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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP026172 Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-bbef, complete sequence 0 crisprs RT,DinG 0 0 2 0
CP026177 Klebsiella pneumoniae strain KPNIH50 chromosome, complete genome 0 crisprs cas3,RT,csa3,DEDDh,WYL,DinG 0 0 14 0
CP026176 Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-bb08, complete sequence 0 crisprs NA 0 0 0 0
CP026175 Klebsiella pneumoniae strain KPNIH50 plasmid pKPC-0cc9, complete sequence 0 crisprs RT 0 0 2 0
CP026174 Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-0d7f, complete sequence 0 crisprs NA 0 0 1 0
CP026173 Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-c4ac, complete sequence 0 crisprs RT 0 0 2 0

Results visualization

1. CP026172
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 175061 : 184490 14 Burkholderia_phage(25.0%) transposase NA
DBSCAN-SWA_2 204430 : 218115 21 Salmonella_phage(31.25%) tail,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP026177
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 122495 : 133382 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_2 336985 : 435535 104 Klebsiella_phage(58.82%) plate,tail,capsid,protease,portal,transposase,holin,terminase,head,tRNA NA
DBSCAN-SWA_3 468469 : 526199 78 Salmonella_phage(21.31%) tail,holin,terminase,integrase attL 468251:468266|attR 523505:523520
DBSCAN-SWA_4 990577 : 1036932 63 Salmonella_phage(28.0%) tail,holin,terminase NA
DBSCAN-SWA_5 1042078 : 1140831 111 Klebsiella_phage(50.0%) tail,capsid,protease,portal,transposase,holin,terminase,head,tRNA NA
DBSCAN-SWA_6 3690203 : 3748178 77 Enterobacteria_phage(20.0%) protease,transposase,holin,terminase,head,tRNA,integrase attL 3705353:3705399|attR 3754503:3754549
DBSCAN-SWA_7 4154314 : 4162889 9 Cronobacter_phage(33.33%) transposase NA
DBSCAN-SWA_8 4234265 : 4243728 9 Dickeya_phage(16.67%) protease,tRNA NA
DBSCAN-SWA_9 4360748 : 4384567 33 Pectobacterium_phage(45.0%) head,tail,integrase attL 4362674:4362687|attR 4370155:4370168
DBSCAN-SWA_10 4389603 : 4399772 9 Pseudomonas_phage(33.33%) NA NA
DBSCAN-SWA_11 4539263 : 4624794 101 Salmonella_phage(16.13%) tail,capsid,protease,portal,transposase,holin,terminase,head,tRNA,integrase attL 4605502:4605518|attR 4624987:4625003
DBSCAN-SWA_12 4729771 : 4736676 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_13 4778053 : 4786431 7 Enterobacteria_phage(28.57%) NA NA
DBSCAN-SWA_14 4895639 : 4954242 78 Escherichia_phage(20.97%) coat,tail,holin,terminase,head,tRNA,integrase attL 4902035:4902057|attR 4948050:4948072
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP026175
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3592 : 12508 10 Macacine_betaherpesvirus(33.33%) NA NA
DBSCAN-SWA_2 82213 : 156752 81 Salmonella_phage(27.27%) transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. CP026174
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 17714 : 61602 57 Faecalibacterium_phage(11.76%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
5. CP026173
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 17427 : 38860 23 Salmonella_phage(42.86%) protease,transposase NA
DBSCAN-SWA_2 45467 : 56182 11 Enterobacteria_phage(25.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage