CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP026387	Leclercia sp. LSNIH3 chromosome, complete genome	0 crisprs	RT,DEDDh,cas3,DinG,PD-DExK,WYL,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	4
CP026390	Leclercia sp. LSNIH3 plasmid pLEC-5e18, complete sequence	0 crisprs	csa3,RT	2
CP026391	Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence	0 crisprs	PD-DExK,RT,csa3	1
CP026388	Leclercia sp. LSNIH3 plasmid pLEC-2975, complete sequence	0 crisprs	NA	0
CP026389	Leclercia sp. LSNIH3 plasmid pKPC-3714, complete sequence	0 crisprs	NA	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

174694 : 217095

Escherichia_phage(55.88%)

terminase,coat,holin,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUY37437.1\|174694_176740_-	peptidyl-dipeptidase Dcp	A0A1V0SIU1	Klosneuvirus	5.8e-21	21.8
AUY37438.1\|176892_177639_+	bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA	NA	NA	NA
AUY37439.1\|177730_178417_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUY37440.1\|178457_178889_-	universal stress protein UspG	A0A1W6JNV4	Morganella_phage	5.3e-17	36.6
AUY37441.1\|179153_179357_+	selenoprotein YdfZ	J9Q802	Salmonella_phage	2.6e-14	61.2
AUY37442.1\|179401_180865_-	D-mannonate oxidoreductase	H8ZJP8	Ostreococcus_tauri_virus	8.6e-43	30.1
AUY37443.1\|181146_182442_-	MFS transporter	Q6JIH2	Burkholderia_virus	1.9e-25	25.4
AUY37444.1\|182589_182904_-	hypothetical protein	K7PGV5	Enterobacterial_phage	4.3e-16	49.0
AUY37445.1\|182903_183143_-	hypothetical protein	K7P7N3	Enterobacteria_phage	4.5e-26	67.9
AUY37446.1\|184231_185230_-	hypothetical protein	O64338	Escherichia_phage	1.3e-42	49.3
AUY37447.1\|185241_185544_-	hypothetical protein	NA	NA	NA	NA
AUY37448.1\|185543_187205_-	hypothetical protein	G8GWG3	Rhodobacter_phage	3.9e-23	35.6
AUY37449.1\|187265_192263_-	hypothetical protein	G8C7R4	Escherichia_phage	9.9e-14	42.9
AUY37450.1\|192317_192917_-\|tail	phage tail protein	G8C7R3	Escherichia_phage	2.9e-98	92.5
AUY37451.1\|192904_193636_-	peptidase P60	G8C7R2	Escherichia_phage	1.1e-144	92.2
AUY37452.1\|193648_194422_-\|tail	phage minor tail protein L	G8C7R1	Escherichia_phage	2.8e-133	87.5
AUY37453.1\|194418_194769_-	hypothetical protein	G8C7R0	Escherichia_phage	3.4e-54	90.5
AUY37454.1\|195138_195582_-	hypothetical protein	NA	NA	NA	NA
AUY37455.1\|195616_198772_-\|tail	phage tail tape measure protein	G8C7Q6	Escherichia_phage	0.0e+00	63.1
AUY37456.1\|198771_199059_-	hypothetical protein	I6PD79	Cronobacter_phage	6.4e-19	64.6
AUY37457.1\|199076_199415_-	hypothetical protein	G8C7Q5	Escherichia_phage	8.3e-50	84.8
AUY37458.1\|199456_200389_-\|tail	phage tail protein	G8C7Q3	Escherichia_phage	7.4e-157	92.6
AUY37459.1\|200435_200885_-	hypothetical protein	G8C7Q2	Escherichia_phage	2.9e-74	92.6
AUY37460.1\|200874_201474_-	hypothetical protein	G8C7Q1	Escherichia_phage	1.9e-97	88.9
AUY37461.1\|201476_201830_-	hypothetical protein	G8C7Q0	Escherichia_phage	1.9e-52	90.6
AUY37462.1\|201831_202314_-	hypothetical protein	G8C7P9	Escherichia_phage	2.5e-76	84.4
AUY37463.1\|202316_202538_-	hypothetical protein	G8C7P8	Escherichia_phage	1.3e-19	71.2
AUY37464.1\|202576_203713_-\|coat	P22 coat - protein 5 family protein	G8C7P7	Escherichia_phage	4.7e-198	93.9
AUY37465.1\|203732_204485_-	hypothetical protein	G8C7P6	Escherichia_phage	4.8e-122	90.4
AUY41450.1\|204609_204990_-	hypothetical protein	G8C7P5	Escherichia_phage	4.5e-44	93.8
AUY41451.1\|205005_205890_+	hypothetical protein	NA	NA	NA	NA
AUY37466.1\|206782_208186_-	DNA-binding protein	G8C7P4	Escherichia_phage	1.2e-238	89.4
AUY37467.1\|208190_209762_-\|terminase	terminase	G8C7P3	Escherichia_phage	3.9e-307	92.5
AUY37468.1\|209758_210331_-\|terminase	terminase small subunit	I6PDJ6	Cronobacter_phage	2.3e-68	81.1
AUY41452.1\|210421_211003_+	hypothetical protein	V5URE2	Shigella_phage	9.6e-38	45.1
AUY41453.1\|211329_211503_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
AUY37469.1\|211953_212346_-	DUF2570 domain-containing protein	Q8SBD9	Shigella_phage	3.7e-25	51.9
AUY41455.1\|212342_212882_-	lysozyme	H6WRZ4	Salmonella_phage	1.1e-88	84.8
AUY41454.1\|212878_213094_-\|holin	holin	A5LH82	Enterobacteria_phage	2.8e-27	83.1
AUY37470.1\|213616_213940_-	four-helix bundle copper-binding protein	NA	NA	NA	NA
AUY37471.1\|214101_214287_-	hypothetical protein	NA	NA	NA	NA
AUY37472.1\|215571_217095_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.7e-44	31.8

DBSCAN-SWA_2

3474374 : 3481805

Mycobacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUY40331.1\|3474374_3476522_+	formate dehydrogenase subunit alpha	A0A077SK27	Escherichia_phage	2.3e-28	24.6
AUY40332.1\|3476964_3477177_+	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	1.7e-24	78.6
AUY40333.1\|3477365_3477986_-	lysine transporter LysE	NA	NA	NA	NA
AUY40334.1\|3478066_3479026_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A0M4S3B4	Mycobacterium_phage	2.4e-134	71.6
AUY40335.1\|3479035_3481180_-	ribonucleotide-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	4.2e-195	48.0
AUY40336.1\|3481152_3481563_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	2.7e-18	44.7
AUY40337.1\|3481559_3481805_-	NrdH-redoxin	A0A222ZNS6	Mycobacterium_phage	1.1e-06	42.9

DBSCAN-SWA_3

3692668 : 3706951

Escherichia_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUY40513.1\|3692668_3695413_+	DNA primase	A0A1W6JPG0	Morganella_phage	5.6e-285	55.6
AUY40514.1\|3695592_3696042_+	single-stranded DNA-binding protein	NA	NA	NA	NA
AUY40515.1\|3696054_3696531_+	proQ/FINO family protein	NA	NA	NA	NA
AUY40516.1\|3696514_3697501_+	helix-turn-helix domain containing protein	A0A1B5FPA6	Escherichia_phage	4.9e-74	52.9
AUY40517.1\|3697904_3698366_+	hypothetical protein	Q2A0B3	Sodalis_phage	1.4e-60	73.8
AUY40518.1\|3698359_3699040_+	DNA transfer protein	Q2A0B2	Sodalis_phage	1.6e-52	63.9
AUY40519.1\|3699039_3700359_+	DNA transfer protein p33	B6SCW4	Bacteriophage	1.2e-35	45.5
AUY40520.1\|3700355_3703076_+	DNA transfer protein	B9UDL1	Salmonella_phage	7.7e-162	52.8
AUY40521.1\|3703121_3703346_-	hypothetical protein	A0A0N7BYR2	Escherichia_phage	1.0e-16	54.8
AUY41576.1\|3704480_3704672_+	hypothetical protein	NA	NA	NA	NA
AUY40522.1\|3705397_3706951_+	MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.2e-161	57.6

DBSCAN-SWA_4

4547598 : 4579001

Cronobacter_phage(33.33%)

plate,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUY41246.1\|4547598_4548939_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AUY41247.1\|4548935_4549589_+	type VI secretion system protein ImpK	NA	NA	NA	NA
AUY41248.1\|4549592_4551308_+	cell envelope biogenesis protein OmpA	NA	NA	NA	NA
AUY41249.1\|4551313_4551805_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AUY41250.1\|4551965_4554605_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	4.8e-100	33.7
AUY41251.1\|4554604_4555165_+	type IV secretion protein Rhs	NA	NA	NA	NA
AUY41252.1\|4555158_4555701_+	type VI secretion protein	NA	NA	NA	NA
AUY41253.1\|4555687_4558210_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
AUY41254.1\|4558226_4560461_+	ATPase	NA	NA	NA	NA
AUY41255.1\|4560471_4561440_+	hypothetical protein	NA	NA	NA	NA
AUY41256.1\|4561478_4562411_+	hypothetical protein	NA	NA	NA	NA
AUY41257.1\|4563481_4564333_+	hypothetical protein	NA	NA	NA	NA
AUY41258.1\|4564353_4567767_+	type VI secretion protein VasK	NA	NA	NA	NA
AUY41259.1\|4567766_4569353_+	type VI secretion system protein TssA	NA	NA	NA	NA
AUY41260.1\|4569382_4571146_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AUY41261.1\|4571100_4572198_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AUY41262.1\|4572172_4572715_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AUY41263.1\|4572716_4573160_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AUY41264.1\|4573183_4574494_+	hypothetical protein	NA	NA	NA	NA
AUY41265.1\|4574631_4575111_+	hypothetical protein	NA	NA	NA	NA
AUY41266.1\|4575145_4575712_-\|protease	protease	NA	NA	NA	NA
AUY41267.1\|4575756_4576989_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-16	34.4
AUY41268.1\|4578147_4579001_-\|transposase	IS5/IS1182 family transposase	A0A0N9SHJ4	Paenibacillus_phage	6.8e-24	45.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP026390

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5313 : 59302

uncultured_Caudovirales_phage(41.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUY41719.1\|5313_6345_-\|transposase	IS630-like element ISEc33 family transposase	NA	NA	NA	NA
AUY41720.1\|6469_6913_+	peptide-methionine (R)-S-oxide reductase	NA	NA	NA	NA
AUY41721.1\|6914_7454_+	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA
AUY41722.1\|8322_11289_-\|transposase	Tn3-like element ISPa38 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.2
AUY41723.1\|11447_11738_+	nucleotidyltransferase	NA	NA	NA	NA
AUY41724.1\|11734_12136_+	DUF86 domain-containing protein	NA	NA	NA	NA
AUY41725.1\|12125_12482_+	cupin domain-containing protein	NA	NA	NA	NA
AUY41726.1\|12736_13063_+	hypothetical protein	NA	NA	NA	NA
AUY41727.1\|13059_13560_+\|transposase	transposase	NA	NA	NA	NA
AUY41728.1\|13556_13928_+	hypothetical protein	NA	NA	NA	NA
AUY41729.1\|13921_14479_+	DNA invertase	A0A0C4UR34	Shigella_phage	5.6e-59	63.2
AUY41730.1\|14515_15484_+	magnesium and cobalt transport protein CorA	NA	NA	NA	NA
AUY41731.1\|15575_16148_+	hypothetical protein	NA	NA	NA	NA
AUY41732.1\|16235_16685_+	hypothetical protein	NA	NA	NA	NA
AUY41733.1\|16791_17193_+	hypothetical protein	NA	NA	NA	NA
AUY41734.1\|17223_18495_-	MFS transporter	NA	NA	NA	NA
AUY41735.1\|18482_18995_-	hypothetical protein	NA	NA	NA	NA
AUY41736.1\|18998_19469_-	thiol-disulfide isomerase	NA	NA	NA	NA
AUY41879.1\|19620_19911_-	DUF1330 domain-containing protein	NA	NA	NA	NA
AUY41737.1\|19973_20405_-	heme-binding protein	NA	NA	NA	NA
AUY41738.1\|20478_21489_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
AUY41739.1\|22482_25380_-\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	4.2e-182	37.8
AUY41740.1\|25474_26080_+	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
AUY41741.1\|26127_26907_+	conjugal transfer protein TraO	NA	NA	NA	NA
AUY41742.1\|26906_28067_+	conjugal transfer protein TraF	NA	NA	NA	NA
AUY41743.1\|28108_29104_+	conjugal transfer protein TraG	NA	NA	NA	NA
AUY41744.1\|29103_29637_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	5.8e-21	33.9
AUY41745.1\|30364_30697_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AUY41746.1\|30693_31416_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.5e-96	73.0
AUY41747.1\|31473_31902_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-52	70.7
AUY41748.1\|31951_33235_-	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	2.9e-175	74.6
AUY41749.1\|33330_33684_-	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	5.9e-22	57.1
AUY41750.1\|34167_35646_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	1.6e-198	74.0
AUY41751.1\|35664_36492_+	universal stress protein	NA	NA	NA	NA
AUY41752.1\|36563_37760_-	MFS transporter	NA	NA	NA	NA
AUY41753.1\|38288_38663_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	4.5e-28	56.0
AUY41754.1\|38937_40086_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.7e-123	65.9
AUY41755.1\|40723_41428_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUY41756.1\|41373_41685_-	hypothetical protein	NA	NA	NA	NA
AUY41757.1\|41681_44087_-	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.9e-140	45.8
AUY41758.1\|44172_44613_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
AUY41759.1\|44657_45146_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUY41760.1\|45221_45881_-	heavy metal RND transporter permease	S5VTK5	Leptospira_phage	8.2e-09	25.0
AUY41761.1\|46083_46497_-	hypothetical protein	NA	NA	NA	NA
AUY41762.1\|47155_47575_+	hypothetical protein	NA	NA	NA	NA
AUY41763.1\|48346_48745_+	DNA-binding protein	NA	NA	NA	NA
AUY41764.1\|49793_50105_+	cytoplasmic protein	NA	NA	NA	NA
AUY41765.1\|50101_50521_+	transcriptional regulator	NA	NA	NA	NA
AUY41766.1\|51762_53286_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.7e-44	31.8
AUY41767.1\|53579_54017_+	hypothetical protein	NA	NA	NA	NA
AUY41880.1\|58094_59302_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	5.7e-101	62.9

DBSCAN-SWA_2

132872 : 141511

uncultured_Caudovirales_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUY41824.1\|132872_133451_+	resolvase	A0A219YA40	Aeromonas_phage	1.3e-21	33.9
AUY41825.1\|133626_134832_+	chromate transporter	NA	NA	NA	NA
AUY41826.1\|134842_135148_+	PadR family transcriptional regulator	NA	NA	NA	NA
AUY41827.1\|135276_135975_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	4.5e-90	69.4
AUY41828.1\|136060_136381_+	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	2.9e-20	44.8
AUY41882.1\|136425_137715_+	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.2e-168	71.6
AUY41829.1\|137727_138153_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.9e-51	72.1
AUY41830.1\|138783_139218_-	copper-binding protein	NA	NA	NA	NA
AUY41831.1\|139433_140834_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	5.4e-18	26.6
AUY41832.1\|140830_141511_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	8.7e-30	34.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP026391

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

230321 : 270103

Escherichia_phage(58.82%)

integrase,transposase

attL 241283:241296|attR 261180:261193

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUY42218.1\|230321_231668_+\|transposase	transposase	NA	NA	NA	NA
AUY42099.1\|231726_232518_+	tetratricopeptide repeat protein	NA	NA	NA	NA
AUY42100.1\|232558_233395_-	hypothetical protein	NA	NA	NA	NA
AUY42101.1\|233451_234015_-	hypothetical protein	NA	NA	NA	NA
AUY42102.1\|234381_234675_-	hypothetical protein	NA	NA	NA	NA
AUY42103.1\|234695_234995_-	hypothetical protein	NA	NA	NA	NA
AUY42104.1\|235058_235289_-	hypothetical protein	NA	NA	NA	NA
AUY42105.1\|235310_236258_-	hypothetical protein	NA	NA	NA	NA
AUY42106.1\|236254_236770_-	nuclease	V5UN65	Mycobacterium_phage	3.2e-08	28.9
AUY42107.1\|236992_238420_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	9.5e-103	49.4
AUY42108.1\|238545_238716_+	hypothetical protein	A0A1P7WFU2	Pectobacterium_phage	2.3e-08	56.4
AUY42109.1\|238739_240059_+	DUF1173 domain-containing protein	NA	NA	NA	NA
AUY42110.1\|240072_240276_+	hypothetical protein	NA	NA	NA	NA
AUY42111.1\|240330_241551_-	hypothetical protein	NA	NA	NA	NA
241283:241296	attL	NA	NA	NA	NA
AUY42112.1\|241553_242366_-	DUF4942 domain-containing protein	NA	NA	NA	NA
AUY42219.1\|242866_243532_+	hypothetical protein	NA	NA	NA	NA
AUY42113.1\|243569_244022_+	hypothetical protein	NA	NA	NA	NA
AUY42114.1\|244597_245053_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
AUY42115.1\|245124_245520_+	mercuric ion transporter MerT	NA	NA	NA	NA
AUY42116.1\|245535_245811_+	mercuric transporter periplasmic component	NA	NA	NA	NA
AUY42117.1\|245838_246264_+	mercury transport protein MerC	NA	NA	NA	NA
AUY42118.1\|246302_247988_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
AUY42119.1\|248005_248371_+	transcriptional regulator	NA	NA	NA	NA
AUY42120.1\|248367_248604_+	mercury resistance protein	NA	NA	NA	NA
AUY42220.1\|248587_248707_-	mercury resistance protein	NA	NA	NA	NA
AUY42121.1\|248669_248882_+	DUF3330 domain-containing protein	NA	NA	NA	NA
AUY42122.1\|248901_249078_-	resolvase	NA	NA	NA	NA
AUY42123.1\|249119_249884_-\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AUY42124.1\|249971_250085_+	NTP-binding protein	NA	NA	NA	NA
AUY42125.1\|250390_250891_-	N-acetyltransferase	NA	NA	NA	NA
AUY42126.1\|250909_251089_+	hypothetical protein	NA	NA	NA	NA
AUY42127.1\|251018_251858_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AUY42128.1\|252057_252714_-	quinolone resistance pentapeptide repeat protein QnrA1	NA	NA	NA	NA
AUY42129.1\|253046_254588_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AUY42130.1\|254992_255832_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AUY42131.1\|255825_256173_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AUY42132.1\|256336_257128_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
AUY42133.1\|257219_257525_-	hypothetical protein	NA	NA	NA	NA
AUY42134.1\|257540_258053_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AUY42135.1\|258171_258636_-	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	NA	NA	NA	NA
AUY42221.1\|258711_259266_-	aminoglycoside N-acetyltransferase AAC(6')-Ib3	NA	NA	NA	NA
AUY42136.1\|259426_260440_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	6.1e-72	45.5
AUY42137.1\|260378_260636_+	hypothetical protein	NA	NA	NA	NA
AUY42138.1\|260581_261286_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
261180:261193	attR	NA	NA	NA	NA
AUY42139.1\|262258_263347_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
AUY42140.1\|263433_263694_-	hypothetical protein	A0A077SK33	Escherichia_phage	1.9e-41	100.0
AUY42141.1\|263991_264852_+	class A extended-spectrum beta-lactamase SHV-5	A0A077SL40	Escherichia_phage	4.4e-156	99.7
AUY42142.1\|264872_265634_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AUY42143.1\|265894_266797_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.3e-160	100.0
AUY42144.1\|266808_268074_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	4.6e-234	99.8
AUY42145.1\|268066_268687_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
AUY42146.1\|269398_270103_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP026389

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

36250 : 45867

Burkholderia_phage(42.86%)

transposase,integrase

attL 39400:39417|attR 46584:46601

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUY41690.1\|36250_36970_+	RepB family plasmid replication initiator protein	I3WF20	Macacine_betaherpesvirus	8.6e-20	28.9
AUY41691.1\|37576_38575_+	hypothetical protein	NA	NA	NA	NA
AUY41692.1\|38926_39496_-	recombinase family protein	E5FFF9	Burkholderia_phage	5.2e-36	43.2
39400:39417	attL	NA	NA	NA	NA
AUY41693.1\|39635_39950_-\|transposase	transposase	NA	NA	NA	NA
AUY41694.1\|39888_40902_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AUY41695.1\|41048_41531_+	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	6.6e-16	28.9
AUY41696.1\|41751_42018_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
AUY41697.1\|42160_42925_+\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AUY41698.1\|42966_43179_+	resolvase	NA	NA	NA	NA
AUY41699.1\|43191_44400_+	restriction endonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
AUY41700.1\|44433_45867_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
46584:46601	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP026387

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP026390

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP026391

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. CP026389

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection