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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP014120 Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 0 0
CP014117 Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed3, complete sequence 0 crisprs NA 0 0 0 0
CP014119 Staphylococcus epidermidis strain FDAARGOS_153 chromosome, complete genome 0 crisprs csa3,WYL,cas6,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas2,cas1,cas3,DEDDh,DinG 0 0 198 0
CP014116 Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed4 0 crisprs NA 0 0 0 0
CP014118 Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. CP014119
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 2667 4 uncultured_Caudovirales_phage(50.0%) integrase attL 1079:1092|attR 2988:3001
DBSCAN-SWA_2 11473 : 12214 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_3 20881 : 23969 4 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_4 31987 : 36531 4 Planktothrix_phage(50.0%) protease NA
DBSCAN-SWA_5 49926 : 53597 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_6 66851 : 67481 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_7 75767 : 80819 5 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_8 87712 : 98202 9 Bacillus_virus(40.0%) NA NA
DBSCAN-SWA_9 109038 : 110609 2 Salmonella_phage(50.0%) NA NA
DBSCAN-SWA_10 114466 : 115618 1 Streptococcus_pyogenes_phage(100.0%) transposase NA
DBSCAN-SWA_11 121374 : 123822 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_12 128261 : 130221 2 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_13 136628 : 142449 6 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_14 145685 : 150683 3 Bodo_saltans_virus(33.33%) tRNA NA
DBSCAN-SWA_15 154392 : 159056 4 Micromonas_sp._RCC1109_virus(100.0%) NA NA
DBSCAN-SWA_16 172538 : 175893 5 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_17 180485 : 182015 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_18 189084 : 189738 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_19 195063 : 195459 1 Listeria_phage(100.0%) NA NA
DBSCAN-SWA_20 205642 : 213488 10 Catovirus(25.0%) NA NA
DBSCAN-SWA_21 221070 : 222678 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_22 231455 : 234939 4 Geobacillus_virus(50.0%) NA NA
DBSCAN-SWA_23 240299 : 241271 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_24 245203 : 247009 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_25 267172 : 268138 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_26 290957 : 296339 7 Orpheovirus(33.33%) tRNA NA
DBSCAN-SWA_27 311399 : 312734 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_28 319029 : 322185 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_29 334361 : 334982 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_30 358919 : 362297 3 Catovirus(50.0%) NA NA
DBSCAN-SWA_31 374666 : 375866 1 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_32 380069 : 380951 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_33 404683 : 405895 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_34 409440 : 411967 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_35 421157 : 423323 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_36 445326 : 446880 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_37 464049 : 464781 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_38 471033 : 472188 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_39 480118 : 481636 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_40 485935 : 487711 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_41 492223 : 495022 2 Mycoplasma_phage(50.0%) NA NA
DBSCAN-SWA_42 501141 : 501813 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_43 507062 : 507881 1 Acanthamoeba_polyphaga_mimivirus(100.0%) NA NA
DBSCAN-SWA_44 513465 : 523224 7 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_45 555651 : 556644 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_46 560218 : 561418 1 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_47 575754 : 584331 8 Acanthamoeba_polyphaga_mimivirus(25.0%) transposase,protease NA
DBSCAN-SWA_48 592752 : 593271 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_49 598981 : 610163 10 Trichoplusia_ni_ascovirus(20.0%) NA NA
DBSCAN-SWA_50 623359 : 624178 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_51 632852 : 634190 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_52 639240 : 640131 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_53 644109 : 664932 16 Vibrio_phage(25.0%) holin NA
DBSCAN-SWA_54 671242 : 671974 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_55 679439 : 681032 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_56 684262 : 685012 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_57 693563 : 694901 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_58 699701 : 706823 7 Streptococcus_phage(66.67%) NA NA
DBSCAN-SWA_59 714656 : 723446 8 uncultured_Caudovirales_phage(50.0%) transposase NA
DBSCAN-SWA_60 747612 : 749580 1 Clostridium_phage(100.0%) NA NA
DBSCAN-SWA_61 779108 : 779882 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_62 786476 : 787676 1 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_63 791521 : 792157 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_64 807630 : 809223 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_65 812984 : 815389 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_66 826707 : 833910 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_67 845550 : 845979 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_68 853183 : 855003 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_69 862469 : 868216 4 Tetraselmis_virus(33.33%) NA NA
DBSCAN-SWA_70 875259 : 881441 4 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_71 901159 : 902293 1 Emiliania_huxleyi_virus(100.0%) NA NA
DBSCAN-SWA_72 911552 : 916011 4 Staphylococcus_phage(50.0%) protease NA
DBSCAN-SWA_73 920793 : 921561 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_74 937262 : 939283 3 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_75 943951 : 947723 2 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_76 952398 : 956503 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_77 976771 : 981395 3 Liberibacter_phage(50.0%) NA NA
DBSCAN-SWA_78 997160 : 1003805 4 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_79 1009247 : 1015093 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_80 1032814 : 1035814 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_81 1049774 : 1059877 8 Bacillus_phage(40.0%) NA NA
DBSCAN-SWA_82 1066300 : 1075823 5 Bacillus_virus(50.0%) tRNA NA
DBSCAN-SWA_83 1086031 : 1092192 9 Gordonia_phage(33.33%) NA NA
DBSCAN-SWA_84 1099252 : 1100011 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_85 1115077 : 1115920 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_86 1124415 : 1133145 10 Pandoravirus(40.0%) NA NA
DBSCAN-SWA_87 1138249 : 1139773 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_88 1149004 : 1155138 7 Staphylococcus_phage(50.0%) integrase,protease attL 1140876:1140891|attR 1155441:1155456
DBSCAN-SWA_89 1160729 : 1160993 1 Staphylococcus_virus(100.0%) NA NA
DBSCAN-SWA_90 1171424 : 1177793 6 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_91 1194164 : 1195871 1 Streptococcus_virus(100.0%) NA NA
DBSCAN-SWA_92 1204958 : 1212417 9 Streptococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_93 1218680 : 1221145 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_94 1231778 : 1240859 8 uncultured_virus(20.0%) tRNA NA
DBSCAN-SWA_95 1252700 : 1257218 4 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_96 1260919 : 1263373 1 Escherichia_phage(100.0%) protease NA
DBSCAN-SWA_97 1269199 : 1273988 8 Catovirus(50.0%) tRNA NA
DBSCAN-SWA_98 1277846 : 1288987 6 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_99 1293019 : 1293970 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_100 1304361 : 1305024 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_101 1313784 : 1318572 7 Staphylococcus_phage(66.67%) transposase NA
DBSCAN-SWA_102 1328109 : 1328760 1 Elephant_endotheliotropic_herpesvirus(100.0%) NA NA
DBSCAN-SWA_103 1340845 : 1342213 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_104 1348938 : 1351928 3 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_105 1356956 : 1360249 4 Tupanvirus(50.0%) transposase NA
DBSCAN-SWA_106 1370270 : 1371047 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_107 1394571 : 1405162 10 Streptomyces_phage(20.0%) NA NA
DBSCAN-SWA_108 1409132 : 1409894 1 Cedratvirus(100.0%) NA NA
DBSCAN-SWA_109 1419879 : 1420356 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_110 1429388 : 1429955 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_111 1433064 : 1436450 2 Organic_Lake_phycodnavirus(50.0%) NA NA
DBSCAN-SWA_112 1441553 : 1442927 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_113 1454031 : 1464567 14 Staphylococcus_phage(12.5%) NA NA
DBSCAN-SWA_114 1467725 : 1481338 10 Streptococcus_phage(28.57%) transposase NA
DBSCAN-SWA_115 1485990 : 1496424 10 uncultured_Caudovirales_phage(66.67%) NA NA
DBSCAN-SWA_116 1507857 : 1510916 3 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_117 1517064 : 1517865 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_118 1521603 : 1524438 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_119 1528573 : 1533570 5 Streptococcus_phage(40.0%) protease NA
DBSCAN-SWA_120 1543212 : 1553043 10 Staphylococcus_phage(40.0%) NA NA
DBSCAN-SWA_121 1558458 : 1562964 6 Indivirus(33.33%) NA NA
DBSCAN-SWA_122 1567763 : 1575343 11 Streptococcus_phage(75.0%) transposase NA
DBSCAN-SWA_123 1578905 : 1582378 3 Brazilian_cedratvirus(50.0%) NA NA
DBSCAN-SWA_124 1587149 : 1587998 1 Golden_Marseillevirus(100.0%) NA NA
DBSCAN-SWA_125 1595059 : 1597728 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_126 1601989 : 1605628 3 Lake_Baikal_phage(50.0%) NA NA
DBSCAN-SWA_127 1615448 : 1616042 1 Aureococcus_anophage(100.0%) NA NA
DBSCAN-SWA_128 1619218 : 1624705 4 Streptococcus_phage(33.33%) transposase NA
DBSCAN-SWA_129 1634712 : 1638387 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_130 1643474 : 1648116 2 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_131 1653662 : 1655673 2 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_132 1659368 : 1664648 4 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_133 1674583 : 1679160 6 Streptococcus_phage(20.0%) NA NA
DBSCAN-SWA_134 1690119 : 1694765 3 Streptococcus_phage(33.33%) protease NA
DBSCAN-SWA_135 1705045 : 1705261 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_136 1715631 : 1719639 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_137 1723438 : 1724641 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_138 1731113 : 1745745 14 Synechococcus_phage(22.22%) NA NA
DBSCAN-SWA_139 1750927 : 1752100 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_140 1761950 : 1762502 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_141 1767011 : 1770782 4 Erysipelothrix_phage(50.0%) NA NA
DBSCAN-SWA_142 1779668 : 1785320 3 Streptococcus_phage(66.67%) transposase NA
DBSCAN-SWA_143 1797359 : 1800253 6 Enterococcus_phage(50.0%) NA NA
DBSCAN-SWA_144 1807131 : 1808190 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_145 1812693 : 1817334 3 Bodo_saltans_virus(33.33%) NA NA
DBSCAN-SWA_146 1823938 : 1824526 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_147 1846461 : 1849212 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_148 1853797 : 1858408 4 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_149 1862301 : 1862913 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_150 1866118 : 1873049 7 Abalone_herpesvirus(25.0%) tRNA NA
DBSCAN-SWA_151 1876196 : 1878200 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_152 1888215 : 1890263 3 Trichoplusia_ni_ascovirus(33.33%) NA NA
DBSCAN-SWA_153 1906242 : 1907013 1 Emiliania_huxleyi_virus(100.0%) NA NA
DBSCAN-SWA_154 1911077 : 1917612 5 Indivirus(33.33%) tRNA,protease NA
DBSCAN-SWA_155 1922240 : 1923011 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_156 1927288 : 1938970 9 Streptococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_157 1943902 : 1949603 4 Mycobacterium_phage(33.33%) NA NA
DBSCAN-SWA_158 1954068 : 1955118 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_159 1961490 : 1962108 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_160 1965424 : 1969998 2 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_161 1977821 : 1978298 1 Fowlpox_virus(100.0%) NA NA
DBSCAN-SWA_162 1983371 : 1986253 5 Staphylococcus_phage(66.67%) head NA
DBSCAN-SWA_163 1989557 : 1993921 6 Anomala_cuprea_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_164 2004869 : 2010200 7 Tupanvirus(25.0%) NA NA
DBSCAN-SWA_165 2014434 : 2015559 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_166 2019271 : 2020912 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_167 2026020 : 2030420 2 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_168 2039974 : 2041237 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_169 2044458 : 2046023 2 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_170 2055033 : 2062515 8 Anomala_cuprea_entomopoxvirus(25.0%) NA NA
DBSCAN-SWA_171 2067340 : 2068948 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_172 2076557 : 2083855 9 Yellowstone_lake_phycodnavirus(25.0%) NA NA
DBSCAN-SWA_173 2087362 : 2088154 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_174 2095766 : 2096426 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_175 2103503 : 2117815 19 Staphylococcus_phage(37.5%) protease NA
DBSCAN-SWA_176 2156427 : 2158308 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_177 2161711 : 2168797 5 Temperate_phage(25.0%) tRNA NA
DBSCAN-SWA_178 2177668 : 2181257 5 Anguillid_herpesvirus(33.33%) NA NA
DBSCAN-SWA_179 2190198 : 2202717 15 Bacillus_phage(42.86%) NA NA
DBSCAN-SWA_180 2206067 : 2207552 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_181 2210721 : 2212128 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_182 2218662 : 2229289 11 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_183 2237288 : 2240136 2 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_184 2245668 : 2246292 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_185 2252727 : 2266786 13 Bacillus_thuringiensis_phage(14.29%) tRNA NA
DBSCAN-SWA_186 2269814 : 2270762 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_187 2277655 : 2280751 2 Catovirus(50.0%) NA NA
DBSCAN-SWA_188 2283787 : 2289973 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_189 2302724 : 2339662 31 uncultured_Mediterranean_phage(23.53%) tRNA,transposase,protease NA
DBSCAN-SWA_190 2348977 : 2351608 1 Catovirus(100.0%) tRNA NA
DBSCAN-SWA_191 2361164 : 2372657 10 Bacillus_virus(20.0%) tRNA,protease NA
DBSCAN-SWA_192 2377513 : 2385318 5 Bacillus_virus(20.0%) NA NA
DBSCAN-SWA_193 2388568 : 2390326 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_194 2394928 : 2398126 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_195 2415753 : 2419893 4 Only_Syngen_Nebraska_virus(50.0%) NA NA
DBSCAN-SWA_196 2423777 : 2426472 2 uncultured_Mediterranean_phage(50.0%) tRNA,protease NA
DBSCAN-SWA_197 2435929 : 2440933 3 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_198 2450510 : 2497451 37 Staphylococcus_phage(90.0%) tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage