CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP026320	Vibrio campbellii strain BoB-90 plasmid unnamed 4, complete sequence	0 crisprs	NA	0	1
CP026315	Vibrio campbellii strain BoB-90 chromosome 1, complete sequence	0 crisprs	cas3,csx1,DinG,csa3,DEDDh	0	10
CP026318	Vibrio campbellii strain BoB-90 plasmid unnamed 2, complete sequence	0 crisprs	NA	0	3
CP026319	Vibrio campbellii strain BoB-90 plasmid unnamed 3, complete sequence	0 crisprs	RT	0	0
CP026316	Vibrio campbellii strain BoB-90 chromosome 2, complete sequence	0 crisprs	csa3,cas3	0	4
CP026317	Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence	2 crisprs	cas5,cas7,cas6e,cse2gr11,cas8e	10	2

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

679564 : 686255

Staphylococcus_phage(66.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW02845.1\|679564_680035_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.7e-32	49.3
AUW02846.1\|680204_681314_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	3.0e-64	39.8
AUW02847.1\|681473_682127_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.3e-34	38.0
AUW02848.1\|682138_683263_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.3e-43	35.1
AUW02849.1\|683270_683720_-	transcriptional regulator NrdR	NA	NA	NA	NA
AUW02850.1\|683847_685098_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.6e-99	47.9
AUW02851.1\|685115_686255_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.9e-62	41.4

DBSCAN-SWA_2

770305 : 777377

Megavirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW02916.1\|770305_770731_-	nucleoside-diphosphate kinase	L7Y4C4	Megavirus	2.1e-21	40.6
AUW02917.1\|770831_772130_-	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	9.1e-36	34.7
AUW02918.1\|772302_772497_-	Fe-S assembly protein IscX	NA	NA	NA	NA
AUW02919.1\|772546_772885_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
AUW02920.1\|772898_774752_-	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	9.4e-111	40.4
AUW02921.1\|774773_775289_-	co-chaperone protein HscB	NA	NA	NA	NA
AUW02922.1\|775344_775668_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	1.0e-25	51.4
AUW02923.1\|775741_776125_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	5.4e-53	78.2
AUW02924.1\|776162_777377_-	IscS subfamily cysteine desulfurase	A0A1X7C038	Faustovirus	7.4e-32	30.2

DBSCAN-SWA_3

967652 : 976878

uncultured_Mediterranean_phage(33.33%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW03082.1\|967652_969020_+\|protease	serine endoprotease DegQ	A0A1B1IRD3	uncultured_Mediterranean_phage	4.5e-09	32.9
AUW03083.1\|969224_970280_+	outer membrane-stress sensor serine endopeptidase DegS	A0A1B1IRD3	uncultured_Mediterranean_phage	3.7e-11	33.8
AUW03084.1\|970356_970668_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW03085.1\|970664_971018_+	IS66 family insertion sequence hypothetical protein	S5VXZ8	Leptospira_phage	9.1e-15	44.6
AUW03086.1\|971077_972610_+\|transposase	IS66 family transposase	S5VTP8	Leptospira_phage	1.3e-25	39.5
AUW03087.1\|972705_974994_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	2.0e-86	36.0
AUW03088.1\|974997_976878_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	3.0e-96	35.7

DBSCAN-SWA_4

1822540 : 1881778

Leptospira_phage(22.22%)

integrase,transposase,tRNA

attL 1849191:1849205|attR 1870507:1870521

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW03811.1\|1822540_1823521_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AUW03812.1\|1823684_1823900_+	envelope stress response protein PspG	NA	NA	NA	NA
AUW03813.1\|1824000_1824666_+	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUW03814.1\|1824819_1825050_+	hypothetical protein	NA	NA	NA	NA
AUW03815.1\|1825167_1827042_+	assimilatory sulfite reductase (NADPH) flavoprotein subunit	NA	NA	NA	NA
AUW03816.1\|1827041_1828778_+	sulfite reductase subunit beta	NA	NA	NA	NA
AUW03817.1\|1828770_1829550_+	phosphoadenosine phosphosulfate reductase	NA	NA	NA	NA
AUW03818.1\|1842292_1844107_+	hypothetical protein	NA	NA	NA	NA
AUW03819.1\|1845162_1846695_-\|transposase	IS66 family transposase	S5VTP8	Leptospira_phage	1.3e-25	39.5
AUW03820.1\|1846754_1847108_-	IS66 family insertion sequence hypothetical protein	S5VXZ8	Leptospira_phage	9.1e-15	44.6
AUW03821.1\|1847104_1847416_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW03822.1\|1848157_1849483_-	sodium:proton antiporter	A0A2H4J178	uncultured_Caudovirales_phage	3.1e-39	37.6
1849191:1849205	attL	NA	NA	NA	NA
AUW03823.1\|1849672_1853353_+	methionine synthase	A0A140XBC7	Dickeya_phage	1.1e-20	74.6
AUW03824.1\|1853419_1854772_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
AUW03825.1\|1856343_1857139_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW03826.1\|1857336_1859121_-	ligase	NA	NA	NA	NA
AUW03827.1\|1859188_1862011_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	56.8
AUW03828.1\|1862149_1863022_-	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	2.2e-62	46.0
AUW03829.1\|1863186_1863831_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AUW03830.1\|1864124_1864661_+	single-stranded DNA-binding protein	A0A2I7RHA9	Vibrio_phage	4.5e-58	89.2
AUW03831.1\|1864835_1866161_+\|integrase	site-specific integrase	NA	NA	NA	NA
AUW03832.1\|1866172_1867726_+\|integrase	site-specific integrase	NA	NA	NA	NA
AUW03833.1\|1867718_1870100_+\|integrase	integrase	NA	NA	NA	NA
AUW03834.1\|1870105_1870522_+	hypothetical protein	NA	NA	NA	NA
1870507:1870521	attR	NA	NA	NA	NA
AUW03835.1\|1870527_1871013_+	hypothetical protein	NA	NA	NA	NA
AUW03836.1\|1871009_1873196_+	exonuclease V subunit alpha	A0A0N9S864	Staphylococcus_phage	4.0e-20	27.8
AUW03837.1\|1873565_1873751_-	hypothetical protein	NA	NA	NA	NA
AUW03838.1\|1873750_1874005_-	XRE family transcriptional regulator	NA	NA	NA	NA
AUW03839.1\|1874139_1874394_-	XRE family transcriptional regulator	NA	NA	NA	NA
AUW03840.1\|1874562_1874844_+	hypothetical protein	NA	NA	NA	NA
AUW03841.1\|1875133_1875454_+	hypothetical protein	NA	NA	NA	NA
AUW03842.1\|1875415_1875628_-	hypothetical protein	NA	NA	NA	NA
AUW03843.1\|1875759_1876881_-	hypothetical protein	NA	NA	NA	NA
AUW03844.1\|1876873_1877782_-	hypothetical protein	NA	NA	NA	NA
AUW03845.1\|1878423_1879176_+	hypothetical protein	NA	NA	NA	NA
AUW03846.1\|1879289_1880354_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
AUW03847.1\|1880539_1881778_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	4.7e-90	46.2

DBSCAN-SWA_5

2044755 : 2062225

uncultured_Mediterranean_phage(18.18%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW03992.1\|2044755_2046396_+	CTP synthetase	A0A1J0FA14	Only_Syngen_Nebraska_virus	3.6e-154	52.1
AUW03993.1\|2046474_2047776_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	3.5e-136	60.3
AUW03994.1\|2048369_2048651_+	cell division protein FtsB	NA	NA	NA	NA
AUW03995.1\|2048652_2049363_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	A0A2H4UTB4	Bodo_saltans_virus	2.4e-06	24.0
AUW03996.1\|2049377_2049854_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
AUW03997.1\|2049899_2050943_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
AUW03998.1\|2050942_2051719_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.2e-67	53.7
AUW03999.1\|2051718_2052345_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.8e-37	53.9
AUW04000.1\|2052359_2053283_+	hypothetical protein	D7RWE0	Brochothrix_phage	2.4e-06	36.4
AUW04001.1\|2053363_2054350_+	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	6.9e-36	35.2
AUW04002.1\|2054438_2057000_-	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	1.7e-33	22.7
AUW04003.1\|2057085_2057568_+	damage-inducible protein CinA	B5TK85	Pseudomonas_phage	2.4e-26	47.5
AUW04004.1\|2057768_2058812_+	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	3.1e-111	60.4
AUW04005.1\|2059017_2059485_+	recombination regulator RecX	NA	NA	NA	NA
AUW04006.1\|2059627_2062225_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	7.3e-77	37.5

DBSCAN-SWA_6

2684058 : 2753662

Bacillus_phage(20.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW04538.1\|2684058_2684854_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW04539.1\|2685311_2686466_+	hypothetical protein	NA	NA	NA	NA
AUW04540.1\|2686462_2688550_+	hypothetical protein	W8CYL7	Bacillus_phage	3.5e-13	22.5
AUW04541.1\|2688542_2689379_+	hypothetical protein	NA	NA	NA	NA
AUW04542.1\|2689874_2691404_-\|transposase	IS66 family transposase	S5VTP8	Leptospira_phage	1.3e-25	39.5
AUW04543.1\|2691463_2691817_-	IS66 family insertion sequence hypothetical protein	S5VXZ8	Leptospira_phage	2.0e-14	44.6
AUW04544.1\|2691813_2692131_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW04545.1\|2692745_2693541_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW04546.1\|2693626_2694109_+	hypothetical protein	NA	NA	NA	NA
AUW04547.1\|2694071_2694602_+	hypothetical protein	NA	NA	NA	NA
AUW04548.1\|2694696_2696139_-	pyruvate kinase	NA	NA	NA	NA
AUW04549.1\|2696458_2697676_+	ROK family protein	NA	NA	NA	NA
AUW04550.1\|2697912_2698854_+	chemotaxis protein CheV	Q56AR1	Bacillus_thuringiensis_phage	2.0e-29	30.6
AUW04551.1\|2699202_2702277_-	error-prone DNA polymerase	A0A0K1Y9G6	Streptomyces_phage	2.9e-80	25.8
AUW04552.1\|2702304_2703708_-	nucleotidyltransferase	NA	NA	NA	NA
AUW04553.1\|2703712_2704405_-	recombinase RecA	NA	NA	NA	NA
AUW04554.1\|2704536_2705283_-	YciK family oxidoreductase	NA	NA	NA	NA
AUW04555.1\|2705561_2706623_+\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	2.6e-20	34.8
AUW04556.1\|2706833_2707514_+	cytidylate kinase	NA	NA	NA	NA
AUW04557.1\|2707624_2709295_+	30S ribosomal protein S1	NA	NA	NA	NA
AUW04558.1\|2709508_2709793_+	integration host factor subunit beta	A0A0H3UZA0	Geobacillus_virus	3.2e-10	36.7
AUW04559.1\|2709933_2710227_+	DUF1049 domain-containing protein	NA	NA	NA	NA
AUW04560.1\|2710245_2711421_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
AUW04561.1\|2711503_2712205_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
AUW04562.1\|2712629_2714477_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUW04563.1\|2714555_2714795_-	hypothetical protein	NA	NA	NA	NA
AUW04564.1\|2714943_2715426_-	polyketide cyclase	NA	NA	NA	NA
AUW05409.1\|2715510_2716290_-	hypothetical protein	NA	NA	NA	NA
AUW04565.1\|2716492_2717062_-	hypothetical protein	NA	NA	NA	NA
AUW04566.1\|2717061_2718708_-	MCE family protein	NA	NA	NA	NA
AUW04567.1\|2718700_2720032_-	paraquat-inducible protein A	NA	NA	NA	NA
AUW05410.1\|2720165_2721170_-	DNA-binding transcriptional regulator GalS	NA	NA	NA	NA
AUW04568.1\|2721360_2724453_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	2.1e-309	52.4
AUW04569.1\|2724543_2725419_-	hypothetical protein	NA	NA	NA	NA
AUW04570.1\|2725488_2726730_-	maltoporin	NA	NA	NA	NA
AUW04571.1\|2727289_2727529_-	hypothetical protein	NA	NA	NA	NA
AUW04572.1\|2727568_2729686_+	alpha-galactosidase	NA	NA	NA	NA
AUW04573.1\|2730081_2731461_+	melibiose:sodium transporter MelB	NA	NA	NA	NA
AUW04574.1\|2731562_2732462_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUW04575.1\|2732691_2733000_+	hypothetical protein	NA	NA	NA	NA
AUW04576.1\|2733062_2735174_+	cytochrome C biogenesis protein	NA	NA	NA	NA
AUW04577.1\|2735170_2735683_+	protein disulfide oxidoreductase	NA	NA	NA	NA
AUW04578.1\|2735788_2736418_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AUW04579.1\|2736981_2737962_+	hypothetical protein	NA	NA	NA	NA
AUW04580.1\|2737954_2738551_+	hypothetical protein	NA	NA	NA	NA
AUW04581.1\|2738592_2739388_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW04582.1\|2740122_2740626_+	hypothetical protein	NA	NA	NA	NA
AUW04583.1\|2740633_2742253_+	hypothetical protein	W8CYL7	Bacillus_phage	1.2e-37	27.0
AUW04584.1\|2742276_2742711_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUW04585.1\|2742785_2743556_+	phospholipase	NA	NA	NA	NA
AUW04586.1\|2743601_2744126_+	N-acetyltransferase	NA	NA	NA	NA
AUW04587.1\|2744419_2745553_+	toxin	NA	NA	NA	NA
AUW04588.1\|2745763_2746612_+	MBL fold hydrolase	NA	NA	NA	NA
AUW04589.1\|2746779_2747916_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AUW04590.1\|2747908_2749180_+	TolC family protein	NA	NA	NA	NA
AUW04591.1\|2749176_2750421_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUW04592.1\|2750423_2751707_+	peptide ABC transporter permease	NA	NA	NA	NA
AUW04593.1\|2751699_2752419_+	macrolide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-41	43.2
AUW04594.1\|2752678_2753662_+\|protease	YopT-type cysteine protease domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_7

2913061 : 2939689

Leptospira_phage(57.14%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW04724.1\|2913061_2914591_-\|transposase	IS66 family transposase	S5VTP8	Leptospira_phage	1.9e-24	38.9
AUW04725.1\|2914650_2915004_-	IS66 family insertion sequence hypothetical protein	S5VXZ8	Leptospira_phage	2.0e-14	44.6
AUW04726.1\|2915000_2915318_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW04727.1\|2916244_2917129_+	hypothetical protein	NA	NA	NA	NA
AUW04728.1\|2917262_2917751_+	hypothetical protein	NA	NA	NA	NA
AUW04729.1\|2917777_2917870_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04730.1\|2917916_2918231_+	ASCH domain-containing protein	NA	NA	NA	NA
AUW05417.1\|2918268_2918379_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04731.1\|2918359_2918977_+	YdcF family protein	NA	NA	NA	NA
AUW04732.1\|2918967_2919084_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW05419.1\|2919116_2919491_+	hypothetical protein	NA	NA	NA	NA
AUW05418.1\|2919487_2919598_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04733.1\|2919629_2920088_+	N-acetyltransferase	NA	NA	NA	NA
AUW05420.1\|2920723_2920813_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04734.1\|2920840_2921308_+	NUDIX hydrolase	NA	NA	NA	NA
AUW04735.1\|2921282_2921423_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04736.1\|2921999_2922482_+	hypothetical protein	NA	NA	NA	NA
AUW04737.1\|2922749_2922953_+	hypothetical protein	NA	NA	NA	NA
AUW05421.1\|2923121_2923211_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04738.1\|2923597_2924449_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	8.8e-56	44.7
AUW04739.1\|2924569_2925127_+	hypothetical protein	NA	NA	NA	NA
AUW05422.1\|2925144_2925354_+	hypothetical protein	NA	NA	NA	NA
AUW04740.1\|2925515_2925818_+	hypothetical protein	NA	NA	NA	NA
AUW04741.1\|2925821_2925932_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04742.1\|2926318_2927170_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	8.8e-56	44.7
AUW04743.1\|2927223_2927565_+	hypothetical protein	NA	NA	NA	NA
AUW04744.1\|2927841_2928045_+	hypothetical protein	NA	NA	NA	NA
AUW05423.1\|2928213_2928303_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04745.1\|2928332_2929028_+	hypothetical protein	NA	NA	NA	NA
AUW04746.1\|2929036_2929147_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04747.1\|2929645_2930614_-\|transposase	IS30-like element ISVa6 family transposase	W5R8L2	Staphylococcus_phage	3.3e-43	37.5
AUW05424.1\|2930644_2930821_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04748.1\|2931239_2931368_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04749.1\|2931375_2931693_-	plasmid maintenance protein CcdB	NA	NA	NA	NA
AUW04750.1\|2931692_2931938_-	plasmid maintenance protein CcdB	NA	NA	NA	NA
AUW04751.1\|2931979_2932105_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04752.1\|2932141_2932453_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AUW04753.1\|2932949_2933078_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04754.1\|2933104_2933512_+	hypothetical protein	NA	NA	NA	NA
AUW05425.1\|2933540_2933630_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW05426.1\|2933658_2934123_+	hypothetical protein	NA	NA	NA	NA
AUW04755.1\|2934263_2934761_-	N-acetyltransferase	NA	NA	NA	NA
AUW04756.1\|2934757_2935030_-	DUF1778 domain-containing protein	NA	NA	NA	NA
AUW05427.1\|2935070_2935232_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04757.1\|2935325_2935745_+	hypothetical protein	NA	NA	NA	NA
AUW04758.1\|2935756_2935909_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04759.1\|2935898_2937428_-\|transposase	IS66 family transposase	S5VTP8	Leptospira_phage	1.9e-24	38.9
AUW04760.1\|2937487_2937841_-	IS66 family insertion sequence hypothetical protein	S5VXZ8	Leptospira_phage	2.0e-14	44.6
AUW04761.1\|2937837_2938155_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW04762.1\|2938412_2938868_+	DUF2778 domain-containing protein	NA	NA	NA	NA
AUW04763.1\|2938893_2939689_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

2944182 : 2975879

Leptospira_phage(37.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW04771.1\|2944182_2945034_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	8.8e-56	44.7
AUW05431.1\|2945084_2945597_+	hypothetical protein	NA	NA	NA	NA
AUW05430.1\|2945578_2945704_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04772.1\|2945735_2946362_+	hypothetical protein	NA	NA	NA	NA
AUW04773.1\|2946376_2946469_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04774.1\|2946505_2946931_+	riboflavin-specific deaminase	A0A2I2L4R9	Orpheovirus	1.3e-20	41.3
AUW04775.1\|2947067_2947427_+	hypothetical protein	NA	NA	NA	NA
AUW04776.1\|2947348_2947543_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04777.1\|2947570_2948035_+	hypothetical protein	NA	NA	NA	NA
AUW05432.1\|2948537_2948654_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04778.1\|2949226_2950756_-\|transposase	IS66 family transposase	S5VTP8	Leptospira_phage	1.9e-24	38.9
AUW04779.1\|2950815_2951169_-	IS66 family insertion sequence hypothetical protein	S5VXZ8	Leptospira_phage	2.0e-14	44.6
AUW04780.1\|2951165_2951483_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW04781.1\|2951811_2952138_+	hypothetical protein	NA	NA	NA	NA
AUW04782.1\|2952309_2952630_+	hypothetical protein	NA	NA	NA	NA
AUW04783.1\|2952780_2953377_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AUW04784.1\|2953514_2953814_+	hypothetical protein	NA	NA	NA	NA
AUW04785.1\|2953973_2954291_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW04786.1\|2954287_2954641_+	IS66 family insertion sequence hypothetical protein	S5VXZ8	Leptospira_phage	2.0e-14	44.6
AUW04787.1\|2954941_2956180_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	4.7e-90	46.2
AUW04788.1\|2957717_2958302_+	hypothetical protein	NA	NA	NA	NA
AUW04789.1\|2958419_2959658_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	4.7e-90	46.2
AUW04790.1\|2959840_2960512_+	hypothetical protein	NA	NA	NA	NA
AUW04791.1\|2960532_2960646_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04792.1\|2960709_2961009_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AUW04793.1\|2961016_2961259_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
AUW05433.1\|2961333_2961462_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04794.1\|2961501_2962284_+	hypothetical protein	NA	NA	NA	NA
AUW04795.1\|2962438_2963413_+	hypothetical protein	NA	NA	NA	NA
AUW04796.1\|2963438_2964407_-\|transposase	IS30-like element ISVa6 family transposase	W5R8L2	Staphylococcus_phage	3.3e-43	37.5
AUW05434.1\|2964871_2965486_+	HNH endonuclease	NA	NA	NA	NA
AUW04797.1\|2965454_2965592_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04798.1\|2965618_2965921_+	hypothetical protein	NA	NA	NA	NA
AUW04799.1\|2965917_2966028_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04800.1\|2966624_2967119_+	hypothetical protein	NA	NA	NA	NA
AUW04801.1\|2967840_2968329_+	hypothetical protein	NA	NA	NA	NA
AUW04802.1\|2968315_2968447_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04803.1\|2968702_2969746_-\|transposase	IS630 family transposase	NA	NA	NA	NA
AUW04804.1\|2970031_2970439_+	hypothetical protein	NA	NA	NA	NA
AUW05435.1\|2970444_2970561_+	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW04805.1\|2970671_2971190_+	hypothetical protein	NA	NA	NA	NA
AUW04806.1\|2971182_2971599_+	hypothetical protein	NA	NA	NA	NA
AUW04807.1\|2971624_2972420_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW04808.1\|2972623_2973034_+	hypothetical protein	NA	NA	NA	NA
AUW04809.1\|2973764_2974298_+	hypothetical protein	NA	NA	NA	NA
AUW05436.1\|2974338_2974548_+	hypothetical protein	NA	NA	NA	NA
AUW04810.1\|2974664_2974937_+	hypothetical protein	NA	NA	NA	NA
AUW04811.1\|2975083_2975879_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

3097253 : 3165365

Tupanvirus(20.0%)

protease,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW04911.1\|3097253_3098846_+\|protease	alkaline serine protease	A0A2K9L1P3	Tupanvirus	9.8e-32	32.8
AUW04912.1\|3099026_3100475_+	peptidase	NA	NA	NA	NA
AUW04913.1\|3100982_3101372_+	hypothetical protein	NA	NA	NA	NA
AUW04914.1\|3101435_3102231_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW04915.1\|3102504_3104040_-	hypothetical protein	NA	NA	NA	NA
AUW04916.1\|3104692_3104950_+	hypothetical protein	NA	NA	NA	NA
AUW04917.1\|3105419_3105731_+	Fis family transcriptional regulator	NA	NA	NA	NA
AUW04918.1\|3105857_3106196_-	cytosolic protein	NA	NA	NA	NA
AUW04919.1\|3106393_3107581_-	hypothetical protein	NA	NA	NA	NA
AUW04920.1\|3107789_3108794_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
AUW04921.1\|3108790_3109408_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
AUW04922.1\|3109823_3111332_+	DUF3360 domain-containing protein	NA	NA	NA	NA
AUW04923.1\|3111542_3112172_-	hypothetical protein	NA	NA	NA	NA
AUW04924.1\|3112174_3114193_-	DNA helicase	NA	NA	NA	NA
AUW04925.1\|3114617_3115952_-\|transposase	IS4 family transposase	NA	NA	NA	NA
AUW04926.1\|3116083_3117235_-	ABC transporter	NA	NA	NA	NA
AUW04927.1\|3117231_3118419_-	multidrug ABC transporter permease	NA	NA	NA	NA
AUW04928.1\|3118437_3119418_-	hypothetical protein	NA	NA	NA	NA
AUW04929.1\|3119421_3120813_-	hypothetical protein	NA	NA	NA	NA
AUW04930.1\|3120966_3121194_-	hypothetical protein	NA	NA	NA	NA
AUW05441.1\|3122051_3123671_+	histidine kinase	NA	NA	NA	NA
AUW04931.1\|3123667_3124354_+	two-component system response regulator	NA	NA	NA	NA
AUW04932.1\|3124996_3126502_+	glucose-6-phosphate dehydrogenase	M4SIY3	Cyanophage	4.8e-89	38.5
AUW04933.1\|3126498_3127215_+	6-phosphogluconolactonase	NA	NA	NA	NA
AUW04934.1\|3127255_3128704_+	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	E3SJC4	Synechococcus_phage	4.7e-33	32.0
AUW04935.1\|3128903_3129143_+	hypothetical protein	NA	NA	NA	NA
AUW04936.1\|3129139_3129673_+	hypothetical protein	NA	NA	NA	NA
AUW04937.1\|3129695_3129902_-	hypothetical protein	NA	NA	NA	NA
AUW04938.1\|3130175_3131696_+	hypothetical protein	NA	NA	NA	NA
AUW04939.1\|3131794_3132697_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUW04940.1\|3133239_3135003_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AUW04941.1\|3135251_3136772_+	aldehyde dehydrogenase	NA	NA	NA	NA
AUW04942.1\|3136997_3137969_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUW04943.1\|3138065_3138836_-	permease	NA	NA	NA	NA
AUW04944.1\|3138990_3140517_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
AUW04945.1\|3140537_3141038_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
AUW04946.1\|3141252_3142230_-	tripartite tricarboxylate transporter substrate-binding protein	NA	NA	NA	NA
AUW04947.1\|3142515_3142914_+	GFA family protein	NA	NA	NA	NA
AUW04948.1\|3143117_3143606_-	prepilin-type cleavage/methylation domain-containing protein	NA	NA	NA	NA
AUW04949.1\|3144123_3147252_+	phosphohydrolase	NA	NA	NA	NA
AUW05442.1\|3147453_3150597_+	phosphohydrolase	NA	NA	NA	NA
AUW04950.1\|3150623_3151340_-	protein kinase	A0A1V0SBS0	Catovirus	4.6e-05	41.5
AUW04951.1\|3151342_3154732_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AUW04952.1\|3154728_3155982_-	hypothetical protein	NA	NA	NA	NA
AUW04953.1\|3155988_3157320_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AUW04954.1\|3157346_3157829_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AUW04955.1\|3157828_3158764_-	hypothetical protein	NA	NA	NA	NA
AUW04956.1\|3158767_3159496_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUW04957.1\|3159583_3162190_-	type VI secretion system ATPase TssH	A0A248SJW6	Salicola_phage	1.2e-82	27.7
AUW05443.1\|3162247_3163177_-	hypothetical protein	NA	NA	NA	NA
AUW04958.1\|3163198_3164950_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AUW04959.1\|3164942_3165365_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_10

3383377 : 3457174

Tupanvirus(25.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW05130.1\|3383377_3385087_-\|protease	alkaline protease	A0A2K9L1P3	Tupanvirus	1.7e-21	32.0
AUW05131.1\|3385291_3388249_-	peptidase M66	NA	NA	NA	NA
AUW05132.1\|3388890_3389982_-	choloylglycine hydrolase	A0A1J0F9I3	Only_Syngen_Nebraska_virus	1.1e-31	29.8
AUW05133.1\|3390133_3390559_-	hypothetical protein	NA	NA	NA	NA
AUW05456.1\|3390564_3391032_-	hypothetical protein	NA	NA	NA	NA
AUW05455.1\|3391003_3391615_-	winged helix family transcriptional regulator	NA	NA	NA	NA
AUW05134.1\|3391859_3392414_+	hypothetical protein	NA	NA	NA	NA
AUW05457.1\|3392476_3392950_+	hypothetical protein	NA	NA	NA	NA
AUW05135.1\|3392946_3395715_+	hypothetical protein	NA	NA	NA	NA
AUW05136.1\|3395717_3396419_+	hypothetical protein	NA	NA	NA	NA
AUW05137.1\|3396415_3397456_+	hypothetical protein	NA	NA	NA	NA
AUW05138.1\|3397455_3398247_+	hypothetical protein	NA	NA	NA	NA
AUW05139.1\|3398500_3400822_-	hypothetical protein	NA	NA	NA	NA
AUW05140.1\|3400836_3403194_-	hypothetical protein	NA	NA	NA	NA
AUW05141.1\|3403358_3403613_-	hypothetical protein	NA	NA	NA	NA
AUW05142.1\|3403986_3404595_+	HD domain-containing protein	NA	NA	NA	NA
AUW05143.1\|3404939_3405875_+	universal stress protein	NA	NA	NA	NA
AUW05144.1\|3406375_3407869_-	chitin-binding protein	A0A1D8QLC2	Trichoplusia_ni_granulovirus	1.7e-22	32.5
AUW05145.1\|3408364_3408790_-	hypothetical protein	NA	NA	NA	NA
AUW05146.1\|3408994_3409948_+	hypothetical protein	NA	NA	NA	NA
AUW05147.1\|3410023_3410959_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUW05148.1\|3411122_3412418_-	MltA-interacting MipA family protein	NA	NA	NA	NA
AUW05149.1\|3412665_3415725_-	AcrB/AcrD/AcrF family protein	NA	NA	NA	NA
AUW05150.1\|3415726_3416851_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AUW05151.1\|3416909_3417152_-	hypothetical protein	NA	NA	NA	NA
AUW05152.1\|3417470_3418670_+	sodium/glutamate symporter	NA	NA	NA	NA
AUW05153.1\|3419186_3419525_-	hypothetical protein	NA	NA	NA	NA
AUW05154.1\|3419671_3420334_-	hypothetical protein	NA	NA	NA	NA
AUW05155.1\|3420518_3421187_-	maleylacetoacetate isomerase	NA	NA	NA	NA
AUW05156.1\|3421207_3422245_-	2-keto-4-pentenoate hydratase	NA	NA	NA	NA
AUW05157.1\|3422254_3423385_-	homogentisate 1,2-dioxygenase	NA	NA	NA	NA
AUW05158.1\|3423377_3424451_-	4-hydroxyphenylpyruvate dioxygenase	NA	NA	NA	NA
AUW05159.1\|3424839_3425304_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AUW05160.1\|3425893_3427000_+	peptidase M20	NA	NA	NA	NA
AUW05161.1\|3427146_3427338_-	hypothetical protein	NA	NA	NA	NA
AUW05162.1\|3428477_3428783_+	hypothetical protein	NA	NA	NA	NA
AUW05163.1\|3428801_3430046_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW05164.1\|3433131_3433560_+	hypothetical protein	NA	NA	NA	NA
AUW05165.1\|3433569_3434244_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
AUW05166.1\|3434312_3435479_-	MFS transporter TsgA	NA	NA	NA	NA
AUW05167.1\|3435566_3436274_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
AUW05458.1\|3436627_3443311_-	hypothetical protein	NA	NA	NA	NA
AUW05168.1\|3443354_3444150_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW05169.1\|3444636_3445608_-	hypothetical protein	NA	NA	NA	NA
AUW05170.1\|3445808_3446852_+\|transposase	IS630 family transposase	NA	NA	NA	NA
AUW05171.1\|3447004_3448126_-	GGDEF domain-containing protein	NA	NA	NA	NA
AUW05172.1\|3448322_3449489_-	23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF	NA	NA	NA	NA
AUW05173.1\|3449475_3449991_-	M48 family peptidase	NA	NA	NA	NA
AUW05174.1\|3450142_3450415_-	hypothetical protein	NA	NA	NA	NA
AUW05175.1\|3450561_3452490_-	hypothetical protein	NA	NA	NA	NA
AUW05176.1\|3452990_3453786_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW05177.1\|3454156_3454648_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	A0A088F7U0	Vibrio_phage	7.0e-05	50.0
AUW05178.1\|3454909_3455137_+	glutaredoxin family protein	NA	NA	NA	NA
AUW05179.1\|3456378_3457174_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP026320

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6187 : 31789

Staphylococcus_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW07699.1\|6187_7231_-\|transposase	IS630 family transposase	NA	NA	NA	NA
AUW07700.1\|7300_7885_-	hypothetical protein	NA	NA	NA	NA
AUW07701.1\|7923_8055_-	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW07702.1\|8018_8444_+	hypothetical protein	NA	NA	NA	NA
AUW07703.1\|8750_9719_+\|transposase	IS30-like element ISVa6 family transposase	W5R8L2	Staphylococcus_phage	3.3e-43	37.5
AUW07704.1\|10258_10390_-	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW07705.1\|10595_10805_-	hypothetical protein	NA	NA	NA	NA
AUW07706.1\|10878_11004_-	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW07707.1\|11256_11751_+	hypothetical protein	NA	NA	NA	NA
AUW07708.1\|11909_12452_-	hypothetical protein	NA	NA	NA	NA
AUW07745.1\|12484_12607_-	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW07746.1\|12615_13203_-	DUF1294 domain-containing protein	NA	NA	NA	NA
AUW07709.1\|13363_13867_-	hypothetical protein	NA	NA	NA	NA
AUW07710.1\|13893_14025_-	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW07711.1\|14111_14462_+	hypothetical protein	NA	NA	NA	NA
AUW07747.1\|14513_14690_-	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW07712.1\|14720_15689_+\|transposase	IS30-like element ISVa6 family transposase	W5R8L2	Staphylococcus_phage	3.3e-43	37.5
AUW07713.1\|15721_16483_-	hypothetical protein	NA	NA	NA	NA
AUW07714.1\|16526_16613_-	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW07715.1\|16584_17381_-\|transposase	IS5/IS1182 family transposase	A0A0M5M147	Mycobacterium_phage	5.4e-31	36.9
AUW07748.1\|17411_17510_-	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW07716.1\|17546_17750_+	hypothetical protein	NA	NA	NA	NA
AUW07717.1\|17998_18121_-	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW07718.1\|18117_18417_-	hypothetical protein	NA	NA	NA	NA
AUW07719.1\|19619_20416_-\|transposase	IS5/IS1182 family transposase	A0A0M5M147	Mycobacterium_phage	5.4e-31	36.9
AUW07720.1\|20457_20859_-	hydrolase	NA	NA	NA	NA
AUW07749.1\|21002_21500_-	hypothetical protein	NA	NA	NA	NA
AUW07721.1\|21877_22729_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	8.8e-56	44.7
AUW07722.1\|23777_24407_-	hypothetical protein	NA	NA	NA	NA
AUW07723.1\|24434_24566_-	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW07724.1\|24652_24916_+	hypothetical protein	NA	NA	NA	NA
AUW07725.1\|25179_25971_-	phenazine biosynthesis protein PhzF	NA	NA	NA	NA
AUW07726.1\|26003_26135_-	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW07727.1\|26622_26715_-	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW07728.1\|26729_27026_-	hypothetical protein	NA	NA	NA	NA
AUW07729.1\|27279_27768_-	1-deoxy-D-xylulose-5-phosphate synthase	A0A2H4JFX6	uncultured_Caudovirales_phage	8.1e-46	51.6
AUW07730.1\|27964_28249_+	damage-inducible protein J	NA	NA	NA	NA
AUW07731.1\|28245_28524_+	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA
AUW07732.1\|28552_28684_-	DUF3265 domain-containing protein	NA	NA	NA	NA
AUW07733.1\|29068_30112_+\|transposase	IS630 family transposase	NA	NA	NA	NA
AUW07734.1\|30259_31789_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	3.0e-70	34.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP026318

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 2007

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW07519.1\|351_708_+	hypothetical protein	NA	NA	NA	NA
AUW07520.1\|697_1207_+	hypothetical protein	A0A222YY05	Escherichia_phage	7.7e-15	32.0
AUW07521.1\|1209_2007_+	hypothetical protein	Q71TC9	Escherichia_phage	1.1e-23	32.2

DBSCAN-SWA_2

5201 : 50035

Vibrio_phage(40.91%)

integrase

attL 23047:23061|attR 53426:53440

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW07524.1\|5201_6626_+	lipopolysaccharide biosynthesis protein BplA	A0A222YWB2	Escherichia_phage	2.1e-57	33.6
AUW07525.1\|6737_8141_+	hypothetical protein	NA	NA	NA	NA
AUW07526.1\|8145_8583_+	hypothetical protein	NA	NA	NA	NA
AUW07527.1\|8586_9141_+	hypothetical protein	NA	NA	NA	NA
AUW07528.1\|9254_9857_+	hypothetical protein	O21969	Escherichia_phage	1.5e-09	34.5
AUW07529.1\|9853_11365_+	hypothetical protein	Q1MVM7	Enterobacteria_phage	7.9e-15	28.0
AUW07530.1\|11370_11682_+	hypothetical protein	NA	NA	NA	NA
AUW07531.1\|11656_13423_+	hypothetical protein	A0A077SK08	Escherichia_phage	3.0e-05	23.8
AUW07602.1\|13464_13704_-	hypothetical protein	NA	NA	NA	NA
AUW07532.1\|14180_14933_-	hypothetical protein	NA	NA	NA	NA
AUW07533.1\|15128_22175_+	hypothetical protein	Q1MVN7	Enterobacteria_phage	4.2e-284	35.2
AUW07534.1\|22262_22679_+	hypothetical protein	NA	NA	NA	NA
AUW07535.1\|22824_24489_+	hypothetical protein	A0A222YXQ7	Escherichia_phage	3.0e-76	33.9
23047:23061	attL	NA	NA	NA	NA
AUW07536.1\|24481_25513_+	hypothetical protein	A0A1B0V7I1	Salmonella_phage	3.6e-27	31.6
AUW07537.1\|25632_25968_-	hypothetical protein	NA	NA	NA	NA
AUW07538.1\|25960_26635_-	cobyrinic acid ac-diamide synthase	Q2A085	Sodalis_phage	7.8e-23	35.1
AUW07539.1\|27275_28322_+	replication initiation protein	NA	NA	NA	NA
AUW07540.1\|28516_29359_-	hypothetical protein	Q1MVI4	Enterobacteria_phage	3.0e-24	30.1
AUW07541.1\|29360_29621_-	hypothetical protein	NA	NA	NA	NA
AUW07542.1\|29638_30001_-	hypothetical protein	NA	NA	NA	NA
AUW07543.1\|29990_30356_-	hypothetical protein	A0A0K1LK36	Vibrio_phage	1.2e-14	45.6
AUW07544.1\|30561_30843_+	hypothetical protein	NA	NA	NA	NA
AUW07545.1\|31031_31448_+	hypothetical protein	NA	NA	NA	NA
AUW07546.1\|31475_32387_+	recombination-associated protein RdgC	A0A2I7RNT5	Vibrio_phage	1.4e-99	58.7
AUW07547.1\|32377_33166_+	hypothetical protein	NA	NA	NA	NA
AUW07548.1\|33230_33581_+	hypothetical protein	NA	NA	NA	NA
AUW07549.1\|34260_34800_+	hypothetical protein	NA	NA	NA	NA
AUW07603.1\|34989_35343_+	hypothetical protein	R9TNL4	Vibrio_phage	1.4e-15	40.4
AUW07550.1\|35390_35636_-	hypothetical protein	NA	NA	NA	NA
AUW07551.1\|35693_36017_-	hypothetical protein	Q6V7U0	Burkholderia_virus	1.1e-06	30.5
AUW07552.1\|36076_36895_-	hypothetical protein	A0A1I9KF44	Aeromonas_phage	4.7e-30	41.0
AUW07553.1\|36905_37502_-	hypothetical protein	NA	NA	NA	NA
AUW07554.1\|37550_38741_-	hypothetical protein	NA	NA	NA	NA
AUW07555.1\|38792_38990_-	hypothetical protein	NA	NA	NA	NA
AUW07556.1\|39066_39291_-	hypothetical protein	NA	NA	NA	NA
AUW07557.1\|39462_40638_+\|integrase	integrase	A0A067ZJC5	Vibrio_phage	1.9e-69	38.7
AUW07558.1\|40733_41246_+	hypothetical protein	A0A2I7RSZ7	Vibrio_phage	5.9e-07	32.1
AUW07559.1\|41295_42303_+	nucleoid-associated protein YejK	A0A1V0E8C0	Vibrio_phage	2.3e-127	67.2
AUW07604.1\|42341_42668_+	hypothetical protein	A0A2I7QIG7	Vibrio_phage	4.0e-17	58.0
AUW07560.1\|42677_42905_+	hypothetical protein	NA	NA	NA	NA
AUW07561.1\|42928_43237_-	hypothetical protein	NA	NA	NA	NA
AUW07562.1\|43550_43799_+	hypothetical protein	NA	NA	NA	NA
AUW07563.1\|43866_44298_+	hypothetical protein	K7RVN3	Vibrio_phage	1.4e-30	53.3
AUW07564.1\|44294_44693_+	hypothetical protein	NA	NA	NA	NA
AUW07565.1\|44679_44889_+	hypothetical protein	NA	NA	NA	NA
AUW07566.1\|44875_45307_+	hypothetical protein	NA	NA	NA	NA
AUW07605.1\|45766_46486_+	hypothetical protein	NA	NA	NA	NA
AUW07567.1\|46475_48194_+	protein PacB	Q71T61	Escherichia_phage	1.9e-94	39.9
AUW07568.1\|48824_49379_+	hypothetical protein	A0A2I7R6M5	Vibrio_phage	4.9e-23	36.9
AUW07569.1\|49444_50035_+\|integrase	integrase	A0A2H4J6I5	uncultured_Caudovirales_phage	5.6e-25	39.7
53426:53440	attR	NA	NA	NA	NA

DBSCAN-SWA_3

55414 : 74019

Escherichia_phage(54.55%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW07578.1\|55414_56554_+	hypothetical protein	A0A2I7QY74	Vibrio_phage	4.2e-37	33.9
AUW07579.1\|56652_57066_+	hypothetical protein	A0A2I7RNG1	Vibrio_phage	3.6e-23	43.6
AUW07580.1\|57393_57681_+	hypothetical protein	NA	NA	NA	NA
AUW07581.1\|57684_57900_+	hypothetical protein	NA	NA	NA	NA
AUW07582.1\|57983_58331_+	hypothetical protein	NA	NA	NA	NA
AUW07583.1\|58346_59681_-	replicative DNA helicase	O80281	Escherichia_phage	1.3e-141	59.8
AUW07584.1\|59695_60025_-	PemK family transcriptional regulator	Q708N9	Streptococcus_phage	6.9e-09	47.7
AUW07585.1\|60024_60282_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
AUW07586.1\|60551_61178_+	hypothetical protein	NA	NA	NA	NA
AUW07587.1\|61174_61489_+	hypothetical protein	NA	NA	NA	NA
AUW07588.1\|61485_62664_+	hypothetical protein	A0A222YXT1	Escherichia_phage	8.8e-38	34.5
AUW07589.1\|62663_63404_+	hypothetical protein	NA	NA	NA	NA
AUW07590.1\|63400_64324_+	chemotaxis protein	NA	NA	NA	NA
AUW07591.1\|64326_64524_+	hypothetical protein	NA	NA	NA	NA
AUW07592.1\|64553_65234_+	hypothetical protein	NA	NA	NA	NA
AUW07606.1\|65250_65436_+	hypothetical protein	M4QRN4	Micromonas_pusilla_virus	8.7e-09	46.7
AUW07593.1\|65508_66240_+	hypothetical protein	NA	NA	NA	NA
AUW07594.1\|66236_67235_+	hypothetical protein	A0A222YXZ0	Escherichia_phage	1.3e-26	27.1
AUW07595.1\|68029_68239_+	hypothetical protein	NA	NA	NA	NA
AUW07596.1\|68492_70094_+	hypothetical protein	A0A222YWC7	Escherichia_phage	3.6e-66	29.2
AUW07597.1\|70157_70619_+	hypothetical protein	NA	NA	NA	NA
AUW07598.1\|70625_72179_+	hypothetical protein	A0A1B0V7E4	Salmonella_phage	3.4e-61	33.0
AUW07599.1\|72189_72861_+	hypothetical protein	NA	NA	NA	NA
AUW07600.1\|72860_73505_+	hypothetical protein	A0A222YY02	Escherichia_phage	5.5e-26	36.9
AUW07601.1\|73518_74019_+	hypothetical protein	A0A222YWE4	Escherichia_phage	2.6e-15	32.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP026317

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP026317_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026317_1

27529-28091

TypeI-E

Consensus_repeat	Method
AGAAACATCCACGATTACGTGGAAAATAC	CRISPRCasFinder

9 spacers

cas5,cas7,cas6e,cse2gr11,cas8e

The CRISPR arrays of CP026317_1

>merge|CP026317|1|27529-28091|CRISPRCasFinder
GTAAACATCCACGCTAGTGTGGAAAAGACTCATTCAGCAACCAACTTCATTACGTCTGAAGAAACATCCACGCTTGCGTGGAAAATACAGAATACACATCTCTTTTATCATACCACTATTGGAAACATCCACGATTTCCGTGGAAAATAATTTGCTGCGTAACATTGAACTGTCTTGTAGGAAGAAACATCCACGCTTGCGTGGAAAAGACTAATTTTTAATCTGGAATGTCTTTAACCTTGAGAAACATCCACGGTTACGTGGAAAAGACTCTCGGCAATAACAATGTTAGAAACATCCACGATTACGTGGAAAATACAATGCTGAGGTTGGTAAATTGCCATTTCAATCAGAAACATCCACGACTACGTGGAAAATACGTGGTTGTAACGAATCTGAACCTTTTGATTCTGGAAACATCCACGCGAGCGTGGGAAATACCATGAGTCTACGTGACCGATTTGCATCCACTGAGAAACATCCACGACTACGTGGGAAATACCTCTGTCCGTTGAGCATCCACTGCAGTCTTCCAGAAACATCCACGATTACGTGGGAAATAC

>CP026317|1|1|27529-28091|CRISPRCasFinder
GTAAACATCCACGCTAGTGTGGAAAAGAC	TCATTCAGCAACCAACTTCATTACGTCTGA
AGAAACATCCACGCTTGCGTGGAAAATAC	AGAATACACATCTCTTTTATCATACCACTATT
GGAAACATCCACGATTTCCGTGGAAAATA	ATTTGCTGCGTAACATTGAACTGTCTTGTAGGA
AGAAACATCCACGCTTGCGTGGAAAAGAC	TAATTTTTAATCTGGAATGTCTTTAACCTTG
AGAAACATCCACGGTTACGTGGAAAAGAC	TCTCGGCAATAACAATGTT
AGAAACATCCACGATTACGTGGAAAATAC	AATGCTGAGGTTGGTAAATTGCCATTTCAATC
AGAAACATCCACGACTACGTGGAAAATAC	GTGGTTGTAACGAATCTGAACCTTTTGATTCT
GGAAACATCCACGCGAGCGTGGGAAATAC	CATGAGTCTACGTGACCGATTTGCATCCACTG
AGAAACATCCACGACTACGTGGGAAATAC	CTCTGTCCGTTGAGCATCCACTGCAGTCTTCC
AGAAACATCCACGATTACGTGGGAAATAC

Protein	Signature genes	Signature genes Name	Protein_function
CP026317.1\|AUW07369.1\|26443_26962_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131433
CP026317.1\|AUW07361.1\|17469_18000_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349760
CP026317.1\|AUW07368.1\|23860_25237_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224173
CP026317.1\|AUW07372.1\|28964_29270_+\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07379.1\|34720_35350_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
CP026317.1\|AUW07363.1\|18700_19006_+\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07371.1\|28434_28821_-\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07377.1\|33048_34080_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
CP026317.1\|AUW07370.1\|27051_27498_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214947
CP026317.1\|AUW07376.1\|32350_33052_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|273842
CP026317.1\|AUW07367.1\|22847_23864_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224173
CP026317.1\|AUW07365.1\|20535_20889_+\|IS66-family-insertion-sequence-hypothetical-protein	unknown	unknown	gnl\|CDD\|377551
CP026317.1\|AUW07362.1\|18050_18575_-\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07364.1\|19024_20269_+\|IS91-family-transposase	unknown	unknown	gnl\|CDD\|377437
CP026317.1\|AUW07373.1\|29288_30533_+\|IS91-family-transposase	unknown	unknown	gnl\|CDD\|377437
CP026317.1\|AUW07375.1\|31327_31585_-\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07380.1\|35231_36767_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	gnl\|CDD\|187860
CP026317.1\|AUW07366.1\|20948_22478_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
CP026317.1\|AUW07378.1\|34091_34721_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|187858
CP026317.1\|AUW07374.1\|30944_31331_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP026317.1\|AUW07369.1\|26443_26962_+\|hypothetical-protein	gnl\|CDD\|131433	TIGR02380, ECA_wecA, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. Members of this family are the WecA enzyme of enterobacterial common antigen biosynthesis, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. This family represents one narrow clade, and closely related sequences outside this clade may represent enzymes that catalyze the same specific reaction, but in the context of different pathways. A His-rich motif in a cytosolic loop of this integral membrane protein, shown critical to enzymatic activity for WecA is variously present or absent in the clade that includes Bacillus subtilis TagO teichoic acid biosynthesis enzyme, which may catalyze the same reaction as WecA. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	5.36661e-05
CP026317.1\|AUW07361.1\|17469_18000_-\|hypothetical-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	1.83027e-06
CP026317.1\|AUW07368.1\|23860_25237_-\|hypothetical-protein	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	9.69758e-100
CP026317.1\|AUW07379.1\|34720_35350_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.32108e-15
CP026317.1\|AUW07376.1\|32350_33052_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	1.04668e-51
CP026317.1\|AUW07367.1\|22847_23864_-\|hypothetical-protein	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	2.4007e-62
CP026317.1\|AUW07370.1\|27051_27498_+\|hypothetical-protein	gnl\|CDD\|214947	smart00974, T5orf172, This entry represents the putative helicase A859L.	0.00047661
CP026317.1\|AUW07377.1\|33048_34080_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	3.45604e-108
CP026317.1\|AUW07365.1\|20535_20889_+\|IS66-family-insertion-sequence-hypothetical-protein	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	3.27798e-38
CP026317.1\|AUW07364.1\|19024_20269_+\|IS91-family-transposase	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	1.28051e-62
CP026317.1\|AUW07373.1\|29288_30533_+\|IS91-family-transposase	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	1.28051e-62
CP026317.1\|AUW07380.1\|35231_36767_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	5.60145e-49
CP026317.1\|AUW07366.1\|20948_22478_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	1.07949e-123
CP026317.1\|AUW07378.1\|34091_34721_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	8.25609e-44

>CP026317.1|AUW07370.1|27051_27498_+|hypothetical-protein
MENFMFLSFCGVWFYLAQNMYKESIISFGVLVFCMILLVKSRRKKFKKPEGKIYVIYPKSNKWICKVGLTKRDAHRRVAELNDQCYFGKSDWNVYKTYEVSDIKQAEDDCHSILLRHQLIGKKNEKEVFSLHPFIAVMKIRNTLKIYR
>CP026317.1|AUW07369.1|26443_26962_+|hypothetical-protein
MIVLVTPIMVAFLGVSFISMIDGHELLFYVSLASFFVCLMVTTLNLKFIPKLIVMSLLIFSLILLIIFSIKSGVMKPSTIYWLVPIPLFDFSCTLLKRFLDNTDKDNIIVSLKKFGFSDHVSGVILGVMSLVYMSVGVIGDSVDADPTLMGLALCIAFMVHWCVVDDLRLKD
>CP026317.1|AUW07368.1|23860_25237_-|hypothetical-protein
MIEPLLTFLFGILLILAIIAANGYFVAQEFAYMAVDRTRLVTFAASGDAAAKRALSVTNRTSFMLSGAQLGITVTGLVLGFVAEPLVGRSIGVLLQNFGIELEIGIAIGTVATLVIAMVVQMILGELYPKNLAIANAEPMSRMLSRSTLIYMSVFGWFISFFDKSANLLLRAVRIEPVHDLDVSASEGDLHHIIANSRNSGDLPVELSFMMDRILDFPERDVEHAMVPRSQVDWVVPETTLTELLSLMAQAHTRYPVINDDDAPVGVVHLADVLKKIETGHADATVSSVMRPATVLPTLMRLPDALDQLVTSTNQLACVIDEYGGFAGVLTIEDLAMEIVGEITDEHDMDNSNAVVAESDKVWLMTGDVHLDEVKRAIGYDLPRRDVETIAGMLIAEKGALPTNGEMITVALPIDPSELASGEPLLRHLEVSVLRIERHVPTEVRVKLVEKSILEKKK
>CP026317.1|AUW07367.1|22847_23864_-|hypothetical-protein
MNDPLIVFIITFALIVLSGIFVIIEFALLGARRHRLEEIAVESRSARAALRGMNDLTLMLAGAQLGITFCTFALGAVTKPAVDQWVGPVFISMGMSEWLADGASFGFALFVVTFLHLVVGEMAPKSWSIAHPEKSALAIGIVARAYVWPLRPLLNWINSIANRLVKASGVEPVESAAVGGQDIDTIRHLVEHSGKVGTLQPKIQKQLSGLIDLSSIQIDSLVTEGQVMAHVDKNATVADVRAAAMESGHLRILVFGKSGLKPLVVHVRDTLLEPSERPAREVARNAYVLDSKTPVYEALVRMREASVQLAVVSKDEKMVGIVTLADILKRVLPPTSLN
>CP026317.1|AUW07366.1|20948_22478_+|IS66-family-transposase
MKKTPNINPESQDIAELQAMVKALMASENRLKQERQSLLEQLKLAFERQFAKRSEALKPYDESQGDLFNEVECEATKEEEVEVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCKHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCEQTEDKNRIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALKEHLLQQVVVQADETPLNVLKEDKQCYMWLYCSGADSPDAALPDVKNIALYDYQNSRARACPVAFLGDYSGYLQTDGYGAYDGLHQVTNVGCLAHARRKFMEAKKLQGKGKSGKADKALAKIQKLYGIESRLKGATVETRKAERQLHAKPILDELHEWMTTQKVISSSPLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGLILYDYMVKCMKELAKAEPDVDALLPWNFKH
>CP026317.1|AUW07365.1|20535_20889_+|IS66-family-insertion-sequence-hypothetical-protein
MKRMLSAPEIYLYRESVDFRKSINGLAAIIESDTDLLLGSGALFLFTNKQRDKIKVLYWDKTGFALWYKRLEKAKYKWPTKEKNEVFTLTQFELDRLLSGFTIIGHKPVRINDFTMT
>CP026317.1|AUW07364.1|19024_20269_+|IS91-family-transposase
MVQYSSRRRRHTPNEFVPRATKLLFEKDNAWEKVLWKHAQTFSLWQITCVERMLACGSNMMGAKHYDCGTPNCPHTKVICQSCKTKACSSCGTKSTEQWISTQLDVMPDCEHQHITFTMPSELWPIFEANPKLLNDLFSLAADTLLKWAKKYGLEVGIFGALHTYGRGLNWHPHIHLSVTRGGLDKHNIWRPIYFKKKHVEYHWRRCLIGLLRRKYSELNLSTLSTNHIQDSRQWHFFLERQYQRYWNIHFAQKTQELKQTVNYLGRYLKRPPISASRLRHYSGGTVVFKYLDHRDGKYKTKTLTQEEMILRYVSHLPQHHFKMVRYYGFLSNRKRGRLLPLVYLALGEKSPKQAEPLTYAKQYKGFTGNDPYQCVLCGSRMVFTGFRAGSKNRELLDNRRMSMRESRRLGVPA
>CP026317.1|AUW07363.1|18700_19006_+|hypothetical-protein
MKKVKLGFYDVKFGSVALCHGVSLVVTHDKSTLRELAPVNKGHVYQTVYLHHVLDGLALGAEYDFDTPAFNVLKEHIELNEFSHHALDEAEPTFHRVKLAN
>CP026317.1|AUW07362.1|18050_18575_-|hypothetical-protein
MVMYKHSSAMKFVASLQEEDKKNNQYQYIVASFLIERLIFSRFGRPLHLTMYSVSDHCIHRIMHRLDCIDCNECLDIVTLDVARIMLYMDSVSEPSDFKSLKIRTSTGVYVMCKFDNSLTVGHDKTISESIDYAMVTFDPDLLKEVVVDVDLSFVSESIIKMLHKTHPATLKIT
>CP026317.1|AUW07361.1|17469_18000_-|hypothetical-protein
MKVICLIGSKGGVGKSTLVNYIAWVLRTVYKKKVSVCNLDFQNHVQVVNHDDADFLIFDTVGAYAERTTNLLNKLKNDPNATVICPMGTGINDRKEYRFTVDQMMKYGLLDKTTFVMNKARQGSKSLADSRSLLKEMDVKVSVASVSILEDYAQERYTSRTKNEISRVLNEILGRL
>CP026317.1|AUW07371.1|28434_28821_-|hypothetical-protein
MKSNFAFRNTPPEPTVDVPLGSGKIEIETQKIYQIKVEPTMVSHLGNKAITDEIRWHATNEEMTTNFLMTTGAGTLETYRIAPDSDNLTSVRFYPRIYTSSVNSVSDVLNAYGSVRSEIDLTVTCIPE
>CP026317.1|AUW07372.1|28964_29270_+|hypothetical-protein
MKKVKLGFYDVKFGSVALCHGVSLVVTHDKSTLRELAPVNKGHVYQTVYLHHVLDGLALGAEYDFDTPAFNVLKEHIELNEFSHHALDEAEPTFHRVKLAN
>CP026317.1|AUW07373.1|29288_30533_+|IS91-family-transposase
MVQYSSRRRRHTPNEFVPRATKLLFEKDNAWEKVLWKHAQTFSLWQITCVERMLACGSNMMGAKHYDCGTPNCPHTKVICQSCKTKACSSCGTKSTEQWISTQLDVMPDCEHQHITFTMPSELWPIFEANPKLLNDLFSLAADTLLKWAKKYGLEVGIFGALHTYGRGLNWHPHIHLSVTRGGLDKHNIWRPIYFKKKHVEYHWRRCLIGLLRRKYSELNLSTLSTNHIQDSRQWHFFLERQYQRYWNIHFAQKTQELKQTVNYLGRYLKRPPISASRLRHYSGGTVVFKYLDHRDGKYKTKTLTQEEMILRYVSHLPQHHFKMVRYYGFLSNRKRGRLLPLVYLALGEKSPKQAEPLTYAKQYKGFTGNDPYQCVLCGSRMVFTGFRAGSKNRELLDNRRMSMRESRRLGVPA
>CP026317.1|AUW07374.1|30944_31331_-|hypothetical-protein
MKRLVLISLLLSANAFAGINQSVRSNDLDCFVDVDDPFEMYVEGVNSQYNSDNDDHNNYWNNNYRDDKQVRIGIKYKFGSGIKPIDCDSLFQVELRKKEIELERLRSALENMKALDSLQSLGNELPAL
>CP026317.1|AUW07375.1|31327_31585_-|hypothetical-protein
MCYQFEQDGKELTPLQVCLDGKEQRELDFDVIVEPDVKKEFTFCSLSGFIGDSSRVRSRMCTEVSMLYAKTLIEKRQKQLEELRK
>CP026317.1|AUW07376.1|32350_33052_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSNPYVLMWLESPIQSWGYDSRFGRRDTLLFPTKSGVLGIICNALGREGEQSDFLSEFIELDIQVYAFPRSVDGMIKNLPMLKDFHMVGSGYDDKDPWELLHIPKTSEGKKVVGGGSKMTYRYYLQDMAFAVLLEIPSKRVSEIIESLQFPVYDLCLGRKCCVPTEFVYQGVFDVADEGVSVATKLATSKSRKLHFVVTEGGGEGEQLTISDVPIRFGSYKQYQDRIVTIRYE
>CP026317.1|AUW07377.1|33048_34080_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MKTTRIEFHILQSFPVTCLNRDDIGSPKSAIVGGVPRARVSSQCWKRQVRMSMRDFGIKIGTRTKKIEKLMNGACLSLDAEIKEAQLCADVIAKELSSETLVFISDTECKAFAEYAKSLNFDHTKIKSKELGKISKKVINPAIDALDIALFGRMVAKSSEMDVQAACSFNHAISTHKAVNEIEFFTALDDIRMDGEQGSGHMGSIEFNSATYYRYISLDIGRLAASMNPNDVKTAIEAFTKALFVAVPNARQTTQSGASPWEYAKVLVRKGQGLQVPFEVPVQCENGSYLKPSIDAMNKYLDDKEALFGSIFGKLGCYEWGVDTSYNIDSLINDLKTHVTYNL
>CP026317.1|AUW07378.1|34091_34721_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MQLYASVLKIDRKSFKELRIKDTYSLHRVVYNLFECVDNETSRCIQWVDMGGDFHSRDVLIFSDKIPRSSIDGAGTVVTKEIPLQFLGYDFYRFEIVVNPSYRPMKRGSELNGNRTKIVPIKGRENIEKWFIEKSVKCGFECSAIQVESVVVDKFNAKSSVTIQKVKIVGQLKVTDRDQFIKTVASGIGRAKGFGCGLLQVTPIIESLF
>CP026317.1|AUW07379.1|34720_35350_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MCRRYTTSYVQTIHRDKCKLGQNVDLTHGNTLRDRMTKYERCYSFVDYVKLNCRTNKRFASSLNHADYQSGTESNIWDLLCRFDVDIENDNERIPFILIGAAIARGDNHNIHTLPLGRAIYKSFPNGDEQGSARLRRLISCDTTEEVCNVLRPLLGLLQSKIKISINYAELLCQLIEYSNNPESVRMIWTNDFYRFRPEEESSSQKGEA
>CP026317.1|AUW07380.1|35231_36767_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNHFNLIEESWIPVAGVGLVSLRDVFNDHTLKSLGGTPIEKIALTKLLVAIAQSAYTPEDFCEWSSLGSSGLSSKCLSYLEYNKNRFYLYGDNPFLQFHEVKDIARYSTKGKKEKLLPYGALIPEVATGNTTRLTGYNIERSLTDGQKALILITQLSMCFSGKKADNSIVLTEGYEGKSNDKGKPSTPRSGTGIAHMGLLHSFAHGSSLQETIWLNVFTNQDIQETNMFQLGVGVAPWEQMPKGEDCAVARRLKSTLMGRLVPMCRFMYLEKNGVYITEGIHHLTHKDHMFDPSITVKPTCKTRSELKVVWTDPDRKPWRQLPSMLGFLSGSPDMCYQLKFAFDKAKRANRLISVWSGGAQVSANAGEQYLSGGNDTVETIMSIPYESHNHMGFIKYTNEIKELDAISKRLYGCVLGYASEFNKDGKDIALNATMMFWEACGHNAQLLIDSCFDETSESYEKIYQLRKVFFDNVQTIYDILCANHSSRQMQAWSKCRPNAWKYLERSYDEI

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Crispr_ID: CP026317_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026317_2

107107-107217

Orphan

Consensus_repeat	Method
AAAACAAGATTTTACACGAGACATGGAAAAACTGGGGTTTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026317_2

>merge|CP026317|2|107107-107217|CRISPRCasFinder
AAAACAAGATTTTACACGAGACATGGAAAAACTGGGGTTTGGCTAGGTTCGTTACTATCCTTTGACTGAAAAACAGGATTTTACACGAGACATGGAAAAACTGGGGTTTGG

>CP026317|2|2|107107-107217|CRISPRCasFinder
AAAACAAGATTTTACACGAGACATGGAAAAACTGGGGTTTGG	CTAGGTTCGTTACTATCCTTTGACTGA
AAAACAGGATTTTACACGAGACATGGAAAAACTGGGGTTTGG

Protein	Signature genes	Signature genes Name	Protein_function
CP026317.1\|AUW07443.1\|101200_101497_-\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07457.1\|114731_119501_-\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07455.1\|110949_111165_+\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07441.1\|100440_100746_-\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07442.1\|100820_101030_-\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07444.1\|101483_101894_-\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07440.1\|99177_100422_-\|IS91-family-transposase	unknown	unknown	gnl\|CDD\|377437
CP026317.1\|AUW07453.1\|110125_110389_-\|Txe/YoeB-family-addiction-module-toxin	unknown	unknown	gnl\|CDD\|284238
CP026317.1\|AUW07450.1\|108510_108879_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276807
CP026317.1\|AUW07445.1\|101897_102866_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|212669
CP026317.1\|AUW07512.1\|107510_108491_+\|IS5/IS1182-family-transposase	unknown	unknown	gnl\|CDD\|290455
CP026317.1\|AUW07446.1\|103201_103627_+\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07451.1\|109077_109407_-\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07449.1\|106668_106974_-\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07456.1\|111517_111970_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183569
CP026317.1\|AUW07447.1\|103679_105212_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
CP026317.1\|AUW07448.1\|105405_106650_-\|IS91-family-transposase	unknown	unknown	gnl\|CDD\|377437
CP026317.1\|AUW07513.1\|112351_113332_+\|IS5/IS1182-family-transposase	unknown	unknown	gnl\|CDD\|290455
CP026317.1\|AUW07452.1\|109473_110082_-\|hypothetical-protein	unknown	unknown	unknown
CP026317.1\|AUW07454.1\|110381_110636_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	unknown	unknown	gnl\|CDD\|171099

Protein	Function_ID	Function_description	E-value
CP026317.1\|AUW07512.1\|107510_108491_+\|IS5/IS1182-family-transposase	gnl\|CDD\|290455	pfam13737, DDE_Tnp_1_5, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.75258e-24
CP026317.1\|AUW07513.1\|112351_113332_+\|IS5/IS1182-family-transposase	gnl\|CDD\|290455	pfam13737, DDE_Tnp_1_5, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.75258e-24
CP026317.1\|AUW07456.1\|111517_111970_+\|hypothetical-protein	gnl\|CDD\|183569	PRK12517, PRK12517, RNA polymerase sigma factor; Provisional.	8.10473e-19
CP026317.1\|AUW07447.1\|103679_105212_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	2.18958e-124
CP026317.1\|AUW07453.1\|110125_110389_-\|Txe/YoeB-family-addiction-module-toxin	gnl\|CDD\|284238	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system. YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in pfam02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as an antitoxin-toxin pair. When the plasmid is lost, the antitoxin is degraded relatively quickly by host enzymes. This allows the toxin to interact with its intracellular target, thus killing the cell or impeding cell growth. These toxins are highly potent protein synthesis inhibitors, specifically blocking the initiation of translation. In the case of YoeB, it binds to the 50 S ribosomal subunit in 70 S ribosomes and interacts with the A site leading to mRNA cleavage at this site. As a result, the 3'-end portion of the mRNA is released from ribosomes, and translation initiation is effectively inhibited.	5.21832e-48
CP026317.1\|AUW07448.1\|105405_106650_-\|IS91-family-transposase	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	1.28051e-62
CP026317.1\|AUW07440.1\|99177_100422_-\|IS91-family-transposase	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	1.28051e-62
CP026317.1\|AUW07450.1\|108510_108879_-\|hypothetical-protein	gnl\|CDD\|276807	sd00010, SLR, Sel1-like repeat. Sel1-like repeats (SLRs) share similar alpha-helical conformations with Tetratricopeptide repeats (TPRs), but with different consensus sequence lengths and superhelical topologies. SLRs contain 36 to 44 amino acids and are present in bacteria and eukaryotes but not in archaea. SLR proteins are involved in a variety of functions, and many serve as adaptor proteins for the assembly of macromolecular complexes. The SLR family was named after the Caenorhabditis elegans Sel1 protein which is predicted to fold into 11 SLRs, a transmembrane domain, and an N-terminal signal sequence. The human Sel1L protein contains an additional fibronectin type-II domain and an N-terminal PEST sequence. Its downregulation is associated with the development of breast and pancreatic carcinomas.	7.61585e-20
CP026317.1\|AUW07445.1\|101897_102866_-\|hypothetical-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	2.8487e-34
CP026317.1\|AUW07454.1\|110381_110636_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl\|CDD\|171099	PRK11409, PRK11409, YoeB-YefM toxin-antitoxin system antitoxin YefM.	7.235e-22

>CP026317.1|AUW07449.1|106668_106974_-|hypothetical-protein
MKKVKLGFYDVKFGSVALCHGVSLVVTHDKSTLRELAPVNKGHVYQTVYLHHVLDGLALGAEYDFDTPAFNVLKEHIELNEFSHHALDEAEPTFHRVKLAN
>CP026317.1|AUW07448.1|105405_106650_-|IS91-family-transposase
MVQYSSRRRRHTPNEFVPRATKLLFEKDNAWEKVLWKHAQTFSLWQITCVERMLACGSNMMGAKHYDCGTPNCPHTKVICQSCKTKACSSCGTKSTEQWISTQLDVMPDCEHQHITFTMPSELWPIFEANPKLLNDLFSLAADTLLKWAKKYGLEVGIFGALHTYGRGLNWHPHIHLSVTRGGLDKHNIWRPIYFKKKHVEYHWRRCLIGLLRRKYSELNLSTLSTNHIQDSRQWHFFLERQYQRYWNIHFAQKTQELKQTVNYLGRYLKRPPISASRLRHYSGGTVVFKYLDHRDGKYKTKTLTQEEMILRYVSHLPQHHFKMVRYYGFLSNRKRGRLLPLVYLALGEKSPKQAEPLTYAKQYKGFTGNDPYQCVLCGSRMVFTGFRAGSKNRELLDNRRMSMRESRRLGVPA
>CP026317.1|AUW07447.1|103679_105212_-|IS66-family-transposase
MKKTPVINPESQDVAELQAMVKTLLASESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAAKEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCEQTEDKSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRSTMARWVIQVSEKFKPLYAALKEHLLQQVVVQADETPLNVLKEDKQCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARACPVAFLGDYSGYLQTDGYGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESRLKGATVETRKAERQQHAKPILDELHDWMTSQQVISSSPLGKALKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGLILYDYMVKCMKELAKAEPDIDALLPWNFKH
>CP026317.1|AUW07446.1|103201_103627_+|hypothetical-protein
MSVKCIKNYGFEHQGLSQVIPFFIVDDVIVNYAFVCDDKSFKTPVGKIKKACLMSILNAEYVSVFVPNGSFDDMKKTIRDEFTKTHKGGVAKLAILFEIQSTGAASDSTFYEGLGIVPNEAEYITFEQSGLKSSGHPFRCF
>CP026317.1|AUW07445.1|101897_102866_-|hypothetical-protein
MNHLNVEVIDKASIDDGSSAIKAAFDKGDGVKTHSFESRVIRNALPDNKTVTGFSASSYEINGEKYAVVEDSDGIVPTTTVTYQTSEVNRVLVHHMLKQIGMTGKVSVLVTLPVDQFLNSDGSRNQQLIEAKIANIKGEITYLDGTKPAEIVSVIVVPEGVPAYQYACSELSLGGESNIGRYFVIDIGGTTTDILDIKNGQIVSSGSLPIGALEMIESFKGVIKNRLGFRSVPDSDALEGILTGRTLHNDFSSEAKIEIEKFNKRLSDHVLTDGQYVKYTNVIYSGGGANLVEPEMHNAVKTSNPRFDNALGGLQILQSIGD
>CP026317.1|AUW07444.1|101483_101894_-|hypothetical-protein
MANAKSVQIRLREDFPLEKKIIEYLAKIGGRSGLEKQIFVRAMTEHMAENPLDDDIGYAPKNKTKDEKVFKVKPEESKEVVSVEERREPLQEQSSSEGYSSYFGDTQVNPEKVDTQPTPKITPKLTDVASFMYAKG
>CP026317.1|AUW07443.1|101200_101497_-|hypothetical-protein
MLKVKSKRPHRKDLITMRSFLYPLIPRFIMIQNYIDLFIHFLDNFELYLAFATYKSVIGGLESGRMFFTLLYAAFCFQTGKIIGILIRQPQRNNNNHQ
>CP026317.1|AUW07442.1|100820_101030_-|hypothetical-protein
MYSADKIEFNKVIYDYTVLVESGATPYVHSKLTKQHLTGLLSNNLALESIYIALMFSKIAILRIEQGRY
>CP026317.1|AUW07441.1|100440_100746_-|hypothetical-protein
MKKVKLGFYDVKFGSVALCHGVSLVVTHDKSTLRELAPVNKGHVYQTVYLHHVLDGLALGAEYDFDTPAFNVLKEHIELNEFSHHALDEAEPTFHRVKLAN
>CP026317.1|AUW07440.1|99177_100422_-|IS91-family-transposase
MVQYSSRRRRHTPNEFVPRATKLLFEKDNAWEKVLWKHAQTFSLWQITCVERMLACGSNMMGAKHYDCGTPNCPHTKVICQSCKTKACSSCGTKSTEQWISTQLDVMPDCEHQHITFTMPSELWPIFEANPKLLNDLFSLAADTLLKWAKKYGLEVGIFGALHTYGRGLNWHPHIHLSVTRGGLDKHNIWRPIYFKKKHVEYHWRRCLIGLLRRKYSELNLSTLSTNHIQDSRQWHFFLERQYQRYWNIHFAQKTQELKQTVNYLGRYLKRPPISASRLRHYSGGTVVFKYLDHRDGKYKTKTLTQEEMILRYVSHLPQHHFKMVRYYGFLSNRKRGRLLPLVYLALGEKSPKQAEPLTYAKQYKGFTGNDPYQCVLCGSRMVFTGFRAGSKNRELLDNRRMSMRESRRLGVPA
>CP026317.1|AUW07512.1|107510_108491_+|IS5/IS1182-family-transposase
MPNKYNQRKRRHFSKPKFRTRNWRQYNQSLKDRGSIDIWLSKEILDEWQFDKRHYDGTGSTVKYPDKTIEACHHLRMVFKQPLRQAQGFIGSLLKMLGRKNLQCPDYSVLSRRLGDLGLVTPRFKQLDIIDKDIVAIAIDSTGLKLYGKDEWHQEKHNIDAKRSWKKAHFVVRNNHIIESAVMTGKDVMDDQVVGDLCQQIIADVKHITADKMYDTNAVYSTLEECFPNADIVIPPKDNSFADEHHNKKRMQNLVSCTALGVMGWQKKRDYGRRNVSETAMQRYKKIIGNRLYSRKSSNQAQEMLIGCSILNRFTQLGMPNSYRVA
>CP026317.1|AUW07450.1|108510_108879_-|hypothetical-protein
MMIPDEIIKKAESGDVESQYNLAWLYDEENNIDEAKKWFEAASNNGHKESQYNLGLLFEELDQLPEAKKWFLEAANQNCSDAQFKLGCLAELEADIESAKNWYKLSAGQGDFDAERLCCNTK
>CP026317.1|AUW07451.1|109077_109407_-|hypothetical-protein
MITKESCLINHIKTNHPTLLSLTSFPLRIINNQNHADYFDAVVWFDDENYLTISMSTLRDEWMNSTFTVVVHGEFCRSAMEGGKHVTCLGLSSLDRRLNRFTDIATKLN
>CP026317.1|AUW07452.1|109473_110082_-|hypothetical-protein
MIKITEYFEDFDSAMFHLKSQLNGVVNRGVDTNGNECFVWTGEVDIYYLASKIRSLLSSRDPITEQDKMRFANIGISTLSKPKVSKSGITYLQCNDIISKNIDEAQYKVKRYNQLGLHGDGWRIPTFREIQELDLVFGTWWCTDEHEEVNVYTLDREYGVAFDVETKAVVAIKFQDSKHINGTSNFEGGGYNYSPRVILVRN
>CP026317.1|AUW07453.1|110125_110389_-|Txe/YoeB-family-addiction-module-toxin
MSSRLLSWTNEAWDDYLYWQSQDKKTLKRVNKLISDAKRSPFEGIGKPEPLRENLSGFWSRRIDDVNRLVYAVNDESLTIISCRYHY
>CP026317.1|AUW07454.1|110381_110636_-|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MRIVSFTEARNNLKTILDTVVDDADTTVITRRDSEDAVVMSLDYYNSLMETVHLLRSPNNAEHLNRSIEQYRSGHTTARDLIDE
>CP026317.1|AUW07455.1|110949_111165_+|hypothetical-protein
MKKDILLTNLILLSTVAVSSTLESSEQRCYKFSDEEKLLFLESSTPPLSNDSNALFPDLQLVYIDPVIFKF
>CP026317.1|AUW07456.1|111517_111970_+|hypothetical-protein
MIRHHNTSNYSNDEYLFHHYVVLKYYKTLYQYAYCLCGSFETAEGLVIRTYAKAVHSISEKESSNYKVLLITILIKENDEFLLKNKNTPIRVNNNETYNKIMTLDNKYRAPLLLQVIAECNHDEISKILDIEHSEVKELIIYARSKLGGF
>CP026317.1|AUW07513.1|112351_113332_+|IS5/IS1182-family-transposase
MPNKYNQRKRRHFSKPKFRTRNWRQYNQSLKDRGSIDIWLSKEILDEWQFDKRHYDGTGSTVKYPDKTIEACHHLRMVFKQPLRQAQGFIGSLLKMLGRKNLQCPDYSVLSRRLGDLGLVTPRFKQLDIIDKDIVAIAIDSTGLKLYGKDEWHQEKHNIDAKRSWKKAHFVVRNNHIIESAVMTGKDVMDDQVVGDLCQQIIADVKHITADKMYDTNAVYSTLEECFPNADIVIPPKDNSFADEHHNKKRMQNLVSCTALGVMGWQKKRDYGRRNVSETAMQRYKKIIGNRLYSRKSSNQAQEMLIGCSILNRFTQLGMPNSYRVA
>CP026317.1|AUW07457.1|114731_119501_-|hypothetical-protein
MKRLLLPLCLSIAGCNDYEEYITENNHAPTIEALSTIKAVAGKTTKVSVTASDKDGDTLTYSLVSNPSWVSIQDNIISIAPSSANAGNHVFKVKVSDGVLTAEVDAALVVNLPMTPVDPDLVNHAPTIEALSTIKAVAGKTTKVSVTASDKDGDTLTYSLVSNPSWVSIQDNIISIAPSSANAGNHVFKVKVSDGVLTAEVDAALVVNLPMTPVDPDLVNHAPTIEALSTIKAVAGKTTKVSVTASDKDGDTLTYSLVSNPSWVSIQDNIISIAPSSANAGNHVFKVKVSDGVLTAEVDAALVVNLPMTPVDPDLVNHAPTIEALSTIKAVAGKTTKVSVTASDKDGDTLTYSLVNNPSWVSIQDNIISIAPSSANAGNHVFKVKVSDGVLTAEVDAALVVNLPMTPVDPDLVNHAPTIEALSTIKAVAGKTTKVSVTASDKDGDTLTYSLVSNPSWVSIQDNIISIAPSSANAGNHVFKVKVSDGVLTAEVDAALVVNLPMTPVDPDLVNHAPTIEALSTIKAVAGKTTKVSVTASDKDGDTLTYSLVNNPSWVSIQDNIISIAPSSANAGNHVFKVKVSDGVLTAEVDAALVVNLPMTPVDPDLVNHAPTIEALSTIKAVAGKTTKVSVTASDKDGDTLTYSLVNNPSWVSIQDNIISIAPSSANAGNHVFKVKVSDGVLTAEVDAALVVNLPMTPVDPDLVNHAPTIEALSTIKAVAGKTTKVSVTASDKDGDTLTYSLVNNPSWVSIQDNIISMTPSPLDEGVAEFLVIVSDGMLSTRRKVIVDVFVETIVLSATKNSENKRNVELAWEAKPRKHEYQIYRNETLIDKVSSESYDDVMPLSTTSYSYKIKACDADNHCEIESNVKQLRAEPDKIFVKVQGLDTTVESNKAVLQFYYRSTSKLWVSANFSFNKNETRHIIDLGFDTRYMKRMSLQPINGQICSTDKLNVAQFSNGNDVHAVYSCQTAATLVAEMTTVTIQKGSINQVGSPLILSRQSDGANMTSNDYIYESSNPSVVNVNKQGLLSGVSVGESTITVTANPDNYGEQASTSYKVIVDESTHYIMNKMDFGQQLLLPQNNEHQVITAGVEFLVRGFPVALDISNTKKPNLTFIAEVDGIIREYQVFCPEQLPLSISDDTNYTLSDSCYAYIQPDAVSKGGSYYFKDLDSDAKFFISPSINKPSHLKLVIVPLVVNEVAPIIPDLELIKARILETMPIKSVDISIRAPYVYSEPMATHDLGAFLSTVNNIRQREDNSGTHYMGILTGVCGVNGLAYIGSWHSAVIKDERCGGVNAINVSLIHELGHNLSLKHAPCGGASGADSFWTKDPQPWVGARNGAMSDAPIFSLKAQEILIPGSLTTKADIMGYCGGWHFSEYNHRKMALYIENNDVYNIKPDIGMVRSNSKNLVTIVSGKIVNGVVYFDPTSVSTSTRPQEIYQGEYELIVSSDYRYKFDVVKDSNEDILHFNVEIPYTETISSLAIEKNSISYGTKVNVYQRHQMLVNAEVNVSAGHLFVKWDNTDYPWLTAMISNESGSNMLLEEKNTRGYLDAEIPKYFDDNVVTLIFSNGLDTNIQQYCRKDLKYEECN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP026317_1	1.1\|27558\|30\|CP026317\|CRISPRCasFinder	27558-27587	30	NZ_CP026317	Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence	27558-27587	0	1.0
CP026317_1	1.2\|27617\|32\|CP026317\|CRISPRCasFinder	27617-27648	32	NZ_CP026317	Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence	27617-27648	0	1.0
CP026317_1	1.3\|27678\|33\|CP026317\|CRISPRCasFinder	27678-27710	33	NZ_CP026317	Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence	27678-27710	0	1.0
CP026317_1	1.4\|27740\|31\|CP026317\|CRISPRCasFinder	27740-27770	31	NZ_CP026317	Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence	27740-27770	0	1.0
CP026317_1	1.5\|27800\|19\|CP026317\|CRISPRCasFinder	27800-27818	19	NZ_CP026317	Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence	27800-27818	0	1.0
CP026317_1	1.6\|27848\|32\|CP026317\|CRISPRCasFinder	27848-27879	32	NZ_CP026317	Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence	27848-27879	0	1.0
CP026317_1	1.7\|27909\|32\|CP026317\|CRISPRCasFinder	27909-27940	32	NZ_CP026317	Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence	27909-27940	0	1.0
CP026317_1	1.8\|27970\|32\|CP026317\|CRISPRCasFinder	27970-28001	32	NZ_CP026317	Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence	27970-28001	0	1.0
CP026317_1	1.9\|28031\|32\|CP026317\|CRISPRCasFinder	28031-28062	32	NZ_CP026317	Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence	28031-28062	0	1.0
CP026317_2	2.1\|107149\|27\|CP026317\|CRISPRCasFinder	107149-107175	27	NZ_CP026317	Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence	107149-107175	0	1.0
CP026317_1	1.4\|27740\|31\|CP026317\|CRISPRCasFinder	27740-27770	31	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	289611-289641	6	0.806
CP026317_1	1.7\|27909\|32\|CP026317\|CRISPRCasFinder	27909-27940	32	NZ_CP016481	Synechococcus sp. PCC 7117 plasmid unnamed4, complete sequence	37105-37136	8	0.75
CP026317_1	1.2\|27617\|32\|CP026317\|CRISPRCasFinder	27617-27648	32	NZ_CP040241	Campylobacter coli strain S9 plasmid pCcS9_2, complete sequence	1220-1251	9	0.719
CP026317_1	1.8\|27970\|32\|CP026317\|CRISPRCasFinder	27970-28001	32	NZ_CP017589	Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ08, complete sequence	3257-3288	9	0.719

1. spacer 1.1|27558|30|CP026317|CRISPRCasFinder matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 0, identity: 1.0

tcattcagcaaccaacttcattacgtctga	CRISPR spacer
tcattcagcaaccaacttcattacgtctga	Protospacer
******************************

2. spacer 1.2|27617|32|CP026317|CRISPRCasFinder matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 0, identity: 1.0

agaatacacatctcttttatcataccactatt	CRISPR spacer
agaatacacatctcttttatcataccactatt	Protospacer
********************************

3. spacer 1.3|27678|33|CP026317|CRISPRCasFinder matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 0, identity: 1.0

atttgctgcgtaacattgaactgtcttgtagga	CRISPR spacer
atttgctgcgtaacattgaactgtcttgtagga	Protospacer
*********************************

4. spacer 1.4|27740|31|CP026317|CRISPRCasFinder matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 0, identity: 1.0

taatttttaatctggaatgtctttaaccttg	CRISPR spacer
taatttttaatctggaatgtctttaaccttg	Protospacer
*******************************

5. spacer 1.5|27800|19|CP026317|CRISPRCasFinder matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 0, identity: 1.0

tctcggcaataacaatgtt	CRISPR spacer
tctcggcaataacaatgtt	Protospacer
*******************

6. spacer 1.6|27848|32|CP026317|CRISPRCasFinder matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 0, identity: 1.0

aatgctgaggttggtaaattgccatttcaatc	CRISPR spacer
aatgctgaggttggtaaattgccatttcaatc	Protospacer
********************************

7. spacer 1.7|27909|32|CP026317|CRISPRCasFinder matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 0, identity: 1.0

gtggttgtaacgaatctgaaccttttgattct	CRISPR spacer
gtggttgtaacgaatctgaaccttttgattct	Protospacer
********************************

8. spacer 1.8|27970|32|CP026317|CRISPRCasFinder matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 0, identity: 1.0

catgagtctacgtgaccgatttgcatccactg	CRISPR spacer
catgagtctacgtgaccgatttgcatccactg	Protospacer
********************************

9. spacer 1.9|28031|32|CP026317|CRISPRCasFinder matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 0, identity: 1.0

ctctgtccgttgagcatccactgcagtcttcc	CRISPR spacer
ctctgtccgttgagcatccactgcagtcttcc	Protospacer
********************************

10. spacer 2.1|107149|27|CP026317|CRISPRCasFinder matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaggttcgttactatcctttgactga	CRISPR spacer
ctaggttcgttactatcctttgactga	Protospacer
***************************

11. spacer 1.4|27740|31|CP026317|CRISPRCasFinder matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 6, identity: 0.806

taatttttaatctggaatgtctt-taaccttg	CRISPR spacer
taattttgaatcgggaatgtcttattatttt-	Protospacer
******* **** ********** * *..**

12. spacer 1.7|27909|32|CP026317|CRISPRCasFinder matches to NZ_CP016481 (Synechococcus sp. PCC 7117 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gtggttgtaacgaatctgaaccttttgattct	CRISPR spacer
atattattaacgaatctgaagctttagattcg	Protospacer
.*. *  ************* **** *****

13. spacer 1.2|27617|32|CP026317|CRISPRCasFinder matches to NZ_CP040241 (Campylobacter coli strain S9 plasmid pCcS9_2, complete sequence) position: , mismatch: 9, identity: 0.719

agaatacacatctcttttatcataccactatt	CRISPR spacer
gaattcagtatcttttttatcataccacaatt	Protospacer
..* *  ..****.************** ***

14. spacer 1.8|27970|32|CP026317|CRISPRCasFinder matches to NZ_CP017589 (Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ08, complete sequence) position: , mismatch: 9, identity: 0.719

catgagtctacgtgaccgatttgcatccactg	CRISPR spacer
ttaaagtctacgtgacggatttgtatccagaa	Protospacer
.  .************ ******.*****  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

15073 : 63279

Leptospira_phage(75.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW07358.1\|15073_15869_+\|transposase	IS5/IS1182 family transposase	A0A0M5M147	Mycobacterium_phage	5.4e-31	36.9
AUW07359.1\|15806_16403_-	hypothetical protein	NA	NA	NA	NA
AUW07360.1\|17098_17470_-	hypothetical protein	NA	NA	NA	NA
AUW07361.1\|17469_18000_-	hypothetical protein	NA	NA	NA	NA
AUW07362.1\|18050_18575_-	hypothetical protein	NA	NA	NA	NA
AUW07363.1\|18700_19006_+	hypothetical protein	NA	NA	NA	NA
AUW07364.1\|19024_20269_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07365.1\|20535_20889_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW07366.1\|20948_22478_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	3.0e-70	34.2
AUW07367.1\|22847_23864_-	hypothetical protein	NA	NA	NA	NA
AUW07368.1\|23860_25237_-	hypothetical protein	NA	NA	NA	NA
AUW07369.1\|26443_26962_+	hypothetical protein	NA	NA	NA	NA
AUW07370.1\|27051_27498_+	hypothetical protein	NA	NA	NA	NA
AUW07371.1\|28434_28821_-	hypothetical protein	NA	NA	NA	NA
AUW07372.1\|28964_29270_+	hypothetical protein	NA	NA	NA	NA
AUW07373.1\|29288_30533_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07374.1\|30944_31331_-	hypothetical protein	NA	NA	NA	NA
AUW07375.1\|31327_31585_-	hypothetical protein	NA	NA	NA	NA
AUW07376.1\|32350_33052_-	type I-E CRISPR-associated protein Cas5/CasD	NA	NA	NA	NA
AUW07377.1\|33048_34080_-	type I-E CRISPR-associated protein Cas7/Cse4/CasC	NA	NA	NA	NA
AUW07378.1\|34091_34721_-	type I-E CRISPR-associated protein Cas6/Cse3/CasE	NA	NA	NA	NA
AUW07379.1\|34720_35350_-	type I-E CRISPR-associated protein Cse2/CasB	NA	NA	NA	NA
AUW07380.1\|35231_36767_-	type I-E CRISPR-associated protein Cse1/CasA	NA	NA	NA	NA
AUW07511.1\|37161_37527_-	hypothetical protein	NA	NA	NA	NA
AUW07381.1\|37790_38297_-	hypothetical protein	NA	NA	NA	NA
AUW07382.1\|38415_39945_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	3.0e-70	34.2
AUW07383.1\|40004_40358_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW07384.1\|40354_40672_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW07385.1\|41384_44333_-	hypothetical protein	NA	NA	NA	NA
AUW07386.1\|44854_46099_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07387.1\|48857_49169_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW07388.1\|49165_49519_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW07389.1\|49881_50187_+	hypothetical protein	NA	NA	NA	NA
AUW07390.1\|50205_51450_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07391.1\|51687_52947_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07392.1\|53385_54114_-	hypothetical protein	NA	NA	NA	NA
AUW07393.1\|54091_54385_-	hypothetical protein	NA	NA	NA	NA
AUW07394.1\|54446_58325_-	hypothetical protein	NA	NA	NA	NA
AUW07395.1\|59270_59576_+	hypothetical protein	NA	NA	NA	NA
AUW07396.1\|59594_60839_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07397.1\|61022_61340_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW07398.1\|61336_61690_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW07399.1\|61749_63279_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	3.0e-70	34.2

DBSCAN-SWA_2

70633 : 129755

Mycobacterium_phage(53.85%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW07410.1\|70633_71430_-\|transposase	IS5/IS1182 family transposase	A0A0M5M147	Mycobacterium_phage	5.4e-31	36.9
AUW07411.1\|71493_72228_+	hypothetical protein	NA	NA	NA	NA
AUW07412.1\|72261_72780_-	hypothetical protein	NA	NA	NA	NA
AUW07413.1\|73261_73513_-	hypothetical protein	NA	NA	NA	NA
AUW07414.1\|73869_74665_+\|transposase	IS5/IS1182 family transposase	A0A0M5M147	Mycobacterium_phage	5.4e-31	36.9
AUW07415.1\|74741_75668_-	hypothetical protein	NA	NA	NA	NA
AUW07416.1\|75771_76567_+\|transposase	IS5/IS1182 family transposase	A0A0M5M147	Mycobacterium_phage	5.4e-31	36.9
AUW07417.1\|76897_77212_-	hypothetical protein	Q858Q3	Vibrio_phage	3.3e-16	48.2
AUW07418.1\|77453_77759_+	hypothetical protein	NA	NA	NA	NA
AUW07419.1\|77777_79022_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07420.1\|79765_79987_-	hypothetical protein	NA	NA	NA	NA
AUW07421.1\|79968_80721_-	hypothetical protein	NA	NA	NA	NA
AUW07422.1\|80766_81213_-	hypothetical protein	NA	NA	NA	NA
AUW07423.1\|81362_81668_+	hypothetical protein	NA	NA	NA	NA
AUW07424.1\|81686_82931_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07425.1\|83079_83970_-	hypothetical protein	NA	NA	NA	NA
AUW07426.1\|84121_86167_-	hypothetical protein	NA	NA	NA	NA
AUW07427.1\|86903_88148_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07428.1\|88166_88472_-	hypothetical protein	NA	NA	NA	NA
AUW07429.1\|88742_89987_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07430.1\|90005_90311_-	hypothetical protein	NA	NA	NA	NA
AUW07431.1\|90708_91068_+	hypothetical protein	NA	NA	NA	NA
AUW07432.1\|91276_91711_+	hypothetical protein	NA	NA	NA	NA
AUW07433.1\|92351_92951_-	hypothetical protein	NA	NA	NA	NA
AUW07434.1\|93487_94732_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07435.1\|94750_95056_-	hypothetical protein	NA	NA	NA	NA
AUW07436.1\|95326_96571_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07437.1\|96589_96895_-	hypothetical protein	NA	NA	NA	NA
AUW07438.1\|97186_97366_+	hypothetical protein	NA	NA	NA	NA
AUW07439.1\|97837_98764_-	hypothetical protein	NA	NA	NA	NA
AUW07440.1\|99177_100422_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07441.1\|100440_100746_-	hypothetical protein	NA	NA	NA	NA
AUW07442.1\|100820_101030_-	hypothetical protein	NA	NA	NA	NA
AUW07443.1\|101200_101497_-	hypothetical protein	NA	NA	NA	NA
AUW07444.1\|101483_101894_-	hypothetical protein	NA	NA	NA	NA
AUW07445.1\|101897_102866_-	hypothetical protein	NA	NA	NA	NA
AUW07446.1\|103201_103627_+	hypothetical protein	NA	NA	NA	NA
AUW07447.1\|103679_105212_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	2.3e-70	34.6
AUW07448.1\|105405_106650_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07449.1\|106668_106974_-	hypothetical protein	NA	NA	NA	NA
AUW07512.1\|107510_108491_+\|transposase	IS5/IS1182 family transposase	A0A1V0E8E1	Vibrio_phage	6.0e-40	33.5
AUW07450.1\|108510_108879_-	hypothetical protein	NA	NA	NA	NA
AUW07451.1\|109077_109407_-	hypothetical protein	NA	NA	NA	NA
AUW07452.1\|109473_110082_-	hypothetical protein	NA	NA	NA	NA
AUW07453.1\|110125_110389_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
AUW07454.1\|110381_110636_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
AUW07455.1\|110949_111165_+	hypothetical protein	NA	NA	NA	NA
AUW07456.1\|111517_111970_+	hypothetical protein	NA	NA	NA	NA
AUW07513.1\|112351_113332_+\|transposase	IS5/IS1182 family transposase	A0A1V0E8E1	Vibrio_phage	6.0e-40	33.5
AUW07457.1\|114731_119501_-	hypothetical protein	NA	NA	NA	NA
AUW07458.1\|120326_121123_-\|transposase	IS5/IS1182 family transposase	A0A0M5M147	Mycobacterium_phage	5.4e-31	36.9
AUW07459.1\|122122_123361_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	1.2e-90	46.5
AUW07460.1\|124260_125057_-\|transposase	IS5/IS1182 family transposase	A0A0M5M147	Mycobacterium_phage	5.4e-31	36.9
AUW07461.1\|125162_125959_-\|transposase	IS5/IS1182 family transposase	A0A0M5M147	Mycobacterium_phage	5.4e-31	36.9
AUW07514.1\|126374_127355_-\|transposase	IS5/IS1182 family transposase	A0A1V0E8E1	Vibrio_phage	6.0e-40	33.5
AUW07462.1\|129014_129755_-\|transposase	transposase	K4HZD4	Acidithiobacillus_phage	1.6e-45	42.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. CP026316

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

861558 : 868262

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW06198.1\|861558_861927_-	hypothetical protein	Q9MCC3	Vibrio_phage	3.6e-46	79.3
AUW06199.1\|862122_862524_+	hypothetical protein	NA	NA	NA	NA
AUW06200.1\|862527_862743_+	hypothetical protein	A0A1W6UGD1	Vibrio_phage	7.2e-31	87.3
AUW06201.1\|862726_863872_+	phage replication protein	A0A1W6UG38	Vibrio_phage	9.0e-213	92.1
AUW06202.1\|863875_864229_+	DUF1293 domain-containing protein	Q783U4	Vibrio_phage	3.9e-58	96.5
AUW06203.1\|864237_864468_+	transcriptional regulator	R9TMT7	Vibrio_phage	2.5e-05	38.2
AUW06204.1\|864481_864712_+	hypothetical protein	Q783U2	Vibrio_phage	1.7e-06	50.7
AUW06205.1\|864839_866513_+	hypothetical protein	NA	NA	NA	NA
AUW06206.1\|866514_866859_+	hypothetical protein	NA	NA	NA	NA
AUW06207.1\|866861_868262_+	zonular occludens toxin	Q783T9	Vibrio_phage	5.7e-84	40.4

DBSCAN-SWA_2

956785 : 1010538

Sulfolobus_monocaudavirus(16.67%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW06287.1\|956785_957581_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW06288.1\|959746_960542_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW06289.1\|960634_962341_-	D-lactate dehydrogenase	NA	NA	NA	NA
AUW06290.1\|962789_963692_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUW06291.1\|963858_967146_-	1,4-beta-D-glucan glucohydrolase	NA	NA	NA	NA
AUW06292.1\|967354_967549_+	hypothetical protein	NA	NA	NA	NA
AUW06293.1\|968018_969473_-	ATPase RavA stimulator ViaA	NA	NA	NA	NA
AUW06294.1\|969482_971144_-	DUF3763 domain-containing protein	A0A0N9PBE1	Sulfolobus_monocaudavirus	1.9e-17	22.3
AUW06295.1\|971415_971931_+	ADP-ribose pyrophosphatase	NA	NA	NA	NA
AUW06296.1\|971955_972960_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
AUW06297.1\|973041_973368_+	cytochrome C554	NA	NA	NA	NA
AUW06298.1\|973586_975119_+	basic amino acid antiporter	NA	NA	NA	NA
AUW06299.1\|975264_976260_+	deacylase	NA	NA	NA	NA
AUW06300.1\|976373_977495_-	MFS transporter	NA	NA	NA	NA
AUW07312.1\|977631_978411_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUW06301.1\|978428_978950_-	lipocalin	A0A1W6JNX6	Morganella_phage	7.1e-40	46.2
AUW06302.1\|979006_979534_-	histidine phosphatase family protein	NA	NA	NA	NA
AUW06303.1\|979976_980630_-	amino-acid racemase	NA	NA	NA	NA
AUW06304.1\|980700_980946_-	hypothetical protein	NA	NA	NA	NA
AUW06305.1\|981063_981606_-	adenylate kinase	NA	NA	NA	NA
AUW06306.1\|982060_983743_-	chitinase	NA	NA	NA	NA
AUW06307.1\|984116_984497_+	pyruvate dehydrogenase	NA	NA	NA	NA
AUW06308.1\|984583_987640_-	SMC family ATPase	E3SMW4	Prochlorococcus_phage	4.6e-06	22.4
AUW06309.1\|987649_988789_-	exonuclease sbcCD subunit D	G3MA97	Bacillus_virus	8.3e-09	22.0
AUW06310.1\|989153_989480_-	hypothetical protein	NA	NA	NA	NA
AUW06311.1\|993863_994694_-	NAD/NADP transhydrogenase beta subunit	NA	NA	NA	NA
AUW06312.1\|994694_994985_-	type VI secretion protein	NA	NA	NA	NA
AUW06313.1\|994997_996833_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	9.2e-26	26.7
AUW06314.1\|996883_997363_-	Hcp1 family type VI secretion system effector	NA	NA	NA	NA
AUW06315.1\|997570_1000135_-	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	1.2e-87	28.8
AUW06316.1\|1000145_1001108_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AUW06317.1\|1001104_1002928_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AUW06318.1\|1002924_1003389_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AUW06319.1\|1003397_1004195_-	protein of avirulence locus	NA	NA	NA	NA
AUW06320.1\|1004204_1005716_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AUW06321.1\|1005797_1007291_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AUW06322.1\|1007290_1007821_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AUW06323.1\|1007836_1008976_-	type VI secretion system protein TssA	NA	NA	NA	NA
AUW06324.1\|1008968_1009757_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
AUW06325.1\|1009741_1010538_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1219646 : 1259537

Hokovirus(25.0%)

holin,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW06470.1\|1219646_1220442_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW06471.1\|1220526_1221534_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
AUW06472.1\|1221551_1222469_-	ribokinase	NA	NA	NA	NA
AUW06473.1\|1222671_1223550_-	ribose ABC transporter substrate-binding protein RbsB	C6ZCU4	Enterobacteria_phage	7.3e-05	22.7
AUW06474.1\|1223641_1224625_-	ribose ABC transporter permease	NA	NA	NA	NA
AUW06475.1\|1224621_1226127_-	ribose ABC transporter ATP-binding protein RbsA	A0A2H4PQG7	Staphylococcus_phage	2.6e-18	28.2
AUW06476.1\|1226151_1226571_-	D-ribose pyranase	NA	NA	NA	NA
AUW06477.1\|1227111_1229448_+	diguanylate phosphodiesterase	NA	NA	NA	NA
AUW06478.1\|1229541_1230297_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
AUW06479.1\|1230642_1231353_-	aspartate racemase	NA	NA	NA	NA
AUW06480.1\|1231361_1231979_-	NUDIX domain-containing protein	NA	NA	NA	NA
AUW06481.1\|1232167_1232578_-	NUDIX domain-containing protein	NA	NA	NA	NA
AUW06482.1\|1233152_1233794_+	peptidase	NA	NA	NA	NA
AUW07321.1\|1234004_1234412_+	hypothetical protein	NA	NA	NA	NA
AUW06483.1\|1234506_1234824_+	hypothetical protein	NA	NA	NA	NA
AUW06484.1\|1234909_1235587_-	DedA family protein	NA	NA	NA	NA
AUW06485.1\|1235637_1236045_-	hypothetical protein	NA	NA	NA	NA
AUW06486.1\|1236182_1236701_-	DUF4136 domain-containing protein	NA	NA	NA	NA
AUW06487.1\|1236808_1237009_+	hypothetical protein	NA	NA	NA	NA
AUW06488.1\|1237284_1237692_-	hypothetical protein	NA	NA	NA	NA
AUW06489.1\|1237795_1238653_-	sterol desaturase family protein	NA	NA	NA	NA
AUW06490.1\|1238662_1239673_-	DUF2804 domain-containing protein	NA	NA	NA	NA
AUW06491.1\|1239896_1240364_-	peroxiredoxin	NA	NA	NA	NA
AUW06492.1\|1240483_1242847_-	hybrid sensor histidine kinase/response regulator	A0A1V0SGX0	Hokovirus	2.6e-57	35.6
AUW06493.1\|1242839_1243811_-	cytochrome B6	NA	NA	NA	NA
AUW06494.1\|1244067_1247670_+	sensor histidine kinase	A0A1V0SGX0	Hokovirus	3.1e-33	26.2
AUW06495.1\|1247670_1248813_+	diguanylate phosphodiesterase	NA	NA	NA	NA
AUW06496.1\|1248873_1250541_+	hypothetical protein	NA	NA	NA	NA
AUW06497.1\|1250918_1251230_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AUW06498.1\|1251226_1251580_+	IS66 family insertion sequence hypothetical protein	S5VXZ8	Leptospira_phage	9.1e-15	44.6
AUW06499.1\|1251639_1253172_+\|transposase	IS66 family transposase	S5VTP8	Leptospira_phage	1.3e-25	39.5
AUW06500.1\|1253316_1254684_+\|protease	serine protease	NA	NA	NA	NA
AUW06501.1\|1254693_1255485_+	hypothetical protein	J3IZE5	Acanthamoeba_polyphaga_lentillevirus	5.4e-23	28.1
AUW06502.1\|1255704_1256361_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
AUW06503.1\|1256507_1257692_-\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.6e-26	35.8
AUW06504.1\|1257693_1258536_-\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
AUW06505.1\|1258598_1259537_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA

DBSCAN-SWA_4

1947986 : 2008400

Enterobacteria_phage(15.38%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUW07090.1\|1947986_1949231_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AUW07091.1\|1950003_1951458_+	PTS N-acetylmuramic acid transporter subunits IIBC	NA	NA	NA	NA
AUW07092.1\|1951610_1952669_+	porin	NA	NA	NA	NA
AUW07093.1\|1952893_1953142_+	hypothetical protein	NA	NA	NA	NA
AUW07094.1\|1953138_1954041_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUW07095.1\|1954133_1954787_+	hexapeptide transferase	A0A1V0SJ47	Klosneuvirus	4.7e-17	36.7
AUW07096.1\|1954852_1956532_-	DUF342 domain-containing protein	NA	NA	NA	NA
AUW07097.1\|1956979_1958998_-	DEAD/DEAH box helicase	NA	NA	NA	NA
AUW07098.1\|1959113_1960088_-	chromosome partitioning protein ParB	Q38420	Escherichia_phage	4.0e-12	32.2
AUW07099.1\|1960095_1961313_-	ParA family protein	Q1MVJ3	Enterobacteria_phage	2.9e-36	29.2
AUW07100.1\|1962352_1962553_+	hypothetical protein	NA	NA	NA	NA
AUW07101.1\|1962554_1964525_+	translation elongation factor	NA	NA	NA	NA
AUW07102.1\|1964849_1965317_-	transcriptional regulator	NA	NA	NA	NA
AUW07103.1\|1965316_1966249_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-15	33.5
AUW07104.1\|1966245_1967100_-	sugar ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.6e-17	30.5
AUW07105.1\|1967461_1967659_+	hypothetical protein	NA	NA	NA	NA
AUW07106.1\|1968491_1969288_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW07107.1\|1969823_1970579_-	amino acid ABC transporter	NA	NA	NA	NA
AUW07108.1\|1970647_1972573_+	hybrid sensor histidine kinase/response regulator	A0A1V0SGX0	Hokovirus	2.5e-58	36.7
AUW07109.1\|1972667_1972877_+	DUF3283 domain-containing protein	NA	NA	NA	NA
AUW07110.1\|1973012_1973729_+	transcriptional regulator	NA	NA	NA	NA
AUW07111.1\|1973811_1974894_-	rod shape-determining protein RodA	NA	NA	NA	NA
AUW07112.1\|1974832_1975048_+	hypothetical protein	NA	NA	NA	NA
AUW07113.1\|1975210_1976221_-	hypothetical protein	NA	NA	NA	NA
AUW07114.1\|1976231_1977281_-	HlyD family secretion protein	NA	NA	NA	NA
AUW07115.1\|1977400_1978321_+	transcriptional regulator	NA	NA	NA	NA
AUW07116.1\|1978405_1979074_+	hypothetical protein	NA	NA	NA	NA
AUW07117.1\|1979082_1979781_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-41	42.2
AUW07118.1\|1979768_1981037_+	ABC transporter permease	NA	NA	NA	NA
AUW07119.1\|1981029_1981815_+	outer membrane lipoprotein-sorting protein	NA	NA	NA	NA
AUW07120.1\|1981860_1983207_+	hypothetical protein	NA	NA	NA	NA
AUW07121.1\|1983207_1984230_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	3.2e-20	30.7
AUW07122.1\|1984246_1985038_+	DNA-binding response regulator	NA	NA	NA	NA
AUW07123.1\|1985106_1985742_+	hypothetical protein	NA	NA	NA	NA
AUW07124.1\|1986141_1986636_-	cyclophilin	NA	NA	NA	NA
AUW07125.1\|1986758_1988420_-	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	6.0e-16	64.5
AUW07346.1\|1988595_1988982_-	DUF393 domain-containing protein	NA	NA	NA	NA
AUW07126.1\|1989844_1991080_+	sodium/glutamate symporter	NA	NA	NA	NA
AUW07127.1\|1991361_1992132_+	SDR family NAD(P)-dependent oxidoreductase	A0A0M4JSW6	Mollivirus	4.4e-06	25.1
AUW07128.1\|1992233_1992779_+	OsmC family peroxiredoxin	NA	NA	NA	NA
AUW07129.1\|1992875_1993403_-	23S rRNA methyltransferase	A0A2D1A6G0	Rhodococcus_phage	6.1e-07	31.8
AUW07130.1\|1993622_1994720_-	oxidoreductase	NA	NA	NA	NA
AUW07131.1\|1994855_1995425_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AUW07132.1\|1995499_1996861_+	tetratricopeptide repeat-containing protein	NA	NA	NA	NA
AUW07133.1\|1996957_1997791_-	hypothetical protein	NA	NA	NA	NA
AUW07134.1\|1997787_1998645_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-12	27.5
AUW07135.1\|1998641_1999013_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUW07136.1\|1999460_2000687_+	sodium/glutamate symporter	NA	NA	NA	NA
AUW07137.1\|2000931_2001687_+	hypothetical protein	NA	NA	NA	NA
AUW07138.1\|2002369_2003166_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW07139.1\|2003196_2003376_-	hypothetical protein	NA	NA	NA	NA
AUW07140.1\|2003376_2003580_-	hypothetical protein	NA	NA	NA	NA
AUW07141.1\|2003917_2004727_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUW07142.1\|2005139_2006183_+\|transposase	IS630 family transposase	NA	NA	NA	NA
AUW07143.1\|2006405_2007201_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AUW07144.1\|2007419_2008400_-\|transposase	IS5/IS1182 family transposase	A0A1V0E8E1	Vibrio_phage	1.3e-39	33.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage