CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP036329	Klebsiella pneumoniae strain BA28434 plasmid pIncFIA	0 crisprs	NA	0
CP036331	Klebsiella pneumoniae strain BA28434 plasmid pColKP3	0 crisprs	NA	0
CP036327	Klebsiella pneumoniae strain BA28434 chromosome, complete genome	1 crisprs	DinG,DEDDh,cas3,csa3,WYL	8
CP036330	Klebsiella pneumoniae strain BA28434 plasmid punnamed_1_VBA28434	0 crisprs	c2c9_V-U4,DEDDh	1
CP036333	Klebsiella pneumoniae strain BA28434 plasmid punnamed_2_VBA28434	0 crisprs	NA	0
CP036332	Klebsiella pneumoniae strain BA28434 plasmid punnamed_3_VBA28434	0 crisprs	NA	0
CP036328	Klebsiella pneumoniae strain BA28434 plasmid pIncFIBpQil, complete sequence	0 crisprs	RT	1
CP036334	Klebsiella pneumoniae strain BA28434 plasmid punnamed_4_VBA28434	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

11254 : 67820

Escherichia_phage(33.33%)

integrase,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBH61017.1\|11254_12523_+\|transposase	ISL3-like element ISKpn25 family transposase	Q6V7R1	Burkholderia_virus	5.2e-60	34.7
QBH61018.1\|12642_13116_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
QBH61019.1\|13280_13475_+	hypothetical protein	NA	NA	NA	NA
QBH61020.1\|14329_15112_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	4.6e-51	90.2
QBH61021.1\|15111_15444_-	hypothetical protein	NA	NA	NA	NA
QBH61131.1\|15450_15807_-	hypothetical protein	NA	NA	NA	NA
QBH61022.1\|15874_16204_-	hypothetical protein	NA	NA	NA	NA
QBH61023.1\|16231_16540_-	hypothetical protein	NA	NA	NA	NA
QBH61132.1\|16585_16792_-	hypothetical protein	NA	NA	NA	NA
QBH61024.1\|17437_18007_+	hypothetical protein	NA	NA	NA	NA
QBH61025.1\|18147_19176_+	hypothetical protein	NA	NA	NA	NA
QBH61026.1\|19320_22125_-	hypothetical protein	NA	NA	NA	NA
QBH61027.1\|22709_24302_-\|transposase	IS66-like element ISKox1 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.6e-175	61.4
QBH61028.1\|24331_24682_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	5.2e-39	63.8
QBH61029.1\|24678_25119_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.6e-19	60.3
QBH61030.1\|25799_26582_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	6.1e-136	96.5
QBH61031.1\|26578_27601_-\|transposase	IS21-like element ISSen3 family transposase	A0A2L1IVA1	Escherichia_phage	8.7e-175	85.6
QBH61032.1\|28630_30358_-	hypothetical protein	NA	NA	NA	NA
QBH61033.1\|30803_31052_+	hypothetical protein	NA	NA	NA	NA
QBH61034.1\|31048_31621_+	hypothetical protein	NA	NA	NA	NA
QBH61035.1\|31651_32146_+	DNA-binding protein	NA	NA	NA	NA
QBH61036.1\|32189_32489_+	hypothetical protein	NA	NA	NA	NA
QBH61133.1\|32378_32687_-	hypothetical protein	NA	NA	NA	NA
QBH61037.1\|32812_33049_+	hypothetical protein	NA	NA	NA	NA
QBH61038.1\|33180_33729_+	thioredoxin-like domain protein	NA	NA	NA	NA
QBH61039.1\|33775_34210_+	cell envelope integrity protein TolA	NA	NA	NA	NA
QBH61040.1\|34438_35970_-\|transposase	IS3-like element ISKpn38 family transposase	A0A1B1P773	Bacillus_phage	9.0e-51	39.8
QBH61041.1\|36282_36606_-	hypothetical protein	NA	NA	NA	NA
QBH61042.1\|36678_37674_-	hypothetical protein	A0A2H4UVR4	Bodo_saltans_virus	2.1e-32	34.9
QBH61043.1\|37970_38621_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.8e-77	60.6
QBH61044.1\|38667_39009_-	recombinase family protein	A0A219Y912	Aeromonas_phage	3.4e-19	50.0
QBH61045.1\|39121_39826_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QBH61046.1\|39945_40605_-	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0
QBH61047.1\|40658_40850_+	hypothetical protein	NA	NA	NA	NA
QBH61048.1\|41515_42172_-	hypothetical protein	A0A2L1IV26	Escherichia_phage	1.7e-06	100.0
QBH61049.1\|42407_42737_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	2.4e-09	44.2
QBH61050.1\|42717_42999_+	XRE family transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.3e-08	38.0
QBH61051.1\|46681_47242_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	1.1e-59	100.0
QBH61052.1\|47417_47585_-	DUF3330 domain-containing protein	NA	NA	NA	NA
QBH61134.1\|47612_48023_-	EAL domain-containing protein	NA	NA	NA	NA
QBH61053.1\|50024_50813_+	AadA family aminoglycoside 3''-O-nucleotidyltransferase	NA	NA	NA	NA
QBH61135.1\|50888_52142_-	group II intron reverse transcriptase/maturase	H7BVN7	unidentified_phage	3.0e-12	29.7
QBH61136.1\|52974_53298_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA
QBH61054.1\|53291_54131_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	6.5e-11	27.2
QBH61055.1\|54060_54240_-	hypothetical protein	NA	NA	NA	NA
QBH61056.1\|56151_56334_-	resolvase	NA	NA	NA	NA
QBH61057.1\|56362_57127_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	1.3e-85	65.7
QBH61058.1\|57317_57674_-	hypothetical protein	NA	NA	NA	NA
QBH61059.1\|57619_58204_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
QBH61060.1\|59438_60344_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
QBH61061.1\|62092_62425_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
QBH61062.1\|64826_67820_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	1.3e-258	46.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP036327

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CRISPR-Cas detection and classification

Crispr_ID: CP036327_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP036327_1

5160087-5160223

Orphan

Consensus_repeat	Method
CTGCTTCAGTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP036327_1

>merge|CP036327|1|5160087-5160223|CRISPRCasFinder
CTGCTTCAGTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCATAAAGCGGCTCCGTGCCCGGCGGCGCTGCGCTTGCCGGGTCAACTGCTTCGGTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCA

>CP036327|1|1|5160087-5160223|CRISPRCasFinder
CTGCTTCAGTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCA	TAAAGCGGCTCCGTGCCCGGCGGCGCTGCGCTTGCCGGGTCAA
CTGCTTCGGTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
CP036327.1\|QBH60496.1\|5153995_5155339_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-A	unknown	unknown	gnl\|CDD\|235426
CP036327.1\|QBH60503.1\|5160278_5161139_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176522
CP036327.1\|QBH60511.1\|5168018_5168816_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187602
CP036327.1\|QBH60500.1\|5158005_5158602_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-E	unknown	unknown	gnl\|CDD\|235074
CP036327.1\|QBH60497.1\|5155342_5156581_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-B	unknown	unknown	gnl\|CDD\|235425
CP036327.1\|QBH60495.1\|5153829_5154039_-\|hypothetical-protein	unknown	unknown	unknown
CP036327.1\|QBH60494.1\|5152843_5153584_-\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577
CP036327.1\|QBH60498.1\|5156573_5157368_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-C	unknown	unknown	gnl\|CDD\|235423
CP036327.1\|QBH60493.1\|5152105_5152873_+\|class-II-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|372525
CP036327.1\|QBH60501.1\|5158614_5159838_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-F	unknown	unknown	gnl\|CDD\|235481
CP036327.1\|QBH60505.1\|5162356_5162809_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|182099
CP036327.1\|QBH60499.1\|5157360_5157999_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-D	unknown	unknown	gnl\|CDD\|236457
CP036327.1\|QBH60510.1\|5167569_5167986_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863
CP036327.1\|QBH60504.1\|5161298_5162354_+\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
CP036327.1\|QBH60507.1\|5164566_5165025_+\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236395
CP036327.1\|QBH60502.1\|5159840_5160056_+\|(Na+)-NQR-maturation-NqrM	unknown	unknown	gnl\|CDD\|225538
CP036327.1\|QBH60508.1\|5165130_5166375_+\|esterase-FrsA	unknown	unknown	gnl\|CDD\|235337
CP036327.1\|QBH60509.1\|5166432_5166831_+\|sigma-factor-binding-protein-Crl	unknown	unknown	gnl\|CDD\|182882
CP036327.1\|QBH60999.1\|5167199_5167412_-\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|369322
CP036327.1\|QBH60506.1\|5162851_5164309_-\|cytosol-nonspecific-dipeptidase	unknown	unknown	gnl\|CDD\|184986

Protein	Function_ID	Function_description	E-value
CP036327.1\|QBH60496.1\|5153995_5155339_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-A	gnl\|CDD\|235426	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional.	0
CP036327.1\|QBH60503.1\|5160278_5161139_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176522	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.	9.96458e-128
CP036327.1\|QBH60511.1\|5168018_5168816_-\|SDR-family-oxidoreductase	gnl\|CDD\|187602	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR. This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.29477e-50
CP036327.1\|QBH60500.1\|5158005_5158602_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-E	gnl\|CDD\|235074	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional.	4.25239e-127
CP036327.1\|QBH60497.1\|5155342_5156581_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-B	gnl\|CDD\|235425	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional.	0
CP036327.1\|QBH60505.1\|5162356_5162809_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|182099	PRK09831, PRK09831, GNAT family N-acetyltransferase.	2.97281e-85
CP036327.1\|QBH60494.1\|5152843_5153584_-\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.3611e-109
CP036327.1\|QBH60498.1\|5156573_5157368_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-C	gnl\|CDD\|235423	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional.	1.37213e-153
CP036327.1\|QBH60502.1\|5159840_5160056_+\|(Na+)-NQR-maturation-NqrM	gnl\|CDD\|225538	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown].	5.41902e-29
CP036327.1\|QBH60501.1\|5158614_5159838_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-F	gnl\|CDD\|235481	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional.	0
CP036327.1\|QBH60493.1\|5152105_5152873_+\|class-II-glutamine-amidotransferase	gnl\|CDD\|372525	pfam13230, GATase_4, Glutamine amidotransferases class-II. This family captures members that are not found in pfam00310.	1.08772e-144
CP036327.1\|QBH60499.1\|5157360_5157999_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-D	gnl\|CDD\|236457	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated.	1.0782e-142
CP036327.1\|QBH60510.1\|5167569_5167986_-\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	9.9091e-45
CP036327.1\|QBH60506.1\|5162851_5164309_-\|cytosol-nonspecific-dipeptidase	gnl\|CDD\|184986	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional.	0
CP036327.1\|QBH60507.1\|5164566_5165025_+\|xanthine-phosphoribosyltransferase	gnl\|CDD\|236395	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated.	2.19173e-113
CP036327.1\|QBH60504.1\|5161298_5162354_+\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
CP036327.1\|QBH60508.1\|5165130_5166375_+\|esterase-FrsA	gnl\|CDD\|235337	PRK05077, frsA, esterase FrsA.	0
CP036327.1\|QBH60509.1\|5166432_5166831_+\|sigma-factor-binding-protein-Crl	gnl\|CDD\|182882	PRK10984, PRK10984, sigma factor-binding protein Crl.	2.69204e-83
CP036327.1\|QBH60999.1\|5167199_5167412_-\|DUF1471-domain-containing-protein	gnl\|CDD\|369322	pfam07338, DUF1471, Protein of unknown function (DUF1471). This family consists of several hypothetical Enterobacterial proteins of around 90 residues in length. Some members of this family are annotated as ydgH precursors and contain two copies of this region, one at the N-terminus and the other at the C-terminus. The function of this family is unknown.	5.26043e-05

>CP036327.1|QBH60502.1|5159840_5160056_+|(Na+)-NQR-maturation-NqrM
MLTVFIATFVIFALVILGMSLGYLVKRKSIQGSCGGISALGLEKVCDCPEPCDARKKRLAREAQRQQRRIL
>CP036327.1|QBH60501.1|5158614_5159838_+|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-F
MEIILGVVMFTLIVLVLSGLILAARSKLVNAGDVVIEINNEADKQIRTPAGDKLLNTLSSNGIFVSSACGGGGSCGQCRVTVKEGGGDILPTELSHITKRDAKAGCRLACQVAVKQNMKIELPEEIFGVKKWECEVISNDNKATFIKELKLRIPEGEVVPFRAGGYIQIECPPHKVAYADFDVPDEYRSDWDKFNLFRYVSEVKEPTLRAYSMANYPEEKGIIMLNVRIATPPPKVPDAPPGIMSSYIWSLKPGDKVTISGPFGEFFAKETDAEMVFIGGGAGMAPMRSHIFDQLKRLHSTRKISFWYGARSLREMFYDEEFEQLARDNPNFTFHVALSDPLPEDNWTGHTGFIHNVLYENYLRDHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDENILLDDFGG
>CP036327.1|QBH60500.1|5158005_5158602_+|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-E
MAHYISLFVRAVFVENMALAFFLGMCTFLAVSKKVSTAFGLGVAVTVVLGLAVPINNLVYNLVLRDGALVEGVDLSFLNFITFIGVIAALVQILEMILDKYFPALYNALGIFLPLIAVNCAIFGGVSFMVQRDYNFPESIVYGFGSGIGWMLAIVAMAGIREKMKYANVPAGLRGLGITFITTGLMALGFMSFSGVQL
>CP036327.1|QBH60499.1|5157360_5157999_+|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-D
MAEQSDMKEVKRVLVGPLIANNPIALQVLGVCSALAVTTKLETAFVMTIAVTLVTAFSSMFISMIRHHIPNSVRIIVQMAIIASLVIVVDQLLRAFAYETSKQLSVFVGLIITNCIVMGRAEAYAMKSPPLASFMDGIGNGLGYGAILIIVGFLRELIGSGKLFGITVLETVQNGGWYQPNGLFLLAPSAFFIIGLLIWALRSWKPEQQEKE
>CP036327.1|QBH60498.1|5156573_5157368_+|Na(+)-translocating-NADH-quinone-reductase-subunit-C
MAEKKSNDSIGKTLLVVLVLCLVCSIVVAGSAVGLKSRQQAQRALDKQRNILAVSGLMHPGMDADAVADTFAARITPRLVNLATGELLEKDPGKFNQAQALKDPQQSMALDASQDPAGIKRRSNLAEIYLVRDAQQKIEQVVLPIYGNGLWSMMYAFVALDVDGRTVKGITYYDQGETPGLGGEVENPNWRQQFVGKQVLDDNGMPALKVVKGGARAGDLHAVDGLSGATLTSNGVQHSFDFWMGELGFGPFLKKVREGELNNG
>CP036327.1|QBH60497.1|5155342_5156581_+|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-B
MGLKHLIEKLEPHFTHGGKLEKYYPLYEAAATIFYTPGQVTRGAAHVRDAIDLKRMMILVWFAVFPAMFWGMYNVGLQTIPALHKLYGAEQLQQAIANNWHYSVAQWLGVSFSADAGWLSMMTLGAVFFLPIYITVFIVGGFWEVLFAIVRKHEINEGFFVTSILFALIVPPTLPLWQAALGISFGVVIAKEIFGGTGRNFLNPALAGRAFLFFAYPAQISGDLVWTAADGFSGATPLSQWASGGGEALVNVATGVPVSWMDAFLGNIPGSIGEVSTLMIFIGGAIILFGRVASWRIVAGVMIGMIATATLFNVIGSDTNPMFAMPWYWHLVLGGFAFGMMFMATDPVSASFTDKGKWSYGVLIGVMCVLIRVVNPAYPEGMMLAILFANLFAPLFDYLVVQANIKRRKSRG
>CP036327.1|QBH60496.1|5153995_5155339_+|Na(+)-translocating-NADH-quinone-reductase-subunit-A
MIKITKGLDLPIAGMPLQQISPAPAVKRVALLGEEYVGMRPAMAVKEGDRVKKGQILFEDKKIPGVCFTAPASGIVSAIHRGERRVLQSVVIDIEGNDAVAFTRYAADALAELPRDTVQQQLLASGQWTALRTRPFSKTPLPGSTPAAIFVNAMDTNPLAAEPQPIILAERAAFDAGLTVLTRLTDGKVHVCQPSGGKLGGHPLGQVCFNQFSGPHPAGLPGTHIHFLEPVSLNKQVWHLNYQDAIAIGKLFLDGELYCERIIALGGPQVTSPRLVKTTLGASLEDLLAGELQEGENRVISGSVLSGARAHGPHAFLGRFHLQVSVVKEGREKELFGWVMPGKEKFSITRTTLGHFFKRKRFHFSTDTNGGERAMVPIGNYERVMPLDILPTILLRDLLAGDTDSAQALGCLELDEEDLALCTYVCPGKYEYGPALRSVLTRIEQEG
>CP036327.1|QBH60495.1|5153829_5154039_-|hypothetical-protein
MPAMGKSSPFVILIISLAGIRNLNPDAGQGQLIDRMAEKKGRNGASSAQDGREASFLTLMMNRRKCNIS
>CP036327.1|QBH60494.1|5152843_5153584_-|murein-L,D-transpeptidase
MRKIALFIAMLLLPCVSFAGLLSSNSPTTPVSKEYKQQLMGSPVYIEIFKEERMLDLYVKMGETYQLLDSYRICNYSGGLGPKQRQGDFKSPEGFYNVTRSQLKPDSRFYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSVGCYAMTDSGIDEIFQFVTGALVFGQPSVQVSIYPFRMTNANMERHKYSYYADFWKQLKPGYDYFQQTHKPPIVSVTDGRYVVSKPLSHEVVQPQLASNYTLPETK
>CP036327.1|QBH60493.1|5152105_5152873_+|class-II-glutamine-amidotransferase
MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFQSPIAKLVQDYPIKSCSVVAHIRQANRGRVALENTHPFTRELWGRNWTYAHNGQLKGYKSLKTGNFHPVGETDSEKAFCWLLHRLTERYPRTPGNMLGVFKYIATLAGELREKGVFNMLLSDGRYVMAFCSTNLHWITRRAPFGVAKLLDQDVEIDFQRETTPNDVVTVIATQPLTANETWHKIMPGEWALFCLGERVV
>CP036327.1|QBH60503.1|5160278_5161139_-|glycerophosphodiester-phosphodiesterase
MKKILTALCLLATAGAWAAPQLIAHRGGTGDAPENTLPAIKLALENNAEAIWVTVQLSRDGVPVLYRSSDLSALTNSEGKVSSLTAAELAKVDAGWKWGDDSHPWRGKQATIPTLQSVLQQWPHTFFYIDIKSPDADPTVMGQRLLEVLKTTDSLDRVRVYSTEDRYIAALPPAIPRFVTRSETRTRLANISLSHQCQPASQRDGEQWYGLELKRKVEVVEKFTLGEGISPATLTWDKEAMDCFRSQDKAHIIFFGINSAEDYRTAIELGAGGVMVDSPAQAKSWQ
>CP036327.1|QBH60504.1|5161298_5162354_+|DNA-polymerase-IV
MRKIIHVDMDCFFAAVEMRDNPALRDIPLAIGGSRVQRGVISTANYPARKFGVRSAMPTATALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVSDSEHCHGSATLIAQEIRQTIERELRLTASAGVAPVKFLAKIASDMNKPNGQFVIAPHQVAEFVRALPLAKIPGVGKVSAAKLENMGLRTCGDVQNSDLAMLLKRFGKFGRILWERSHGIDEREIHNDRQRKSVGVERTLAEDIHEWPECEAIIENLYPELERRLAKVKPDLLIARQGIKLKFNDFQLTTQEHVWPRLNKEDLIATAHKAWDERRGGRGVRLVGLHVTLLDPQLERQLLLGI
>CP036327.1|QBH60505.1|5162356_5162809_+|GNAT-family-N-acetyltransferase
MHIRAYRDSDLPLLCQIFLRAVWETASRDYTPGQIAAWAQVDETRWRQKLADSIGLVAVVNSQPVGFITAIGTHIDLLFVSPDRARQGIGGALIEALCAQYPAQILTVDASITAKPCFTAHGFKVVAEQRVAARGEWFINYRMEKRVALR
>CP036327.1|QBH60506.1|5162851_5164309_-|cytosol-nonspecific-dipeptidase
MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEHIMGWAKEKGLHAERDQVGNILIRKGATAGMENRRPVALQAHLDMVPQKNNDTVHDFVKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADDSVAHGPLEVLLTMTEEAGMDGAFGLQANWLQADILINTDSEEEGEIYMGCAGGIDFTSNLALTREAIPAGFQSFKVTLKGLKGGHSGGDIHLGLGNANKLLSRFLAGHADELDLRLVDFNGGTLRNAIPREAYATVAVAADKADALKALVNTYQALLKNELEAKEKNLVVLVEAVDNDKAALTQASRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDDNVQIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGQYWTLLTELLKAIPAK
>CP036327.1|QBH60507.1|5164566_5165025_+|xanthine-phosphoribosyltransferase
MSEKYVVTWDMLQIHARKLASRLLPVEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPIAGR
>CP036327.1|QBH60508.1|5165130_5166375_+|esterase-FrsA
MSQANLSETLFKPRFKHPETSTLVRRFSAGKPQAMQSALSGNHVDHWYRLINRLMWIWRGVTPQEILDVQARIVMSEAERTDPELFDTVIGYRGGNWIFEWAKEAMQWQQKAGQEADPLLSGRHWLHASNLYSIAAYPHIKGDELAEQAQALANRAYEEAAQRLPGSLRELEFTIPGGSPITGFLHMPKGEGPFPTVLMCGGLDSLQTDYYNLYENYFSPLGIAMLTIDMPSIGFSSKWTLNQDTSLLHQHALRHLENVPWVDHTRVAAFGFRFGANIAVRLGYLEPQRLKAVACLGPVVHGLLVDPLHQGRVPEMYLDVLASRLGMHDASDEALRVELNRYSLKTQGLLGRRCPTPMLSGFWKDDPFSPEEESRLITSSSADGKLLEIPFNPVYRNFDHALRQIARWINHRFG
>CP036327.1|QBH60509.1|5166432_5166831_+|sigma-factor-binding-protein-Crl
MTLPSGHLKSKLIKKFTALGPYIREEQCHDNRFFFDCLAVCVNVKPAPEKREFWGWWMEMEAQESRFTYSYQFGLFNKEGSWQAVDIDDPEVSDRLEKTLREFHERAAALLTTFNLKLEPADDFSEPVRLRA
>CP036327.1|QBH60999.1|5167199_5167412_-|DUF1471-domain-containing-protein
MKTVSTIFSAAALSLFAFTASAHSVTATSNTLDSAEAMIAKKAKELNATDYKITSAHMGNKVTMSAVLDK
>CP036327.1|QBH60510.1|5167569_5167986_-|SRPBCC-family-protein
MATTTVSIEIPASVDQVWQLMGGFDSLPDWLPFIPKSMVSEGGRVRTLTTSDGGTVIERLEAFDNRQRSYSYSIIQAPFPVVDYLSTIAVVATADSNITRVEWSGSFTPVNVSDADAEALFSGIYRDGLQALKDNFSA
>CP036327.1|QBH60511.1|5168018_5168816_-|SDR-family-oxidoreductase
MKLDLTHKVAVVSGSTSGIGLGIAKGLAWAGATVVIVGRQQRGVDTAIAAINAEHPDAQLRGVVADLSTEEGVSALLAAEPHADVVVNNLGIFNDKDFFSVPDSEWMHFYNVNVLSGVRLSRHYAQGMIDNGWGRIIFVSSESGVAIPADMINYGVTKSANLAVSHGLAKRLAGTGVTVNAILPGPTFTEGLQEMLAEAATQSGRSPREQADEFVKTARPSSIIQRAADVDEVANLAVYLASPLSSATTGAALRVDGGVVDTLAM

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

859397 : 870284

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBH56712.1\|859397_862505_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
QBH56713.1\|862559_863825_+	MFS transporter	NA	NA	NA	NA
QBH56714.1\|863855_864944_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
QBH56715.1\|865030_865291_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
QBH56716.1\|865588_866449_+	class A broad-spectrum beta-lactamase SHV-1	A0A077SL40	Escherichia_phage	4.4e-156	99.7
QBH56717.1\|866469_867231_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
QBH56718.1\|867491_868394_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
QBH56719.1\|868405_869671_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	7.8e-234	99.8
QBH56720.1\|869663_870284_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_2

1263398 : 1336354

Klebsiella_phage(23.53%)

integrase,portal,terminase,tRNA,holin,tail,protease

attL 1290213:1290227|attR 1336694:1336708

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBH57067.1\|1263398_1263899_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
QBH57068.1\|1264015_1264462_+	DUF441 domain-containing protein	NA	NA	NA	NA
QBH60818.1\|1264445_1265237_-	AraC family transcriptional regulator	NA	NA	NA	NA
QBH57069.1\|1265338_1266523_+	MFS transporter	NA	NA	NA	NA
QBH57070.1\|1266554_1267247_-	hypothetical protein	NA	NA	NA	NA
QBH57071.1\|1267392_1267902_+	DUF523 domain-containing protein	NA	NA	NA	NA
QBH60819.1\|1267888_1268245_+	DUF488 domain-containing protein	NA	NA	NA	NA
QBH57072.1\|1268234_1268474_-	DUF333 domain-containing protein	NA	NA	NA	NA
QBH57073.1\|1268774_1269788_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	1.1e-12	33.8
QBH57074.1\|1269845_1269947_+	hypothetical protein	NA	NA	NA	NA
QBH60820.1\|1269946_1270021_+	protein YoaJ	NA	NA	NA	NA
QBH57075.1\|1270138_1270264_+	hypothetical protein	NA	NA	NA	NA
QBH57076.1\|1270323_1270587_-	DUF2534 family protein	NA	NA	NA	NA
QBH57077.1\|1270717_1271356_-	leucine efflux protein LeuE	NA	NA	NA	NA
QBH57078.1\|1271445_1272360_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
QBH57079.1\|1272575_1272767_+	hypothetical protein	NA	NA	NA	NA
QBH57080.1\|1273021_1274065_-	type II asparaginase	NA	NA	NA	NA
QBH57081.1\|1274367_1275576_+	HD domain-containing protein	NA	NA	NA	NA
QBH57082.1\|1275649_1277434_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
QBH57083.1\|1277440_1278331_-	LysR family transcriptional regulator	NA	NA	NA	NA
QBH57084.1\|1278451_1279960_+	UbiD family decarboxylase	NA	NA	NA	NA
QBH57085.1\|1280270_1280957_-	EAL domain-containing protein	NA	NA	NA	NA
QBH57086.1\|1281354_1281534_-	hypothetical protein	NA	NA	NA	NA
QBH57087.1\|1281573_1282206_-	DNA-binding protein	NA	NA	NA	NA
QBH57088.1\|1282772_1282970_+	hypothetical protein	NA	NA	NA	NA
QBH57089.1\|1283085_1284096_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
QBH57090.1\|1284092_1285499_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
QBH57091.1\|1285554_1286442_-	manganese catalase family protein	NA	NA	NA	NA
QBH57092.1\|1286458_1286965_-	ferritin-like domain-containing protein	NA	NA	NA	NA
QBH57093.1\|1286991_1287486_-	ferritin-like domain-containing protein	NA	NA	NA	NA
QBH57094.1\|1287576_1287762_-	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA
QBH57095.1\|1288383_1289577_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
QBH57096.1\|1289689_1289917_+	DUF1272 domain-containing protein	NA	NA	NA	NA
QBH57097.1\|1289937_1290123_-	hypothetical protein	NA	NA	NA	NA
1290213:1290227	attL	NA	NA	NA	NA
QBH57098.1\|1290365_1290689_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
QBH57099.1\|1290681_1291074_+	amino acid-binding protein	NA	NA	NA	NA
QBH57100.1\|1291070_1291784_+	ArsR family transcriptional regulator	NA	NA	NA	NA
QBH57101.1\|1292056_1292209_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
QBH57102.1\|1292417_1293218_+	hypothetical protein	NA	NA	NA	NA
QBH57103.1\|1294252_1295959_-	hypothetical protein	NA	NA	NA	NA
QBH60821.1\|1296155_1296449_-	DUF4113 domain-containing protein	I6RSM4	Salmonella_phage	3.9e-27	80.0
QBH57104.1\|1297291_1297714_-	hypothetical protein	K7P834	Enterobacteria_phage	1.2e-24	43.8
QBH57105.1\|1297791_1297974_-	Hin recombinase	A0A286S1P7	Klebsiella_phage	5.9e-18	83.3
QBH57106.1\|1300827_1303896_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	66.3
QBH57107.1\|1303892_1304279_-	nitrite transporter	A0A286S2A6	Klebsiella_phage	4.7e-33	50.8
QBH57108.1\|1304286_1304769_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	8.5e-56	67.7
QBH57109.1\|1304755_1305229_-	hypothetical protein	A0A286S298	Klebsiella_phage	3.9e-53	63.5
QBH57110.1\|1305228_1307925_-\|tail	phage tail tape measure protein	K7PKR0	Enterobacteria_phage	2.2e-201	62.6
QBH57111.1\|1307905_1308223_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.4e-19	51.5
QBH57112.1\|1308243_1308639_-\|tail	phage tail protein	M9NZD7	Enterobacteria_phage	1.9e-08	27.5
QBH57113.1\|1308681_1308864_-\|tail	phage tail protein	K7PGX1	Enterobacteria_phage	2.1e-15	72.7
QBH57114.1\|1308860_1309163_-	hypothetical protein	M9NYX0	Enterobacteria_phage	2.0e-34	70.2
QBH57115.1\|1309170_1309569_-\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	3.2e-40	57.8
QBH57116.1\|1309565_1310117_-\|tail	phage tail protein	K7P7A8	Enterobacteria_phage	1.6e-53	67.3
QBH57117.1\|1310106_1310400_-	ATP-binding protein	NA	NA	NA	NA
QBH57118.1\|1310392_1310719_-	DUF2190 family protein	K7PJY3	Enterobacterial_phage	4.0e-33	66.4
QBH57119.1\|1310799_1312815_-\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	0.0e+00	84.6
QBH57120.1\|1312759_1314259_-\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	1.9e-247	83.2
QBH57121.1\|1314255_1314471_-	hypothetical protein	A5LH28	Enterobacteria_phage	7.7e-25	77.1
QBH57122.1\|1314467_1316576_-\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	83.2
QBH57123.1\|1316575_1317067_-	DUF1441 family protein	K7PJY2	Enterobacterial_phage	6.4e-67	84.0
QBH57124.1\|1317388_1317574_-	hypothetical protein	Q8W634	Enterobacteria_phage	1.9e-11	61.1
QBH60822.1\|1317639_1317900_-	hypothetical protein	NA	NA	NA	NA
QBH57125.1\|1318125_1318371_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	3.9e-33	95.1
QBH57126.1\|1318805_1319018_-	hypothetical protein	A0A286N2Q9	Klebsiella_phage	3.9e-21	70.0
QBH60823.1\|1319184_1319379_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	1.1e-25	90.6
QBH57127.1\|1319329_1319605_-	hypothetical protein	G8C7W1	Escherichia_phage	7.3e-20	60.7
QBH57128.1\|1319601_1319946_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.0e-38	80.7
QBH57129.1\|1319942_1320482_-	hypothetical protein	A0A286N2Q6	Klebsiella_phage	2.3e-102	100.0
QBH60824.1\|1320478_1320778_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	2.9e-46	99.0
QBH60825.1\|1321391_1321838_+	hypothetical protein	NA	NA	NA	NA
QBH57130.1\|1321743_1322001_-	hypothetical protein	A0A286N2Q3	Klebsiella_phage	2.8e-42	98.8
QBH57131.1\|1322313_1322892_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	7.6e-51	57.2
QBH57132.1\|1322905_1323886_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.9e-134	66.9
QBH57133.1\|1323898_1324276_-	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	2.3e-48	73.6
QBH57134.1\|1324285_1325095_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	5.9e-110	69.3
QBH57135.1\|1326033_1326213_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	4.6e-15	73.1
QBH57136.1\|1326450_1326912_-	hypothetical protein	K7PJS5	Enterobacterial_phage	1.7e-69	88.2
QBH57137.1\|1326946_1327189_-	XRE family transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.3e-25	80.3
QBH57138.1\|1327286_1327982_+	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	3.2e-88	71.7
QBH57139.1\|1328283_1328643_+	hypothetical protein	NA	NA	NA	NA
QBH57140.1\|1328852_1329770_+	hypothetical protein	A0A1W6JP69	Morganella_phage	8.9e-46	36.5
QBH57141.1\|1329859_1330159_+	hypothetical protein	K7PJS4	Enterobacterial_phage	1.1e-13	48.6
QBH57142.1\|1330158_1330944_+	hypothetical protein	A4JX52	Burkholderia_virus	2.2e-61	50.6
QBH57143.1\|1331631_1331892_+	DUF4752 family protein	T1S9K2	Salmonella_phage	7.4e-30	75.0
QBH57144.1\|1331888_1332095_+	hypothetical protein	R9TRD3	Aeromonas_phage	1.1e-31	97.1
QBH57145.1\|1332743_1333112_+	hypothetical protein	A0A088CE95	Shigella_phage	1.1e-18	55.2
QBH57146.1\|1333104_1333323_+	hypothetical protein	G8C7S3	Escherichia_phage	2.7e-09	53.4
QBH57147.1\|1333322_1333595_+	hypothetical protein	K7PKM4	Enterobacterial_phage	4.4e-09	40.4
QBH57148.1\|1333623_1333860_+	excisionase	NA	NA	NA	NA
QBH57149.1\|1333849_1334992_+\|integrase	integrase	Q77Z02	Phage_21	5.9e-172	81.9
QBH57150.1\|1335103_1336354_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
1336694:1336708	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1595107 : 1604572

Brazilian_cedratvirus(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBH57363.1\|1595107_1596829_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	9.0e-15	34.0
QBH57364.1\|1596873_1597575_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
QBH57365.1\|1597928_1598147_+	translation initiation factor IF-1	NA	NA	NA	NA
QBH57366.1\|1598268_1600548_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
QBH57367.1\|1600578_1600896_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
QBH57368.1\|1601221_1601443_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
QBH57369.1\|1601519_1603460_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
QBH57370.1\|1603456_1604572_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_4

2062305 : 2099108

Klebsiella_phage(16.67%)

tail,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBH57768.1\|2062305_2063823_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	9.5e-85	36.3
QBH57769.1\|2064154_2065630_-	MFS transporter	A0A0P0IY73	Acinetobacter_phage	6.9e-48	29.0
QBH57770.1\|2065689_2067837_-	lysine decarboxylase CadA	NA	NA	NA	NA
QBH57771.1\|2067919_2069254_-	cadaverine/lysine antiporter	NA	NA	NA	NA
QBH57772.1\|2069619_2071188_-	transcriptional regulator CadC	NA	NA	NA	NA
QBH57773.1\|2071481_2071754_-	DUF1471 domain-containing protein	NA	NA	NA	NA
QBH57774.1\|2071847_2072768_-	LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase	A0A1W6JP29	Morganella_phage	5.4e-51	40.1
QBH57775.1\|2073278_2074145_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
QBH57776.1\|2074167_2075193_-	type 1 fimbrial protein	NA	NA	NA	NA
QBH57777.1\|2075194_2077630_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
QBH57778.1\|2077640_2078336_-	molecular chaperone	NA	NA	NA	NA
QBH57779.1\|2078394_2078955_-	type 1 fimbrial protein	NA	NA	NA	NA
QBH57780.1\|2079425_2080088_+	LuxR family transcriptional regulator	NA	NA	NA	NA
QBH57781.1\|2080065_2080371_+	hypothetical protein	NA	NA	NA	NA
QBH57782.1\|2080423_2081728_-	citrate synthase	NA	NA	NA	NA
QBH57783.1\|2082238_2082409_+	ATP-NAD kinase	NA	NA	NA	NA
QBH57784.1\|2082487_2082889_-	hydroxyisourate hydrolase	NA	NA	NA	NA
QBH57785.1\|2083284_2083578_-	hypothetical protein	NA	NA	NA	NA
QBH57786.1\|2084240_2084558_-	hypothetical protein	I6PCW5	Cronobacter_phage	1.4e-22	52.6
QBH57787.1\|2084557_2084797_-	hypothetical protein	K7P7N3	Enterobacteria_phage	1.3e-17	53.2
QBH57788.1\|2084901_2085702_-	hypothetical protein	NA	NA	NA	NA
QBH57789.1\|2085711_2087703_-	hypothetical protein	A0A286S1P0	Klebsiella_phage	9.0e-27	28.7
QBH57790.1\|2087911_2088670_-	hypothetical protein	A0A1I9SEW2	Klebsiella_phage	4.6e-48	64.0
QBH57791.1\|2089564_2090248_-	DUF2313 domain-containing protein	NA	NA	NA	NA
QBH57792.1\|2090244_2091393_-\|plate	baseplate J/gp47 family protein	R9TN81	Rhizobium_phage	7.1e-16	27.5
QBH57793.1\|2091382_2091832_-	hypothetical protein	A0A0C4UR04	Shigella_phage	3.8e-18	40.7
QBH60864.1\|2091824_2092373_-\|plate	baseplate assembly protein	A0A077KAY0	Edwardsiella_phage	5.4e-06	33.3
QBH57794.1\|2092408_2093488_-\|tail	phage tail protein	Q8SBG7	Shigella_phage	1.2e-38	31.3
QBH57795.1\|2096795_2096987_-	hypothetical protein	NA	NA	NA	NA
QBH57796.1\|2096944_2097223_-\|tail	phage tail assembly protein	NA	NA	NA	NA
QBH57797.1\|2097224_2097593_-\|tail	phage tail protein	NA	NA	NA	NA
QBH57798.1\|2097596_2099108_-\|tail	phage tail protein	B5TK67	Pseudomonas_phage	2.0e-106	44.2

DBSCAN-SWA_5

2105477 : 2137249

Escherichia_phage(25.0%)

lysis,terminase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBH57808.1\|2105477_2107601_-\|terminase	terminase	A0A2K9V3X4	Faecalibacterium_phage	1.6e-98	35.9
QBH57809.1\|2107542_2108106_-	hypothetical protein	NA	NA	NA	NA
QBH57810.1\|2108390_2109104_-	hypothetical protein	NA	NA	NA	NA
QBH57811.1\|2109172_2109811_-	hypothetical protein	NA	NA	NA	NA
QBH57812.1\|2110214_2110598_-	hypothetical protein	Q6UAR9	Klebsiella_phage	7.0e-61	91.3
QBH60865.1\|2110634_2110889_-	Rz1 lytic protein	U5P461	Shigella_phage	5.5e-22	66.7
QBH57813.1\|2110776_2111166_-	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	1.5e-23	48.4
QBH57814.1\|2111162_2111693_-	lysozyme	G9L6J6	Escherichia_phage	2.7e-79	79.1
QBH57815.1\|2111695_2111944_-\|lysis	lysis protein	NA	NA	NA	NA
QBH57816.1\|2112371_2112896_+	hypothetical protein	NA	NA	NA	NA
QBH57817.1\|2113240_2113930_-	antiterminator	I6PDF8	Cronobacter_phage	1.9e-56	54.5
QBH57818.1\|2113926_2114067_-	YlcG family protein	NA	NA	NA	NA
QBH57819.1\|2114063_2114645_-	recombination protein NinG	E7C9S3	Salmonella_phage	8.7e-39	43.8
QBH57820.1\|2114637_2115312_-	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	5.1e-99	74.0
QBH57821.1\|2115308_2115476_-	NinE family protein	G8C7V4	Escherichia_phage	6.2e-14	75.0
QBH57822.1\|2115475_2115913_-	recombination protein NinB	G8C7V3	Escherichia_phage	7.4e-59	77.7
QBH60866.1\|2116162_2116411_-	hypothetical protein	NA	NA	NA	NA
QBH57823.1\|2117673_2118093_-	hypothetical protein	A0A2R2Z312	Escherichia_phage	7.7e-37	54.3
QBH57824.1\|2118301_2118565_-	DUF4752 family protein	T1S9K2	Salmonella_phage	2.2e-29	75.6
QBH60867.1\|2118561_2119050_-	hypothetical protein	E7C9P6	Salmonella_phage	1.3e-22	52.4
QBH57825.1\|2119286_2119580_-	protein ren	M1FPD5	Enterobacteria_phage	1.4e-24	60.2
QBH57826.1\|2121363_2121684_-	hypothetical protein	A0A0M4RU01	Salmonella_phage	7.7e-37	69.8
QBH57827.1\|2121723_2121945_-	helix-turn-helix domain-containing protein	Q716D6	Shigella_phage	1.8e-13	55.1
QBH57828.1\|2122047_2122743_+	helix-turn-helix transcriptional regulator	K7P7I4	Enterobacteria_phage	8.2e-76	62.4
QBH57829.1\|2122762_2123197_+	hypothetical protein	NA	NA	NA	NA
QBH57830.1\|2123846_2124041_+	hypothetical protein	NA	NA	NA	NA
QBH57831.1\|2124128_2125130_+	hypothetical protein	M9P0E1	Enterobacteria_phage	4.2e-65	90.4
QBH57832.1\|2125137_2125422_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.1e-39	79.8
QBH57833.1\|2125433_2125667_+	hypothetical protein	I2GUH8	Acinetobacter_phage	1.8e-11	48.6
QBH57834.1\|2125663_2126167_+	hypothetical protein	A0A0F7L7F5	uncultured_marine_virus	7.9e-12	29.5
QBH57835.1\|2126163_2126787_+	YqaJ-like viral recombinase	S0A2A9	Cellulophaga_phage	7.9e-46	48.6
QBH57836.1\|2126783_2126942_+	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	3.0e-10	60.8
QBH57837.1\|2126938_2127595_+	DNA methyltransferase	G8C7S6	Escherichia_phage	7.9e-113	87.0
QBH57838.1\|2127591_2128662_+	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	4.7e-139	66.4
QBH57839.1\|2128658_2128877_+	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.6e-09	47.2
QBH57840.1\|2128878_2129094_+	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	3.6e-06	48.1
QBH57841.1\|2129253_2129499_+	excisionase	A0A286S2A4	Klebsiella_phage	1.4e-35	92.1
QBH57842.1\|2129541_2130801_+	DUF3596 domain-containing protein	A0A286S1S8	Klebsiella_phage	2.1e-223	89.4
QBH57843.1\|2130797_2131577_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	1.1e-60	82.7
QBH57844.1\|2131629_2132025_+	hypothetical protein	NA	NA	NA	NA
QBH57845.1\|2132064_2132808_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.1e-25	30.0
QBH57846.1\|2132804_2133809_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
QBH57847.1\|2133890_2134634_-	copper homeostasis protein CutC	NA	NA	NA	NA
QBH57848.1\|2134710_2135280_-	VOC family protein	NA	NA	NA	NA
QBH57849.1\|2135515_2137249_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	1.4e-87	33.8

DBSCAN-SWA_6

2394967 : 2401871

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBH58050.1\|2394967_2396446_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.4e-29	28.3
QBH58051.1\|2396442_2397165_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
QBH58052.1\|2397483_2398845_+	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
QBH60885.1\|2399090_2399984_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	2.1e-15	30.2
QBH58053.1\|2400223_2400997_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-25	36.3
QBH58054.1\|2401007_2401871_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5

DBSCAN-SWA_7

2467165 : 2561948

Enterobacteria_phage(26.09%)

lysis,portal,tRNA,terminase,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBH58111.1\|2467165_2468098_-\|tRNA	tRNA dihydrouridine(16) synthase DusC	NA	NA	NA	NA
QBH58112.1\|2468455_2468854_+	hypothetical protein	NA	NA	NA	NA
QBH58113.1\|2468850_2469546_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
QBH58114.1\|2469673_2470558_+	cytidine deaminase	NA	NA	NA	NA
QBH58115.1\|2470833_2471550_+	outer membrane permeability protein SanA	NA	NA	NA	NA
QBH58116.1\|2471620_2472631_-	galactose/methyl galactoside ABC transporter permease MglC	NA	NA	NA	NA
QBH58117.1\|2472646_2474167_-	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	F2Y2R6	Organic_Lake_phycodnavirus	3.1e-11	32.0
QBH58118.1\|2474285_2475284_-	galactose/glucose ABC transporter substrate-binding protein MglB	NA	NA	NA	NA
QBH58119.1\|2475580_2476603_-	HTH-type transcriptional regulator GalS	NA	NA	NA	NA
QBH58120.1\|2476758_2477916_-	DUF418 family protein	NA	NA	NA	NA
QBH58121.1\|2477931_2478600_-	GTP cyclohydrolase I FolE	M1Q6X8	Cellulophaga_phage	3.4e-55	55.8
QBH58122.1\|2478960_2479794_+	S-formylglutathione hydrolase	NA	NA	NA	NA
QBH58123.1\|2479864_2481838_-	catecholate siderophore receptor CirA	A0A0P0I887	Acinetobacter_phage	3.7e-12	36.5
QBH58124.1\|2482336_2483806_-	amino acid permease	NA	NA	NA	NA
QBH58125.1\|2483984_2484851_-	LysR family transcriptional regulator	NA	NA	NA	NA
QBH58126.1\|2484941_2485142_-	hypothetical protein	NA	NA	NA	NA
QBH58127.1\|2485116_2486166_+	YeiH family protein	NA	NA	NA	NA
QBH58128.1\|2486237_2487092_+	deoxyribonuclease IV	A0A1V0SBL9	Catovirus	1.5e-23	33.2
QBH58129.1\|2487143_2488838_-	PTS fructose transporter subunit IIBC	NA	NA	NA	NA
QBH58130.1\|2488854_2489793_-	1-phosphofructokinase	NA	NA	NA	NA
QBH58131.1\|2489793_2490924_-	fused PTS fructose transporter subunit IIA/HPr protein	NA	NA	NA	NA
QBH58132.1\|2491112_2491262_-	glucose-inhibited division protein A	NA	NA	NA	NA
QBH58133.1\|2491260_2492442_+	sugar efflux transporter SetB	NA	NA	NA	NA
QBH58134.1\|2492801_2493581_-	hypothetical protein	G9IA57	Pseudomonas_phage	1.4e-39	39.2
QBH58135.1\|2494019_2494274_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
QBH58136.1\|2494421_2494994_+	elongation factor P-like protein YeiP	NA	NA	NA	NA
QBH58137.1\|2495064_2496255_-	mannonate dehydratase	NA	NA	NA	NA
QBH58138.1\|2496462_2497929_+	fructuronate reductase	H8ZJP8	Ostreococcus_tauri_virus	1.9e-45	31.2
QBH58139.1\|2498049_2499027_+	GTP-binding protein	NA	NA	NA	NA
QBH58140.1\|2499070_2499778_+	phosphatase PAP2 family protein	NA	NA	NA	NA
QBH58141.1\|2500204_2500774_+	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	A0A1V0DZX6	Clostridioides_phage	3.1e-12	38.0
QBH58142.1\|2500962_2502525_+	cyclic di-GMP phosphodiesterase	NA	NA	NA	NA
QBH58143.1\|2502593_2504399_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
QBH58144.1\|2504408_2505503_+	microcin C ABC transporter permease YejB	NA	NA	NA	NA
QBH58145.1\|2505502_2506528_+	ABC transporter permease subunit	NA	NA	NA	NA
QBH58146.1\|2506529_2508119_+	microcin C ABC transporter ATP-binding protein YejF	G9BWD6	Planktothrix_phage	1.0e-20	33.3
QBH58147.1\|2508122_2508467_-	hypothetical protein	NA	NA	NA	NA
QBH58148.1\|2508798_2509995_-	Bcr/CflA family multidrug efflux MFS transporter	S4TR35	Salmonella_phage	2.6e-21	24.2
QBH58149.1\|2509991_2510711_-	16S rRNA pseudouridine(516) synthase RsuA	NA	NA	NA	NA
QBH58150.1\|2510858_2512616_+	DEAD/DEAH box helicase	M4Q3N1	Vibrio_phage	6.4e-101	41.8
QBH58151.1\|2512752_2513037_+	50S ribosomal protein L25	NA	NA	NA	NA
QBH58152.1\|2513095_2513983_-	LysR family transcriptional regulator	NA	NA	NA	NA
QBH58153.1\|2515390_2515987_-	GDP-mannose pyrophosphatase	NA	NA	NA	NA
QBH58154.1\|2516069_2516831_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
QBH58155.1\|2516850_2517858_-	nucleoid-associated protein	A0A1V0E8C0	Vibrio_phage	2.4e-84	49.8
QBH58156.1\|2518044_2518272_+	DUF1414 domain-containing protein	NA	NA	NA	NA
QBH58157.1\|2518290_2520051_+	DUF3413 domain-containing protein	NA	NA	NA	NA
QBH58158.1\|2520304_2521834_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	1.8e-131	65.0
QBH58159.1\|2530893_2531484_-\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	2.5e-81	77.0
QBH58160.1\|2531515_2532226_-	peptidase P60	Q6UAW4	Klebsiella_phage	1.1e-136	90.7
QBH58161.1\|2532227_2532983_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	1.3e-130	84.1
QBH58162.1\|2532979_2533327_-\|tail	phage tail protein	K7PJT2	Enterobacteria_phage	4.7e-40	67.8
QBH58163.1\|2533331_2536475_-\|tail	phage tail tape measure protein	E4WL33	Enterobacteria_phage	0.0e+00	72.9
QBH58164.1\|2536458_2536773_-\|tail	phage tail assembly protein T	E4WL32	Enterobacteria_phage	5.0e-41	75.0
QBH58165.1\|2536793_2537222_-\|tail	phage minor tail protein G	M9NZD7	Enterobacteria_phage	2.7e-37	60.0
QBH58166.1\|2537232_2537976_-\|tail	phage tail protein	K7PKX6	Enterobacterial_phage	1.7e-111	83.0
QBH58167.1\|2537984_2538386_-\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	8.6e-54	74.0
QBH58168.1\|2538382_2538961_-\|tail	phage tail protein	K7PMB7	Enterobacterial_phage	1.7e-79	81.2
QBH58169.1\|2538964_2539240_-	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	1.1e-23	57.1
QBH58170.1\|2539232_2539559_-	DUF2190 family protein	K7PJY3	Enterobacterial_phage	1.4e-33	65.7
QBH58171.1\|2539642_2541670_-\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	0.0e+00	81.8
QBH58172.1\|2541614_2543117_-\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	2.1e-246	83.2
QBH58173.1\|2543116_2543329_-	hypothetical protein	A5LH28	Enterobacteria_phage	2.9e-24	80.0
QBH58174.1\|2543325_2545428_-\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	84.0
QBH58175.1\|2545427_2545916_-	DUF1441 family protein	K7PJY2	Enterobacterial_phage	1.3e-72	87.7
QBH60889.1\|2546147_2546462_-	hypothetical protein	Q6UAS0	Klebsiella_phage	7.5e-29	62.8
QBH58176.1\|2546566_2546875_-	hypothetical protein	NA	NA	NA	NA
QBH60890.1\|2546956_2547433_-	DUF2514 domain-containing protein	NA	NA	NA	NA
QBH58177.1\|2547465_2547999_-	lysozyme	G9L6J6	Escherichia_phage	1.6e-84	83.3
QBH58178.1\|2548000_2548255_-\|lysis	lysis protein	A0A127KNH9	Pseudomonas_phage	1.3e-07	38.0
QBH58179.1\|2548378_2548567_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
QBH58180.1\|2548630_2549041_+	HicB family protein	NA	NA	NA	NA
QBH58181.1\|2549076_2550126_-	site-specific DNA-methyltransferase	K7PKK9	Enterobacteria_phage	2.1e-171	80.2
QBH58182.1\|2550275_2550467_-	TrmB family transcriptional regulator	Q9MC00	Enterobacteria_phage	1.9e-22	82.8
QBH58183.1\|2550660_2551359_-	antitermination protein	NA	NA	NA	NA
QBH58184.1\|2551380_2552442_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.9e-108	54.6
QBH60891.1\|2552595_2553480_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	2.3e-123	71.8
QBH58185.1\|2553479_2553737_-	hypothetical protein	Q8W639	Enterobacteria_phage	3.3e-22	75.0
QBH58186.1\|2553733_2554612_-	GntR family transcriptional regulator	K7PLZ7	Enterobacterial_phage	3.7e-33	57.7
QBH58187.1\|2554608_2554788_-	DUF4222 domain-containing protein	NA	NA	NA	NA
QBH58188.1\|2554789_2555509_-	phage regulatory protein/antirepressor Ant	A0A2I7RHG4	Vibrio_phage	5.7e-48	51.4
QBH58189.1\|2555489_2555687_-	hypothetical protein	NA	NA	NA	NA
QBH58190.1\|2555683_2556241_-	DNA-binding protein	A0A1C9II13	Salmonella_phage	1.3e-68	68.2
QBH58191.1\|2556263_2556479_-	cell division protein	NA	NA	NA	NA
QBH58192.1\|2556578_2557205_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	1.2e-46	48.8
QBH58193.1\|2557829_2558201_+	hypothetical protein	Q8HAA1	Salmonella_phage	2.0e-52	82.9
QBH58194.1\|2558253_2559084_+	DUF2303 family protein	Q8HAA2	Salmonella_phage	3.8e-128	82.8
QBH58195.1\|2559216_2559744_+	HD family hydrolase	A0A0P0ZCH9	Stx2-converting_phage	1.3e-62	65.7
QBH58196.1\|2559743_2559941_+	hypothetical protein	NA	NA	NA	NA
QBH58197.1\|2559942_2560515_+	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	1.2e-80	75.1
QBH58198.1\|2560557_2560767_+	hypothetical protein	NA	NA	NA	NA
QBH58199.1\|2560769_2561948_+	recombinase	A0A2H4J1K3	uncultured_Caudovirales_phage	2.6e-29	29.5

DBSCAN-SWA_8

5417576 : 5433166

Escherichia_phage(31.58%)

integrase,tRNA

attL 5417307:5417320|attR 5425846:5425859

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5417307:5417320	attL	NA	NA	NA	NA
QBH60740.1\|5417576_5418962_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4
QBH60741.1\|5419007_5419220_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
QBH60742.1\|5419221_5420088_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
QBH60743.1\|5420126_5420450_+	hypothetical protein	NA	NA	NA	NA
QBH61009.1\|5420519_5421563_-\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	2.9e-178	85.6
QBH60744.1\|5421559_5421895_-	DNA-binding protein	NA	NA	NA	NA
QBH60745.1\|5421896_5422112_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	2.0e-12	51.4
QBH60746.1\|5422113_5422332_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.6e-09	47.2
QBH60747.1\|5422328_5423096_-	dcm methylase	D5LH17	Escherichia_phage	1.0e-66	53.8
QBH60748.1\|5423092_5423749_-	DNA methyltransferase	G8C7S6	Escherichia_phage	1.3e-110	85.2
QBH60749.1\|5423745_5424174_-	regulator	M9NYX4	Enterobacteria_phage	2.6e-64	81.7
QBH60750.1\|5424170_5424851_-	exonuclease	A0A0M3ULE0	Salmonella_phage	7.9e-124	93.4
QBH60751.1\|5424852_5425140_-	hypothetical protein	NA	NA	NA	NA
QBH60752.1\|5425136_5425982_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	2.0e-68	60.7
5425846:5425859	attR	NA	NA	NA	NA
QBH60753.1\|5425997_5426282_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	6.6e-40	79.8
QBH60754.1\|5426289_5427261_-	hypothetical protein	A0A077KCC0	Edwardsiella_phage	1.7e-39	77.7
QBH60755.1\|5427349_5427544_-	hypothetical protein	NA	NA	NA	NA
QBH60756.1\|5428230_5428890_-	helix-turn-helix domain-containing protein	K7P7K3	Enterobacteria_phage	1.9e-69	61.5
QBH60757.1\|5428998_5429217_+	XRE family transcriptional regulator	A0A1P8DTF8	Proteus_phage	1.4e-13	50.7
QBH60758.1\|5429256_5429478_+	transcriptional regulator	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
QBH60759.1\|5429563_5430424_+	replication protein	K7PGT1	Enterobacteria_phage	1.3e-59	52.9
QBH60760.1\|5431263_5431557_+	protein ren	M1FPD5	Enterobacteria_phage	2.1e-25	62.4
QBH61010.1\|5431793_5432342_+	hypothetical protein	E7C9P6	Salmonella_phage	1.1e-22	52.4
QBH60761.1\|5432746_5433166_+	hypothetical protein	A0A2R2Z312	Escherichia_phage	7.7e-37	54.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP036330

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8360 : 36699

Klebsiella_phage(88.1%)

capsid,portal,transposase,head,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBH61219.1\|8360_8951_-\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	4.3e-78	76.0
QBH61220.1\|9001_9415_-	hypothetical protein	G8C7Q7	Escherichia_phage	2.2e-52	67.9
QBH61221.1\|9456_10167_-	peptidase P60	Q6UAW4	Klebsiella_phage	8.5e-137	90.7
QBH61222.1\|10168_10924_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	6.7e-124	80.1
QBH61223.1\|10920_11259_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	2.4e-57	88.4
QBH61224.1\|11258_14639_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	71.6
QBH61264.1\|14638_14851_-	hypothetical protein	Q6UAW9	Klebsiella_phage	5.8e-33	90.3
QBH61225.1\|14871_15237_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	8.1e-51	88.5
QBH61226.1\|15293_15755_-\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
QBH61227.1\|15786_16188_-	hypothetical protein	Q6UAX1	Klebsiella_phage	1.7e-62	94.0
QBH61228.1\|16184_16574_-	hypothetical protein	Q6UAX2	Klebsiella_phage	9.6e-58	86.0
QBH61229.1\|16554_16893_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	5.6e-54	91.1
QBH61230.1\|16889_17207_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
QBH61231.1\|17640_18927_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	7.7e-205	84.6
QBH61232.1\|19004_19925_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	4.8e-148	87.9
QBH61233.1\|19961_21221_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	7.3e-224	90.2
QBH61234.1\|21220_21400_-	hypothetical protein	Q6UAX9	Klebsiella_phage	2.4e-16	80.7
QBH61235.1\|21393_23103_-\|terminase	terminase large subunit	Q6UAY0	Klebsiella_phage	0.0e+00	94.9
QBH61236.1\|23137_23572_-\|terminase	terminase	Q6UAY1	Klebsiella_phage	2.4e-73	95.8
QBH61237.1\|23787_23988_-	hypothetical protein	Q6UAR8	Klebsiella_phage	1.3e-10	75.8
QBH61238.1\|24073_24505_-	hypothetical protein	Q6UAS0	Klebsiella_phage	2.6e-40	60.6
QBH61239.1\|24501_24786_-	hypothetical protein	Q6UAS1	Klebsiella_phage	2.4e-05	37.5
QBH61240.1\|24782_25145_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	7.8e-62	92.5
QBH61241.1\|25128_26400_-	hypothetical protein	Q6UAS3	Klebsiella_phage	4.4e-35	37.0
QBH61242.1\|26669_26969_-	DUF4406 domain-containing protein	Q6UAS4	Klebsiella_phage	3.0e-51	96.0
QBH61243.1\|27080_27293_-	hypothetical protein	Q6UAS6	Klebsiella_phage	1.6e-19	89.5
QBH61244.1\|27222_27699_-	hypothetical protein	Q6UAS7	Klebsiella_phage	1.7e-61	79.7
QBH61245.1\|27715_28207_-	hypothetical protein	Q6UAS8	Klebsiella_phage	6.4e-83	90.8
QBH61246.1\|28203_28515_-	hypothetical protein	Q6UAS9	Klebsiella_phage	6.3e-44	89.1
QBH61265.1\|28573_29635_-	site-specific DNA-methyltransferase	Q6UAT0	Klebsiella_phage	7.1e-172	93.2
QBH61266.1\|29952_30180_-	hypothetical protein	Q6UAT1	Klebsiella_phage	1.6e-28	84.0
QBH61267.1\|30191_30413_-	hypothetical protein	O64358	Escherichia_phage	3.0e-32	90.4
QBH61247.1\|30583_30892_+	type II toxin-antitoxin system RelE/ParE family toxin	Q6UAT3	Klebsiella_phage	3.9e-46	94.2
QBH61248.1\|30891_31179_+	XRE family transcriptional regulator	Q6UAT4	Klebsiella_phage	1.7e-43	96.8
QBH61249.1\|31224_32433_-\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.1e-192	82.8
QBH61250.1\|32554_32758_-	hypothetical protein	Q6UAT5	Klebsiella_phage	3.5e-19	76.6
QBH61251.1\|32861_33089_-	hypothetical protein	O64355	Escherichia_phage	2.8e-25	80.3
QBH61252.1\|33109_33436_-	hypothetical protein	Q6UAT7	Klebsiella_phage	3.9e-52	94.4
QBH61253.1\|34053_34662_-	3'-5' exonuclease	Q6UAU3	Klebsiella_phage	7.9e-99	89.0
QBH61254.1\|35073_35811_-	phage antitermination protein	Q6UAU4	Klebsiella_phage	1.1e-118	84.1
QBH61255.1\|35800_36010_-	hypothetical protein	Q6UAU5	Klebsiella_phage	7.7e-30	92.8
QBH61256.1\|36090_36699_+	XRE family transcriptional regulator	Q6UAU6	Klebsiella_phage	1.3e-104	92.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP036328

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP036327

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP036330

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection