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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP026387 Leclercia sp. LSNIH3 chromosome, complete genome 0 crisprs RT,DEDDh,cas3,DinG,PD-DExK,WYL,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2 0 0 4 0
CP026390 Leclercia sp. LSNIH3 plasmid pLEC-5e18, complete sequence 0 crisprs csa3,RT 0 0 2 0
CP026391 Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence 0 crisprs PD-DExK,RT,csa3 0 0 1 0
CP026388 Leclercia sp. LSNIH3 plasmid pLEC-2975, complete sequence 0 crisprs NA 0 0 0 0
CP026389 Leclercia sp. LSNIH3 plasmid pKPC-3714, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. CP026387
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 174694 : 217095 42 Escherichia_phage(55.88%) terminase,coat,holin,tail NA
DBSCAN-SWA_2 3474374 : 3481805 7 Mycobacterium_phage(33.33%) NA NA
DBSCAN-SWA_3 3692668 : 3706951 11 Escherichia_phage(25.0%) NA NA
DBSCAN-SWA_4 4547598 : 4579001 23 Cronobacter_phage(33.33%) plate,transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP026390
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 5313 : 59302 51 uncultured_Caudovirales_phage(41.18%) transposase NA
DBSCAN-SWA_2 132872 : 141511 10 uncultured_Caudovirales_phage(57.14%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP026391
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 230321 : 270103 52 Escherichia_phage(58.82%) integrase,transposase attL 241283:241296|attR 261180:261193
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. CP026389
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 36250 : 45867 11 Burkholderia_phage(42.86%) transposase,integrase attL 39400:39417|attR 46584:46601
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage