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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025988 Lactobacillus plantarum strain LM1004 chromosome, complete genome 1 crisprs DinG,DEDDh,cas3,csa3,RT,WYL 0 0 7 0

Results visualization

1. CP025988
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025988_1 1537008-1537093 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 884 : 24539 29 Lactobacillus_phage(100.0%) protease NA
DBSCAN-SWA_2 72465 : 81190 8 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_3 626565 : 663363 56 Lactobacillus_phage(90.7%) protease NA
DBSCAN-SWA_4 985003 : 1001948 33 Lactobacillus_phage(73.68%) NA NA
DBSCAN-SWA_5 1202706 : 1211217 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_6 2577683 : 2586307 11 Streptococcus_phage(66.67%) NA NA
DBSCAN-SWA_7 3182843 : 3198538 24 Lactobacillus_phage(85.71%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage