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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025986 Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence 0 crisprs csa3,WYL 0 0 9 0
CP025985 Ralstonia solanacearum strain RSCM chromosome, complete genome 0 crisprs cas3,csa3,DEDDh,DinG,WYL 0 0 23 0

Results visualization

1. CP025986
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 94477 : 161949 47 Ralstonia_phage(28.57%) transposase NA
DBSCAN-SWA_2 324910 : 368539 31 Leptospira_phage(33.33%) transposase NA
DBSCAN-SWA_3 456998 : 509933 50 Ralstonia_phage(20.0%) transposase,protease,coat NA
DBSCAN-SWA_4 780826 : 847095 44 Ralstonia_phage(16.67%) transposase NA
DBSCAN-SWA_5 1264993 : 1385556 86 Hokovirus(12.5%) transposase,integrase,protease attL 1290621:1290638|attR 1381416:1381432
DBSCAN-SWA_6 1527171 : 1562889 32 Burkholderia_phage(25.0%) transposase NA
DBSCAN-SWA_7 1579052 : 1649836 54 Burkholderia_phage(22.22%) transposase,protease NA
DBSCAN-SWA_8 1765305 : 1902476 107 Tupanvirus(17.65%) transposase,integrase attL 1778792:1778851|attR 1846613:1847716
DBSCAN-SWA_9 2087075 : 2144887 49 Burkholderia_virus(16.67%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP025985
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 205655 : 315582 93 Acidithiobacillus_phage(45.83%) integrase,portal,terminase,head,transposase,protease,capsid attL 204170:204185|attR 233430:233445
DBSCAN-SWA_2 328543 : 384994 42 Sinorhizobium_phage(12.5%) transposase,protease NA
DBSCAN-SWA_3 402419 : 442146 53 Ralstonia_virus(53.06%) integrase,portal,tail,terminase,head,plate,transposase,holin,capsid attL 399236:399281|attR 442200:442245
DBSCAN-SWA_4 553339 : 616073 60 uncultured_Mediterranean_phage(20.0%) integrase,transposase,protease attL 608716:608732|attR 623624:623640
DBSCAN-SWA_5 650603 : 662961 11 Burkholderia_phage(50.0%) transposase NA
DBSCAN-SWA_6 875815 : 948479 58 uncultured_Mediterranean_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_7 971449 : 1012215 28 Burkholderia_virus(16.67%) integrase,transposase attL 971450:971509|attR 984542:985702
DBSCAN-SWA_8 1154754 : 1211636 53 Ralstonia_phage(25.0%) transposase,holin,protease,tRNA NA
DBSCAN-SWA_9 1215073 : 1265659 39 Acidithiobacillus_phage(35.0%) portal,terminase,head,transposase,protease,capsid NA
DBSCAN-SWA_10 1275506 : 1284527 9 Ralstonia_phage(50.0%) NA NA
DBSCAN-SWA_11 1304841 : 1369663 42 Leptospira_phage(33.33%) transposase NA
DBSCAN-SWA_12 1443563 : 1514055 58 Ralstonia_phage(18.18%) transposase NA
DBSCAN-SWA_13 1673087 : 1739576 58 Ralstonia_phage(11.11%) integrase,transposase,protease attL 1693844:1693867|attR 1745353:1745376
DBSCAN-SWA_14 1756022 : 1812577 39 Burkholderia_virus(33.33%) transposase NA
DBSCAN-SWA_15 1894326 : 1915079 14 Leptospira_phage(66.67%) transposase NA
DBSCAN-SWA_16 2022123 : 2073396 26 Bacillus_phage(22.22%) integrase,transposase,tRNA attL 2049550:2049565|attR 2080337:2080352
DBSCAN-SWA_17 2191937 : 2270522 82 Burkholderia_phage(21.88%) tRNA,tail,portal,terminase,head,transposase,protease,capsid NA
DBSCAN-SWA_18 2541243 : 2549479 8 Planktothrix_phage(16.67%) NA NA
DBSCAN-SWA_19 2714187 : 2731107 16 Ralstonia_phage(50.0%) transposase NA
DBSCAN-SWA_20 2745115 : 2759480 13 Ralstonia_phage(33.33%) transposase,protease,tRNA NA
DBSCAN-SWA_21 2993013 : 3066392 69 Paramecium_bursaria_Chlorella_virus(14.29%) coat,transposase,protease NA
DBSCAN-SWA_22 3311558 : 3421569 88 Leptospira_phage(14.29%) tail,transposase,tRNA NA
DBSCAN-SWA_23 3600709 : 3662170 53 Tupanvirus(33.33%) transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage