CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP026279	Klebsiella oxytoca strain KONIH2 plasmid pKOR-b08d, complete sequence	0 crisprs	NA	0
CP026283	Klebsiella oxytoca strain KONIH2 plasmid pKOR-e6bf, complete sequence	0 crisprs	RT,csa3	1
CP026284	Klebsiella oxytoca strain KONIH2 plasmid pKOR-5873, complete sequence	0 crisprs	NA	1
CP026280	Klebsiella oxytoca strain KONIH2 plasmid pKPC-55bf, complete sequence	0 crisprs	RT	1
CP026285	Klebsiella oxytoca strain KONIH2 chromosome, complete genome	0 crisprs	RT,csa3,DEDDh,DinG,cas3,cas14j,WYL	13
CP026278	Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence	0 crisprs	DEDDh	2
CP026282	Klebsiella oxytoca strain KONIH2 plasmid pKOR-e3cb, complete sequence	0 crisprs	WYL,csa3	8
CP026281	Klebsiella oxytoca strain KONIH2 plasmid pKOR-01e8, complete sequence	0 crisprs	RT,csa3	11

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

15615 : 26013

uncultured_Caudovirales_phage(28.57%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08567.1\|15615_15894_-	XRE family transcriptional regulator	O64356	Escherichia_phage	2.5e-07	39.4
AUW08568.1\|15883_16204_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	6.8e-09	39.5
AUW08569.1\|16284_16509_-	hypothetical protein	NA	NA	NA	NA
AUW08570.1\|16519_16732_-	hypothetical protein	NA	NA	NA	NA
AUW08571.1\|16792_17149_-	hypothetical protein	A0A248SL90	Klebsiella_phage	4.4e-25	58.1
AUW08572.1\|17780_18131_-	hypothetical protein	NA	NA	NA	NA
AUW08573.1\|18127_18400_-	hypothetical protein	NA	NA	NA	NA
AUW08574.1\|18627_21708_-\|transposase	DDE transposase	A0A1B0V7H9	Salmonella_phage	8.2e-51	30.6
AUW08575.1\|21731_22043_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AUW08576.1\|22042_22303_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
AUW08577.1\|22472_23093_+	recombinase family protein	E5FFF9	Burkholderia_phage	1.1e-26	37.1
AUW08578.1\|23210_23543_-	conjugal transfer protein TraR	NA	NA	NA	NA
AUW08579.1\|23633_24488_-	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	1.3e-67	48.6
AUW08580.1\|24522_26013_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	8.6e-224	82.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP026285

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

607 : 44419

Escherichia_phage(23.91%)

head,holin,capsid,terminase,portal,protease,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08834.1\|607_1789_+	DUF4102 domain-containing protein	A0A2R2Z2Y0	Escherichia_phage	4.5e-199	84.5
AUW08835.1\|1877_2693_+	hypothetical protein	NA	NA	NA	NA
AUW08836.1\|2746_2932_-	hypothetical protein	G3CFG7	Escherichia_phage	5.2e-14	59.6
AUW08837.1\|4555_5635_-	DGQHR domain-containing protein	T1SBJ4	Salmonella_phage	9.5e-148	73.0
AUW08838.1\|5631_6420_-	hypothetical protein	A4JX52	Burkholderia_virus	8.4e-61	50.2
AUW08839.1\|6419_6719_-	hypothetical protein	K7PJS4	Enterobacterial_phage	5.5e-13	45.7
AUW08840.1\|7141_8299_-	type I restriction endonuclease subunit R	A0A1S5SAB0	Streptococcus_phage	2.4e-35	28.6
AUW08841.1\|8470_8953_-	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	1.7e-11	41.5
AUW08842.1\|9055_9325_+	Cro/Cl family transcriptional regulator	D0UIL8	Aggregatibacter_phage	2.9e-13	49.3
AUW08843.1\|9353_9584_+	hypothetical protein	NA	NA	NA	NA
AUW08844.1\|9584_10040_+	hypothetical protein	K7PJS5	Enterobacterial_phage	2.3e-66	87.8
AUW08845.1\|10277_10490_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	1.7e-16	72.7
AUW08846.1\|10446_11361_+	transcriptional regulator	H2DE83	Erwinia_phage	3.1e-30	59.6
AUW08847.1\|11357_12167_+	DNA methylase	A0A1C9II58	Salmonella_phage	3.6e-115	71.5
AUW08848.1\|12176_12566_+	RusA family crossover junction endodeoxyribonuclease	A0A192Y8N5	Salmonella_phage	3.6e-49	73.6
AUW08849.1\|12580_13276_+	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	1.6e-76	65.2
AUW08850.1\|13272_14253_+	hypothetical protein	A0A291AWV9	Escherichia_phage	2.2e-135	68.4
AUW08851.1\|14266_14845_+	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	5.8e-51	57.8
AUW08852.1\|14995_15235_+	hypothetical protein	NA	NA	NA	NA
AUW08853.1\|15400_15796_+	hypothetical protein	K7PHB9	Enterobacterial_phage	3.2e-61	93.9
AUW08854.1\|15782_16064_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	2.3e-37	80.6
AUW08855.1\|16063_16693_+	endolysin	G8C7W0	Escherichia_phage	3.4e-105	89.5
AUW08856.1\|16700_16976_+	hypothetical protein	G8C7W1	Escherichia_phage	1.9e-15	51.7
AUW08857.1\|16926_17124_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	1.5e-22	85.2
AUW08858.1\|17194_17683_+	hypothetical protein	NA	NA	NA	NA
AUW08859.1\|17769_18153_+	hypothetical protein	Q6UAR9	Klebsiella_phage	5.2e-64	94.5
AUW08860.1\|18219_18465_+	DUF2560 domain-containing protein	A0A286N2R1	Klebsiella_phage	4.2e-19	61.7
AUW08861.1\|18563_18998_+	hypothetical protein	NA	NA	NA	NA
AUW08862.1\|19120_19471_+	HNH endonuclease	A0A1B5FP94	Escherichia_phage	2.7e-51	80.7
AUW08863.1\|19627_20125_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	2.2e-62	72.7
AUW08864.1\|20124_21882_+\|terminase	terminase large subunit	A0A1B5FP96	Escherichia_phage	0.0e+00	90.4
AUW08865.1\|21892_22078_+	hypothetical protein	Q8HAD5	Salmonella_phage	6.2e-15	61.7
AUW08866.1\|22248_23395_+	DDE domain-containing protein	U5P429	Shigella_phage	3.5e-148	93.3
AUW08867.1\|23358_24540_+\|portal	phage portal protein	Q8HAD4	Salmonella_phage	2.3e-187	82.9
AUW08868.1\|24526_25180_+\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	7.9e-105	86.9
AUW08869.1\|25194_26403_+\|capsid	phage major capsid protein	Q8HAD2	Salmonella_phage	1.1e-187	82.0
AUW08870.1\|26441_26645_+	hypothetical protein	S5FNU1	Shigella_phage	1.4e-07	47.0
AUW08871.1\|26641_26962_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	1.7e-15	39.8
AUW08872.1\|26970_27309_+\|head,tail	head-tail adaptor protein	A0A2H4JHK5	uncultured_Caudovirales_phage	6.4e-42	74.1
AUW08873.1\|27305_27755_+	hypothetical protein	Q9MCS9	Enterobacteria_phage	8.7e-63	81.9
AUW08874.1\|27751_28099_+	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	2.3e-31	60.2
AUW08875.1\|28155_28860_+\|tail	phage tail protein	K7PHL2	Enterobacterial_phage	3.6e-79	67.4
AUW08876.1\|28890_29295_+\|tail	phage tail protein	Q9MCS5	Enterobacteria_phage	7.2e-32	55.7
AUW08877.1\|29297_29603_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	9.5e-29	66.0
AUW08878.1\|29596_29794_-	hypothetical protein	NA	NA	NA	NA
AUW08879.1\|29850_30831_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.3e-185	99.1
AUW08880.1\|33398_33674_-	hypothetical protein	NA	NA	NA	NA
AUW08881.1\|33786_34767_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.3e-185	99.1
AUW08882.1\|36271_36745_+	hypothetical protein	A0A286S298	Klebsiella_phage	2.7e-54	62.5
AUW08883.1\|36731_37217_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	1.8e-53	66.9
AUW08884.1\|37226_37607_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	1.6e-57	80.2
AUW08885.1\|37603_40681_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	67.8
AUW08886.1\|40756_44419_+	hypothetical protein	A0A286S1R8	Klebsiella_phage	0.0e+00	90.4

DBSCAN-SWA_2

138769 : 218073

Enterobacteria_phage(13.95%)

head,holin,capsid,terminase,portal,protease,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08976.1\|138769_139750_+\|transposase	ISNCY family transposase	Q2A0A7	Sodalis_phage	1.8e-73	56.7
AUW08977.1\|139798_141247_-	catalase	A0A2K9L0T1	Tupanvirus	6.9e-101	46.7
AUW08978.1\|141516_142059_+	hypothetical protein	NA	NA	NA	NA
AUW08979.1\|142155_143352_+	competence/damage-inducible protein A	NA	NA	NA	NA
AUW08980.1\|143556_144339_+	IclR family transcriptional regulator	NA	NA	NA	NA
AUW08981.1\|144352_145558_+	L-rhamnonate dehydratase	Q6A202	Oenococcus_phage	1.8e-25	28.3
AUW08982.1\|145610_146900_+	MFS transporter	NA	NA	NA	NA
AUW08983.1\|146914_147718_+	2-keto-3-deoxy-L-rhamnonate aldolase	NA	NA	NA	NA
AUW08984.1\|147740_148919_-	anaerobic glycerol-3-phosphate dehydrogenase subunit C	NA	NA	NA	NA
AUW08985.1\|148915_150175_-	glycerol-3-phosphate dehydrogenase subunit GlpB	NA	NA	NA	NA
AUW08986.1\|150164_151787_-	anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA	NA	NA	NA
AUW08987.1\|153414_154485_+	glycerophosphodiester phosphodiesterase	A0A220BYK6	Staphylococcus_phage	3.9e-08	42.9
AUW08988.1\|154556_154811_-	2Fe-2S ferredoxin	G9IAA2	Pseudomonas_phage	8.2e-26	64.0
AUW08989.1\|154810_155941_-	ribonucleotide-diphosphate reductase subunit beta	G9IAA3	Pseudomonas_phage	7.3e-175	78.9
AUW08990.1\|156044_158330_-	ribonucleoside-diphosphate reductase subunit alpha	I3UMG3	Colwellia_phage	1.3e-284	63.8
AUW08991.1\|158674_159403_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA
AUW08992.1\|159588_162222_+	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	6.2e-92	30.7
AUW08993.1\|162352_165199_+	two-component system sensor histidine kinase RcsC	A0A1V0SGX0	Hokovirus	3.4e-43	26.3
AUW08994.1\|165243_165894_-	transcriptional regulator RcsB	NA	NA	NA	NA
AUW08995.1\|165910_168571_-	phosphotransferase RcsD	NA	NA	NA	NA
AUW08996.1\|169342_170461_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	2.0e-116	58.8
AUW08997.1\|170563_171616_+	FAD:protein FMN transferase ApbE	NA	NA	NA	NA
AUW08998.1\|171688_172753_+	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	L7Y5F8	Megavirus	1.4e-18	47.2
AUW08999.1\|172752_173403_+	DNA oxidative demethylase AlkB	NA	NA	NA	NA
AUW09000.1\|173479_175123_+	multidrug ABC transporter permease/ATP-binding protein	W8CYL7	Bacillus_phage	2.4e-09	22.3
AUW09001.1\|175291_176728_+	magnesium transporter	NA	NA	NA	NA
AUW09002.1\|176690_177938_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	1.2e-66	44.3
AUW09003.1\|178217_179852_+	malate dehydrogenase (quinone)	NA	NA	NA	NA
AUW09004.1\|179896_180388_-	ecotin	NA	NA	NA	NA
AUW09005.1\|180659_181766_-	AI-2E family transporter	NA	NA	NA	NA
AUW09006.1\|182353_183454_+	hsdR	NA	NA	NA	NA
AUW09007.1\|183569_184748_-	recombinase	A0A2H4J1K3	uncultured_Caudovirales_phage	3.6e-31	30.8
AUW09008.1\|184750_184960_-	hypothetical protein	NA	NA	NA	NA
AUW09009.1\|185172_186319_+	DDE domain-containing protein	U5P429	Shigella_phage	3.5e-148	93.3
AUW09010.1\|186558_186750_+	TrmB family transcriptional regulator	Q8SBE3	Shigella_phage	1.7e-23	85.7
AUW09011.1\|186899_187949_+	DNA adenine methylase	A5LH81	Enterobacteria_phage	1.5e-169	79.0
AUW09012.1\|188768_190058_+	hypothetical protein	NA	NA	NA	NA
AUW09013.1\|190172_190364_-	hypothetical protein	NA	NA	NA	NA
AUW09014.1\|190281_190707_+	tellurite/colicin resistance protein	Q71TK7	Escherichia_phage	1.1e-59	84.4
AUW09015.1\|191337_191748_-	hypothetical protein	NA	NA	NA	NA
AUW09016.1\|191990_192380_+	hypothetical protein	K7PHB9	Enterobacterial_phage	2.4e-48	80.3
AUW09017.1\|192369_192648_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	4.0e-34	76.1
AUW09018.1\|192647_193277_+	endolysin	F1C591	Cronobacter_phage	3.8e-88	75.8
AUW09019.1\|193279_193555_+	hypothetical protein	G8C7W1	Escherichia_phage	6.6e-21	65.9
AUW09020.1\|193794_194103_+	hypothetical protein	NA	NA	NA	NA
AUW09021.1\|194235_194472_+	hypothetical protein	NA	NA	NA	NA
AUW09022.1\|194481_194823_+	HNH endonuclease	K7P7P4	Enterobacteria_phage	9.3e-49	76.6
AUW09023.1\|195004_195469_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	2.8e-48	62.7
AUW09024.1\|195422_197159_+\|terminase	phage terminase small subunit P27 family	M4QNU0	Tetraselmis_viridis_virus	2.9e-138	44.6
AUW09025.1\|197165_198485_+\|portal	phage portal protein	Q6JIM9	Burkholderia_virus	4.4e-139	59.1
AUW09026.1\|198460_199168_+\|head,protease	HK97 family phage prohead protease	Q6JIM8	Burkholderia_virus	6.4e-68	63.0
AUW09027.1\|199177_200398_+\|capsid	phage major capsid protein	Q6JIM7	Burkholderia_virus	7.5e-141	64.5
AUW09028.1\|200443_200698_+	hypothetical protein	NA	NA	NA	NA
AUW14303.1\|200703_201036_+\|head,tail	phage gp6-like head-tail connector protein	Q6JIM5	Burkholderia_virus	8.8e-12	31.6
AUW09029.1\|201048_201387_+\|head,tail	head-tail adaptor protein	A0A2H4JHK5	uncultured_Caudovirales_phage	2.8e-37	66.1
AUW09030.1\|201383_201833_+	hypothetical protein	Q9MCS9	Enterobacteria_phage	9.7e-62	81.2
AUW09031.1\|201829_202177_+	hypothetical protein	K7PKL6	Enterobacterial_phage	1.8e-31	61.1
AUW09032.1\|202233_202944_+\|tail	phage tail protein	K7PHL2	Enterobacterial_phage	3.7e-84	68.6
AUW09033.1\|202974_203379_+\|tail	phage tail protein	Q9MCS5	Enterobacteria_phage	2.5e-32	56.5
AUW09034.1\|203381_203687_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	6.2e-28	64.0
AUW09035.1\|203878_204394_+	hypothetical protein	A0A1V0E5P7	Salmonella_phage	1.4e-61	70.1
AUW09036.1\|204586_205141_+	hypothetical protein	NA	NA	NA	NA
AUW09037.1\|205198_206392_-\|transposase	IS4/IS5 family transposase	S5FM71	Shigella_phage	1.5e-141	63.7
AUW09038.1\|206515_209908_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	3.8e-283	55.0
AUW09039.1\|209929_210403_+	hypothetical protein	A0A286S298	Klebsiella_phage	1.2e-54	61.4
AUW09040.1\|210389_210866_+	ArsR family transcriptional regulator	A0A286S2B1	Klebsiella_phage	6.7e-53	67.1
AUW09041.1\|210878_211259_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	2.0e-60	82.5
AUW09042.1\|211255_214333_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	61.2
AUW09043.1\|214410_218073_+	hypothetical protein	A0A286S1R8	Klebsiella_phage	0.0e+00	90.0

DBSCAN-SWA_3

224220 : 233198

Pseudomonas_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW09049.1\|224220_225705_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AUW09050.1\|226129_227614_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AUW09051.1\|227787_228039_+	hypothetical protein	NA	NA	NA	NA
AUW09052.1\|228038_229523_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AUW09053.1\|229947_231432_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.1e-29	34.1
AUW14304.1\|231511_231931_+	DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	4.7e-34	55.9
AUW09054.1\|231932_233198_+	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.6e-207	82.9

DBSCAN-SWA_4

378640 : 387034

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW14315.1\|378640_379504_+	peptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-11	29.0
AUW09179.1\|379514_380288_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.8e-27	37.7
AUW09180.1\|380704_381505_+	CadC family transcriptional regulator	NA	NA	NA	NA
AUW09181.1\|381491_381962_+	hypothetical protein	NA	NA	NA	NA
AUW09182.1\|381962_382856_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	2.0e-13	28.4
AUW09183.1\|383100_384462_-	U32 family peptidase	Q6DW11	Phage_TP	1.6e-200	92.0
AUW09184.1\|384779_385502_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	2.4e-30	32.7
AUW09185.1\|385498_387034_-	two-component system sensor histidine kinase BaeA	W8CYF6	Bacillus_phage	2.8e-28	27.6

DBSCAN-SWA_5

447887 : 457524

Enterobacteria_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW09228.1\|447887_449294_+	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	M4QQM4	Ostreococcus_lucimarinus_virus	4.3e-39	28.9
AUW09229.1\|449506_450571_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.2e-104	55.0
AUW09230.1\|450584_451454_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	8.3e-110	67.7
AUW09231.1\|451485_452376_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.4e-27	32.1
AUW09232.1\|452391_452946_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	7.3e-51	56.7
AUW09233.1\|453119_454286_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	7.0e-112	54.0
AUW09234.1\|455187_456156_+\|transposase	IS5-like element IS903 family transposase	A0A1B0VFY5	Salmonella_phage	2.6e-181	97.5
AUW09235.1\|456519_457524_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	3.6e-32	30.1

DBSCAN-SWA_6

598922 : 634476

uncultured_Caudovirales_phage(32.35%)

holin,tail,integrase

attL 590263:590276|attR 600391:600404

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
590263:590276	attL	NA	NA	NA	NA
AUW09363.1\|598922_599939_-\|integrase	integrase	H9C152	Pectobacterium_phage	2.5e-126	64.8
AUW09364.1\|599922_600168_-	hypothetical protein	H9C153	Pectobacterium_phage	1.2e-05	35.2
AUW09365.1\|600124_600328_-	hypothetical protein	H9C154	Pectobacterium_phage	3.9e-10	61.1
AUW09366.1\|600377_600563_-	hypothetical protein	NA	NA	NA	NA
600391:600404	attR	NA	NA	NA	NA
AUW09367.1\|600564_601125_-	hypothetical protein	H9C156	Pectobacterium_phage	2.6e-48	58.4
AUW09368.1\|601124_603335_-	hypothetical protein	H9C157	Pectobacterium_phage	4.1e-97	34.1
AUW09369.1\|603367_603652_-	hypothetical protein	NA	NA	NA	NA
AUW09370.1\|603680_603926_-	hypothetical protein	A0A1B1W282	Salmonella_phage	2.8e-15	55.0
AUW09371.1\|603933_604257_-	hypothetical protein	NA	NA	NA	NA
AUW09372.1\|604890_605346_-	helix-turn-helix domain-containing protein	A0A0U2QW76	Escherichia_phage	1.2e-35	54.3
AUW09373.1\|605454_605688_+	XRE family transcriptional regulator	A0A0U2S629	Escherichia_phage	2.9e-09	44.4
AUW09374.1\|605750_606197_+	hypothetical protein	H9C162	Pectobacterium_phage	1.0e-26	51.4
AUW09375.1\|606280_606439_+	adenylate cyclase	NA	NA	NA	NA
AUW14327.1\|606456_607425_+	helix-turn-helix domain-containing protein	H9C164	Pectobacterium_phage	1.6e-37	73.3
AUW14328.1\|607433_608828_+	replicative DNA helicase	Q76H51	Enterobacteria_phage	1.4e-103	46.9
AUW09376.1\|608866_609535_+	hypothetical protein	NA	NA	NA	NA
AUW09377.1\|609538_609772_+	hypothetical protein	NA	NA	NA	NA
AUW09378.1\|609935_610526_+	adenine methylase	A0A2R9YJG0	Escherichia_phage	5.7e-94	84.7
AUW09379.1\|610528_610759_+	hypothetical protein	A0A2H4JCC5	uncultured_Caudovirales_phage	2.9e-06	38.7
AUW09380.1\|610755_611373_+	hypothetical protein	A0A2H4JEM6	uncultured_Caudovirales_phage	2.3e-05	24.9
AUW09381.1\|611385_611724_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.7e-47	82.0
AUW09382.1\|611906_612098_+	hypothetical protein	NA	NA	NA	NA
AUW09383.1\|612166_612763_+	DUF1367 domain-containing protein	H9C173	Pectobacterium_phage	1.4e-79	70.7
AUW09384.1\|612774_613077_+	hypothetical protein	A0A2H4FS95	Methylophilaceae_phage	1.2e-23	51.7
AUW09385.1\|613232_613529_+	hypothetical protein	NA	NA	NA	NA
AUW09386.1\|613556_613997_+	hypothetical protein	NA	NA	NA	NA
AUW09387.1\|614007_614229_+	hypothetical protein	NA	NA	NA	NA
AUW09388.1\|614232_615858_+\|tail	phage tail protein	A0A2H4J3N6	uncultured_Caudovirales_phage	3.4e-173	59.3
AUW09389.1\|615854_616088_+	hypothetical protein	NA	NA	NA	NA
AUW09390.1\|616074_616923_+	hypothetical protein	A0A2H4JEQ5	uncultured_Caudovirales_phage	1.2e-44	42.5
AUW09391.1\|616956_617421_+	DUF2829 domain-containing protein	A0A1B0VMG3	Pseudomonas_phage	2.5e-60	70.0
AUW09392.1\|617456_617864_+	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	5.5e-40	68.3
AUW09393.1\|618081_618987_+	hypothetical protein	A0A2H4JC66	uncultured_Caudovirales_phage	1.3e-44	39.6
AUW09394.1\|619046_619610_+	hypothetical protein	A0A2H4JID6	uncultured_Caudovirales_phage	3.4e-48	49.7
AUW09395.1\|619609_621601_+	hypothetical protein	A0A2H4J6H2	uncultured_Caudovirales_phage	9.5e-186	48.3
AUW09396.1\|621600_622053_+	N-acetyltransferase	A0A2H4J9Z5	uncultured_Caudovirales_phage	1.2e-22	44.3
AUW09397.1\|622055_622544_+	hypothetical protein	A0A2H4J679	uncultured_Caudovirales_phage	3.5e-09	49.0
AUW09398.1\|622549_625264_+	lytic transglycosylase	G9L6D3	Escherichia_phage	2.0e-287	58.6
AUW09399.1\|625263_628143_+	hypothetical protein	G9L6D4	Escherichia_phage	0.0e+00	68.0
AUW09400.1\|628185_628512_+	hypothetical protein	NA	NA	NA	NA
AUW09401.1\|628584_628926_+	hypothetical protein	A0A2H4J7H0	uncultured_Caudovirales_phage	1.5e-19	48.2
AUW09402.1\|628922_630533_+	transcriptional regulator	A0A2H4JCA3	uncultured_Caudovirales_phage	4.0e-227	71.0
AUW09403.1\|630549_633030_+	hypothetical protein	A0A0A8JA02	Klebsiella_phage	4.6e-97	35.3
AUW09404.1\|633375_633600_+\|holin	holin	A0A0P0ZFW5	Escherichia_phage	2.0e-20	70.1
AUW09405.1\|633583_634120_+	lysozyme	K7PM52	Enterobacteria_phage	6.1e-71	68.8
AUW09406.1\|634116_634476_+	hypothetical protein	R9TPM9	Aeromonas_phage	1.3e-16	43.1

DBSCAN-SWA_7

955887 : 1018764

Thermus_phage(20.0%)

plate,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW09685.1\|955887_956868_+\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	2.1e-24	29.9
AUW09686.1\|957265_958846_-	sulfurtransferase	NA	NA	NA	NA
AUW09687.1\|958847_959444_-	cysteine dioxygenase	NA	NA	NA	NA
AUW09688.1\|959548_959674_-	DNA metabolism protein	NA	NA	NA	NA
AUW09689.1\|959757_960651_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUW09690.1\|960796_961882_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
AUW14341.1\|961935_963024_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUW09691.1\|963035_964010_+	aliphatic sulfonates ABC transporter substrate-binding protein	NA	NA	NA	NA
AUW09692.1\|964006_965035_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUW09693.1\|965015_966011_+	sulfonate ABC transporter permease	NA	NA	NA	NA
AUW09694.1\|966004_966793_+	ABC transporter	G3M9Y6	Bacillus_virus	1.1e-28	33.8
AUW14342.1\|966938_969011_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
AUW09695.1\|969517_970339_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-15	30.5
AUW09696.1\|970335_971361_+	heme ABC transporter	NA	NA	NA	NA
AUW09697.1\|971357_972410_+	iron ABC transporter permease	NA	NA	NA	NA
AUW09698.1\|972426_973374_+	preprotein translocase YidC	NA	NA	NA	NA
AUW09699.1\|973370_974270_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AUW09700.1\|974365_975133_+	basic amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AUW09701.1\|975198_975966_+	amino acid ABC transporter permease	NA	NA	NA	NA
AUW14343.1\|975949_976672_+	polar amino acid ABC transporter ATP-binding protein	NA	NA	NA	NA
AUW09702.1\|976772_977978_-	MFS transporter	NA	NA	NA	NA
AUW09703.1\|978260_979412_+	amidohydrolase	NA	NA	NA	NA
AUW09704.1\|979702_981853_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA
AUW09705.1\|982088_983171_-	malate/lactate/ureidoglycolate dehydrogenase	NA	NA	NA	NA
AUW09706.1\|984031_984523_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AUW14344.1\|984563_986096_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AUW09707.1\|986116_987457_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AUW09708.1\|987453_988143_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AUW09709.1\|988139_989852_+	hypothetical protein	NA	NA	NA	NA
AUW09710.1\|989856_990348_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AUW09711.1\|990636_991002_+\|protease	Clp protease	NA	NA	NA	NA
AUW09712.1\|990998_993524_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	6.1e-20	32.2
AUW09713.1\|993510_994743_+	hypothetical protein	NA	NA	NA	NA
AUW09714.1\|994749_995112_+	hypothetical protein	NA	NA	NA	NA
AUW09715.1\|995559_995790_+	hypothetical protein	NA	NA	NA	NA
AUW09716.1\|998221_1000510_+	hypothetical protein	NA	NA	NA	NA
AUW09717.1\|1000513_1001206_+	hypothetical protein	NA	NA	NA	NA
AUW09718.1\|1001940_1002138_+	hypothetical protein	NA	NA	NA	NA
AUW09719.1\|1002379_1003126_+	hypothetical protein	NA	NA	NA	NA
AUW09720.1\|1003157_1004366_+	hypothetical protein	NA	NA	NA	NA
AUW09721.1\|1004362_1007830_+	type VI secretion protein VasK	NA	NA	NA	NA
AUW09722.1\|1009668_1010649_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.3e-185	99.1
AUW14345.1\|1010686_1010890_-	hypothetical protein	NA	NA	NA	NA
AUW09723.1\|1011064_1011499_+	hypothetical protein	NA	NA	NA	NA
AUW09724.1\|1014175_1014598_+	DUF1240 domain-containing protein	NA	NA	NA	NA
AUW09725.1\|1015960_1017715_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AUW09726.1\|1017678_1018764_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_8

1740729 : 1749153

Cronobacter_phage(28.57%)

holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW10370.1\|1740729_1741344_-\|tail	tail assembly protein	K7PM97	Enterobacterial_phage	1.2e-67	69.6
AUW10371.1\|1741511_1742246_-	peptidase P60	Q6UAW4	Klebsiella_phage	1.6e-125	83.2
AUW10372.1\|1742247_1743000_-\|tail	phage minor tail protein L	K7PKU0	Enterobacteria_phage	5.7e-115	76.3
AUW10373.1\|1742996_1743344_-\|tail	phage tail protein	I6PBN7	Cronobacter_phage	2.4e-36	60.0
AUW10374.1\|1743366_1744476_-\|tail	phage tail tape measure protein	I6PCW3	Cronobacter_phage	5.9e-52	48.5
AUW10375.1\|1744560_1744806_-	hypothetical protein	A0A2H4J4F7	uncultured_Caudovirales_phage	2.3e-09	40.0
AUW10376.1\|1744868_1745180_-	hypothetical protein	I6PDG2	Cronobacter_phage	1.5e-32	62.1
AUW10377.1\|1745252_1745915_-\|tail	phage tail protein	I6PBN6	Cronobacter_phage	7.0e-77	65.0
AUW10378.1\|1746034_1746454_-	hypothetical protein	Q6UAS0	Klebsiella_phage	9.4e-35	51.5
AUW10379.1\|1746509_1747052_-	hypothetical protein	A0A0U2I1S0	Escherichia_phage	5.2e-70	66.7
AUW10380.1\|1747059_1747332_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	2.2e-16	55.4
AUW10381.1\|1747321_1747714_-	hypothetical protein	K7PHB9	Enterobacterial_phage	1.3e-38	66.2
AUW10382.1\|1747790_1748153_-	antitermination protein	C6ZR44	Salmonella_phage	7.1e-31	57.5
AUW14376.1\|1748616_1749153_-	phage repressor protein	K7PKK1	Enterobacteria_phage	5.2e-30	49.7

DBSCAN-SWA_9

1753802 : 1798153

Escherichia_phage(27.27%)

plate,tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW10384.1\|1753802_1754783_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.3e-185	99.1
AUW10385.1\|1754882_1755989_+	porin OmpS2	Q1MVN1	Enterobacteria_phage	4.9e-107	57.4
AUW10386.1\|1756142_1756355_+	KTSC domain-containing protein	NA	NA	NA	NA
AUW10387.1\|1756437_1756872_+	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	7.2e-30	51.4
AUW10388.1\|1757060_1757351_+	lipoprotein bor	C6ZCX3	Enterobacteria_phage	9.7e-31	66.0
AUW14379.1\|1757749_1758688_-\|protease	outer membrane protease PgtE	NA	NA	NA	NA
AUW10389.1\|1759025_1759298_-	hypothetical protein	NA	NA	NA	NA
AUW10390.1\|1759501_1760437_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	5.4e-139	93.4
AUW10391.1\|1760481_1761855_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.8e-50	31.8
AUW10392.1\|1762338_1763322_-	zinc transporter ZntB	NA	NA	NA	NA
AUW10393.1\|1763664_1764285_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AUW10394.1\|1764901_1765645_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	8.6e-15	27.2
AUW14380.1\|1765661_1766729_+	oxidoreductase	NA	NA	NA	NA
AUW10395.1\|1766801_1768067_-	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	3.5e-157	66.4
AUW10396.1\|1768066_1768489_-	translesion error-prone DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	2.6e-32	51.2
AUW10397.1\|1768776_1768971_+	hypothetical protein	NA	NA	NA	NA
AUW10398.1\|1769127_1769319_+	hypothetical protein	NA	NA	NA	NA
AUW10399.1\|1769643_1770612_+\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	1.0e-185	99.1
AUW10400.1\|1770655_1770877_+	PTS cellobiose transporter subunit IIB	NA	NA	NA	NA
AUW10401.1\|1770931_1771495_-	DUF1440 domain-containing protein	NA	NA	NA	NA
AUW10402.1\|1771691_1772273_-	hypothetical protein	NA	NA	NA	NA
AUW10403.1\|1772398_1773028_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
AUW10404.1\|1773389_1773578_-	cold-shock protein	NA	NA	NA	NA
AUW10405.1\|1774293_1775274_-	diguanylate cyclase	NA	NA	NA	NA
AUW10406.1\|1775432_1776317_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUW10407.1\|1776430_1777315_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUW10408.1\|1777486_1778623_+	alpha/beta hydrolase	NA	NA	NA	NA
AUW10409.1\|1778832_1779954_+	MFS transporter	NA	NA	NA	NA
AUW14381.1\|1780051_1780396_+	DUF1294 domain-containing protein	NA	NA	NA	NA
AUW10410.1\|1780497_1781226_+	helix-turn-helix-type transcriptional regulator	Q9EYF2	Enterobacteria_phage	2.1e-45	46.4
AUW10411.1\|1781468_1781903_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
AUW10412.1\|1781899_1782619_+	short-chain dehydrogenase	NA	NA	NA	NA
AUW10413.1\|1782615_1783875_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AUW10414.1\|1783876_1784599_+	DUF1365 domain-containing protein	NA	NA	NA	NA
AUW10415.1\|1784595_1785819_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AUW10416.1\|1785815_1786349_+	DUF3833 domain-containing protein	NA	NA	NA	NA
AUW10417.1\|1786363_1787323_+	DUF1722 domain-containing protein	NA	NA	NA	NA
AUW10418.1\|1787386_1788769_-	carbohydrate porin	NA	NA	NA	NA
AUW10419.1\|1789660_1791115_+	MFS transporter	NA	NA	NA	NA
AUW10420.1\|1791169_1792849_+	glycoside hydrolase family 43 protein	NA	NA	NA	NA
AUW10421.1\|1793011_1794346_-	hypothetical protein	NA	NA	NA	NA
AUW10422.1\|1794369_1794825_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AUW10423.1\|1794826_1795366_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AUW10424.1\|1795343_1796429_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AUW10425.1\|1796392_1798153_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_10

1981079 : 2039272

Enterobacteria_phage(51.43%)

integrase,capsid,plate,terminase,portal,tRNA,tail

attL 1980967:1980984|attR 2018021:2018038

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1980967:1980984	attL	NA	NA	NA	NA
AUW10585.1\|1981079_1981331_-	hypothetical protein	A0A2I8TV89	Erwinia_phage	3.4e-08	49.2
AUW10586.1\|1981374_1982514_-	hypothetical protein	B9A7A9	Serratia_phage	3.0e-144	70.7
AUW10587.1\|1982669_1983842_+\|tail	phage tail protein	A0A0A7NV69	Enterobacteria_phage	3.2e-157	70.2
AUW10588.1\|1983841_1984357_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	5.7e-58	61.8
AUW10589.1\|1984402_1984720_+\|tail	phage tail protein	B9A7B2	Serratia_phage	1.0e-17	54.8
AUW14392.1\|1984719_1984878_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	3.5e-11	63.3
AUW10590.1\|1984864_1987840_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	2.3e-220	46.6
AUW10591.1\|1987855_1988347_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	3.3e-55	62.7
AUW10592.1\|1988560_1990402_-	ribonuclease H	NA	NA	NA	NA
AUW10593.1\|1991113_1992211_-\|tail	phage tail protein	G4KKN6	Yersinia_phage	4.8e-06	45.6
AUW10594.1\|1992195_1992411_-	hypothetical protein	NA	NA	NA	NA
AUW10595.1\|1992407_1995437_-\|tail	phage tail protein I	D5LGZ2	Escherichia_phage	3.7e-24	40.7
AUW10596.1\|1995426_1996350_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	3.4e-53	43.9
AUW10597.1\|1996351_1996702_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	6.0e-27	55.7
AUW10598.1\|1996698_1997286_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.4e-60	61.0
AUW10599.1\|1997282_1997918_-	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	1.1e-55	51.0
AUW10600.1\|1997914_1998382_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	3.1e-47	59.5
AUW14393.1\|1998563_1998893_-	DUF2570 domain-containing protein	NA	NA	NA	NA
AUW10601.1\|1998904_1999450_-	lysozyme	Q1I0Z1	Pasteurella_virus	8.2e-31	42.5
AUW10602.1\|1999446_1999731_-\|tail	phage tail protein	NA	NA	NA	NA
AUW10603.1\|1999721_1999922_-\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	1.6e-16	63.1
AUW10604.1\|1999921_2000437_-\|capsid	capsid assembly protein	A0A0A7NPU2	Enterobacteria_phage	2.2e-41	50.0
AUW10605.1\|2000541_2001408_-\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	7.6e-71	58.1
AUW10606.1\|2001456_2002491_-\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	1.1e-95	49.7
AUW10607.1\|2002500_2003340_-\|capsid	phage capsid protein	A0A0A7NRY7	Enterobacteria_phage	3.0e-96	67.4
AUW10608.1\|2003496_2005224_+	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	3.1e-233	68.3
AUW10609.1\|2005217_2006279_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.3e-141	68.7
AUW10610.1\|2006623_2008495_+	ATP-dependent endonuclease	NA	NA	NA	NA
AUW10611.1\|2008491_2009925_+	hypothetical protein	NA	NA	NA	NA
AUW10612.1\|2012616_2013633_-	hypothetical protein	B7SYG0	Stenotrophomonas_phage	1.5e-65	43.7
AUW14394.1\|2013670_2013898_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	1.9e-05	39.7
AUW10613.1\|2013906_2014473_-	ribonuclease	D4HTX2	Vibrio_phage	2.3e-12	31.0
AUW10614.1\|2014469_2014694_-	hypothetical protein	NA	NA	NA	NA
AUW10615.1\|2014761_2015034_-	hypothetical protein	NA	NA	NA	NA
AUW10616.1\|2015049_2015427_-	hypothetical protein	NA	NA	NA	NA
AUW10617.1\|2015442_2015661_-	DUF4761 domain-containing protein	A0A0M5M1I3	Salmonella_phage	1.6e-06	47.3
AUW10618.1\|2015791_2016118_-	hypothetical protein	NA	NA	NA	NA
AUW10619.1\|2016114_2016384_-	hypothetical protein	Q1JS60	Enterobacteria_phage	3.9e-42	88.8
AUW10620.1\|2016506_2016806_+	XRE family transcriptional regulator	Q1JS61	Enterobacteria_phage	3.5e-36	71.7
AUW10621.1\|2016921_2017935_+\|integrase	integrase	Q83VS6	Escherichia_phage	7.6e-155	79.5
AUW10622.1\|2018167_2019181_+	diguanylate cyclase	NA	NA	NA	NA
2018021:2018038	attR	NA	NA	NA	NA
AUW10623.1\|2019238_2019340_+	hypothetical protein	NA	NA	NA	NA
AUW14395.1\|2019339_2019414_+	hypothetical protein	NA	NA	NA	NA
AUW10624.1\|2019554_2019680_+	hypothetical protein	NA	NA	NA	NA
AUW10625.1\|2019728_2019992_-	DUF2534 domain-containing protein	NA	NA	NA	NA
AUW10626.1\|2020121_2020760_-	leucine efflux protein LeuE	NA	NA	NA	NA
AUW10627.1\|2020850_2021765_-	lipid A biosynthesis palmitoleoyl acyltransferase	A0A1W6JP29	Morganella_phage	4.5e-74	51.2
AUW10628.1\|2022308_2023097_-	SAM-dependent methyltransferase	NA	NA	NA	NA
AUW10629.1\|2023356_2023878_+	RNA polymerase subunit sigma	NA	NA	NA	NA
AUW10630.1\|2023867_2024827_+	iron dicitrate transport regulator FecR	NA	NA	NA	NA
AUW10631.1\|2024924_2027261_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
AUW10632.1\|2027319_2028222_+	Fe(3+)-dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
AUW10633.1\|2028218_2029217_+	iron-dicitrate transporter permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	1.2e-11	24.4
AUW10634.1\|2029213_2030167_+	iron-dicitrate transporter subunit FecD	NA	NA	NA	NA
AUW10635.1\|2030167_2030935_+	ferric citrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	6.8e-15	26.7
AUW10636.1\|2030971_2032015_-	type II asparaginase	NA	NA	NA	NA
AUW10637.1\|2032294_2033485_+	HD domain-containing protein	NA	NA	NA	NA
AUW10638.1\|2033562_2035347_+	hypothetical protein	A0A127AWB9	Bacillus_phage	7.3e-20	37.2
AUW10639.1\|2035492_2036743_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	4.4e-19	90.7
AUW10640.1\|2036979_2037630_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
AUW10641.1\|2037650_2038127_+	NUDIX hydrolase	NA	NA	NA	NA
AUW10642.1\|2038120_2039272_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_11

3617249 : 3706908

Enterobacteria_phage(32.5%)

integrase,capsid,terminase,plate,tRNA,portal,protease,transposase,tail

attL 3621032:3621072|attR 3658068:3658108

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW12044.1\|3617249_3618236_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUW12045.1\|3618285_3619659_-	two-component system sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	4.5e-09	23.3
AUW12046.1\|3619655_3620354_-	DNA-binding response regulator	Q6XM27	Feldmannia_irregularis_virus	4.0e-06	30.3
AUW12047.1\|3620503_3621007_+	stress adaptor protein CpxP	NA	NA	NA	NA
3621032:3621072	attL	NA	NA	NA	NA
AUW12048.1\|3621191_3622172_-\|integrase	integrase	U5N0A8	Enterobacteria_phage	1.4e-153	83.0
AUW12049.1\|3622241_3622535_-	XRE family transcriptional regulator	Q1JS21	Enterobacteria_phage	1.3e-35	74.2
AUW12050.1\|3622688_3622871_+	hypothetical protein	NA	NA	NA	NA
AUW12051.1\|3622858_3623065_-	hypothetical protein	NA	NA	NA	NA
AUW12052.1\|3623186_3623459_+	hypothetical protein	Q1JS20	Enterobacteria_phage	8.2e-40	85.6
AUW12053.1\|3623485_3623704_+	DUF4761 domain-containing protein	A0A0M5M1I3	Salmonella_phage	3.6e-06	48.1
AUW12054.1\|3623719_3623950_+	hypothetical protein	A0A0M4S6M9	Salmonella_phage	1.5e-23	68.6
AUW12055.1\|3623964_3624237_+	hypothetical protein	NA	NA	NA	NA
AUW12056.1\|3624306_3624534_+	hypothetical protein	NA	NA	NA	NA
AUW12057.1\|3624526_3625072_+	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	5.5e-11	26.1
AUW12058.1\|3625080_3625308_+	hypothetical protein	NA	NA	NA	NA
AUW12059.1\|3625304_3625499_+	hypothetical protein	NA	NA	NA	NA
AUW12060.1\|3625491_3626445_+	adenine methylase	A0A0M4QWR0	Salmonella_phage	2.8e-82	54.9
AUW12061.1\|3626444_3626717_+	hypothetical protein	NA	NA	NA	NA
AUW12062.1\|3627028_3628039_+	DNA cytosine methyltransferase	Q6J1P4	Burkholderia_virus	4.1e-100	55.9
AUW14464.1\|3628272_3630519_+	replication endonuclease	F1BUS0	Erwinia_phage	9.6e-134	43.4
AUW12063.1\|3631154_3631847_+	DNA methylase	A0A0M4S5U3	Salmonella_phage	5.3e-91	70.3
AUW12064.1\|3632019_3633168_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
AUW12065.1\|3633157_3633676_+	hypothetical protein	NA	NA	NA	NA
AUW12066.1\|3634099_3635152_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.1e-140	68.4
AUW12067.1\|3635151_3636873_-	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	3.1e-225	66.0
AUW12068.1\|3637030_3637864_+\|capsid	phage capsid protein	B9A7B4	Serratia_phage	9.4e-111	73.3
AUW12069.1\|3637888_3638938_+\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	2.3e-106	54.8
AUW14465.1\|3638985_3639882_+\|terminase	terminase	B9A7B6	Serratia_phage	5.4e-88	75.3
AUW14466.1\|3639984_3640482_+\|capsid	capsid assembly protein	B9A7B7	Serratia_phage	3.8e-59	68.5
AUW12070.1\|3640481_3640682_+\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	5.7e-14	63.1
AUW12071.1\|3640672_3640954_+	hypothetical protein	B9A7B8	Serratia_phage	1.1e-18	55.8
AUW12072.1\|3640950_3641502_+	lysozyme	Q1I0Z1	Pasteurella_virus	1.3e-28	41.3
AUW12073.1\|3641742_3642042_+	peptidase	NA	NA	NA	NA
AUW12074.1\|3642038_3642500_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	2.2e-32	47.1
AUW12075.1\|3642496_3643138_+	phage virion morphogenesis protein	A0A0M4RCU1	Salmonella_phage	9.9e-44	46.8
AUW12076.1\|3643137_3643722_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	2.8e-61	60.6
AUW12077.1\|3643718_3644087_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	1.8e-29	58.3
AUW12078.1\|3644073_3644973_+\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	4.0e-91	61.9
AUW12079.1\|3644965_3645568_+\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	3.0e-42	47.7
AUW12080.1\|3645906_3649227_+	hypothetical protein	A0A286S1R8	Klebsiella_phage	0.0e+00	77.3
AUW12081.1\|3649281_3650310_+\|tail	phage tail protein	Q37842	Escherichia_phage	1.1e-25	45.6
AUW12082.1\|3650408_3650897_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	4.4e-52	60.9
AUW12083.1\|3650911_3653671_-\|tail	phage tail tape measure protein	B9A7B3	Serratia_phage	1.1e-208	70.6
AUW12084.1\|3653660_3653837_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	3.0e-11	71.4
AUW12085.1\|3653833_3654133_-\|tail	phage tail assembly protein	B9A7B2	Serratia_phage	3.4e-31	72.6
AUW12086.1\|3654187_3654703_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.2e-57	64.7
AUW12087.1\|3654702_3655884_-\|tail	phage tail protein	A0A0A7NV69	Enterobacteria_phage	2.7e-156	69.8
AUW12088.1\|3656036_3657191_+	hypothetical protein	B9A7A9	Serratia_phage	2.5e-178	80.7
AUW12089.1\|3657235_3657484_+	hypothetical protein	NA	NA	NA	NA
AUW14467.1\|3657583_3657967_+	hypothetical protein	A0A0M4QWT0	Salmonella_phage	6.8e-40	57.5
AUW12090.1\|3658191_3659088_+	cation-efflux pump FieF	NA	NA	NA	NA
3658068:3658108	attR	NA	NA	NA	NA
AUW12091.1\|3659290_3660253_+	6-phosphofructokinase	NA	NA	NA	NA
AUW12092.1\|3660312_3660798_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA
AUW12093.1\|3660890_3661817_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
AUW12094.1\|3662007_3663342_-	HslU--HslV peptidase ATPase subunit	W6AS21	Erwinia_phage	1.1e-44	30.3
AUW12095.1\|3663351_3663882_-	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA
AUW12096.1\|3663972_3664941_-	cell division protein FtsN	NA	NA	NA	NA
AUW12097.1\|3665032_3666061_-	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA
AUW12098.1\|3666211_3668407_-	primosomal protein N'	NA	NA	NA	NA
AUW12099.1\|3668648_3668864_+	50S ribosomal protein L31	NA	NA	NA	NA
AUW12100.1\|3668961_3669279_-	met repressor	NA	NA	NA	NA
AUW12101.1\|3669545_3670706_+	cystathionine gamma-synthase	NA	NA	NA	NA
AUW12102.1\|3670708_3673141_+	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA
AUW12103.1\|3673180_3673552_-	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
AUW12104.1\|3673642_3674548_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUW12105.1\|3674714_3675602_+	methylenetetrahydrofolate reductase	NA	NA	NA	NA
AUW12106.1\|3675724_3676474_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	6.0e-24	34.1
AUW12107.1\|3676602_3677706_-	glycerol dehydrogenase	NA	NA	NA	NA
AUW12108.1\|3677762_3678425_-	fructose-6-phosphate aldolase	M4SLG0	Cyanophage	3.5e-28	34.0
AUW12109.1\|3678630_3679494_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUW12110.1\|3679645_3680293_+	metal-binding protein ZinT	NA	NA	NA	NA
AUW12111.1\|3680389_3683041_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AUW12112.1\|3683299_3684451_-	acetylornithine deacetylase	NA	NA	NA	NA
AUW12113.1\|3684635_3685640_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
AUW12114.1\|3685646_3686423_+	acetylglutamate kinase	NA	NA	NA	NA
AUW12115.1\|3686500_3687874_+	argininosuccinate lyase	NA	NA	NA	NA
AUW12116.1\|3687938_3688142_+	hypothetical protein	NA	NA	NA	NA
AUW12117.1\|3688141_3689059_+	DNA-binding transcriptional regulator OxyR	NA	NA	NA	NA
AUW12118.1\|3689041_3690442_-	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA
AUW12119.1\|3690638_3691274_+	HTH-type transcriptional repressor FabR	NA	NA	NA	NA
AUW12120.1\|3691289_3691649_+	hypothetical protein	NA	NA	NA	NA
AUW12121.1\|3691695_3692796_-\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	NA	NA	NA	NA
AUW12122.1\|3693326_3694730_+\|transposase	ISNCY family transposase ISKpn21	NA	NA	NA	NA
AUW12123.1\|3694758_3695391_-	hypothetical protein	NA	NA	NA	NA
AUW12124.1\|3697256_3698111_+	glutamate racemase	NA	NA	NA	NA
AUW12125.1\|3704085_3704907_-	HTH-type transcriptional regulator HdfR	NA	NA	NA	NA
AUW12126.1\|3705025_3705364_+	DUF413 domain-containing protein	NA	NA	NA	NA
AUW12127.1\|3705387_3706908_-\|protease	ATP-dependent protease	NA	NA	NA	NA

DBSCAN-SWA_12

4976174 : 5023072

Enterobacteria_phage(23.08%)

coat,head,integrase,lysis,terminase,tRNA,tail

attL 4979308:4979345|attR 5027940:5027977

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW13211.1\|4976174_4977560_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.0e-45	35.1
AUW13212.1\|4977854_4978067_-	ribosome-associated protein	NA	NA	NA	NA
AUW13213.1\|4978068_4978935_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	6.5e-30	34.8
4979308:4979345	attL	NA	NA	NA	NA
AUW13214.1\|4979367_4980531_-\|integrase	integrase	G8C7S0	Escherichia_phage	7.2e-202	86.0
AUW13215.1\|4980407_4980743_-	excisionase	NA	NA	NA	NA
AUW13216.1\|4980744_4980963_-	conjugal transfer protein TraR	NA	NA	NA	NA
AUW13217.1\|4980959_4981169_-	hypothetical protein	NA	NA	NA	NA
AUW13218.1\|4981165_4981822_-	DNA methyltransferase	G8C7S6	Escherichia_phage	3.8e-115	88.9
AUW13219.1\|4981818_4981995_-	DUF1317 domain-containing protein	M1FJ61	Enterobacteria_phage	7.7e-07	50.0
AUW13220.1\|4982006_4982711_-	hypothetical protein	A0A088C400	Shewanella_sp._phage	3.0e-25	39.6
AUW13221.1\|4982722_4983391_-	ATP-binding protein	G9L667	Escherichia_phage	1.1e-48	44.3
AUW13222.1\|4983392_4984052_-	exodeoxyribonuclease X	A0A1W5PTR6	Pseudoalteromonas_phage	6.0e-20	33.3
AUW13223.1\|4984182_4984578_-	hypothetical protein	NA	NA	NA	NA
AUW13224.1\|4984657_4984864_-	cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	5.3e-31	92.6
AUW14529.1\|4985104_4985380_-	hypothetical protein	A0A2D1GLY1	Escherichia_phage	1.2e-27	66.3
AUW13225.1\|4986023_4986683_-	LexA family transcriptional repressor	K7P7K3	Enterobacteria_phage	1.9e-69	61.5
AUW13226.1\|4986791_4987010_+	XRE family transcriptional regulator	A0A1P8DTF8	Proteus_phage	1.4e-13	50.7
AUW13227.1\|4987050_4987272_+	transcriptional regulator	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
AUW13228.1\|4987497_4988397_+	DNA replication protein	F1C5C3	Cronobacter_phage	1.6e-87	54.9
AUW13229.1\|4988386_4989817_+	helicase DnaB	Q9MCT4	Escherichia_phage	3.8e-184	66.9
AUW13230.1\|4989816_4990122_+	hypothetical protein	NA	NA	NA	NA
AUW13231.1\|4990118_4990604_+	hypothetical protein	R9TME7	Aeromonas_phage	1.8e-13	35.3
AUW13232.1\|4990600_4990807_+	hypothetical protein	R9TRD3	Aeromonas_phage	8.1e-32	97.1
AUW13233.1\|4990955_4991288_+	hypothetical protein	NA	NA	NA	NA
AUW13234.1\|4991287_4991500_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	6.2e-11	45.5
AUW13235.1\|4991842_4992172_+	hypothetical protein	R9TQX3	Aeromonas_phage	8.2e-10	88.9
AUW13236.1\|4992302_4992521_+	hypothetical protein	NA	NA	NA	NA
AUW13237.1\|4992548_4992848_+	hypothetical protein	A0A1I9LJU9	Stx_converting_phage	1.2e-15	54.1
AUW13238.1\|4992840_4993071_+	hypothetical protein	G8C7S3	Escherichia_phage	1.7e-09	53.4
AUW13239.1\|4993329_4993779_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	2.2e-37	51.7
AUW13240.1\|4994567_4994798_+	hypothetical protein	NA	NA	NA	NA
AUW13241.1\|4994931_4995741_+	antitermination protein	M9NZB0	Enterobacteria_phage	5.3e-119	75.8
AUW14530.1\|4996729_4997587_+	site-specific DNA-methyltransferase	H2EQJ0	Salmonella_phage	3.3e-50	69.5
AUW13242.1\|4997639_4997921_+	hypothetical protein	NA	NA	NA	NA
AUW13243.1\|4998078_4998303_+\|lysis	lysis protein	M9NZI9	Enterobacteria_phage	6.3e-30	87.8
AUW13244.1\|4998280_4998775_+	lysozyme	M9P0E5	Enterobacteria_phage	2.4e-82	89.0
AUW13245.1\|4998863_4999331_+\|lysis	lysis protein	Q76H63	Enterobacteria_phage	7.5e-57	74.2
AUW13246.1\|4999366_4999642_+	hypothetical protein	K7P6G5	Enterobacteria_phage	5.4e-23	61.5
AUW13247.1\|4999963_5000611_+	hypothetical protein	I6S676	Salmonella_phage	1.5e-100	79.6
AUW13248.1\|5000641_5001130_+	hypothetical protein	I6S1P9	Salmonella_phage	9.2e-50	75.2
AUW13249.1\|5001126_5002686_+\|terminase	terminase	G8C7P3	Escherichia_phage	3.8e-291	88.0
AUW13250.1\|5002698_5004168_+	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	4.5e-148	56.9
AUW13251.1\|5004094_5005102_+\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	4.9e-114	68.1
AUW13252.1\|5005223_5006585_+	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	3.1e-127	52.2
AUW13253.1\|5006584_5007046_+	hypothetical protein	B1GS72	Salmonella_phage	5.0e-29	50.3
AUW13254.1\|5007042_5008098_+\|coat	phage coat protein	B1GS73	Salmonella_phage	3.8e-101	53.1
AUW13255.1\|5008130_5008394_+	hypothetical protein	NA	NA	NA	NA
AUW13256.1\|5008396_5008777_+	hypothetical protein	F1C5E2	Cronobacter_phage	9.1e-29	54.5
AUW13257.1\|5008776_5008950_+	50S ribosomal protein L13	Q5G8X7	Enterobacteria_phage	5.4e-13	53.6
AUW13258.1\|5008949_5009312_+	hypothetical protein	A0A0M3LSC9	Mannheimia_phage	1.9e-20	50.0
AUW13259.1\|5009314_5009740_+	hypothetical protein	R9TPP7	Aeromonas_phage	5.1e-28	47.9
AUW13260.1\|5009736_5010129_+	hypothetical protein	G0ZNE4	Cronobacter_phage	3.3e-34	51.9
AUW13261.1\|5010197_5010950_+	DNA breaking-rejoining protein	G0ZNE6	Cronobacter_phage	5.8e-43	42.1
AUW13262.1\|5011002_5011680_+	hypothetical protein	F1C5E8	Cronobacter_phage	9.7e-74	58.4
AUW13263.1\|5011855_5012611_+	DNA-binding protein	K7PGT4	Enterobacteria_phage	2.4e-60	51.0
AUW13264.1\|5012613_5012868_+	hypothetical protein	K7PM89	Enterobacteria_phage	6.7e-20	73.0
AUW14531.1\|5012942_5013281_+	hypothetical protein	NA	NA	NA	NA
AUW14532.1\|5013288_5013609_+	hypothetical protein	NA	NA	NA	NA
AUW13265.1\|5013660_5014095_-	hypothetical protein	NA	NA	NA	NA
AUW13266.1\|5014099_5014348_-	Arc family DNA-binding protein	E7C9U8	Salmonella_phage	8.0e-26	72.8
AUW13267.1\|5014435_5014597_+	Arc family DNA-binding protein	I6S1K8	Salmonella_phage	1.6e-11	63.3
AUW13268.1\|5015705_5019230_+	hypothetical protein	R9TMK1	Aeromonas_phage	2.8e-297	67.1
AUW14533.1\|5019329_5019749_+	hypothetical protein	A0A2P1MXB5	Escherichia_phage	4.1e-30	47.1
AUW13269.1\|5019748_5020219_+	hypothetical protein	R9TPR6	Aeromonas_phage	2.4e-26	39.7
AUW13270.1\|5020215_5020611_+	hypothetical protein	F1C5F2	Cronobacter_phage	6.1e-36	54.8
AUW13271.1\|5020597_5023072_+\|tail	phage tail protein	F1C5A7	Cronobacter_phage	3.8e-200	45.6
5027940:5027977	attR	NA	NA	NA	NA

DBSCAN-SWA_13

6057396 : 6069938

Escherichia_coli_O157_typing_phage(37.5%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW14187.1\|6057396_6059874_-	hypothetical protein	A0A0F6TK45	Escherichia_coli_O157_typing_phage	0.0e+00	84.2
AUW14188.1\|6059877_6061686_-	hypothetical protein	A0A0F6TJQ3	Escherichia_coli_O157_typing_phage	6.8e-239	71.1
AUW14583.1\|6061682_6063998_-	lytic transglycosylase domain-containing protein	A0A0F6R8M6	Escherichia_coli_O157_typing_phage	1.6e-107	35.7
AUW14189.1\|6064231_6064729_-	hypothetical protein	A0A2H4J679	uncultured_Caudovirales_phage	3.4e-07	42.9
AUW14190.1\|6064820_6065120_+	hypothetical protein	A0A2H4JEE3	uncultured_Caudovirales_phage	7.4e-10	40.3
AUW14191.1\|6065187_6065697_-\|tRNA	tRNA-(guanine-N1)-methyltransferase	H9C162	Pectobacterium_phage	6.1e-20	41.8
AUW14584.1\|6065836_6066091_+	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	2.4e-09	46.5
AUW14192.1\|6066400_6067663_-	O-antigen ligase domain-containing protein	NA	NA	NA	NA
AUW14193.1\|6067669_6068701_-	capsular biosynthesis protein	NA	NA	NA	NA
AUW14194.1\|6068921_6069938_-\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	9.8e-187	99.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP026280

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3547 : 47152

Escherichia_phage(41.67%)

transposase,integrase

attL 9544:9559|attR 50398:50413

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW07883.1\|3547_4552_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AUW07884.1\|5670_5886_+	hypothetical protein	NA	NA	NA	NA
AUW07885.1\|6000_6705_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUW07886.1\|7273_7855_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AUW07887.1\|7859_8198_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
AUW07888.1\|8227_8557_-	thioredoxin	V9SJ74	Achromobacter_phage	1.3e-10	34.7
AUW07889.1\|8770_9877_+	alkene reductase	NA	NA	NA	NA
9544:9559	attL	NA	NA	NA	NA
AUW07890.1\|9942_10644_+	DsbA family oxidoreductase	NA	NA	NA	NA
AUW07891.1\|10709_11483_+	SDR family oxidoreductase	NA	NA	NA	NA
AUW07892.1\|12944_13913_-	AAA family ATPase	NA	NA	NA	NA
AUW07893.1\|13902_15564_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUW07894.1\|15547_16108_-	recombinase family protein	A0A1W5LU24	Ralstonia_phage	1.9e-30	41.8
AUW07895.1\|16446_16923_-	hypothetical protein	NA	NA	NA	NA
AUW07896.1\|17015_17282_-	hypothetical protein	NA	NA	NA	NA
AUW08041.1\|17422_18043_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AUW07897.1\|18503_19373_-	EamA family transporter	NA	NA	NA	NA
AUW07898.1\|19613_20366_+	alpha/beta hydrolase	NA	NA	NA	NA
AUW07899.1\|20805_21810_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUW07900.1\|23936_24941_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AUW07901.1\|25661_26156_-	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA
AUW07902.1\|26145_26607_-	peptide-methionine (R)-S-oxide reductase	NA	NA	NA	NA
AUW07903.1\|26841_27348_-	DUF417 domain-containing protein	NA	NA	NA	NA
AUW07904.1\|27378_27639_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AUW07905.1\|27851_28409_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AUW07906.1\|28505_28772_-	hypothetical protein	NA	NA	NA	NA
AUW07907.1\|29145_30150_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
AUW07908.1\|31203_31908_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUW07909.1\|31954_32191_-	hypothetical protein	NA	NA	NA	NA
AUW07910.1\|32264_32681_-	PIN domain nuclease	NA	NA	NA	NA
AUW07911.1\|32677_32908_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
AUW07912.1\|32891_33326_+	hypothetical protein	NA	NA	NA	NA
AUW07913.1\|33249_33444_-	hypothetical protein	NA	NA	NA	NA
AUW07914.1\|33495_33714_+	plasmid maintenance protein CcdA	NA	NA	NA	NA
AUW07915.1\|33715_34021_+	plasmid maintenance protein CcdB	NA	NA	NA	NA
AUW08042.1\|34225_34585_+	hypothetical protein	NA	NA	NA	NA
AUW07916.1\|34611_34926_+	hypothetical protein	NA	NA	NA	NA
AUW07917.1\|34936_35953_+	hypothetical protein	NA	NA	NA	NA
AUW07918.1\|36150_36945_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.5e-52	88.7
AUW08043.1\|37384_37564_-	Par-like protein	NA	NA	NA	NA
AUW07919.1\|37683_38310_-	cobyrinic acid ac-diamide synthase	A0A222YXS3	Escherichia_phage	2.9e-40	43.6
AUW07920.1\|38942_39818_-	replication initiation protein	Q71TL8	Escherichia_phage	5.6e-82	56.4
AUW07921.1\|40229_41501_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	5.2e-153	64.0
AUW07922.1\|41500_41932_-	peptidase	A0A1W6JNS2	Morganella_phage	2.1e-29	53.3
AUW07923.1\|42090_42342_+	hypothetical protein	NA	NA	NA	NA
AUW07924.1\|42341_43826_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AUW07925.1\|44074_45046_+	StbA family protein	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
AUW07926.1\|45048_45720_+	Mediator of plasmid stability	NA	NA	NA	NA
AUW07927.1\|45783_46014_+	hypothetical protein	NA	NA	NA	NA
AUW07928.1\|46450_47152_+	DNA methylase	A0A2I7RE86	Vibrio_phage	3.2e-27	36.7
50398:50413	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP026284

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

15328 : 43508

Escherichia_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08703.1\|15328_16033_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUW08704.1\|16009_16291_+	hypothetical protein	NA	NA	NA	NA
AUW08705.1\|16906_17242_-\|transposase	transposase	G8DH70	Emiliania_huxleyi_virus	2.8e-05	35.7
AUW08706.1\|17133_17361_-	protein SamB	NA	NA	NA	NA
AUW08707.1\|17400_18048_+	hypothetical protein	NA	NA	NA	NA
AUW08708.1\|18112_18487_+	cupin domain-containing protein	NA	NA	NA	NA
AUW08709.1\|18510_19074_+	chlorite dismutase	NA	NA	NA	NA
AUW08710.1\|20455_21160_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUW08711.1\|21421_23083_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AUW08712.1\|23402_24107_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUW08713.1\|24319_27304_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	2.8e-306	54.3
AUW08714.1\|27382_28387_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AUW08715.1\|28761_29028_+	hypothetical protein	NA	NA	NA	NA
AUW08716.1\|29124_29682_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AUW08717.1\|29894_30155_+	DUF1471 domain-containing protein	NA	NA	NA	NA
AUW08718.1\|30185_30692_+	DUF417 domain-containing protein	NA	NA	NA	NA
AUW08719.1\|30926_31388_+	peptide-methionine (R)-S-oxide reductase	NA	NA	NA	NA
AUW08720.1\|31377_31872_+	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA
AUW08721.1\|32412_33816_+\|transposase	ISNCY family transposase ISKpn21	NA	NA	NA	NA
AUW08722.1\|33844_34477_-	hypothetical protein	NA	NA	NA	NA
AUW08723.1\|34829_35108_+	CopG family transcriptional regulator	NA	NA	NA	NA
AUW08724.1\|35095_35407_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AUW08725.1\|35777_36209_+	hypothetical protein	NA	NA	NA	NA
AUW08726.1\|36315_36531_-	mobilization protein	NA	NA	NA	NA
AUW08727.1\|36537_37029_-	mobilization protein	NA	NA	NA	NA
AUW08728.1\|37076_37298_+	hypothetical protein	NA	NA	NA	NA
AUW08729.1\|37313_37919_-	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
AUW08730.1\|38013_40911_+\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	7.9e-181	37.7
AUW08731.1\|41550_41922_+	hypothetical protein	NA	NA	NA	NA
AUW08732.1\|42239_43508_+\|transposase	IS4 family transposase ISApu1	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. CP026278

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1424 : 20015

Escherichia_phage(30.77%)

lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW07751.1\|1424_1643_-	conjugal transfer protein TraR	A0A0N7C211	Escherichia_phage	7.1e-10	49.3
AUW07752.1\|1639_1849_-	hypothetical protein	NA	NA	NA	NA
AUW07753.1\|1845_2502_-	DNA methyltransferase	G8C7S6	Escherichia_phage	3.8e-115	88.9
AUW07754.1\|2498_2675_-	DUF1317 domain-containing protein	M1FJ61	Enterobacteria_phage	7.7e-07	50.0
AUW07755.1\|2686_3391_-	hypothetical protein	A0A088C400	Shewanella_sp._phage	3.0e-25	39.6
AUW07756.1\|3402_4071_-	ATP-binding protein	G9L667	Escherichia_phage	1.1e-48	44.3
AUW07757.1\|4072_4732_-	exodeoxyribonuclease X	A0A1W5PTR6	Pseudoalteromonas_phage	6.0e-20	33.3
AUW07758.1\|4862_5258_-	hypothetical protein	NA	NA	NA	NA
AUW07759.1\|5337_5544_-	cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	5.3e-31	92.6
AUW07804.1\|5784_6060_-	hypothetical protein	A0A2D1GLY1	Escherichia_phage	1.2e-27	66.3
AUW07760.1\|6703_7363_-	LexA family transcriptional repressor	K7P7K3	Enterobacteria_phage	1.9e-69	61.5
AUW07761.1\|7471_7690_+	XRE family transcriptional regulator	A0A1P8DTF8	Proteus_phage	1.4e-13	50.7
AUW07762.1\|7730_7952_+	transcriptional regulator	A2SY75	Escherichia_phage	1.4e-05	52.0
AUW07763.1\|8177_9077_+	DNA replication protein	F1C5C3	Cronobacter_phage	1.6e-87	54.9
AUW07764.1\|9066_10497_+	helicase DnaB	Q9MCT4	Escherichia_phage	3.8e-184	66.9
AUW07765.1\|10496_10802_+	hypothetical protein	NA	NA	NA	NA
AUW07766.1\|10798_11284_+	hypothetical protein	R9TME7	Aeromonas_phage	1.8e-13	35.3
AUW07767.1\|11280_11487_+	hypothetical protein	R9TRD3	Aeromonas_phage	8.1e-32	97.1
AUW07768.1\|11483_11969_+	hypothetical protein	NA	NA	NA	NA
AUW07769.1\|11968_12181_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	6.2e-11	45.5
AUW07805.1\|13032_13530_+	hypothetical protein	A0A1I9LJU9	Stx_converting_phage	2.0e-15	54.1
AUW07770.1\|13522_13753_+	hypothetical protein	G8C7S3	Escherichia_phage	1.7e-09	53.4
AUW07771.1\|14011_14461_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	2.2e-37	51.7
AUW07772.1\|14453_14624_+	hypothetical protein	G8C7V4	Escherichia_phage	5.7e-15	71.4
AUW07773.1\|14616_15255_+	hypothetical protein	H6WRY9	Salmonella_phage	7.0e-74	68.9
AUW07774.1\|15251_15482_+	hypothetical protein	NA	NA	NA	NA
AUW07775.1\|15615_16425_+	antitermination protein	M9NZB0	Enterobacteria_phage	5.3e-119	75.8
AUW07806.1\|17413_18271_+	site-specific DNA-methyltransferase	H2EQJ0	Salmonella_phage	3.3e-50	69.5
AUW07776.1\|18323_18605_+	hypothetical protein	NA	NA	NA	NA
AUW07777.1\|18762_18987_+\|lysis	lysis protein	M9NZI9	Enterobacteria_phage	6.3e-30	87.8
AUW07778.1\|18964_19459_+	lysozyme	M9P0E5	Enterobacteria_phage	2.4e-82	89.0
AUW07779.1\|19547_20015_+\|lysis	lysis protein	Q76H63	Enterobacteria_phage	7.5e-57	74.2

DBSCAN-SWA_2

23380 : 43755

Cronobacter_phage(45.45%)

tail,head,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW07780.1\|23380_24850_+	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	4.5e-148	56.9
AUW07781.1\|24776_25784_+\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	4.9e-114	68.1
AUW07782.1\|25905_27267_+	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	3.1e-127	52.2
AUW07783.1\|27266_27728_+	hypothetical protein	B1GS72	Salmonella_phage	5.0e-29	50.3
AUW07784.1\|27724_28780_+\|coat	phage coat protein	B1GS73	Salmonella_phage	3.8e-101	53.1
AUW07785.1\|28812_29076_+	hypothetical protein	NA	NA	NA	NA
AUW07786.1\|29078_29459_+	hypothetical protein	F1C5E2	Cronobacter_phage	9.1e-29	54.5
AUW07787.1\|29458_29632_+	50S ribosomal protein L13	Q5G8X7	Enterobacteria_phage	5.4e-13	53.6
AUW07788.1\|29631_29994_+	hypothetical protein	G0ZNE2	Cronobacter_phage	4.3e-28	52.5
AUW07789.1\|29996_30422_+	hypothetical protein	R9TPP7	Aeromonas_phage	5.1e-28	47.9
AUW07790.1\|30418_30811_+	hypothetical protein	G0ZNE4	Cronobacter_phage	3.3e-34	51.9
AUW07791.1\|30879_31632_+	DNA breaking-rejoining protein	F1C5E5	Cronobacter_phage	3.2e-33	44.9
AUW07792.1\|31684_32362_+	hypothetical protein	F1C5E8	Cronobacter_phage	9.7e-74	58.4
AUW07793.1\|32537_33293_+	DNA-binding protein	K7PGT4	Enterobacteria_phage	2.4e-60	51.0
AUW07794.1\|33295_33550_+	hypothetical protein	K7PM89	Enterobacteria_phage	6.7e-20	73.0
AUW07807.1\|33624_33963_+	hypothetical protein	NA	NA	NA	NA
AUW07808.1\|33970_34291_+	hypothetical protein	NA	NA	NA	NA
AUW07795.1\|34342_34777_-	hypothetical protein	NA	NA	NA	NA
AUW07796.1\|34781_35030_-	Arc family DNA-binding protein	E7C9U8	Salmonella_phage	8.0e-26	72.8
AUW07797.1\|35117_35279_+	Arc family DNA-binding protein	I6S1K8	Salmonella_phage	1.6e-11	63.3
AUW07798.1\|35347_36289_+	antirepressor protein Ant	I6S627	Salmonella_phage	1.5e-77	68.0
AUW07799.1\|36388_39913_+	hypothetical protein	R9TMK1	Aeromonas_phage	2.8e-297	67.1
AUW07809.1\|40012_40432_+	hypothetical protein	A0A2P1MXB5	Escherichia_phage	4.1e-30	47.1
AUW07800.1\|40431_40902_+	hypothetical protein	R9TPR6	Aeromonas_phage	2.4e-26	39.7
AUW07801.1\|40898_41294_+	hypothetical protein	F1C5F2	Cronobacter_phage	6.1e-36	54.8
AUW07802.1\|41280_43755_+\|tail	phage tail protein	F1C5A7	Cronobacter_phage	3.8e-200	45.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. CP026282

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 55863

Escherichia_phage(43.75%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08285.1\|702_2136_-	glycogen synthase GlgA	NA	NA	NA	NA
AUW08286.1\|2225_3509_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
AUW08287.1\|3638_5831_-	1,4-alpha-glucan branching enzyme	NA	NA	NA	NA
AUW08288.1\|6203_7172_+\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	5.1e-185	98.8
AUW08289.1\|7472_7673_+	glycogen synthesis protein GlgS	NA	NA	NA	NA
AUW08290.1\|8934_9939_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUW08291.1\|12521_13127_+	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
AUW08292.1\|13516_16204_-	carbonate dehydratase	M1I547	Acanthocystis_turfacea_Chlorella_virus	1.2e-71	27.5
AUW08293.1\|16254_16686_-	universal stress protein UspG	A0A1W6JNV4	Morganella_phage	2.0e-24	44.1
AUW08294.1\|17210_18296_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AUW08295.1\|18295_21352_+	MFS transporter	S5VTK5	Leptospira_phage	1.9e-52	22.0
AUW08296.1\|21502_22468_+	acyltransferase	NA	NA	NA	NA
AUW08297.1\|22475_23051_-	phospholipid:lipid A palmitoyltransferase	NA	NA	NA	NA
AUW08298.1\|23099_23555_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
AUW08299.1\|23626_23977_+	mercuric transport protein	NA	NA	NA	NA
AUW08300.1\|23992_24268_+	mercuric transporter periplasmic component	NA	NA	NA	NA
AUW08301.1\|24295_24721_+	mercury transport protein MerC	NA	NA	NA	NA
AUW08302.1\|24759_26445_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
AUW08303.1\|26462_26828_+	transcriptional regulator	NA	NA	NA	NA
AUW08304.1\|26824_27061_+	mercury resistance protein	NA	NA	NA	NA
AUW08541.1\|27044_27164_-	mercury resistance protein	NA	NA	NA	NA
AUW08305.1\|27126_27339_+	DUF3330 domain-containing protein	NA	NA	NA	NA
AUW08306.1\|27468_28026_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	3.4e-48	81.3
AUW08307.1\|28110_28815_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	2.6e-138	99.6
AUW08308.1\|28848_28983_-	ABC transporter	NA	NA	NA	NA
AUW08309.1\|29135_29636_-	ferritin	NA	NA	NA	NA
AUW08310.1\|29962_30667_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	2.6e-138	99.6
AUW08311.1\|30786_31767_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	98.8
AUW08312.1\|32044_32326_-	XRE family transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.3e-08	38.0
AUW08313.1\|32306_32636_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	2.4e-09	44.2
AUW08314.1\|32856_33135_+	hypothetical protein	NA	NA	NA	NA
AUW08315.1\|33682_34705_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUW08542.1\|37667_38372_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUW08316.1\|38614_39741_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.4e-48	40.8
AUW08317.1\|42920_43118_-	hypothetical protein	NA	NA	NA	NA
AUW08318.1\|43322_45980_+	conjugal transfer protein TraN	NA	NA	NA	NA
AUW08319.1\|46024_46795_-	hypothetical protein	NA	NA	NA	NA
AUW08320.1\|46922_47453_-	transcriptional regulator	NA	NA	NA	NA
AUW08321.1\|47455_47986_-	hypothetical protein	NA	NA	NA	NA
AUW08322.1\|47978_48539_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
AUW08323.1\|48568_49099_-	hypothetical protein	NA	NA	NA	NA
AUW08324.1\|49113_50136_-	rod shape-determining protein MreD	NA	NA	NA	NA
AUW08325.1\|51459_52476_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	9.8e-187	99.7
AUW08543.1\|53392_53599_+	hypothetical protein	NA	NA	NA	NA
AUW08326.1\|53737_53977_+	antitoxin	NA	NA	NA	NA
AUW08327.1\|53979_54288_+	cytotoxin	NA	NA	NA	NA
AUW08328.1\|54621_55176_+	hypothetical protein	NA	NA	NA	NA
AUW08329.1\|55245_55863_+	hypothetical protein	A0A076G6Q2	Escherichia_phage	4.1e-63	53.4

DBSCAN-SWA_2

65059 : 65902

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08344.1\|65059_65902_+	HNH endonuclease	G0X580	Salmonella_phage	1.8e-16	39.5

DBSCAN-SWA_3

69782 : 79222

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08347.1\|69782_70787_+	peptide transporter	A0A1B0V750	Salmonella_phage	3.0e-18	27.2
AUW08348.1\|70910_71312_+	hypothetical protein	NA	NA	NA	NA
AUW08349.1\|71283_72984_+	ATPase	A0A172JHZ0	Bacillus_phage	3.5e-96	36.7
AUW08350.1\|73121_73346_+	hypothetical protein	NA	NA	NA	NA
AUW08351.1\|73625_73943_+	hypothetical protein	NA	NA	NA	NA
AUW08352.1\|73944_74694_+	hypothetical protein	NA	NA	NA	NA
AUW08353.1\|74714_75401_+	hypothetical protein	NA	NA	NA	NA
AUW08354.1\|75559_76735_+	hypothetical protein	A0A088FQX6	Escherichia_phage	6.5e-17	31.3
AUW08355.1\|76908_77430_+	hypothetical protein	NA	NA	NA	NA
AUW08356.1\|77426_77795_+	hypothetical protein	NA	NA	NA	NA
AUW08357.1\|77803_79222_+	replicative DNA helicase	O80281	Escherichia_phage	4.3e-188	73.6

DBSCAN-SWA_4

82961 : 126707

Salmonella_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08362.1\|82961_84082_-\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8
AUW08363.1\|84195_84543_+	hypothetical protein	NA	NA	NA	NA
AUW08364.1\|84793_85144_+	hypothetical protein	NA	NA	NA	NA
AUW08365.1\|85176_85476_+	hypothetical protein	NA	NA	NA	NA
AUW08366.1\|86367_87372_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUW08367.1\|87450_90435_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	5.4e-302	54.4
AUW08368.1\|90489_91113_-	serine recombinase	NA	NA	NA	NA
AUW08369.1\|91537_93016_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	3.1e-197	74.0
AUW08370.1\|93033_93861_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	9.8e-52	40.2
AUW08371.1\|95263_96268_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUW08372.1\|99486_99681_+	hypothetical protein	NA	NA	NA	NA
AUW08373.1\|99696_100020_-	hypothetical protein	NA	NA	NA	NA
AUW08374.1\|100111_100303_-	transcriptional regulator	NA	NA	NA	NA
AUW08375.1\|100446_100971_+	hypothetical protein	NA	NA	NA	NA
AUW08376.1\|101042_101588_+	hypothetical protein	NA	NA	NA	NA
AUW08377.1\|101724_102027_+	hypothetical protein	NA	NA	NA	NA
AUW08378.1\|102138_102564_+	hypothetical protein	A0A0K1YBA5	Cronobacter_phage	1.6e-26	42.8
AUW08379.1\|102717_103437_+	HNH endonuclease	G0X580	Salmonella_phage	2.2e-07	39.5
AUW08380.1\|104641_104911_+	hypothetical protein	NA	NA	NA	NA
AUW08547.1\|104965_106048_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	1.1e-79	56.5
AUW08381.1\|107009_107258_+	hypothetical protein	NA	NA	NA	NA
AUW08382.1\|107830_108697_+	repA protein	J9Q7H0	Salmonella_phage	8.4e-46	37.2
AUW08383.1\|109107_109593_+	hypothetical protein	NA	NA	NA	NA
AUW08384.1\|109680_109998_+	hypothetical protein	NA	NA	NA	NA
AUW08385.1\|110019_110418_+	hypothetical protein	NA	NA	NA	NA
AUW08548.1\|110736_110964_+	hypothetical protein	NA	NA	NA	NA
AUW08386.1\|111144_112068_+	hypothetical protein	NA	NA	NA	NA
AUW08387.1\|112103_112427_-	hypothetical protein	NA	NA	NA	NA
AUW08388.1\|112709_112928_+	hypothetical protein	NA	NA	NA	NA
AUW08389.1\|113188_113425_+	hypothetical protein	NA	NA	NA	NA
AUW08390.1\|113985_115599_+	HNH endonuclease	A0A1S6KZY3	Salmonella_phage	2.2e-07	37.0
AUW08391.1\|115714_116014_-	hypothetical protein	NA	NA	NA	NA
AUW08392.1\|116428_116635_+	hypothetical protein	NA	NA	NA	NA
AUW08393.1\|116735_116987_+	hypothetical protein	NA	NA	NA	NA
AUW08394.1\|117023_117521_-	hypothetical protein	NA	NA	NA	NA
AUW08395.1\|118025_120092_-	DUF87 domain-containing protein	NA	NA	NA	NA
AUW08396.1\|120088_121480_-	hypothetical protein	NA	NA	NA	NA
AUW08397.1\|121641_122610_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	1.6e-186	100.0
AUW08398.1\|123636_124341_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUW08399.1\|124399_124651_+	hypothetical protein	NA	NA	NA	NA
AUW08400.1\|124764_125910_+	ABC transporter permease	NA	NA	NA	NA
AUW08549.1\|125906_126707_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.8e-10	27.7

DBSCAN-SWA_5

132624 : 221568

104

Salmonella_phage(18.18%)

transposase,integrase

attL 137163:137222|attR 184716:185936

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08406.1\|132624_132981_+\|transposase	IS3 family transposase	U5P4I9	Shigella_phage	1.7e-32	91.2
AUW08407.1\|132937_134089_+\|transposase	IS30 family transposase IS30	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
AUW08408.1\|135571_136603_+\|transposase	IS630-like element ISEc33 family transposase	NA	NA	NA	NA
AUW08550.1\|136741_137017_-	hypothetical protein	NA	NA	NA	NA
137163:137222	attL	NA	NA	NA	NA
AUW08409.1\|137233_138353_+\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8
AUW08410.1\|138528_138843_-	hypothetical protein	NA	NA	NA	NA
AUW08411.1\|139057_140461_+\|transposase	ISNCY family transposase ISKpn21	NA	NA	NA	NA
AUW08412.1\|140489_141122_-	hypothetical protein	NA	NA	NA	NA
AUW08413.1\|141326_141557_-	hypothetical protein	NA	NA	NA	NA
AUW08551.1\|143499_144462_+	plasmid stabilization protein	A0A222YXF2	Escherichia_phage	9.6e-59	41.1
AUW08414.1\|144475_144862_+	plasmid stability protein	NA	NA	NA	NA
AUW08415.1\|144888_145293_-	FCD domain-containing protein	NA	NA	NA	NA
AUW08416.1\|145494_145836_-	toxin	NA	NA	NA	NA
AUW08417.1\|145856_146174_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
AUW08418.1\|146193_146415_-	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	3.1e-05	38.9
AUW08419.1\|146423_146900_-	hypothetical protein	NA	NA	NA	NA
AUW08420.1\|146915_147374_-	antirestriction protein	NA	NA	NA	NA
AUW08421.1\|147471_147711_-	DUF905 domain-containing protein	NA	NA	NA	NA
AUW08422.1\|147787_148255_-	hypothetical protein	NA	NA	NA	NA
AUW08423.1\|148280_148721_-	hypothetical protein	NA	NA	NA	NA
AUW08424.1\|148720_148960_-	hypothetical protein	NA	NA	NA	NA
AUW08425.1\|148996_149698_-	WYL domain-containing protein	NA	NA	NA	NA
AUW08426.1\|149914_150736_-	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	4.7e-46	38.7
AUW08427.1\|150827_151691_-	hypothetical protein	NA	NA	NA	NA
AUW08428.1\|151993_153010_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	9.8e-187	99.7
AUW08429.1\|153227_153386_+	hypothetical protein	NA	NA	NA	NA
AUW08552.1\|153382_153937_-	cell filamentation protein Fic	NA	NA	NA	NA
AUW08430.1\|154001_155318_-\|integrase	integrase	A0A248SL35	Klebsiella_phage	6.6e-34	29.5
AUW08431.1\|155556_155886_+	acid-resistance protein	NA	NA	NA	NA
AUW08432.1\|155937_156741_-	aquaporin	M1HJ75	Acanthocystis_turfacea_Chlorella_virus	1.6e-14	31.5
AUW08433.1\|156794_158606_-	diol dehydratase reactivase subunit alpha	NA	NA	NA	NA
AUW08434.1\|158616_159045_-	propanediol dehydratase small subunit PduE	NA	NA	NA	NA
AUW08435.1\|159047_159632_-	propanediol dehydratase medium subunit PduD	NA	NA	NA	NA
AUW08436.1\|159643_161311_-	propanediol dehydratase large subunit PduC	NA	NA	NA	NA
AUW08437.1\|161702_162131_+	heme-binding protein	NA	NA	NA	NA
AUW08438.1\|162153_163317_+	1,3-propanediol dehydrogenase	NA	NA	NA	NA
AUW08439.1\|163333_163687_+	hypothetical protein	NA	NA	NA	NA
AUW08440.1\|163687_164218_+	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA
AUW08441.1\|164195_166121_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AUW08442.1\|166212_167310_-	glycerol dehydrogenase	NA	NA	NA	NA
AUW08443.1\|167866_168937_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
AUW08444.1\|168947_169580_+	dihydroxyacetone kinase subunit L	NA	NA	NA	NA
AUW08445.1\|169590_171009_+	dihydroxyacetone kinase subunit DhaM	NA	NA	NA	NA
AUW08446.1\|171083_172733_+	glycerone kinase	NA	NA	NA	NA
AUW08447.1\|172836_173607_-	siderophore-interacting protein	NA	NA	NA	NA
AUW08448.1\|173813_174011_-	hypothetical protein	NA	NA	NA	NA
AUW08449.1\|173989_174655_+	DNA methylase	NA	NA	NA	NA
AUW08450.1\|174651_177225_+	type III restriction endonuclease subunit R	NA	NA	NA	NA
AUW08451.1\|177315_177942_-	inovirus Gp2 family protein	NA	NA	NA	NA
AUW08452.1\|177923_178904_-\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AUW08453.1\|178999_179155_+	hypothetical protein	NA	NA	NA	NA
AUW08553.1\|179151_179706_-	cell filamentation protein Fic	NA	NA	NA	NA
AUW08454.1\|179770_181087_-\|integrase	site-specific integrase	A0A248SL35	Klebsiella_phage	4.6e-35	30.0
AUW08455.1\|181231_181597_-	hypothetical protein	NA	NA	NA	NA
AUW08456.1\|181928_182534_-	hypothetical protein	NA	NA	NA	NA
AUW08457.1\|182544_182967_-	hypothetical protein	NA	NA	NA	NA
AUW08458.1\|183583_184704_-\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8
AUW08459.1\|185302_185983_-	hypothetical protein	NA	NA	NA	NA
184716:185936	attR	NA	NA	NA	NA
AUW08460.1\|186200_186398_+	hypothetical protein	NA	NA	NA	NA
AUW08461.1\|186669_187227_-	single-stranded DNA-binding protein	NA	NA	NA	NA
AUW08462.1\|187864_188896_-\|transposase	IS630-like element ISEc33 family transposase	NA	NA	NA	NA
AUW08463.1\|189317_189770_-	hypothetical protein	NA	NA	NA	NA
AUW08464.1\|189782_190088_-	hypothetical protein	NA	NA	NA	NA
AUW08465.1\|190093_190474_-	hypothetical protein	NA	NA	NA	NA
AUW08466.1\|190700_191585_-	hypothetical protein	NA	NA	NA	NA
AUW08467.1\|191784_192186_-	hypothetical protein	NA	NA	NA	NA
AUW08468.1\|192276_192738_-	hypothetical protein	NA	NA	NA	NA
AUW08554.1\|192812_193010_-	hypothetical protein	NA	NA	NA	NA
AUW08469.1\|193121_193457_-	PerC family transcriptional regulator	NA	NA	NA	NA
AUW08555.1\|193465_193777_-	hypothetical protein	NA	NA	NA	NA
AUW08470.1\|193892_194963_-	phosphohydrolase	H7BVI4	unidentified_phage	6.5e-40	28.4
AUW08471.1\|194955_195279_-	hypothetical protein	NA	NA	NA	NA
AUW08472.1\|195401_196391_+	hypothetical protein	NA	NA	NA	NA
AUW08473.1\|196417_196822_-	hypothetical protein	NA	NA	NA	NA
AUW08474.1\|197148_197700_-	DNA-binding protein	NA	NA	NA	NA
AUW08475.1\|197729_197966_-	hypothetical protein	NA	NA	NA	NA
AUW08476.1\|198043_198334_-	hypothetical protein	NA	NA	NA	NA
AUW08477.1\|198519_198921_-	DNA-binding protein	Q1MVE8	Enterobacteria_phage	3.5e-47	69.9
AUW08478.1\|199469_199961_+	hypothetical protein	NA	NA	NA	NA
AUW08479.1\|200046_200538_-	N-acetyltransferase	NA	NA	NA	NA
AUW08480.1\|200708_200966_-	transcriptional regulator	A0A2I7S995	Vibrio_phage	8.3e-18	65.7
AUW08481.1\|201254_201833_-	hypothetical protein	NA	NA	NA	NA
AUW08482.1\|201947_202838_-	DNA replication protein	NA	NA	NA	NA
AUW08483.1\|202987_204253_-	translesion error-prone DNA polymerase V subunit UmuC	A0A1W6JNT0	Morganella_phage	9.8e-144	60.6
AUW08556.1\|204252_204669_-	translesion error-prone DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	1.0e-36	54.7
AUW08484.1\|204922_205426_+	hypothetical protein	NA	NA	NA	NA
AUW08485.1\|205409_205682_+	hypothetical protein	NA	NA	NA	NA
AUW08486.1\|205782_206805_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUW08487.1\|206828_209867_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	5.0e-295	53.5
AUW08488.1\|210034_210676_+	resolvase	NA	NA	NA	NA
AUW08489.1\|210939_212598_-	CoA-disulfide reductase	NA	NA	NA	NA
AUW08490.1\|212758_213109_+	transcriptional regulator	NA	NA	NA	NA
AUW08491.1\|213413_213890_-	DNA starvation/stationary phase protection protein	G0X506	Salmonella_phage	6.7e-05	28.7
AUW08492.1\|214004_214442_-	PaaI family thioesterase	NA	NA	NA	NA
AUW08493.1\|214602_215064_-	dinitrogenase iron-molybdenum cofactor	NA	NA	NA	NA
AUW08494.1\|215038_215359_-	DUF134 domain-containing protein	NA	NA	NA	NA
AUW08495.1\|215818_216823_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AUW08496.1\|216901_218299_-	DUF4158 domain-containing protein	A0A1B0V7H9	Salmonella_phage	1.3e-117	32.1
AUW08497.1\|218301_218859_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	3.4e-48	81.3
AUW08498.1\|218988_219201_-	DUF3330 domain-containing protein	NA	NA	NA	NA
AUW08557.1\|219163_219283_+	mercury resistance protein	NA	NA	NA	NA
AUW08499.1\|219266_219503_-	mercury resistance protein	NA	NA	NA	NA
AUW08500.1\|219499_219865_-	transcriptional regulator	NA	NA	NA	NA
AUW08501.1\|219882_221568_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1

DBSCAN-SWA_6

225927 : 231362

Wolbachia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08508.1\|225927_226461_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	5.8e-21	33.9
AUW08509.1\|226633_226948_-	hypothetical protein	NA	NA	NA	NA
AUW08510.1\|227202_227559_-	cupin domain-containing protein	NA	NA	NA	NA
AUW08511.1\|227548_227950_-	DUF86 domain-containing protein	NA	NA	NA	NA
AUW08512.1\|227946_228237_-	nucleotidyltransferase	NA	NA	NA	NA
AUW08513.1\|228395_231362_+\|transposase	Tn3-like element ISPa38 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1

DBSCAN-SWA_7

247844 : 256341

uncultured_Caudovirales_phage(60.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08531.1\|247844_250853_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	64.5
AUW08532.1\|251016_251589_+	recombinase	Q1MVP4	Enterobacteria_phage	2.0e-83	89.0
AUW08560.1\|251597_252002_+	arsenical pump-driving ATPase	NA	NA	NA	NA
AUW08533.1\|252032_252458_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.2e-50	70.7
AUW08534.1\|252470_253760_-	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	2.5e-171	73.5
AUW08535.1\|253808_255560_-	arsenical pump-driving ATPase	NA	NA	NA	NA
AUW08536.1\|255577_255940_-	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA
AUW08537.1\|255987_256341_-	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	4.1e-23	50.0

DBSCAN-SWA_8

259343 : 260987

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08540.1\|259343_260987_-	alpha-D-glucose phosphate-specific phosphoglucomutase	A0A1X9I671	Streptococcus_phage	1.5e-22	25.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

7. CP026281

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 5701

unidentified_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08048.1\|1153_1720_+	hypothetical protein	NA	NA	NA	NA
AUW08049.1\|1724_2012_+	hypothetical protein	NA	NA	NA	NA
AUW08050.1\|1996_3097_+	plasmid replication protein	NA	NA	NA	NA
AUW08269.1\|3442_3724_+	hypothetical protein	NA	NA	NA	NA
AUW08270.1\|3744_3930_-	hypothetical protein	NA	NA	NA	NA
AUW08051.1\|4133_4568_-	hypothetical protein	NA	NA	NA	NA
AUW08052.1\|4585_5701_-	phosphohydrolase	H7BVI4	unidentified_phage	6.4e-46	29.1

DBSCAN-SWA_2

9342 : 15197

Wolbachia_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08058.1\|9342_10320_+	S49 family peptidase	Q9JMP1	Wolbachia_phage	7.1e-17	31.5
AUW08059.1\|10335_11196_+	protein-disulfide isomerase	NA	NA	NA	NA
AUW08060.1\|11229_11658_+	hypothetical protein	NA	NA	NA	NA
AUW08061.1\|11714_12074_+	hypothetical protein	A0A076G835	Escherichia_phage	5.6e-20	49.4
AUW08062.1\|12073_12520_+	Fe3+-siderophore ABC transporter permease	NA	NA	NA	NA
AUW08063.1\|12516_13035_+	nitrite reductase	NA	NA	NA	NA
AUW08064.1\|13034_13265_+	hypothetical protein	NA	NA	NA	NA
AUW08065.1\|13251_14109_+	hypothetical protein	NA	NA	NA	NA
AUW08066.1\|14134_14323_+	hypothetical protein	NA	NA	NA	NA
AUW08067.1\|14339_14867_+	nuclease	O64020	Bacillus_phage	1.3e-09	37.0
AUW08068.1\|14924_15197_+	HU family DNA-binding protein	A3E2K9	Sodalis_phage	4.2e-20	59.6

DBSCAN-SWA_3

18826 : 54246

Pseudomonas_phage(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08077.1\|18826_19288_+	DUF1643 domain-containing protein	B5WZV8	Pseudomonas_phage	1.5e-46	60.5
AUW08078.1\|19290_19788_+	hypothetical protein	NA	NA	NA	NA
AUW08079.1\|19891_20155_+	hypothetical protein	NA	NA	NA	NA
AUW08080.1\|20349_21282_+	hypothetical protein	NA	NA	NA	NA
AUW08081.1\|21355_22819_+	ATPase	U5XGM6	Phormidium_phage	2.4e-45	38.2
AUW08082.1\|22974_23304_+	hypothetical protein	NA	NA	NA	NA
AUW08083.1\|23308_23701_+	hypothetical protein	NA	NA	NA	NA
AUW08084.1\|23749_23944_+	hypothetical protein	NA	NA	NA	NA
AUW08085.1\|23937_24936_+	hypothetical protein	NA	NA	NA	NA
AUW08086.1\|24943_25780_-\|transposase	IS5 family transposase ISEc61	NA	NA	NA	NA
AUW08087.1\|26017_26332_+	hypothetical protein	NA	NA	NA	NA
AUW08088.1\|26345_27140_+	APH(3')-II family aminoglycoside O-phosphotransferase	Q75ZG1	Hepacivirus	6.4e-109	74.3
AUW08089.1\|27166_27526_+	BLMT family bleomycin binding protein	NA	NA	NA	NA
AUW08090.1\|27456_27645_+	hypothetical protein	NA	NA	NA	NA
AUW08091.1\|27688_28636_+\|transposase	IS30-like element ISAs2 family transposase	Q9MBM9	Staphylococcus_prophage	1.4e-41	35.7
AUW08273.1\|28718_29867_+	cephalosporin-hydrolyzing class C beta-lactamase FOX-5	NA	NA	NA	NA
AUW08092.1\|30191_31364_+	multidrug transporter MdtL	NA	NA	NA	NA
AUW08093.1\|31382_32345_+	HTH-type transcriptional regulator YidZ	NA	NA	NA	NA
AUW08094.1\|32659_32866_+	hypothetical protein	NA	NA	NA	NA
AUW08095.1\|32956_33904_+\|transposase	IS30-like element ISAs2 family transposase	Q9MBM9	Staphylococcus_prophage	1.4e-41	35.7
AUW08096.1\|34625_34874_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
AUW08097.1\|35000_35576_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	5.6e-46	52.7
AUW08098.1\|35846_36869_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AUW08099.1\|37687_38524_+\|transposase	IS5 family transposase ISEc61	NA	NA	NA	NA
AUW08100.1\|38747_39095_+	hypothetical protein	NA	NA	NA	NA
AUW08101.1\|39091_39520_+	hypothetical protein	NA	NA	NA	NA
AUW08102.1\|39512_39794_+	hypothetical protein	NA	NA	NA	NA
AUW08103.1\|39858_40077_+	hypothetical protein	NA	NA	NA	NA
AUW08104.1\|40088_40658_+	hypothetical protein	NA	NA	NA	NA
AUW08105.1\|40660_41206_+	hypothetical protein	NA	NA	NA	NA
AUW08106.1\|41322_42261_+	chromosome partitioning protein ParB	A0A2P9HXK7	Yersinia_phage	1.5e-69	50.2
AUW08107.1\|42260_42458_+	hypothetical protein	NA	NA	NA	NA
AUW08108.1\|42444_42696_+	hypothetical protein	NA	NA	NA	NA
AUW08109.1\|42695_42938_+	hypothetical protein	NA	NA	NA	NA
AUW08110.1\|42940_43303_+	hypothetical protein	NA	NA	NA	NA
AUW08111.1\|43295_43508_+	hypothetical protein	NA	NA	NA	NA
AUW08112.1\|43567_44323_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	5.8e-59	51.0
AUW08113.1\|44337_45879_-\|transposase	IS21-like element ISAs29 family transposase	K4I413	Acidithiobacillus_phage	4.4e-130	47.6
AUW08114.1\|46123_47158_+	site-specific DNA-methyltransferase	H8ZMF1	Synechococcus_phage	1.0e-05	20.9
AUW08115.1\|47171_47621_+	hypothetical protein	NA	NA	NA	NA
AUW08116.1\|47602_47914_+	hypothetical protein	NA	NA	NA	NA
AUW08117.1\|48087_48873_+	ParA family protein	A0A1X9IGI7	Lactococcus_phage	6.1e-11	26.4
AUW08118.1\|48876_50058_+	chromosome partitioning protein ParB	I3NLC2	Bifidobacterium_phage	2.4e-11	28.7
AUW08119.1\|50106_50379_+	hypothetical protein	NA	NA	NA	NA
AUW08120.1\|50431_51067_-	restriction endonuclease subunit M	NA	NA	NA	NA
AUW08121.1\|51620_51998_+	hypothetical protein	A0A2H4P7P5	Pseudomonas_phage	2.2e-22	49.6
AUW08122.1\|51990_52272_+	hypothetical protein	NA	NA	NA	NA
AUW08123.1\|52246_52921_+	thymidylate kinase	NA	NA	NA	NA
AUW08274.1\|52988_53420_+	hypothetical protein	NA	NA	NA	NA
AUW08124.1\|53404_53737_+	hypothetical protein	NA	NA	NA	NA
AUW08125.1\|53745_54246_+	hypothetical protein	I3UMJ0	Colwellia_phage	1.7e-19	43.3

DBSCAN-SWA_4

57679 : 60766

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08131.1\|57679_57979_+	RNA-binding protein	A0A0K1LLW2	Caulobacter_phage	2.1e-20	55.4
AUW08132.1\|58070_58559_-	hypothetical protein	NA	NA	NA	NA
AUW08133.1\|58573_60766_-	DNA topoisomerase 3	A0A1X9I6W8	Streptococcus_phage	2.9e-42	29.2

DBSCAN-SWA_5

92917 : 97553

Rhizobium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08163.1\|92917_93886_+	CbbQ/NirQ/NorQ/GpvN family protein	L7TKP0	Rhizobium_phage	2.8e-29	32.6
AUW08164.1\|93896_94805_+	hypothetical protein	NA	NA	NA	NA
AUW08165.1\|94865_95396_+	single-stranded DNA-binding protein	A0A291LCB6	Klebsiella_phage	2.6e-42	71.8
AUW08166.1\|95490_96480_+	phage recombination protein Bet	B5AX97	Iodobacteriophage	1.1e-52	39.6
AUW08167.1\|96542_97553_+	endonuclease	E0YQ48	Mycobacterium_phage	5.6e-09	28.7

DBSCAN-SWA_6

106788 : 108414

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08182.1\|106788_108414_+	DNA cytosine methyltransferase	A0A0N9SK84	Staphylococcus_phage	1.2e-05	25.8

DBSCAN-SWA_7

114975 : 118576

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08192.1\|114975_115827_+	NgrC	A0A219UQS0	Bacillus_phage	3.6e-09	29.4
AUW08193.1\|116284_116671_+	hypothetical protein	NA	NA	NA	NA
AUW08276.1\|116848_118576_+	DNA primase	A0A0P0ZFY3	Escherichia_phage	9.9e-14	32.6

DBSCAN-SWA_8

123973 : 161158

Escherichia_phage(26.09%)

transposase,integrase

attL 136677:136736|attR 155555:156416

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08198.1\|123973_124978_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
AUW08199.1\|125056_128029_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
AUW08200.1\|128031_128589_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
AUW08201.1\|128626_128950_-\|transposase	transposase	NA	NA	NA	NA
AUW08202.1\|128894_129908_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AUW08277.1\|130113_130980_+	PSE family carbenicillin-hydrolyzing class A beta-lactamase CARB-2	A0A077SL40	Escherichia_phage	4.8e-57	44.1
AUW08278.1\|131097_131889_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AUW08203.1\|131977_133327_-	group II intron reverse transcriptase/maturase	H7BV81	unidentified_phage	5.2e-10	28.1
AUW08279.1\|134127_135387_+	chloramphenicol efflux MFS transporter	S4TR35	Salmonella_phage	4.8e-26	31.7
AUW08204.1\|135511_136144_+	type B-2 chloramphenicol O-acetyltransferase CatB11	M1HKK6	Paramecium_bursaria_Chlorella_virus	7.1e-26	43.0
AUW08205.1\|136122_136404_+	hypothetical protein	NA	NA	NA	NA
AUW08206.1\|136333_136681_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AUW08207.1\|136674_137514_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
136677:136736	attL	NA	NA	NA	NA
AUW08208.1\|137918_139460_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW08209.1\|139792_140449_+	quinolone resistance pentapeptide repeat protein QnrA1	NA	NA	NA	NA
AUW08210.1\|140648_141488_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AUW08211.1\|141892_143434_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW08212.1\|143699_144200_+	hypothetical protein	A0A1V0SB21	Catovirus	3.3e-10	31.7
AUW08213.1\|144199_144769_+	trimethoprim-resistant dihydrofolate reductase DfrA19	A0A1V0SD48	Indivirus	3.5e-08	27.2
AUW08214.1\|145151_145433_-\|transposase	transposase	NA	NA	NA	NA
AUW08215.1\|145371_146385_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AUW08280.1\|146530_147064_+	aminoglycoside nucleotidyltransferase ANT(2'')-Ia	NA	NA	NA	NA
AUW08216.1\|147146_147779_+	type B-3 chloramphenicol O-acetyltransferase CatB3	A0A2R8FE91	Brazilian_cedratvirus	4.1e-26	41.2
AUW08217.1\|147935_148283_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AUW08218.1\|148276_149116_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AUW08219.1\|149045_149225_-	hypothetical protein	NA	NA	NA	NA
AUW08220.1\|149290_150055_+\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AUW08221.1\|150231_150936_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUW08222.1\|151385_152861_+	ABC-F type ribosomal protection protein Msr(E)	A0A1B0RXA0	Streptococcus_phage	2.3e-160	59.0
AUW08223.1\|152916_153801_+	Mph(E) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
AUW08224.1\|153884_154589_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUW08225.1\|154479_155439_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.7e-47	40.5
AUW08226.1\|155540_156392_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.1e-11	27.2
AUW08227.1\|156321_156501_-	hypothetical protein	NA	NA	NA	NA
155555:156416	attR	NA	NA	NA	NA
AUW08228.1\|156519_157020_+	N-acetyltransferase	NA	NA	NA	NA
AUW08281.1\|157195_157978_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.5e-33	35.0
AUW08229.1\|157967_159491_-\|transposase	IS21 family transposase IS1326	A0A2L1IVA1	Escherichia_phage	1.2e-15	24.2
AUW08230.1\|159613_161158_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.0e-38	34.6

DBSCAN-SWA_9

165142 : 182687

uncultured_Caudovirales_phage(55.56%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08236.1\|165142_166837_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
AUW08237.1\|166875_167301_-	mercury transport protein MerC	NA	NA	NA	NA
AUW08238.1\|167328_167604_-	mercuric transporter periplasmic component	NA	NA	NA	NA
AUW08239.1\|167619_167985_-	mercuric transport protein	NA	NA	NA	NA
AUW08240.1\|168056_168512_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
AUW08241.1\|168848_169202_+	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	4.1e-23	50.0
AUW08242.1\|169249_169612_+	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA
AUW08243.1\|169629_171381_+	arsenical pump-driving ATPase	NA	NA	NA	NA
AUW08244.1\|171429_172719_+	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	2.5e-171	73.5
AUW08245.1\|172731_173157_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.2e-50	70.7
AUW08282.1\|173187_173592_-	arsenical pump-driving ATPase	NA	NA	NA	NA
AUW08246.1\|173600_174173_-	recombinase	Q1MVP4	Enterobacteria_phage	2.0e-83	89.0
AUW08247.1\|175301_176792_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	8.6e-224	82.2
AUW08248.1\|176826_177681_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	1.3e-67	48.6
AUW08249.1\|177771_178104_+	conjugal transfer protein TraR	NA	NA	NA	NA
AUW08250.1\|178221_178842_-	recombinase family protein	E5FFF9	Burkholderia_phage	1.1e-26	37.1
AUW08251.1\|179011_179272_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
AUW08252.1\|179271_179583_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AUW08253.1\|179606_182687_+\|transposase	DDE transposase	A0A1B0V7H9	Salmonella_phage	8.2e-51	30.6

DBSCAN-SWA_10

186210 : 187722

Pseudoalteromonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08258.1\|186210_187722_+	ATP-dependent helicase	A0A2D1GN12	Pseudoalteromonas_phage	3.6e-44	30.7

DBSCAN-SWA_11

195050 : 195323

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW08263.1\|195050_195323_+	nucleotide excision repair protein	A0A2H4J3B6	uncultured_Caudovirales_phage	1.3e-08	41.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage