_3854560_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.1e-100	53.9
AUP46371.1\|3854559_3855462_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.4e-29	35.2
AUP46372.1\|3855516_3856395_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	6.6e-107	64.1
AUP46373.1\|3856399_3856957_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.9e-52	58.8

DBSCAN-SWA_9

3886143 : 4059621

194

Escherichia_phage(30.63%)

tail,integrase,holin,terminase,head,capsid,transposase,portal

attL 3923186:3923245|attR 4030331:4031661

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUP46404.1\|3886143_3887166_-\|transposase	transposase	A0A2L1IVA1	Escherichia_phage	3.9e-199	99.1
AUP46405.1\|3887503_3887686_-\|transposase	transposase	NA	NA	NA	NA
AUP46406.1\|3887834_3887975_-	hypothetical protein	NA	NA	NA	NA
AUP46407.1\|3888816_3889020_-	hypothetical protein	NA	NA	NA	NA
AUP46408.1\|3889019_3889394_-	toxin	NA	NA	NA	NA
AUP46409.1\|3889483_3889852_-	antitoxin	NA	NA	NA	NA
AUP46410.1\|3889901_3890015_-	hypothetical protein	NA	NA	NA	NA
AUP46411.1\|3890014_3890236_-	DNA repair protein RadC	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
AUP46412.1\|3890304_3890781_-	hypothetical protein	NA	NA	NA	NA
AUP46413.1\|3890796_3891270_-	hypothetical protein	A9J566	Pseudomonas_phage	3.3e-12	31.2
AUP46414.1\|3891611_3892430_-	hypothetical protein	A0A2C9CX26	Yersinia_phage	4.7e-46	39.3
AUP46415.1\|3892584_3892743_-	hypothetical protein	NA	NA	NA	NA
AUP46416.1\|3892813_3895660_-	hypothetical protein	NA	NA	NA	NA
AUP46417.1\|3896031_3896904_-	hypothetical protein	NA	NA	NA	NA
AUP46418.1\|3896988_3897906_-	hypothetical protein	NA	NA	NA	NA
AUP46419.1\|3898462_3898591_+	hypothetical protein	NA	NA	NA	NA
AUP46420.1\|3898737_3898935_-	hypothetical protein	NA	NA	NA	NA
AUP46421.1\|3899105_3899708_-	aec62	NA	NA	NA	NA
AUP46422.1\|3899802_3900009_-	Rha family transcriptional regulator	NA	NA	NA	NA
AUP46423.1\|3900752_3900893_+	hemolysin activation protein	NA	NA	NA	NA
AUP46424.1\|3901636_3902206_+	hypothetical protein	NA	NA	NA	NA
AUP46425.1\|3902773_3902908_-\|transposase	transposase	NA	NA	NA	NA
AUP46426.1\|3903262_3903742_-\|transposase	transposase	NA	NA	NA	NA
AUP46427.1\|3903927_3904338_+	hypothetical protein	NA	NA	NA	NA
AUP46428.1\|3905143_3905860_+	DNA-binding protein	NA	NA	NA	NA
AUP46429.1\|3905847_3906003_+\|transposase	transposase	NA	NA	NA	NA
AUP46430.1\|3906301_3906421_-	hypothetical protein	NA	NA	NA	NA
AUP46431.1\|3906501_3906615_+	gamma-glutamyltranspeptidase	NA	NA	NA	NA
AUP46432.1\|3906654_3907203_-	phosphotriesterase	NA	NA	NA	NA
AUP46433.1\|3907233_3907485_-	phosphotriesterase	NA	NA	NA	NA
AUP46434.1\|3908332_3908497_+	hypothetical protein	NA	NA	NA	NA
AUP46435.1\|3908687_3908828_+	hypothetical protein	NA	NA	NA	NA
AUP46436.1\|3908961_3909507_+	adenosylcobinamide kinase	NA	NA	NA	NA
AUP46437.1\|3909503_3910247_+	cobalamin synthase	NA	NA	NA	NA
AUP46438.1\|3910258_3911338_+	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
AUP46439.1\|3911402_3912335_+	L,D-transpeptidase	NA	NA	NA	NA
AUP46440.1\|3912791_3913709_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUP46441.1\|3913810_3914761_+	CysB family transcriptional regulator	NA	NA	NA	NA
AUP46442.1\|3915067_3916522_+	MATE family multidrug exporter	NA	NA	NA	NA
AUP46443.1\|3917154_3917871_-	hypothetical protein	NA	NA	NA	NA
AUP46444.1\|3918213_3919668_-	AMP nucleosidase AMP nucleosidase	NA	NA	NA	NA
AUP46445.1\|3919769_3921086_-	shikimate transporter	NA	NA	NA	NA
AUP46446.1\|3921400_3922453_+	hypothetical protein	NA	NA	NA	NA
AUP46447.1\|3922486_3922621_+	hypothetical protein	NA	NA	NA	NA
AUP46448.1\|3922708_3923038_-	autotransporter	NA	NA	NA	NA
3923186:3923245	attL	NA	NA	NA	NA
AUP46449.1\|3923196_3924102_-\|transposase	transposase	Q9ZXG3	Shigella_phage	1.6e-172	96.3
AUP46450.1\|3924059_3924305_-\|transposase	transposase	Q76S41	Shigella_phage	1.3e-36	98.8
AUP46451.1\|3924500_3925874_-	autotransporter	NA	NA	NA	NA
AUP46452.1\|3925909_3926050_-	adhesin	NA	NA	NA	NA
AUP46453.1\|3926006_3926717_-	hypothetical protein	NA	NA	NA	NA
AUP46454.1\|3927408_3929430_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
AUP46455.1\|3929560_3931138_-	salicyl-AMP ligase	NA	NA	NA	NA
AUP46456.1\|3931141_3931945_-	thioesterase yersiniabactin siderophore biosynthetic protein	NA	NA	NA	NA
AUP46457.1\|3931941_3933042_-	oxidoreductase yersiniabactin biosynthetic protein YbtU	NA	NA	NA	NA
AUP46458.1\|3933038_3942530_-	polyketide synthase	D0R7J2	Paenibacillus_phage	1.6e-49	36.8
AUP46459.1\|3942617_3948725_-	peptide synthetase	A0A2K9L3I8	Tupanvirus	4.0e-33	27.3
AUP46460.1\|3948915_3949875_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUP46461.1\|3950131_3951844_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-31	27.0
AUP46462.1\|3951830_3953633_+	ABC transporter permease	W8CYL7	Bacillus_phage	6.1e-22	26.5
AUP46463.1\|3953625_3954906_+	MFS transporter	NA	NA	NA	NA
AUP46464.1\|3954933_3956238_+	salicylate synthase	NA	NA	NA	NA
AUP46465.1\|3956431_3957181_-\|integrase	putative prophage P4 integrase	A0A1B0VMI6	Pseudomonas_phage	1.6e-40	42.0
AUP46466.1\|3957185_3957347_-\|integrase	integrase	A7X7X0	Dichelobacter_phage	1.7e-05	51.3
AUP46467.1\|3957684_3958482_-	DgsA anti-repressor MtfA	NA	NA	NA	NA
AUP46468.1\|3958717_3959743_-\|integrase	integrase	A0A192Y7M7	Salmonella_phage	3.4e-102	57.9
AUP46469.1\|3959742_3959946_-	hypothetical protein	NA	NA	NA	NA
AUP46470.1\|3960004_3962446_-	exodeoxyribonuclease VIII	V5UQJ3	Shigella_phage	1.0e-112	47.0
AUP46471.1\|3962539_3962731_-	hypothetical protein	NA	NA	NA	NA
AUP46472.1\|3962727_3962916_-	cell division inhibition protein DicB	NA	NA	NA	NA
AUP46473.1\|3962932_3963055_+	hypothetical protein	NA	NA	NA	NA
AUP46474.1\|3963483_3963702_-	hypothetical protein	NA	NA	NA	NA
AUP46475.1\|3963731_3963860_-	hypothetical protein	NA	NA	NA	NA
AUP46476.1\|3963861_3964098_-	hypothetical protein	M4QQ57	Salicola_phage	5.1e-06	48.9
AUP46477.1\|3964314_3964734_-	XRE family transcriptional regulator	A0A2I6PIE7	Escherichia_phage	4.2e-19	47.5
AUP46478.1\|3964813_3965068_+	regulatory protein	A0A2I6PIE5	Escherichia_phage	2.8e-18	60.3
AUP46479.1\|3965064_3965490_+	Rha family transcriptional regulator	NA	NA	NA	NA
AUP46480.1\|3965561_3966638_+	hypothetical protein	A0A088CD36	Shigella_phage	1.5e-63	65.7
AUP46481.1\|3966678_3967089_+	hypothetical protein	A0A0U2QQN3	Escherichia_phage	1.2e-63	91.2
AUP46482.1\|3967158_3967515_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	6.7e-58	97.5
AUP46483.1\|3967698_3968010_+	hypothetical protein	A0A0F6R8N3	Escherichia_coli_O157_typing_phage	2.8e-36	87.6
AUP46484.1\|3968448_3968712_+	hypothetical protein	A0A2P0P958	Salmonella_phage	1.5e-30	71.3
AUP46485.1\|3968722_3969067_+	hypothetical protein	A0A2R2Z2X8	Escherichia_phage	7.4e-54	92.1
AUP46486.1\|3969266_3969557_+	hypothetical protein	NA	NA	NA	NA
AUP46487.1\|3969597_3970425_+	hypothetical protein	NA	NA	NA	NA
AUP46488.1\|3971636_3971750_-	hypothetical protein	NA	NA	NA	NA
AUP46489.1\|3972021_3973071_+	hypothetical protein	U5P0K4	Shigella_phage	2.1e-107	54.0
AUP46490.1\|3973083_3973443_+	endodeoxyribonuclease	V5URS4	Shigella_phage	8.3e-40	67.5
AUP46491.1\|3973439_3974129_+	antiterminator	I6PDF8	Cronobacter_phage	5.8e-58	49.8
AUP46492.1\|3974748_3974877_+	hypothetical protein	NA	NA	NA	NA
AUP46493.1\|3975290_3975683_+\|holin	holin	Q9MBZ5	Enterobacteria_phage	3.4e-55	90.0
AUP46494.1\|3975672_3975948_+\|holin	holin	Q9MBZ4	Enterobacteria_phage	7.2e-44	96.7
AUP46495.1\|3975950_3976328_+	hypothetical protein	Q9MBZ3	Enterobacteria_phage	1.3e-64	98.4
AUP46496.1\|3976369_3976522_+	hypothetical protein	NA	NA	NA	NA
AUP46497.1\|3976574_3976709_+	hypothetical protein	NA	NA	NA	NA
AUP46498.1\|3977224_3977398_-	hypothetical protein	NA	NA	NA	NA
AUP46499.1\|3978052_3978373_+\|terminase	terminase	A0A1B5FPA0	Escherichia_phage	1.9e-51	97.2
AUP46500.1\|3978372_3980130_+	hypothetical protein	A0A1B5FP96	Escherichia_phage	0.0e+00	99.7
AUP46501.1\|3980141_3980324_+	hypothetical protein	A0A1B5FP99	Escherichia_phage	1.1e-24	96.7
AUP46502.1\|3980323_3981565_+\|portal	portal protein	U5P411	Shigella_phage	5.9e-242	99.5
AUP46503.1\|3981542_3982193_+	primosome assembly protein PriA	U5P4H2	Shigella_phage	2.5e-119	100.0
AUP46504.1\|3982207_3983413_+\|capsid	capsid protein	U5P0G9	Shigella_phage	1.3e-222	99.0
AUP46505.1\|3983464_3983653_+	hypothetical protein	A0A1B5FP98	Escherichia_phage	2.7e-26	98.4
AUP46506.1\|3983739_3983970_+	hypothetical protein	A0A1B5FP86	Escherichia_phage	3.1e-32	98.5
AUP46507.1\|3984316_3984763_+	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	2.3e-63	81.1
AUP46508.1\|3984879_3985104_+	hypothetical protein	A0A1B5FP84	Escherichia_phage	3.0e-32	97.3
AUP46509.1\|3985164_3985869_+	hypothetical protein	A0A1B5FP82	Escherichia_phage	2.8e-116	94.9
AUP46510.1\|3985883_3986255_+\|tail	tail assembly protein	A0A1B5FP91	Escherichia_phage	6.5e-64	100.0
AUP46511.1\|3986266_3986557_+\|tail	phage tail protein	A0A1B5FP87	Escherichia_phage	1.1e-42	97.8
AUP46512.1\|3986602_3987829_+\|tail	lambda family phage tail tape measure protein	A0A1B5FPE2	Escherichia_phage	4.9e-132	100.0
AUP46513.1\|3987810_3988050_+	hypothetical protein	A0A1B5FPE2	Escherichia_phage	4.7e-31	94.8
AUP46514.1\|3988109_3988436_+	hypothetical protein	A0A1B5FPE2	Escherichia_phage	1.0e-44	99.0
AUP46515.1\|3988583_3989825_+\|tail	lambda family phage tail tape measure protein	A0A1B5FPE2	Escherichia_phage	9.5e-200	94.7
AUP46516.1\|3989817_3990159_+\|tail	tail protein	A0A0P0ZDL9	Stx2-converting_phage	1.8e-39	65.5
AUP46517.1\|3990158_3990857_+\|tail	tail protein	A0A1B5FP81	Escherichia_phage	2.8e-132	97.8
AUP46518.1\|3990861_3991605_+\|tail	putative tail assembly protein	K7PLW1	Enterobacteria_phage	8.6e-148	97.6
AUP46519.1\|3991601_3992144_+	hypothetical protein	A0A291AWV5	Escherichia_phage	2.3e-78	86.3
AUP46520.1\|3992204_3995684_+	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	89.4
AUP46521.1\|3995751_3996351_+	hypothetical protein	A0A0P0ZCF6	Stx2-converting_phage	3.5e-107	96.5
AUP46522.1\|3996351_3996525_-	hypothetical protein	Q6H9T0	Enterobacteria_phage	1.9e-26	100.0
AUP46523.1\|3996912_3997650_-	hypothetical protein	NA	NA	NA	NA
AUP46524.1\|3997685_3997883_+	hypothetical protein	NA	NA	NA	NA
AUP46525.1\|3997888_3998812_+\|tail	phage tail fiber protein	X2KTY7	Enterobacteria_phage	2.2e-28	65.2
AUP46526.1\|3998851_3998965_+	hypothetical protein	NA	NA	NA	NA
AUP46527.1\|3999245_4000079_-	putrescine/spermidine ABC transporter permease	Q6GZ02	Mycoplasma_phage	6.5e-11	28.7
AUP46528.1\|4000092_4001229_-	putrescine/spermidine ABC transporter ATPase	Q6GZ03	Mycoplasma_phage	9.4e-29	39.8
AUP46529.1\|4001207_4001423_-	hypothetical protein	NA	NA	NA	NA
AUP46530.1\|4001478_4002705_+	peptidase T	NA	NA	NA	NA
AUP46531.1\|4002753_4003875_-	hypothetical protein	NA	NA	NA	NA
AUP46532.1\|4003950_4005411_-	sensor protein PhoQ	NA	NA	NA	NA
AUP46533.1\|4005410_4006082_-	PhoP family transcriptional regulator	NA	NA	NA	NA
AUP46534.1\|4006250_4007621_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	44.9
AUP46535.1\|4007624_4008266_-	lysogenization regulator	NA	NA	NA	NA
AUP46536.1\|4008301_4009408_-	hypothetical protein	NA	NA	NA	NA
AUP46537.1\|4009461_4009923_-	phosphatase phosphohydrolase	NA	NA	NA	NA
AUP46538.1\|4009932_4010556_-	23S rRNA pseudouridine synthase E	NA	NA	NA	NA
AUP46539.1\|4010757_4012008_+	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
AUP46540.1\|4012121_4013264_-\|integrase	integrase	O21929	Phage_21	6.2e-206	100.0
AUP46541.1\|4013629_4013869_-	hypothetical protein	M1FPC8	Enterobacteria_phage	3.9e-38	94.9
AUP46542.1\|4013916_4014135_-	conjugal transfer protein TraR	M1FQT7	Enterobacteria_phage	1.7e-35	98.6
AUP46543.1\|4014233_4014449_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.0e-32	100.0
AUP46544.1\|4014525_4015083_-	DNA N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	2.0e-61	62.3
AUP46545.1\|4015233_4015758_-	exonuclease	A0A0N6WET1	Escherichia_phage	2.6e-98	99.4
AUP46546.1\|4015910_4016696_-	recombinase Bet protein	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
AUP46547.1\|4016701_4016998_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	6.8e-48	98.0
AUP46548.1\|4017074_4017281_-	hypothetical protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
AUP46549.1\|4017759_4018272_-	hypothetical protein	NA	NA	NA	NA
AUP46550.1\|4018268_4019408_-	hypothetical protein	NA	NA	NA	NA
AUP46551.1\|4019537_4020023_-	regulatory protein	Q76H56	Enterobacteria_phage	3.1e-74	84.5
AUP46552.1\|4020598_4021138_+	regulator	M9NZI6	Enterobacteria_phage	6.8e-62	66.7
AUP46553.1\|4021134_4022154_+	hypothetical protein	A0A0M5M7Y1	Salmonella_phage	4.0e-111	63.8
AUP46554.1\|4022150_4022864_+	hypothetical protein	G8C7U6	Escherichia_phage	1.7e-108	83.4
AUP46555.1\|4023060_4023177_+	hypothetical protein	NA	NA	NA	NA
AUP46556.1\|4023858_4024362_+\|transposase	transposase IS1 transposase	U5P0U6	Shigella_phage	8.2e-94	98.8
AUP46557.1\|4024372_4024522_-	hypothetical protein	NA	NA	NA	NA
AUP46558.1\|4024786_4025242_+	hypothetical protein	I6PD71	Cronobacter_phage	2.7e-59	66.2
AUP46559.1\|4025404_4025695_+	hypothetical protein	K7PGZ6	Enterobacteria_phage	3.0e-48	95.8
AUP46560.1\|4025691_4026054_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	7.3e-60	96.5
AUP46561.1\|4026053_4026191_+	hypothetical protein	K7PHH3	Enterobacteria_phage	9.2e-08	68.3
AUP46562.1\|4026276_4026660_+	antitermination protein	A0A088CD47	Shigella_phage	4.4e-55	83.3
AUP46563.1\|4026848_4027931_-	outer membrane porin protein C	Q1MVN1	Enterobacteria_phage	8.9e-154	76.3
AUP46564.1\|4028504_4028720_+\|holin	holin	A5LH82	Enterobacteria_phage	9.0e-34	100.0
AUP46565.1\|4028719_4029109_+	lysozyme	A0A291AWW2	Escherichia_phage	1.2e-57	97.3
AUP46566.1\|4029270_4029516_+\|transposase	transposase	Q76S41	Shigella_phage	1.3e-36	98.8
AUP46567.1\|4029473_4030379_+\|transposase	transposase	Q9ZXG3	Shigella_phage	1.6e-172	96.3
AUP46568.1\|4030549_4031011_+	endopeptidase	A0A0K2FJD0	Enterobacteria_phage	1.0e-74	97.4
AUP46569.1\|4031042_4031336_-	hypothetical protein	K7PL54	Enterobacteria_phage	2.0e-44	91.8
AUP46570.1\|4032281_4032827_+	protein convertase	A0A0K2FIG2	Enterobacteria_phage	2.8e-95	100.0
4030331:4031661	attR	NA	NA	NA	NA
AUP46571.1\|4032801_4034727_+\|terminase	terminase putative packaging protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.7
AUP46572.1\|4034723_4034930_+\|head,tail	head-tail joining protein	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
AUP46573.1\|4034926_4036528_+	plasmid partitioning protein ParB	A0A0K2FJC0	Enterobacteria_phage	1.1e-309	99.2
AUP46574.1\|4036508_4037828_+\|capsid	capsid assembly protein	A0A2I6TC87	Escherichia_phage	4.5e-232	98.2
AUP46575.1\|4037837_4038170_+\|head	bacteriophage lambda head decoration protein D	A0A2R9YJN3	Escherichia_phage	1.7e-55	100.0
AUP46576.1\|4038225_4039251_+\|head	head protein	C6ZCY2	Enterobacteria_phage	1.7e-191	99.1
AUP46577.1\|4039292_4039688_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	1.1e-58	95.5
AUP46578.1\|4039699_4040053_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	1.2e-62	99.1
AUP46579.1\|4040064_4040643_+\|tail	tail protein	A0A2R9YJK4	Escherichia_phage	7.8e-80	99.0
AUP46580.1\|4040639_4041035_+	hypothetical protein	A0A0K2FIF4	Enterobacteria_phage	1.0e-70	100.0
AUP46581.1\|4041042_4041783_+\|tail	tail protein	A0A0K2FJ05	Enterobacteria_phage	9.5e-131	98.4
AUP46582.1\|4041798_4042221_+\|tail	tail protein	A0A0K2FIQ8	Enterobacteria_phage	3.8e-68	94.3
AUP46583.1\|4042202_4042637_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
AUP46584.1\|4042629_4044090_+\|tail	tail protein	A0A2R9YJM8	Escherichia_phage	1.8e-245	93.8
AUP46585.1\|4044150_4045209_+\|tail	tail protein	A0A2R9YJM8	Escherichia_phage	3.8e-165	93.8
AUP46586.1\|4045205_4045535_+\|tail	tail protein	A0A2R9YJM0	Escherichia_phage	4.7e-58	98.2
AUP46587.1\|4045534_4046233_+\|tail	tail protein	A5LH40	Enterobacteria_phage	1.1e-128	96.1
AUP46588.1\|4046381_4046981_+	endopeptidase	C6ZCZ3	Enterobacteria_phage	1.1e-121	99.5
AUP46589.1\|4046977_4047550_+\|tail	phage tail protein	A0A0K2FJB0	Escherichia_phage	6.3e-82	97.9
AUP46590.1\|4047610_4049794_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	99.0
AUP46591.1\|4049983_4051024_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	2.6e-195	98.0
AUP46592.1\|4051094_4051694_+	hypothetical protein	K7PJP9	Enterobacteria_phage	6.7e-111	99.5
AUP46593.1\|4051694_4051868_-	hypothetical protein	Q6H9T0	Enterobacteria_phage	2.8e-25	96.5
AUP46594.1\|4051908_4055034_+\|tail	tail fiber protein	K7PGT9	Enterobacteria_phage	5.5e-281	70.9
AUP46595.1\|4055216_4055333_-	hypothetical protein	NA	NA	NA	NA
AUP46596.1\|4055509_4056598_-	acyltransferase	A0A2H4JA46	uncultured_Caudovirales_phage	1.1e-15	28.0
AUP46597.1\|4057803_4059621_+	ATPase AAA	K4I1H4	Acidithiobacillus_phage	7.0e-26	28.6

DBSCAN-SWA_10

4463380 : 4522602

Enterobacteria_phage(47.62%)

protease,tail,transposase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUP46974.1\|4463380_4463539_+	hypothetical protein	A0A192Y6D5	Salmonella_phage	3.0e-18	84.6
AUP46975.1\|4463856_4464447_+	hypothetical protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
AUP46976.1\|4464544_4465120_-\|tail	tail assembly protein	K7PMH7	Enterobacteria_phage	2.0e-104	96.9
AUP46977.1\|4465119_4466778_-	membrane protein	U5N099	Enterobacteria_phage	8.8e-76	56.9
AUP46978.1\|4466738_4466873_-	hypothetical protein	NA	NA	NA	NA
AUP46979.1\|4466908_4467646_+	hypothetical protein	NA	NA	NA	NA
AUP46980.1\|4468033_4468207_+	hypothetical protein	Q6H9T0	Enterobacteria_phage	1.9e-26	100.0
AUP46981.1\|4468207_4468807_-	hypothetical protein	A0A0P0ZCF6	Stx2-converting_phage	1.3e-109	97.5
AUP46982.1\|4468873_4472272_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	88.6
AUP46983.1\|4472332_4472881_-\|tail	bacteriophage lambda tail assembly protein I	A0A291AWV5	Escherichia_phage	1.1e-94	100.0
AUP46984.1\|4472877_4473513_-	endopeptidase	A0A0K2FIQ5	Escherichia_phage	8.4e-128	98.6
AUP46985.1\|4473626_4474325_-\|tail	tail protein putative minor tail protein	A5LH40	Enterobacteria_phage	6.0e-135	100.0
AUP46986.1\|4474334_4474664_-\|tail	tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
AUP46987.1\|4474663_4477729_-\|tail	tail protein	A0A291AWX1	Escherichia_phage	0.0e+00	99.1
AUP46988.1\|4477700_4477976_-\|tail	tail protein minor tail protein	A5LH37	Enterobacteria_phage	1.3e-45	100.0
AUP46989.1\|4478038_4478425_-\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	2.2e-62	96.9
AUP46990.1\|4478485_4479229_-\|tail	tail protein	A0A291AWU6	Escherichia_phage	3.6e-130	97.6
AUP46991.1\|4479239_4479641_-\|tail	tail protein tail component of prophage	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
AUP46992.1\|4479637_4480216_-\|tail	tail protein	A5LH33	Enterobacteria_phage	1.2e-101	99.5
AUP46993.1\|4480227_4480503_-	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	8.6e-45	98.9
AUP46994.1\|4480495_4480819_-	hypothetical protein	K7PLV6	Enterobacteria_phage	9.4e-51	99.1
AUP46995.1\|4480905_4482864_-	peptidase S14	A5LH30	Enterobacteria_phage	0.0e+00	99.4
AUP46996.1\|4482910_4484386_-\|capsid	capsid protein	K7PJP3	Enterobacteria_phage	6.2e-283	99.6
AUP46997.1\|4484385_4484598_-	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
AUP46998.1\|4484594_4486526_-	DNA packaging protein	A5LH27	Enterobacteria_phage	0.0e+00	98.4
AUP46999.1\|4486702_4487005_-	hypothetical protein	A5LH26	Enterobacteria_phage	3.5e-47	100.0
AUP47000.1\|4487275_4487395_-	membrane protein	NA	NA	NA	NA
AUP47001.1\|4487810_4488017_-	phage protein	A0A0K2FJ18	Enterobacteria_phage	6.7e-26	91.2
AUP47002.1\|4488879_4489053_-	hypothetical protein	NA	NA	NA	NA
AUP47003.1\|4489726_4489939_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
AUP47004.1\|4490302_4490785_-	hypothetical protein	A0A291LBG9	Klebsiella_phage	2.8e-06	29.9
AUP47005.1\|4490796_4491330_-	hypothetical protein	K7PLY1	Enterobacteria_phage	6.4e-97	93.2
AUP47006.1\|4491326_4491638_-	hypothetical protein	K7PGU6	Enterobacteria_phage	2.0e-26	64.6
AUP47007.1\|4491642_4491849_-	hypothetical protein	A5LH82	Enterobacteria_phage	4.5e-30	94.1
AUP47008.1\|4492611_4492827_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.4e-25	76.5
AUP47009.1\|4493127_4493340_+	cold-shock protein	NA	NA	NA	NA
AUP47010.1\|4493574_4493730_-	hypothetical protein	NA	NA	NA	NA
AUP47011.1\|4493761_4494514_-	antitermination protein	A0A192Y5X6	Salmonella_phage	7.1e-134	92.8
AUP47012.1\|4494527_4495577_-	hypothetical protein	A0A291AWV9	Escherichia_phage	1.3e-112	57.3
AUP47013.1\|4495923_4496175_-	hypothetical protein	NA	NA	NA	NA
AUP47014.1\|4496236_4496353_-	hypothetical protein	NA	NA	NA	NA
AUP47015.1\|4496905_4497145_-	bifunctional antitoxin/transcriptional repressor RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
AUP47016.1\|4497677_4498010_+	protein flxA hypothetical protein	NA	NA	NA	NA
AUP47017.1\|4498446_4499787_-\|transposase	transposase	NA	NA	NA	NA
AUP47018.1\|4500280_4501246_-	hypothetical protein	U5P0A0	Shigella_phage	1.7e-55	61.2
AUP47019.1\|4501226_4501688_-	hypothetical protein	NA	NA	NA	NA
AUP47020.1\|4501731_4501959_-	transcriptional regulator	NA	NA	NA	NA
AUP47021.1\|4502309_4502444_+	transcriptional regulator	NA	NA	NA	NA
AUP47022.1\|4502635_4502791_+	hypothetical protein	M4QQ57	Salicola_phage	8.8e-07	51.1
AUP47023.1\|4502792_4503368_+	hypothetical protein	NA	NA	NA	NA
AUP47024.1\|4503854_4504043_+	regulatory protein	NA	NA	NA	NA
AUP47025.1\|4504217_4505123_-\|transposase	transposase	Q9ZXG3	Shigella_phage	1.6e-172	96.3
AUP47026.1\|4505080_4505326_-\|transposase	transposase	Q76S41	Shigella_phage	1.3e-36	98.8
AUP47027.1\|4505628_4505970_+	hypothetical protein	NA	NA	NA	NA
AUP47028.1\|4506004_4506565_+	spermidine N1-acetyltransferase	NA	NA	NA	NA
AUP47029.1\|4506567_4507191_-	hypothetical protein	NA	NA	NA	NA
AUP47030.1\|4507385_4507691_+	membrane protein	NA	NA	NA	NA
AUP47031.1\|4507889_4510316_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	7.7e-214	49.0
AUP47032.1\|4510373_4512800_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	3.1e-207	48.4
AUP47033.1\|4512810_4513428_+	dimethyl sulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	9.5e-76	59.6
AUP47034.1\|4513429_4514284_+	oxidoreductase, membrane subunit	NA	NA	NA	NA
AUP47035.1\|4514326_4514941_+	hypothetical protein	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
AUP47036.1\|4515135_4516392_+	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA
AUP47037.1\|4516344_4517040_-	dithiobiotin synthetase	NA	NA	NA	NA
AUP47038.1\|4517164_4518385_-	transcriptional regulator	NA	NA	NA	NA
AUP47039.1\|4518519_4519413_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUP47040.1\|4519519_4520773_+	membrane protein putative arabinose efflux transporter	NA	NA	NA	NA
AUP47041.1\|4520821_4520941_-	hypothetical protein	NA	NA	NA	NA
AUP47042.1\|4521169_4521505_+	acid-shock protein	NA	NA	NA	NA
AUP47043.1\|4521780_4522602_+\|protease	serine protease hypothetical protein	NA	NA	NA	NA

DBSCAN-SWA_11

4901277 : 4930956

Escherichia_phage(35.0%)

tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUP47431.1\|4901277_4902954_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.3e-18	35.6
AUP47432.1\|4903209_4903392_-	hypothetical protein	NA	NA	NA	NA
AUP47433.1\|4903470_4904382_-	membrane protein hypothetical protein	NA	NA	NA	NA
AUP47434.1\|4904560_4905481_+	multidrug transporter	NA	NA	NA	NA
AUP47435.1\|4905469_4905940_-	very short patch repair endonuclease	E5E3X5	Burkholderia_phage	1.8e-34	49.0
AUP47436.1\|4905920_4907339_-	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	4.0e-101	54.8
AUP47437.1\|4907405_4907834_-	hydrolase	NA	NA	NA	NA
AUP47438.1\|4908092_4908596_+\|transposase	transposase, IS1 family	U5P0U6	Shigella_phage	3.1e-85	93.8
AUP47439.1\|4908652_4910011_-	sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	5.1e-05	19.4
AUP47440.1\|4910010_4910793_-	transcriptional regulator	W8CYM9	Bacillus_phage	4.8e-32	35.2
AUP47441.1\|4910814_4911228_+	hydroxyisourate hydrolase	NA	NA	NA	NA
AUP47442.1\|4911336_4912341_+	TMAO/DMSO reductase	NA	NA	NA	NA
AUP47443.1\|4912341_4912977_+	sulfite oxidase subunit YedZ	NA	NA	NA	NA
AUP47444.1\|4913233_4913884_+	zinc/cadmium-binding protein	NA	NA	NA	NA
AUP47445.1\|4915653_4917786_-\|tail	tail fiber protein	K7PGT9	Enterobacteria_phage	3.8e-241	59.0
AUP47446.1\|4917964_4918432_+	hypothetical protein	NA	NA	NA	NA
AUP47447.1\|4918819_4918993_+	hypothetical protein	Q6H9T0	Enterobacteria_phage	2.8e-25	96.5
AUP47448.1\|4918993_4919593_-	hypothetical protein	A0A0P0ZCF6	Stx2-converting_phage	4.8e-109	97.0
AUP47449.1\|4919661_4923057_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	89.9
AUP47450.1\|4923117_4923630_-\|tail	tail protein	K7PH50	Enterobacteria_phage	5.4e-85	95.9
AUP47451.1\|4923662_4924406_-\|tail	tail protein	K7PLW1	Enterobacteria_phage	6.4e-143	93.1
AUP47452.1\|4924410_4925109_-\|tail	tail protein	A0A1B5FP81	Escherichia_phage	4.4e-130	96.6
AUP47453.1\|4925108_4925450_-\|tail	tail protein	A0A0P0ZDL9	Stx2-converting_phage	6.0e-40	65.5
AUP47454.1\|4925442_4928670_-\|tail	lambda family phage tail tape measure protein	A0A1B5FPE2	Escherichia_phage	0.0e+00	95.7
AUP47455.1\|4928715_4929006_-\|tail	phage tail protein	A0A1B5FP87	Escherichia_phage	1.1e-42	97.8
AUP47456.1\|4929017_4929389_-\|tail	tail assembly protein	A0A1B5FP91	Escherichia_phage	6.5e-64	100.0
AUP47457.1\|4929403_4930108_-	hypothetical protein	A0A1B5FP82	Escherichia_phage	2.8e-116	94.9
AUP47458.1\|4930168_4930393_-	hypothetical protein	A0A1B5FP84	Escherichia_phage	3.0e-32	97.3
AUP47459.1\|4930509_4930956_-	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	2.3e-63	81.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP025752

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1457 : 53671

Escherichia_phage(41.18%)

transposase,integrase

attL 23930:23989|attR 54249:54447

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUP42588.1\|1457_3071_-\|transposase	IS66 transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
AUP42589.1\|3101_3452_-	isocitrate lyase hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
AUP42590.1\|3448_3874_-\|transposase	IS66 transposase	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
AUP42591.1\|3944_4082_-	hypothetical protein	NA	NA	NA	NA
AUP42592.1\|4384_5110_+\|transposase	transposase	A0A077SK28	Escherichia_phage	5.8e-125	99.1
AUP42593.1\|5119_5899_-\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	1.7e-138	99.2
AUP42594.1\|5898_6921_-\|transposase	transposase IS100, transposase	A0A2L1IVA1	Escherichia_phage	1.0e-199	99.1
AUP42595.1\|7045_7324_+\|transposase	transposase	A0A077SK28	Escherichia_phage	1.9e-44	95.7
AUP42596.1\|7362_7488_-	hypothetical protein	NA	NA	NA	NA
AUP42597.1\|7719_7851_-	hypothetical protein	NA	NA	NA	NA
AUP42598.1\|8168_12260_+	autotransporter	Q9LA58	Enterobacterial_phage	2.4e-284	42.6
AUP42599.1\|12423_12552_-	hypothetical protein	A0A0N7BTS3	Escherichia_phage	1.6e-06	96.2
AUP42600.1\|12517_13405_-\|transposase	transposase	A0A0N7C1X7	Escherichia_phage	1.6e-169	100.0
AUP42601.1\|13404_13680_-\|transposase	transposase	A0A0N7BVE9	Escherichia_phage	3.5e-46	100.0
AUP42602.1\|13889_14006_-	hypothetical protein	NA	NA	NA	NA
AUP42603.1\|14036_15473_-	hemolysin D	NA	NA	NA	NA
AUP42604.1\|15491_17615_-	peptidase C39	W8CYL7	Bacillus_phage	1.7e-47	29.9
AUP42605.1\|17686_20761_-	exotoxin paxA	NA	NA	NA	NA
AUP42606.1\|20772_21285_-	hemolysin D	NA	NA	NA	NA
AUP42607.1\|21767_22673_-\|integrase	integrase	Q9ZXG3	Shigella_phage	1.2e-167	94.7
AUP42608.1\|22630_22996_-\|transposase	transposase IS2	Q76S41	Shigella_phage	1.1e-58	99.2
AUP42609.1\|23815_23932_-	hypothetical protein	NA	NA	NA	NA
23930:23989	attL	NA	NA	NA	NA
AUP42610.1\|24117_24438_-\|transposase	transposase	NA	NA	NA	NA
AUP42611.1\|24538_25405_-\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-51	40.6
AUP42612.1\|25612_25744_+	hypothetical protein	NA	NA	NA	NA
AUP42613.1\|25755_26619_-\|transposase	transposase	NA	NA	NA	NA
AUP42614.1\|26573_26939_-\|transposase	transposase	NA	NA	NA	NA
AUP42615.1\|27040_27157_+	hypothetical protein	NA	NA	NA	NA
AUP42616.1\|27361_27490_-	hypothetical protein	NA	NA	NA	NA
AUP42617.1\|27594_27960_+\|transposase	transposase IS2	Q76S41	Shigella_phage	9.6e-60	100.0
AUP42618.1\|27983_28823_+\|integrase	integrase	Q9ZXG3	Shigella_phage	5.1e-165	99.3
AUP42619.1\|29360_29528_+	hypothetical protein	NA	NA	NA	NA
AUP42620.1\|30510_30807_-	hypothetical protein	NA	NA	NA	NA
AUP42621.1\|31104_31248_-	hypothetical protein	NA	NA	NA	NA
AUP42622.1\|31506_31623_-	hypothetical protein	NA	NA	NA	NA
AUP42623.1\|31641_32007_+\|transposase	transposase	NA	NA	NA	NA
AUP42624.1\|31961_33194_+\|transposase	transposase IS1294	NA	NA	NA	NA
AUP42625.1\|33374_35492_-	DNA topoisomerase III	NA	NA	NA	NA
AUP42626.1\|35503_36091_-	hypothetical protein	NA	NA	NA	NA
AUP42627.1\|36092_36266_-	hypothetical protein	NA	NA	NA	NA
AUP42628.1\|36340_36556_-	IncN plasmid KikA protein	NA	NA	NA	NA
AUP42629.1\|36661_38629_-	conjugal transfer protein TraK	NA	NA	NA	NA
AUP42630.1\|38679_39699_-	secretion system protein E	NA	NA	NA	NA
AUP42631.1\|39698_40841_-	conjugal transfer protein TraI	NA	NA	NA	NA
AUP42632.1\|40830_41610_-	conjugal transfer protein TraH	NA	NA	NA	NA
AUP42633.1\|41606_42344_-	conjugal transfer protein TraG	NA	NA	NA	NA
AUP42634.1\|42474_44847_-	conjugal transfer protein	NA	NA	NA	NA
AUP42635.1\|44849_45170_-	hypothetical protein	NA	NA	NA	NA
AUP42636.1\|45227_45521_-	conjugal transfer protein	NA	NA	NA	NA
AUP42637.1\|45513_46098_-	conjugal transfer protein	NA	NA	NA	NA
AUP42638.1\|46087_46273_-	hypothetical protein	NA	NA	NA	NA
AUP42639.1\|46468_47464_+	conjugal transfer protein TraA	NA	NA	NA	NA
AUP42640.1\|47465_48107_+	conjugal transfer protein TrbJ	NA	NA	NA	NA
AUP42641.1\|48119_48353_+	hypothetical protein	NA	NA	NA	NA
AUP42642.1\|48393_48681_-	RNA polymerase subunit sigma-70	NA	NA	NA	NA
AUP42643.1\|48877_49216_+	transcriptional regulator	NA	NA	NA	NA
AUP42644.1\|50394_51198_-	hypothetical protein	NA	NA	NA	NA
AUP42645.1\|51256_51376_+	hypothetical protein	NA	NA	NA	NA
AUP42646.1\|52438_53671_-\|transposase	transposase IS1294	NA	NA	NA	NA
54249:54447	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025753

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP025752

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection