CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP026615	Clostridioides difficile strain R3 chromosome, complete genome	9 crisprs	cas14j,WYL,csa3,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,DEDDh,cas8b1,cas7b,cas14k,RT,DinG	2	94	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP026615_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026615_1

780487-782608

Unclear

I-A

Consensus_repeat	Method
GTTTTATATTAACTAAGTGGTATGTAAAG	PILER-CR
GTTTTATATTAACTAAGTGGTATGTAAAG	CRISPRCasFinder
GTTTTATATTAACTAAGTGGTATGTAAAG	CRT

32 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL

The CRISPR arrays of CP026615_1

>merge|CP026615|1|780487-782608|PILER-CR,CRISPRCasFinder,CRT
GTTTTATATTAACTAAGTGGTATGTAAAGCAATATATTCTAGCAGGAGCAGATTTAGGAGCTTTACAAGTTTTATATTAACTAAGTGGTATGTAAAGATTCTTTATACAGAGAAACACGATACTATTTACAGGTTTTATATTAACTAAGTGGTATGTAAAGATATCTTTGTACTCTTGATTTTCCAGCTTTGATATAGTTTTATATTAACTAAGTGGTATGTAAAGAATTGCATAATATTAGAGAGTTTAATACCATCAAGTGTTTTATATTAACTAAGTGGTATGTAAAGGATGGTAAAATGGGAGATACTTTCTTTGGATTAACAGGTTTTATATTAACTAAGTGGTATGTAAAGTTGCTTATACTTACAACTTTTTCTGCTGTAGCATGTTTTATATTAACTAAGTGGTATGTAAAGAAAACTGTTTCTACTTTTTTAGTCCCAAGTAATTCCGTTTTATATTAACTAAGTGGTATGTAAAGCGCATTTTTGCTTTTATATTGCTTCTTCTATCTTCTAGTTTTATATTAACTAAGTGGTATGTAAAGTCTAAAATATCCTCACAACTCCTGTAATTGTATTTTCTGTTTTATATTAACTAAGTGGTATGTAAAGTGGTTTACTAAGAAAATAACGGATTTTTAAGAGAAAAGTTTTATATTAACTAAGTGGTATGTAAAGTTTGATGAAAAAGAAGAATATAAGAGGGATGTGGCAAGTTTTATATTAACTAAGTGGTATGTAAAGTAACTCCAAACTCCGTAAGTCTTGCCATTTCTCCAAGTTTTATATTAACTAAGTGGTATGTAAAGGAGTATCAAGAGACCAGGGAAAGGCAGGTAAAGCAGGTTTTATATTAACTAAGTGGTATGTAAAGAATGGTAAAATGAAGGCATAATAAATTTCAATATAGGTTTTATATTAACTAAGTGGTATGTAAAGAGAGACAGTTTAAAACTAAATCAGAAGAAAAGTCTTATAGTTTTATATTAACTAAGTGGTATGTAAAGTTTAAAGCACCCTTAAAATCTGGTTGGGCATGTTCTCGTTTTATATTAACTAAGTGGTATGTAAAGTTGGTAGACAACCTGGTACTTGGCTTAAGATTGATAAGTTTTATATTAACTAAGTGGTATGTAAAGCATGTGATAGAGATAATATACAATATGATAGAGAAAGTTTTATATTAACTAAGTGGTATGTAAAGGCATAAAATACCTTCAAAAATAGCTTCTACTGACAGTTTTATATTAACTAAGTGGTATGTAAAGCGAAATAATGTTTTGTTTTCGATGGGTATATATACGGGTTTTATATTAACTAAGTGGTATGTAAAGTAGCTTTTGCGACTGGAAGATACGCAGATAATTTAGTTTTATATTAACTAAGTGGTATGTAAAGATTGTAAGCTCTTTAATTTCTAAATTAGCTCCGATTGTTTTATATTAACTAAGTGGTATGTAAAGTTAAGTAGAGCAATGTATCATGGTTATGTGAAAAGTGTTTTATATTAACTAAGTGGTATGTAAAGCTAGTAAATTTTGCTAAAAGGCACTATTATTGTAGTGTTTTATATTAACTAAGTGGTATGTAAAGCAGTTGACACAATGAGTAAAAGCGAAGCAGAGCAAGATTTTATATTAACTAAGTGGTATGTAAAGTTATGTTATAGGAGCAGGTTGCAAGAAGTATAAGCAAGTTTTATATTAACTAAGTGGTATGTAAAGCATAGATTTTGGAGATTTAAGGGAAGGCAATATGTGTGTTTTATATTAACTAAGTGGTATGTAAAGGGGTTTGCATCTTTATTAGATAATTTTATTAATAGAGTTTTATATTAACTAAGTGGTATGTAAAGTAAATATAGAATAAAGCATTTTAGTTTACAATGCAAGTTTTATATTAACTAAGTGGTATGTAAAGACCTAAAAAATCAATGCAGCTTATCTTATATGCAATGGTTTTATATTAACTAAGTGGTATGTAAAGATTAAGGAATAGTAATTACAGTGGACTGGAGTTAGTGTTTTATATTAACTAAGTGGTATGTAAAGACGTTTCGCAAGGGATTTTTTAAAGCGAATGGATAAGTTTTATATTAACTAAATCATATCTAAAT

>CP026615|1|1|780487-782543|PILER-CR
GTTTTATATTAACTAAGTGGTATGTAAAG	CAATATATTCTAGCAGGAGCAGATTTAGGAGCTTTACAA
GTTTTATATTAACTAAGTGGTATGTAAAG	ATTCTTTATACAGAGAAACACGATACTATTTACAG
GTTTTATATTAACTAAGTGGTATGTAAAG	ATATCTTTGTACTCTTGATTTTCCAGCTTTGATATA
GTTTTATATTAACTAAGTGGTATGTAAAG	AATTGCATAATATTAGAGAGTTTAATACCATCAAGT
GTTTTATATTAACTAAGTGGTATGTAAAG	GATGGTAAAATGGGAGATACTTTCTTTGGATTAACAG
GTTTTATATTAACTAAGTGGTATGTAAAG	TTGCTTATACTTACAACTTTTTCTGCTGTAGCAT
GTTTTATATTAACTAAGTGGTATGTAAAG	AAAACTGTTTCTACTTTTTTAGTCCCAAGTAATTCC
GTTTTATATTAACTAAGTGGTATGTAAAG	CGCATTTTTGCTTTTATATTGCTTCTTCTATCTTCTA
GTTTTATATTAACTAAGTGGTATGTAAAG	TCTAAAATATCCTCACAACTCCTGTAATTGTATTTTCT
GTTTTATATTAACTAAGTGGTATGTAAAG	TGGTTTACTAAGAAAATAACGGATTTTTAAGAGAAAA
GTTTTATATTAACTAAGTGGTATGTAAAG	TTTGATGAAAAAGAAGAATATAAGAGGGATGTGGCAA
GTTTTATATTAACTAAGTGGTATGTAAAG	TAACTCCAAACTCCGTAAGTCTTGCCATTTCTCCAA
GTTTTATATTAACTAAGTGGTATGTAAAG	GAGTATCAAGAGACCAGGGAAAGGCAGGTAAAGCAG
GTTTTATATTAACTAAGTGGTATGTAAAG	AATGGTAAAATGAAGGCATAATAAATTTCAATATAG
GTTTTATATTAACTAAGTGGTATGTAAAG	AGAGACAGTTTAAAACTAAATCAGAAGAAAAGTCTTATA
GTTTTATATTAACTAAGTGGTATGTAAAG	TTTAAAGCACCCTTAAAATCTGGTTGGGCATGTTCTC
GTTTTATATTAACTAAGTGGTATGTAAAG	TTGGTAGACAACCTGGTACTTGGCTTAAGATTGATAA
GTTTTATATTAACTAAGTGGTATGTAAAG	CATGTGATAGAGATAATATACAATATGATAGAGAAA
GTTTTATATTAACTAAGTGGTATGTAAAG	GCATAAAATACCTTCAAAAATAGCTTCTACTGACA
GTTTTATATTAACTAAGTGGTATGTAAAG	CGAAATAATGTTTTGTTTTCGATGGGTATATATACGG
GTTTTATATTAACTAAGTGGTATGTAAAG	TAGCTTTTGCGACTGGAAGATACGCAGATAATTTA
GTTTTATATTAACTAAGTGGTATGTAAAG	ATTGTAAGCTCTTTAATTTCTAAATTAGCTCCGATT
GTTTTATATTAACTAAGTGGTATGTAAAG	TTAAGTAGAGCAATGTATCATGGTTATGTGAAAAGT
GTTTTATATTAACTAAGTGGTATGTAAAG	CTAGTAAATTTTGCTAAAAGGCACTATTATTGTAGT
GTTTTATATTAACTAAGTGGTATGTAAAG	CAGTTGACACAATGAGTAAAAGCGAAGCAGAGCAAG
ATTTTATATTAACTAAGTGGTATGTAAAG	TTATGTTATAGGAGCAGGTTGCAAGAAGTATAAGCAA
GTTTTATATTAACTAAGTGGTATGTAAAG	CATAGATTTTGGAGATTTAAGGGAAGGCAATATGTGT
GTTTTATATTAACTAAGTGGTATGTAAAG	GGGTTTGCATCTTTATTAGATAATTTTATTAATAGA
GTTTTATATTAACTAAGTGGTATGTAAAG	TAAATATAGAATAAAGCATTTTAGTTTACAATGCAA
GTTTTATATTAACTAAGTGGTATGTAAAG	ACCTAAAAAATCAATGCAGCTTATCTTATATGCAATG
GTTTTATATTAACTAAGTGGTATGTAAAG	ATTAAGGAATAGTAATTACAGTGGACTGGAGTTAGT
GTTTTATATTAACTAAGTGGTATGTAAAG

>CP026615|1|1|780487-782608|CRISPRCasFinder
GTTTTATATTAACTAAGTGGTATGTAAAG	CAATATATTCTAGCAGGAGCAGATTTAGGAGCTTTACAA
GTTTTATATTAACTAAGTGGTATGTAAAG	ATTCTTTATACAGAGAAACACGATACTATTTACAG
GTTTTATATTAACTAAGTGGTATGTAAAG	ATATCTTTGTACTCTTGATTTTCCAGCTTTGATATA
GTTTTATATTAACTAAGTGGTATGTAAAG	AATTGCATAATATTAGAGAGTTTAATACCATCAAGT
GTTTTATATTAACTAAGTGGTATGTAAAG	GATGGTAAAATGGGAGATACTTTCTTTGGATTAACAG
GTTTTATATTAACTAAGTGGTATGTAAAG	TTGCTTATACTTACAACTTTTTCTGCTGTAGCAT
GTTTTATATTAACTAAGTGGTATGTAAAG	AAAACTGTTTCTACTTTTTTAGTCCCAAGTAATTCC
GTTTTATATTAACTAAGTGGTATGTAAAG	CGCATTTTTGCTTTTATATTGCTTCTTCTATCTTCTA
GTTTTATATTAACTAAGTGGTATGTAAAG	TCTAAAATATCCTCACAACTCCTGTAATTGTATTTTCT
GTTTTATATTAACTAAGTGGTATGTAAAG	TGGTTTACTAAGAAAATAACGGATTTTTAAGAGAAAA
GTTTTATATTAACTAAGTGGTATGTAAAG	TTTGATGAAAAAGAAGAATATAAGAGGGATGTGGCAA
GTTTTATATTAACTAAGTGGTATGTAAAG	TAACTCCAAACTCCGTAAGTCTTGCCATTTCTCCAA
GTTTTATATTAACTAAGTGGTATGTAAAG	GAGTATCAAGAGACCAGGGAAAGGCAGGTAAAGCAG
GTTTTATATTAACTAAGTGGTATGTAAAG	AATGGTAAAATGAAGGCATAATAAATTTCAATATAG
GTTTTATATTAACTAAGTGGTATGTAAAG	AGAGACAGTTTAAAACTAAATCAGAAGAAAAGTCTTATA
GTTTTATATTAACTAAGTGGTATGTAAAG	TTTAAAGCACCCTTAAAATCTGGTTGGGCATGTTCTC
GTTTTATATTAACTAAGTGGTATGTAAAG	TTGGTAGACAACCTGGTACTTGGCTTAAGATTGATAA
GTTTTATATTAACTAAGTGGTATGTAAAG	CATGTGATAGAGATAATATACAATATGATAGAGAAA
GTTTTATATTAACTAAGTGGTATGTAAAG	GCATAAAATACCTTCAAAAATAGCTTCTACTGACA
GTTTTATATTAACTAAGTGGTATGTAAAG	CGAAATAATGTTTTGTTTTCGATGGGTATATATACGG
GTTTTATATTAACTAAGTGGTATGTAAAG	TAGCTTTTGCGACTGGAAGATACGCAGATAATTTA
GTTTTATATTAACTAAGTGGTATGTAAAG	ATTGTAAGCTCTTTAATTTCTAAATTAGCTCCGATT
GTTTTATATTAACTAAGTGGTATGTAAAG	TTAAGTAGAGCAATGTATCATGGTTATGTGAAAAGT
GTTTTATATTAACTAAGTGGTATGTAAAG	CTAGTAAATTTTGCTAAAAGGCACTATTATTGTAGT
GTTTTATATTAACTAAGTGGTATGTAAAG	CAGTTGACACAATGAGTAAAAGCGAAGCAGAGCAAG
ATTTTATATTAACTAAGTGGTATGTAAAG	TTATGTTATAGGAGCAGGTTGCAAGAAGTATAAGCAA
GTTTTATATTAACTAAGTGGTATGTAAAG	CATAGATTTTGGAGATTTAAGGGAAGGCAATATGTGT
GTTTTATATTAACTAAGTGGTATGTAAAG	GGGTTTGCATCTTTATTAGATAATTTTATTAATAGA
GTTTTATATTAACTAAGTGGTATGTAAAG	TAAATATAGAATAAAGCATTTTAGTTTACAATGCAA
GTTTTATATTAACTAAGTGGTATGTAAAG	ACCTAAAAAATCAATGCAGCTTATCTTATATGCAATG
GTTTTATATTAACTAAGTGGTATGTAAAG	ATTAAGGAATAGTAATTACAGTGGACTGGAGTTAGT
GTTTTATATTAACTAAGTGGTATGTAAAG	ACGTTTCGCAAGGGATTTTTTAAAGCGAATGGATAA
GTTTTATATTAACTAAATCATATCTAAAT

>CP026615|1|1|780487-782608|CRT
GTTTTATATTAACTAAGTGGTATGTAAAG	CAATATATTCTAGCAGGAGCAGATTTAGGAGCTTTACAA
GTTTTATATTAACTAAGTGGTATGTAAAG	ATTCTTTATACAGAGAAACACGATACTATTTACAG
GTTTTATATTAACTAAGTGGTATGTAAAG	ATATCTTTGTACTCTTGATTTTCCAGCTTTGATATA
GTTTTATATTAACTAAGTGGTATGTAAAG	AATTGCATAATATTAGAGAGTTTAATACCATCAAGT
GTTTTATATTAACTAAGTGGTATGTAAAG	GATGGTAAAATGGGAGATACTTTCTTTGGATTAACAG
GTTTTATATTAACTAAGTGGTATGTAAAG	TTGCTTATACTTACAACTTTTTCTGCTGTAGCAT
GTTTTATATTAACTAAGTGGTATGTAAAG	AAAACTGTTTCTACTTTTTTAGTCCCAAGTAATTCC
GTTTTATATTAACTAAGTGGTATGTAAAG	CGCATTTTTGCTTTTATATTGCTTCTTCTATCTTCTA
GTTTTATATTAACTAAGTGGTATGTAAAG	TCTAAAATATCCTCACAACTCCTGTAATTGTATTTTCT
GTTTTATATTAACTAAGTGGTATGTAAAG	TGGTTTACTAAGAAAATAACGGATTTTTAAGAGAAAA
GTTTTATATTAACTAAGTGGTATGTAAAG	TTTGATGAAAAAGAAGAATATAAGAGGGATGTGGCAA
GTTTTATATTAACTAAGTGGTATGTAAAG	TAACTCCAAACTCCGTAAGTCTTGCCATTTCTCCAA
GTTTTATATTAACTAAGTGGTATGTAAAG	GAGTATCAAGAGACCAGGGAAAGGCAGGTAAAGCAG
GTTTTATATTAACTAAGTGGTATGTAAAG	AATGGTAAAATGAAGGCATAATAAATTTCAATATAG
GTTTTATATTAACTAAGTGGTATGTAAAG	AGAGACAGTTTAAAACTAAATCAGAAGAAAAGTCTTATA
GTTTTATATTAACTAAGTGGTATGTAAAG	TTTAAAGCACCCTTAAAATCTGGTTGGGCATGTTCTC
GTTTTATATTAACTAAGTGGTATGTAAAG	TTGGTAGACAACCTGGTACTTGGCTTAAGATTGATAA
GTTTTATATTAACTAAGTGGTATGTAAAG	CATGTGATAGAGATAATATACAATATGATAGAGAAA
GTTTTATATTAACTAAGTGGTATGTAAAG	GCATAAAATACCTTCAAAAATAGCTTCTACTGACA
GTTTTATATTAACTAAGTGGTATGTAAAG	CGAAATAATGTTTTGTTTTCGATGGGTATATATACGG
GTTTTATATTAACTAAGTGGTATGTAAAG	TAGCTTTTGCGACTGGAAGATACGCAGATAATTTA
GTTTTATATTAACTAAGTGGTATGTAAAG	ATTGTAAGCTCTTTAATTTCTAAATTAGCTCCGATT
GTTTTATATTAACTAAGTGGTATGTAAAG	TTAAGTAGAGCAATGTATCATGGTTATGTGAAAAGT
GTTTTATATTAACTAAGTGGTATGTAAAG	CTAGTAAATTTTGCTAAAAGGCACTATTATTGTAGT
GTTTTATATTAACTAAGTGGTATGTAAAG	CAGTTGACACAATGAGTAAAAGCGAAGCAGAGCAAG
ATTTTATATTAACTAAGTGGTATGTAAAG	TTATGTTATAGGAGCAGGTTGCAAGAAGTATAAGCAA
GTTTTATATTAACTAAGTGGTATGTAAAG	CATAGATTTTGGAGATTTAAGGGAAGGCAATATGTGT
GTTTTATATTAACTAAGTGGTATGTAAAG	GGGTTTGCATCTTTATTAGATAATTTTATTAATAGA
GTTTTATATTAACTAAGTGGTATGTAAAG	TAAATATAGAATAAAGCATTTTAGTTTACAATGCAA
GTTTTATATTAACTAAGTGGTATGTAAAG	ACCTAAAAAATCAATGCAGCTTATCTTATATGCAATG
GTTTTATATTAACTAAGTGGTATGTAAAG	ATTAAGGAATAGTAATTACAGTGGACTGGAGTTAGT
GTTTTATATTAACTAAGTGGTATGTAAAG	ACGTTTCGCAAGGGATTTTTTAAAGCGAATGGATAA
GTTTTATATTAACTAAATCATATCTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP026615.2\|AVD37273.1\|790205_792860_+\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
CP026615.2\|AVD37272.1\|789501_789702_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD37261.1\|775451_776153_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
CP026615.2\|AVD37259.1\|772683_774534_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|313005
CP026615.2\|AVD37256.1\|768750_770667_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376899
CP026615.2\|AVD37263.1\|779053_780034_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
CP026615.2\|AVD37267.1\|784653_785199_+\|biotin-transporter-BioY	unknown	unknown	gnl\|CDD\|376871
CP026615.2\|AVD37270.1\|787826_788702_+\|dipicolinate-synthase-subunit-DpsA	unknown	unknown	gnl\|CDD\|181371
CP026615.2\|AVD37274.1\|793135_795355_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
CP026615.2\|AVD37262.1\|776163_778485_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
CP026615.2\|AVD37266.1\|783559_784330_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD37824.1\|778532_779051_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP026615.2\|AVD37269.1\|786359_787751_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341288
CP026615.2\|AVD37265.1\|782668_783097_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|236715
CP026615.2\|AVD37264.1\|780036_780303_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP026615.2\|AVD37260.1\|774535_775450_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
CP026615.2\|AVD37271.1\|788704_789295_+\|dipicolinate-synthase-subunit-B	unknown	unknown	gnl\|CDD\|181370
CP026615.2\|AVD37258.1\|771940_772678_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
CP026615.2\|AVD37257.1\|770945_771863_+\|transcriptional-regulator	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
CP026615.2\|AVD37268.1\|785219_786356_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|238383

Protein	Function_ID	Function_description	E-value
CP026615.2\|AVD37273.1\|790205_792860_+\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
CP026615.2\|AVD37261.1\|775451_776153_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.81963e-63
CP026615.2\|AVD37259.1\|772683_774534_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|313005	pfam09706, Cas_CXXC_CXXC, CRISPR-associated protein (Cas_CXXC_CXXC). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry describes a conserved region of about 65 amino acids from an otherwise highly divergent protein found in a minority of CRISPR-associated protein regions. This region features two motifs of CXXC.	1.22053e-18
CP026615.2\|AVD37256.1\|768750_770667_+\|ABC-transporter-permease	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	2.4854e-09
CP026615.2\|AVD37263.1\|779053_780034_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	2.35554e-174
CP026615.2\|AVD37267.1\|784653_785199_+\|biotin-transporter-BioY	gnl\|CDD\|376871	pfam02632, BioY, BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is a component of the BioMNY transport system involved in biotin uptake in prokaryotes.	2.69375e-36
CP026615.2\|AVD37270.1\|787826_788702_+\|dipicolinate-synthase-subunit-DpsA	gnl\|CDD\|181371	PRK08306, PRK08306, dipicolinate synthase subunit DpsA.	4.46497e-131
CP026615.2\|AVD37274.1\|793135_795355_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	3.30455e-107
CP026615.2\|AVD37262.1\|776163_778485_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	1.45683e-57
CP026615.2\|AVD37824.1\|778532_779051_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	2.06825e-60
CP026615.2\|AVD37269.1\|786359_787751_+\|AMP-binding-protein	gnl\|CDD\|341288	cd17633, AFD_YhfT-like, fatty acid-CoA ligase VraA. This family of acyl-CoA ligases includes Bacillus subtilis YhfT, as well as long-chain fatty acid-CoA ligase VraA, all of which are as yet to be characterized. These proteins belong to the adenylate-forming enzymes which catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain	5.1537e-141
CP026615.2\|AVD37265.1\|782668_783097_+\|N-acetyltransferase	gnl\|CDD\|236715	PRK10562, PRK10562, putative acetyltransferase; Provisional.	7.042e-46
CP026615.2\|AVD37264.1\|780036_780303_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.9342e-28
CP026615.2\|AVD37260.1\|774535_775450_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	3.27427e-54
CP026615.2\|AVD37271.1\|788704_789295_+\|dipicolinate-synthase-subunit-B	gnl\|CDD\|181370	PRK08305, spoVFB, dipicolinate synthase subunit B; Reviewed.	1.97666e-125
CP026615.2\|AVD37258.1\|771940_772678_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	9.11445e-20
CP026615.2\|AVD37257.1\|770945_771863_+\|transcriptional-regulator	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	6.43666e-41
CP026615.2\|AVD37268.1\|785219_786356_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	6.94409e-113

>CP026615.2|AVD37264.1|780036_780303_+|CRISPR-associated-endonuclease-Cas2
MFVIVTYDIVEAKSLNRIRKILRKYLTWTQNSVFEGNITDGKLHKCISEIENIIDNREDSIYIYEIKNPNSIKKKCYGIDKYSDEMFI
>CP026615.2|AVD37263.1|779053_780034_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MYKDYYIISNGNIKRKENTIYYYNLEGDKKILPVEQVDDIHIYGEVDLNTKLINYISQYGVMLHFYNYYGYYSGTYYPRKKNVSGFSLVCQSACYLDKNERLYLAKSFVESASYHILRNMRYYKVDESLIDAIKDELNDLNDVKEISELMGKEGRIRKTYYKSFNQILKDDFEFYKREKRPPKDPVNALMSFGNSIMYTNVLSEIYKTQLDPTISFLHEPSTKRFSLSLDIAEIFKPIIIDTIIFSLINNKRINKNDFEYQDKICYLSEKGKKKFLQEFENKMQTTIKHRNLNRKVSYRMFIRLECYKLIKHFINDERYKVLKVWW
>CP026615.2|AVD37824.1|778532_779051_+|CRISPR-associated-protein-Cas4
MPIDLDLLKVQGVKINYYYVCKRKLWLFSKGITMEQNSSRVLSGKIVHEDSYKRMKNKEMLIDDILKLDIIKDEYVKEVKISSKMKEADEMQLYYYLYYLKNSMGIEKKGTINYVKEKKQEELILTEEKERIIENTLININEINMKLSPPKIEKKPYCTKCAYYEFCFVKEE
>CP026615.2|AVD37262.1|776163_778485_+|CRISPR-associated-helicase/endonuclease-Cas3
MLYAKSNPVETLREHTDELLKQMNVLRESYGTNINSLNFLEEEIFWQLLDFVIEFHDIGKAFSPFQELIISRMDTKINEPKIVTHLENNVGHNYLSPAFIDYSYIDKKKNKELRAVLNQVIVYHHERDIFIDKDFKNLIQKILDEDLINKVYELQHEFKVRYPIKTEKLSKVYLQSVEKRIDKNHKYYNLYIMLKGILHRLDHSASAHEVVECNNVMNIGEHTENYLMKEFGSLRETQSFAQSNRNKNIILIASTGMGKTETALIWIDKDKAFFTLPLRVSINALFDRAKNIVGVGESNDTFLGLLHSTAIDYLEESNQENSSEIVDLAKLLSCKLTFSTIDQIFKFPFLYRGYEKVYSTLAYSKVVIDEIQAYSPEIAAVLVKGIEMIHKIGGKFMIMTATMPTIYIDELKKRGVVDSNLANLTCNTEKIRHCVSIVENSIDENLEQIIQSGINKKVLVIVNTVKSAIEKYELIEEIIKSKGIDINVNLLHSMYIQEDRAKLEKYIKEFADSDSNGIWITTQLVEASLDIDFDELHTENSTLDSLFQRFGRCYRSREYEENSPNIFIYTEKATGIGSIYDKDIVEKGLELLKNCMNGKKCFKMKEKHKVQMVKILYSKESLKDTDFEKKFTRALDILDTITPYSLGSNEAQNILRNIEGYTVIPEDIYRKIEKTLIRDYEELGQELTEAYSNDDRQLINEIKSKRKKARREIIKKTVNLPIYKAKQNIVDIQVKGLEDLKILLYKYDIHEDVHTKHIFGKGVIIGKEIDQFI
>CP026615.2|AVD37261.1|775451_776153_+|type-I-B-CRISPR-associated-protein-Cas5
MKVLKLDLFQETACYKKPFAMKITETYPLPPYSTINGLIHKILNATEYIPFNISVQGTYESIFNNYQTTYFYKKDSITSMPMNSHMLLNVNLIIHIGGDFDLLKEIYDSLLNYNEHLSLGRKEDLVRITDIRFVEVNKFEIDEDIQLDDYENYKLSECDIRMPIYIPKTSLQDKDIDGISYRLNNYYDNNAVGDKKRVWNKVDSYYVEDGNTISVGDILLDNEGDLLYFNNIN
>CP026615.2|AVD37260.1|774535_775450_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MKRGLTFTVIAQAQSLNYGEGIGNISELKKLSRADGNIYTFASRQCLRYDIVRLAAELFNWNLQVVDKEKGTIQFKDNISIRESEEMDLFGYMKTNKKDEKDKKGGSLTREAAVRLSNAISLEPYRSDMDFLNNKGLADRIGEHPNLANIEQHLSYYTYTVTIDLSKIGKDGEIELDNKEKCRRVVEFLEIIKVLNRNIRGRQENLSPLFVVGGVYEIANPFFLGRIKLKGDKNGFKINKQAIEEVVQGTFLGKYLKEFTYVGMVDGVFINKEEFKGLFEDNFLSVDKFFGQLVKEVKEYYGVN
>CP026615.2|AVD37259.1|772683_774534_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MKLRVYRGDWFFNMGIVGFLNIIKKSNKQAEIFIMEDYIEFDSSFLENFHEYYFNYFMDEYDVSKRIKKSIDYSINFIKSKPDKVKDGIKKIKDTVKQQNDKVKKFDEEKFNLIKEKLDSISKIKSYDEFDSLEILVDETIDIFKIKSINDRLTANLYKYVVQDNYFGQVSFFNVAKAKLDLDGLKQVMFNDYLRQIIYFGELEDLLEENDYDKLKNYLNDRLNSIAKDISEKKVSKSSVNTIEKIMKEINKNFIKKNKSIENIKEYMDSLEICEMCGLYKGILDEYSESNFAPLGVSTNNARNMFWKQEYVSSICDVCKLILFCTPAGATYTRKDYLTNEENEFYLFVNMDTSINELFDRNNSLKAQKSESSNSKDENPFNQLIKSIVEENKLKSEWQLRNILFVEFKASIDSKKCKINYFNIPTYLAKFFVKENKKIQSIYDYKLKSNVLDLILKSKDLKHLINNTLRNIVKSNLESNNKSNISGLSCFNVVQLRTILNNYKRGVYKMDYKKLRKIYESGCEIHDYYIDKNAKNKIEGITYKILNLIKVGNKNDFMQTILRIFSPSEKTPPEEILQIFVEEDLDFESVGYAFVTGLISGKYEGKDKLSNEKEEK
>CP026615.2|AVD37258.1|771940_772678_+|CRISPR-associated-endoribonuclease-Cas6
MKMKIEFSTSCIPISYNSLFMSIIKEAIKKSNEDYYKNMYYYKEKNNKKTKNFTFSVYVKKYSIEGDNFIIEDKVILNISTPDLELGFHIYNGLMTSKKCLYKDYELTRIRIDLSREKKVTEERVLFNALSPICVKSKEGKFLEITDDRYIEELNYITNEVVKNYRGSGLKRKLEFENIDLKKVVVKESLREFKKITGKEYQYINGYKGKFILKGDIDDLNIIYNLGLGFRRAQGFGDVDILEWR
>CP026615.2|AVD37257.1|770945_771863_+|transcriptional-regulator
MMILIQSRGKMKCKELAEELEVSERQIKSYKMYLEQAGIFINSTPGIYGGYEIDKCNSISLIKLLDSEVSILDMINSQLEYNNDIYKTEFNSIVEKIKAVLNTRVKSDTYMDYFTIQPQRNCDYKFEKNKCNEIIRAYTTKRKLWIEYYSLNSGNSERIVHPYGLFNYKSDTYMVAFCEKRFKFIDFKLCRIKNYKVLEEKYNVDKSFSWDEYSKNSIGIYKGEEINVVIKISHPFSTIIKEKVWVNNQQIIEYDDKSIMFKAKMRGYEEIKSWILSMGAYVEVVDPDSLRNDILSEIEKMKKIY
>CP026615.2|AVD37256.1|768750_770667_+|ABC-transporter-permease
MNIKQFAINNISRNIKAYLGYLASITISSSLLFSFVMFTSHPDLDLSQFPDYLKEGLKMSKIIAYLFLFFFVFYSVSVFLKSRYKEFGILYITGISNRQVMKLIFIENMIINIVSSVIGIIIGLIFAKIFLVVMSTFLELSPLKFYIPFNAILSTLIYFMILAVLTSLFTSFIVKENQVLKLLKGTKTPKPEPKTSLMLAILSICLFIIAYYNAVTSTDQYTTYLRLVPVTSLTIAATYLFFSQFSVFFIKKLKLNKRFYRKNTNMLWISNLIYKVKDNARIFFLITITSAVAFTAIGTVYSFWKDVKRQINLIYPNTIYYSTMTLHNDPKKPDSKEKDKERMRFIENNLKKEDIDYTRINGEFKTVFPKKSDFNVRIMKESKYLEITEVIGVKPISFEDNESISLLSSSLPGNKKIKENVTVGNRSLKVAKQVEECVMPAYYKNMYVVKDNFYDSIESKFIVDRFTAFEVEDSSKTIEICREFENKFDNESGMQPYLFFSKELMIETGKLMYSTFIFLAIFIGLIFFVTTSSFLYNKFYMDCQVDKKKYEQLNKLGMTYNEIKKASTIEIGIVFLLPYVVAVIHSIFALTALKNSFDLEVASSAVLVMGSLFLVQIVYFLIVRNNYLKEIKLNLVNY
>CP026615.2|AVD37265.1|782668_783097_+|N-acetyltransferase
MIRKLNNKDINKIMEIWEESTIKAHGFISKEYWQNNHNAVKNEYIPISDTFVYDIGDEIKGFISIIDKSFIGALFIKPKYQNLGIGGKLLDYATEKYKSLSLAVYKDNKKAVIFYNKKGFNVVKGQLNEDSGFKEYIMEYSK
>CP026615.2|AVD37266.1|783559_784330_-|hypothetical-protein
MKVNENNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVCFAIENNYLDLNMPSKNKKYTNIMEHLLDTSKQNEDKKIYNYLLNLNKDNNLDERPILDELNYNTSSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDITYKFSSKEAEPIEISNEVSSIRCCNCDELLEDVTLDKLSNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSYCCGNCDSEINLSQREHFKI
>CP026615.2|AVD37267.1|784653_785199_+|biotin-transporter-BioY
MKNTKVNIQDLTKMSICVALLCISSYIYIPLPFTPAGVTAQTIMINLIALILTPRQAFSTVGVYIMIGLIGIPVFGGGTSGIGKLLSPTGGFYFGFLFAALIISLLKGRNNDIKRYILITIFVGMPIIYFMGTVFMCYFNQMTVEAALFAAVVPFLIGDTIKSVIASFLGTKLNNVLRKNL
>CP026615.2|AVD37268.1|785219_786356_+|acetyl-CoA-C-acyltransferase
MEEVFILGGLRSHIGLKNGIFQFVQPELLGASVLKHLIKKYEIDKIDEIICGNAVGTGGNIARLMTLTAGVSNEVPAFTVDMQCASAMMSIDIAFSKIKSGQCDLIIAGGFESSSLQPMRTYHKNDKRYNINNPNYTVAQFSPDDNSQNSMLEGAERVAELYQIKKAELDFWVKESHKRAKEAREEKIFDDIIFPINNSTCDEGIRDKMSQRLLDRMPSILGKESITNAANSCLINDGASFIILCSKKYLEHAKNKPIAKIVNTCTIGTDANLSPTSAIKAMDKLLEIESLSYLDVSAVEFNEAFAVIDVLFQRKYPELIDRYNIFGGALAYGHPYGASGAIIALHLLKALEKTKGRYGICSIAAAGGLGSALMIERV
>CP026615.2|AVD37269.1|786359_787751_+|AMP-binding-protein
MNYYELLRIKSDRHKNKNFLIIDGEKYTYENILSYSEEIGKQIYLGENIPILIYSKNIMFQLISFFAINYSKNIPIICHYNLSKKVLDDILLKNNISIIISDESMDVIDLYDDNNNEVAKKVNLSIFNPKFNIYMYQYKKLINYLDKSICMGALSSGSTSVPKVLYRTYESWAGFFPIQNAIFNISGESILFINGTLSFTGNLNSIMSVLYEGGSIVISSGLNCKSWIRTIKQYNVTNIYLIPIKLQLLVKHLKESVLKVVSIFTGSQLLFEDTARNLKKYMPKSEIILYYGASELNYITYLCYDELIERPLSVGRPFPGIDVYIREEKIFVNTEYAVYNATKPYSVNDIGYFDNDGYLIFEGRSDDIVNIGGFKVSSTKIENEVKKIPQIEDAVVLPYSDTIRGNQIVLFVITIDKITKKDLLIKMKDNLMKNEIPKKIIFLNSFPYTSSEKIDRLALLKML
>CP026615.2|AVD37270.1|787826_788702_+|dipicolinate-synthase-subunit-DpsA
MSNQYDITVIGGDLRQVYMVKKLINKGYSVVTYGISNEIINGIVGKSTSLAEALSKSSIILCPIPFTKNQVNIENTDNCLDATIDNLLINLSPNQILFGGNIPTKVCKFCEQHSIQIYDFMKMNDVAILNAVATAEGAISEAIKRSIINIHQSNCLVLGYGRCAQILAKKLYALDANVCVGARNNDARSTASAFGYSSISLNQLDEKLLQFDYIFNTIPDCILTKERLEKVSQEVTIIDIASSPGGVDYSATKEVGINATLCLGLPGKYSPKTSGEILVNAIENIINERRD
>CP026615.2|AVD37271.1|788704_789295_+|dipicolinate-synthase-subunit-B
MRLEGLTIGVGFTGSFCTYDKIFIELENLVKEGANVHTIFSDVSQNIDCRFGNSEEFMKKAYELTGNKPIVTIEDAEPFGPKGIADIIIIAPCTGNTAAKLANGITDSPVLMAAKGHLRNDKPLVISISTNDALSFNFKNIGILLNSKNIYFVPFGQDNCKAKPNSMIAHTELIIPTIELALENKQLQPVIKSPHQ
>CP026615.2|AVD37272.1|789501_789702_-|hypothetical-protein
MKKLKIISIFSLIISVILTIGGIGIVTYYVNNLFIRGLSVFVLIMSSSFVSTTVRLIFEESKRYKF
>CP026615.2|AVD37273.1|790205_792860_+|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAHKEQVIIENKKENEVMSVGLDTVNNVESLVKKLAKIKEAQKIFATYTQEQVDKIFLAASLAANKQRVPLAIMAQKETGMGIAEDKVIKNHYASEYIYNAYKETKTCGVIEKDEAFGMTKIAEPIGVIAAVVPTTNPTSTAIFKALLALKTRNGIIFSPHPRAKNSTIEAAKVVLEAAVLAGAPEGIIGWIDEPSLELTTTVMKEVDLTLATGGPGMVKSAYSSGKPAIGVGAGNTPAIIDESADIKTAVNSILVSKTFDNGMICASEQSVIVLENIYNEVKKEFKERGAYLLDKDETEKIRNIILVNGGLNSKIVGQTACTIAKLAGFEVPVDTKVLIGEVESVEIEEAFAHEKLSPVLAMYKASDFDDAVRKAEKLVEDGGFGHTSSLYIDDVNQREKLDKFTSAMKTCRILINTPSSQGGIGDLYNFKLAPSLTLGCGSWGGNSVSENVGVKHLLNIKTVAERRENMLWFRAPEKVYFKKGCLGVALKELKDVMDKKRAFIVTDTFLYNNGYTKAVTDLLDEMNIKHTTFFEVEPDPTLECAKIGAKAMREFNPDVIISIGGGSAMDAGKIMWTLYEHPDVDFQDLAMRFMDIRKRVYTFPKMGEKANFVAIPTSAGTGSEVTPFAVITDQDTGVKYPLADYELMPNMAIVDSDMMMNMPKSLTSASGIDALTHALEAYVSMLATDYTNGLALQAIKSIFEYLPRAYDNGAKDPEAREKMANASTMAGMAFANAFLGVCHSMAHKLGAFHHVPHGVANALLITEVMKFNSSDAPKKMGAFSQYKYPEALKRYAEVASFLGLKGNSEEEKFQSLLSAIEDLKFKVGIPKTIKEFGVEESKFMDSIDEMVIQAFDDQCTGANPRYPLMNEIKDMYLNSYYGR
>CP026615.2|AVD37274.1|793135_795355_+|EAL-domain-containing-protein
MTRRSKSFTLIIILFLTSLFLTMGYIYIEDTKNLLMSEAKIHIKEVAIQGSQLAQRQIEKDLDVLNIFSNYYASNPDIPNEEKMKNLLDELENQKFYTMAIVDINGNAENTKGDKFSVKDREFFKNSIKGKKYVSSPYADEVNKSIKKITISVPLLNNDKVVGVLYCTYNINTLMKLINVSFYENNSISYVVKNDGTVILHPQEDSISKNIYKLLKQDNDIREVNSLKKELQENKTGATVLKMLEERRYLGYATMDNGNSENNYIKDWNLIFSIPETVVFSNSEKIINRAIYAVLFIILIFIAIIFYIIYIKKSNEKEILSLAYEDKVTHIGNQNKFYRECSKYLLDKPSLNYIIVYFDINNFKMINDTFGYEFGDNLLITIAKALKEELTEGEVFARLSSDYFAIFCDYKNGRNKIIRKLDSIRNNIESNLSIVFEISLCVGIYFVEEDEVDIQKAVNKANMARSVAKGKNINYAIYNEDVRNKLSEESMILDDIKIALVKNQFEVYYQPKFSLVNGEMIGSEALIRWNHPEHGFISPAVFIPIAEKSKLILKIGRFVFEKVCTDLSEWKKQGKKIVPVSVNLSRVELYQPDIVKFINKTIQMYNLSSDLIEIEITETVAINELNILKNVLNELRKYGFSISMDDFGTGYSSISCLRDMPIDILKLDKSFLDGIEHDERSRNIAKSIVSLAKSLDLVVIIEGVESKEQAELMKQFGCDLVQGFYFARPMPAKNFLDLL

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Crispr_ID: CP026615_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026615_5

1733088-1735751

TypeI-B

III-B

Consensus_repeat	Method
NGTTAAACAGTAACATGAGATGTATTTAAAT	CRT
GTTAAACAGTAACATGAGATGTATTTAAAT	PILER-CR
GTTAAACAGTAACATGAGATGTATTTAAAT	CRISPRCasFinder

40 spacers

cas3,cas5,cas7b,cas8b1,cas6,cas4,cas1,cas2

The CRISPR arrays of CP026615_5

>merge|CP026615|5|1733088-1735751|CRT,PILER-CR,CRISPRCasFinder
TGTATATTAGTGTTTTCAGTGTATTTAAGGGAATTATATTTTTAAGAAGTACTGATTTTAAAGTGGTTAAACAGTAACATGAGATGTATTTAAATATGTTTAAGTCAGATGGCTCACCAAATCAAATGTTTGTTAAACAGTAACATGAGATGTATTTAAATTTTATTGTAGCTGTTATAACTTCTTTATTTGTATTAGTTAAACAGTAACATGAGATGTATTTAAATTGATTTATTAGAGGAAAATAGAGAATTAAATATTAAGTTAAACAGTAACATGAGATGTATTTAAATTATTGCTCTAAATTTAGTAGACCAAGTTCAATTTCTGTTAAACAGTAACATGAGATGTATTTAAATTTAAATGCTTTATAAAGTATTAATTCATTTTGTAACGTTAAACAGTAACATGAGATGTATTTAAATTATTAATCCTTCTATTGGAAAATATCGTCTTCAAGAGTTAAACAGTAACATGAGATGTATTTAAATTATAGTTTTGTAGCTCTTTCAAGTTCATCTGCATTTGTTAAACAGTAACATGAGATGTATTTAAATATATATCTAAATGGATTATTATATCTAACTCCATCTGTTAAACAGTAACATGAGATGTATTTAAATATTTTATAATGGTAAAAAAGAGTTTTACATAGCTGGTTAAACAGTAACATGAGATGTATTTAAATTTTTGAAGTTTAGTTATATCTGGGTCACCAGTCTGTGTTAAACAGTAACATGAGATGTATTTAAATCAGCATCTAAACCTTCTCTTCTTGCTTCCTCTGAAGTTAAACAGTAACATGAGATGTATTTAAATTTAAAATTCAATTTAGTAAATGAAGTTAATTCTGGAGTTAAACAGTAACATGAGATGTATTTAAATTTTTCTTTTGCAGCACTTCCTAGAACATCTCCATCAGTTAAACAGTAACATGAGATGTATTTAAATTCAAATCTAACTGATGTTCTTTTATTATCAAAAGGTTAAACAGTAACATGAGATGTATTTAAATTCTTTAGCTTTTTCTATTTCAGCAATTATCTCTACTGTTAAACAGTAACATGAGATGTATTTAAATGGATTATCCAATCTTTAATCTTATTACCATACCATTGTTAAACAGTAACATGAGATGTATTTAAATTATCTCTTAAAGCACTATCTAATTCAACAATAGTTGGTTAAACAGTAACATGAGATGTATTTAAATTATTGAACTTAGCATCTAATTTAGTATTTTTAGTAGGTTAAACAGTAACATGAGATGTATTTAAATTAGAATAAAAATTACTTGCAGAATAAAAAATGTCTTCGTTAAACAGTAACATGAGATGTATTTAAATTAGAAAAAAGTGTACATTGACAACTGAATATCCCCTGTTAAACAGTAACATGAGATGTATTTAAATACACTTATTTTGATTTTATTTATTTTAATTTTTTATGTTAAACAGTAACATGAGATGTATTTAAATTCCATCTACTTTTTTACTTTTAGCTTTTTCTTTAGTGTTAAACAGTAACATGAGATGTATTTAAATAGTCTGAAGATGAGCGAATGTGCTATATCTGTAATAGTTAAACAGTAACATGAGATGTATTTAAATTTAAATATAATAAATCGTAATGTACAAAAATAACTTAGTTAAACAGTAACATGAGATGTATTTAAATTTTCTTGAGTTAATTGAACCCCCATTTTTAAGCTCCGTTAAACAGTAACATGAGATGTATTTAAATTTTTCTTCTAGCTCTTTTTTCTTAGCCATTTTACCAGTTAAACAGTAACATGAGATGTATTTAAATATGTTTATACATGAGTTTAGTGATAGGTTCTTGGTCGTTAAACAGTAACATGAGATGTATTTAAATAAGGCAAGTGATTTGCTATTTAGAATAGGTGTAAACGTTAAACAGTAACATGAGATGTATTTAAATATTTCTTTTTGTGAAGTGTTAAGAGATTGCTCTTCGTTAAACAGTAACATGAGATGTATTTAAATACAGTAGCTATTCCAATTTCTTCTGCTTGTGGCATAGTTAAACAGTAACATGAGATGTATTTAAATTCAAAGATGCCCCTCTAGCTGGTTTTTGGGTATCTAGTTAAACAGTAACATGAGATGTATTTAAATTGTGTTGAGTCGTGATATTGACTTTTTCGGAAACGGGTTAAACAGTAACATGAGATGTATTTAAATTTGTAGTCCTTCCATTTCCATCACACAAAAAGCATGTTAAACAGTAACATGAGATGTATTTAAATTCTATGTTATGTACATGATTACCTTGTTTGAGTAGGTTAAACAGTAACATGAGATGTATTTAAATTAAGAGTCTCTTTGTATATCAATTTCTCTAGTAGATGTTAAACAGTAACATGAGATGTATTTAAATTAAATTATTAGTTTTAAAATTTAAAGGGGGAAAAAAGTTAAACAGTAACATGAGATGTATTTAAATGCTAACTTAATTACTTGTTCCACATTTGCTAATACCGTTAAACAGTAACATGAGATGTATTTAAATAAATATTCAATATAGTTTTTAAATACACTTTCCATTGTTAAACAGTAACATGAGATGTATTTAAATTCATTAGTACTTGTTATTCCAGTAAAAGCTACTTTGGTTAAACAGTAACATAAGATGTATCTAAAT

>CP026615|5|2|1733088-1735751|CRT
TGTATATTAGTGTTTTCAGTGTATTTAAGG	GAATTATATTTTTAAGAAGTACTGATTTTAAAGTG
GTTAAACAGTAACATGAGATGTATTTAAAT	ATGTTTAAGTCAGATGGCTCACCAAATCAAATGTTT
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTATTGTAGCTGTTATAACTTCTTTATTTGTATTA
GTTAAACAGTAACATGAGATGTATTTAAAT	TGATTTATTAGAGGAAAATAGAGAATTAAATATTAA
GTTAAACAGTAACATGAGATGTATTTAAAT	TATTGCTCTAAATTTAGTAGACCAAGTTCAATTTCT
GTTAAACAGTAACATGAGATGTATTTAAAT	TTAAATGCTTTATAAAGTATTAATTCATTTTGTAAC
GTTAAACAGTAACATGAGATGTATTTAAAT	TATTAATCCTTCTATTGGAAAATATCGTCTTCAAGA
GTTAAACAGTAACATGAGATGTATTTAAAT	TATAGTTTTGTAGCTCTTTCAAGTTCATCTGCATTT
GTTAAACAGTAACATGAGATGTATTTAAAT	ATATATCTAAATGGATTATTATATCTAACTCCATCT
GTTAAACAGTAACATGAGATGTATTTAAAT	ATTTTATAATGGTAAAAAAGAGTTTTACATAGCTG
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTTGAAGTTTAGTTATATCTGGGTCACCAGTCTGT
GTTAAACAGTAACATGAGATGTATTTAAAT	CAGCATCTAAACCTTCTCTTCTTGCTTCCTCTGAA
GTTAAACAGTAACATGAGATGTATTTAAAT	TTAAAATTCAATTTAGTAAATGAAGTTAATTCTGGA
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTTCTTTTGCAGCACTTCCTAGAACATCTCCATCA
GTTAAACAGTAACATGAGATGTATTTAAAT	TCAAATCTAACTGATGTTCTTTTATTATCAAAAG
GTTAAACAGTAACATGAGATGTATTTAAAT	TCTTTAGCTTTTTCTATTTCAGCAATTATCTCTACT
GTTAAACAGTAACATGAGATGTATTTAAAT	GGATTATCCAATCTTTAATCTTATTACCATACCATT
GTTAAACAGTAACATGAGATGTATTTAAAT	TATCTCTTAAAGCACTATCTAATTCAACAATAGTTG
GTTAAACAGTAACATGAGATGTATTTAAAT	TATTGAACTTAGCATCTAATTTAGTATTTTTAGTAG
GTTAAACAGTAACATGAGATGTATTTAAAT	TAGAATAAAAATTACTTGCAGAATAAAAAATGTCTTC
GTTAAACAGTAACATGAGATGTATTTAAAT	TAGAAAAAAGTGTACATTGACAACTGAATATCCCCT
GTTAAACAGTAACATGAGATGTATTTAAAT	ACACTTATTTTGATTTTATTTATTTTAATTTTTTAT
GTTAAACAGTAACATGAGATGTATTTAAAT	TCCATCTACTTTTTTACTTTTAGCTTTTTCTTTAGT
GTTAAACAGTAACATGAGATGTATTTAAAT	AGTCTGAAGATGAGCGAATGTGCTATATCTGTAATA
GTTAAACAGTAACATGAGATGTATTTAAAT	TTAAATATAATAAATCGTAATGTACAAAAATAACTTA
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTCTTGAGTTAATTGAACCCCCATTTTTAAGCTCC
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTTCTTCTAGCTCTTTTTTCTTAGCCATTTTACCA
GTTAAACAGTAACATGAGATGTATTTAAAT	ATGTTTATACATGAGTTTAGTGATAGGTTCTTGGTC
GTTAAACAGTAACATGAGATGTATTTAAAT	AAGGCAAGTGATTTGCTATTTAGAATAGGTGTAAAC
GTTAAACAGTAACATGAGATGTATTTAAAT	ATTTCTTTTTGTGAAGTGTTAAGAGATTGCTCTTC
GTTAAACAGTAACATGAGATGTATTTAAAT	ACAGTAGCTATTCCAATTTCTTCTGCTTGTGGCATA
GTTAAACAGTAACATGAGATGTATTTAAAT	TCAAAGATGCCCCTCTAGCTGGTTTTTGGGTATCTA
GTTAAACAGTAACATGAGATGTATTTAAAT	TGTGTTGAGTCGTGATATTGACTTTTTCGGAAACGG
GTTAAACAGTAACATGAGATGTATTTAAAT	TTGTAGTCCTTCCATTTCCATCACACAAAAAGCAT
GTTAAACAGTAACATGAGATGTATTTAAAT	TCTATGTTATGTACATGATTACCTTGTTTGAGTAG
GTTAAACAGTAACATGAGATGTATTTAAAT	TAAGAGTCTCTTTGTATATCAATTTCTCTAGTAGAT
GTTAAACAGTAACATGAGATGTATTTAAAT	TAAATTATTAGTTTTAAAATTTAAAGGGGGAAAAAA
GTTAAACAGTAACATGAGATGTATTTAAAT	GCTAACTTAATTACTTGTTCCACATTTGCTAATACC
GTTAAACAGTAACATGAGATGTATTTAAAT	AAATATTCAATATAGTTTTTAAATACACTTTCCATT
GTTAAACAGTAACATGAGATGTATTTAAAT	TCATTAGTACTTGTTATTCCAGTAAAAGCTACTTTG
GTTAAACAGTAACATAAGATGTATCTAAAT

>CP026615|5|2|1733153-1735685|PILER-CR
GTTAAACAGTAACATGAGATGTATTTAAAT	ATGTTTAAGTCAGATGGCTCACCAAATCAAATGTTT
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTATTGTAGCTGTTATAACTTCTTTATTTGTATTA
GTTAAACAGTAACATGAGATGTATTTAAAT	TGATTTATTAGAGGAAAATAGAGAATTAAATATTAA
GTTAAACAGTAACATGAGATGTATTTAAAT	TATTGCTCTAAATTTAGTAGACCAAGTTCAATTTCT
GTTAAACAGTAACATGAGATGTATTTAAAT	TTAAATGCTTTATAAAGTATTAATTCATTTTGTAAC
GTTAAACAGTAACATGAGATGTATTTAAAT	TATTAATCCTTCTATTGGAAAATATCGTCTTCAAGA
GTTAAACAGTAACATGAGATGTATTTAAAT	TATAGTTTTGTAGCTCTTTCAAGTTCATCTGCATTT
GTTAAACAGTAACATGAGATGTATTTAAAT	ATATATCTAAATGGATTATTATATCTAACTCCATCT
GTTAAACAGTAACATGAGATGTATTTAAAT	ATTTTATAATGGTAAAAAAGAGTTTTACATAGCTG
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTTGAAGTTTAGTTATATCTGGGTCACCAGTCTGT
GTTAAACAGTAACATGAGATGTATTTAAAT	CAGCATCTAAACCTTCTCTTCTTGCTTCCTCTGAA
GTTAAACAGTAACATGAGATGTATTTAAAT	TTAAAATTCAATTTAGTAAATGAAGTTAATTCTGGA
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTTCTTTTGCAGCACTTCCTAGAACATCTCCATCA
GTTAAACAGTAACATGAGATGTATTTAAAT	TCAAATCTAACTGATGTTCTTTTATTATCAAAAG
GTTAAACAGTAACATGAGATGTATTTAAAT	TCTTTAGCTTTTTCTATTTCAGCAATTATCTCTACT
GTTAAACAGTAACATGAGATGTATTTAAAT	GGATTATCCAATCTTTAATCTTATTACCATACCATT
GTTAAACAGTAACATGAGATGTATTTAAAT	TATCTCTTAAAGCACTATCTAATTCAACAATAGTTG
GTTAAACAGTAACATGAGATGTATTTAAAT	TATTGAACTTAGCATCTAATTTAGTATTTTTAGTAG
GTTAAACAGTAACATGAGATGTATTTAAAT	TAGAATAAAAATTACTTGCAGAATAAAAAATGTCTTC
GTTAAACAGTAACATGAGATGTATTTAAAT	TAGAAAAAAGTGTACATTGACAACTGAATATCCCCT
GTTAAACAGTAACATGAGATGTATTTAAAT	ACACTTATTTTGATTTTATTTATTTTAATTTTTTAT
GTTAAACAGTAACATGAGATGTATTTAAAT	TCCATCTACTTTTTTACTTTTAGCTTTTTCTTTAGT
GTTAAACAGTAACATGAGATGTATTTAAAT	AGTCTGAAGATGAGCGAATGTGCTATATCTGTAATA
GTTAAACAGTAACATGAGATGTATTTAAAT	TTAAATATAATAAATCGTAATGTACAAAAATAACTTA
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTCTTGAGTTAATTGAACCCCCATTTTTAAGCTCC
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTTCTTCTAGCTCTTTTTTCTTAGCCATTTTACCA
GTTAAACAGTAACATGAGATGTATTTAAAT	ATGTTTATACATGAGTTTAGTGATAGGTTCTTGGTC
GTTAAACAGTAACATGAGATGTATTTAAAT	AAGGCAAGTGATTTGCTATTTAGAATAGGTGTAAAC
GTTAAACAGTAACATGAGATGTATTTAAAT	ATTTCTTTTTGTGAAGTGTTAAGAGATTGCTCTTC
GTTAAACAGTAACATGAGATGTATTTAAAT	ACAGTAGCTATTCCAATTTCTTCTGCTTGTGGCATA
GTTAAACAGTAACATGAGATGTATTTAAAT	TCAAAGATGCCCCTCTAGCTGGTTTTTGGGTATCTA
GTTAAACAGTAACATGAGATGTATTTAAAT	TGTGTTGAGTCGTGATATTGACTTTTTCGGAAACGG
GTTAAACAGTAACATGAGATGTATTTAAAT	TTGTAGTCCTTCCATTTCCATCACACAAAAAGCAT
GTTAAACAGTAACATGAGATGTATTTAAAT	TCTATGTTATGTACATGATTACCTTGTTTGAGTAG
GTTAAACAGTAACATGAGATGTATTTAAAT	TAAGAGTCTCTTTGTATATCAATTTCTCTAGTAGAT
GTTAAACAGTAACATGAGATGTATTTAAAT	TAAATTATTAGTTTTAAAATTTAAAGGGGGAAAAAA
GTTAAACAGTAACATGAGATGTATTTAAAT	GCTAACTTAATTACTTGTTCCACATTTGCTAATACC
GTTAAACAGTAACATGAGATGTATTTAAAT	AAATATTCAATATAGTTTTTAAATACACTTTCCATT
GTTAAACAGTAACATGAGATGTATTTAAAT

>CP026615|5|5|1733153-1735751|CRISPRCasFinder
GTTAAACAGTAACATGAGATGTATTTAAAT	ATGTTTAAGTCAGATGGCTCACCAAATCAAATGTTT
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTATTGTAGCTGTTATAACTTCTTTATTTGTATTA
GTTAAACAGTAACATGAGATGTATTTAAAT	TGATTTATTAGAGGAAAATAGAGAATTAAATATTAA
GTTAAACAGTAACATGAGATGTATTTAAAT	TATTGCTCTAAATTTAGTAGACCAAGTTCAATTTCT
GTTAAACAGTAACATGAGATGTATTTAAAT	TTAAATGCTTTATAAAGTATTAATTCATTTTGTAAC
GTTAAACAGTAACATGAGATGTATTTAAAT	TATTAATCCTTCTATTGGAAAATATCGTCTTCAAGA
GTTAAACAGTAACATGAGATGTATTTAAAT	TATAGTTTTGTAGCTCTTTCAAGTTCATCTGCATTT
GTTAAACAGTAACATGAGATGTATTTAAAT	ATATATCTAAATGGATTATTATATCTAACTCCATCT
GTTAAACAGTAACATGAGATGTATTTAAAT	ATTTTATAATGGTAAAAAAGAGTTTTACATAGCTG
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTTGAAGTTTAGTTATATCTGGGTCACCAGTCTGT
GTTAAACAGTAACATGAGATGTATTTAAAT	CAGCATCTAAACCTTCTCTTCTTGCTTCCTCTGAA
GTTAAACAGTAACATGAGATGTATTTAAAT	TTAAAATTCAATTTAGTAAATGAAGTTAATTCTGGA
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTTCTTTTGCAGCACTTCCTAGAACATCTCCATCA
GTTAAACAGTAACATGAGATGTATTTAAAT	TCAAATCTAACTGATGTTCTTTTATTATCAAAAG
GTTAAACAGTAACATGAGATGTATTTAAAT	TCTTTAGCTTTTTCTATTTCAGCAATTATCTCTACT
GTTAAACAGTAACATGAGATGTATTTAAAT	GGATTATCCAATCTTTAATCTTATTACCATACCATT
GTTAAACAGTAACATGAGATGTATTTAAAT	TATCTCTTAAAGCACTATCTAATTCAACAATAGTTG
GTTAAACAGTAACATGAGATGTATTTAAAT	TATTGAACTTAGCATCTAATTTAGTATTTTTAGTAG
GTTAAACAGTAACATGAGATGTATTTAAAT	TAGAATAAAAATTACTTGCAGAATAAAAAATGTCTTC
GTTAAACAGTAACATGAGATGTATTTAAAT	TAGAAAAAAGTGTACATTGACAACTGAATATCCCCT
GTTAAACAGTAACATGAGATGTATTTAAAT	ACACTTATTTTGATTTTATTTATTTTAATTTTTTAT
GTTAAACAGTAACATGAGATGTATTTAAAT	TCCATCTACTTTTTTACTTTTAGCTTTTTCTTTAGT
GTTAAACAGTAACATGAGATGTATTTAAAT	AGTCTGAAGATGAGCGAATGTGCTATATCTGTAATA
GTTAAACAGTAACATGAGATGTATTTAAAT	TTAAATATAATAAATCGTAATGTACAAAAATAACTTA
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTCTTGAGTTAATTGAACCCCCATTTTTAAGCTCC
GTTAAACAGTAACATGAGATGTATTTAAAT	TTTTCTTCTAGCTCTTTTTTCTTAGCCATTTTACCA
GTTAAACAGTAACATGAGATGTATTTAAAT	ATGTTTATACATGAGTTTAGTGATAGGTTCTTGGTC
GTTAAACAGTAACATGAGATGTATTTAAAT	AAGGCAAGTGATTTGCTATTTAGAATAGGTGTAAAC
GTTAAACAGTAACATGAGATGTATTTAAAT	ATTTCTTTTTGTGAAGTGTTAAGAGATTGCTCTTC
GTTAAACAGTAACATGAGATGTATTTAAAT	ACAGTAGCTATTCCAATTTCTTCTGCTTGTGGCATA
GTTAAACAGTAACATGAGATGTATTTAAAT	TCAAAGATGCCCCTCTAGCTGGTTTTTGGGTATCTA
GTTAAACAGTAACATGAGATGTATTTAAAT	TGTGTTGAGTCGTGATATTGACTTTTTCGGAAACGG
GTTAAACAGTAACATGAGATGTATTTAAAT	TTGTAGTCCTTCCATTTCCATCACACAAAAAGCAT
GTTAAACAGTAACATGAGATGTATTTAAAT	TCTATGTTATGTACATGATTACCTTGTTTGAGTAG
GTTAAACAGTAACATGAGATGTATTTAAAT	TAAGAGTCTCTTTGTATATCAATTTCTCTAGTAGAT
GTTAAACAGTAACATGAGATGTATTTAAAT	TAAATTATTAGTTTTAAAATTTAAAGGGGGAAAAAA
GTTAAACAGTAACATGAGATGTATTTAAAT	GCTAACTTAATTACTTGTTCCACATTTGCTAATACC
GTTAAACAGTAACATGAGATGTATTTAAAT	AAATATTCAATATAGTTTTTAAATACACTTTCCATT
GTTAAACAGTAACATGAGATGTATTTAAAT	TCATTAGTACTTGTTATTCCAGTAAAAGCTACTTTG
GTTAAACAGTAACATAAGATGTATCTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP026615.2\|AVD34642.1\|1743975_1745100_-\|DUF3810-domain-containing-protein	unknown	unknown	gnl\|CDD\|378933
CP026615.2\|AVD34629.1\|1726210_1726906_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
CP026615.2\|AVD34641.1\|1743759_1743864_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34628.1\|1725460_1725667_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34637.1\|1738920_1740075_+\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	unknown	unknown	gnl\|CDD\|235472
CP026615.2\|AVD34638.1\|1740087_1741092_+\|RIP-metalloprotease-RseP	unknown	unknown	gnl\|CDD\|308008
CP026615.2\|AVD34625.1\|1722039_1722153_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
CP026615.2\|AVD34640.1\|1742677_1743502_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34639.1\|1741274_1742330_+\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|377382
CP026615.2\|AVD34636.1\|1738553_1738757_+\|Cro/Cl-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226181
CP026615.2\|AXL65852.1\|1722242_1722341_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
CP026615.2\|AVD34627.1\|1724443_1725025_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34632.1\|1729640_1730381_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
CP026615.2\|AVD34626.1\|1722538_1724359_+\|bifunctional-diguanylate-cyclase/phosphodiesterase	unknown	unknown	gnl\|CDD\|238923
CP026615.2\|AVD34630.1\|1726896_1728657_+\|CRISPR-associated-protein-Cse4	cas8b1	mkCas0106_cas8b1_CAS-I-B	gnl\|CDD\|188234
CP026615.2\|AVD37733.1\|1737573_1737864_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP026615.2\|AVD34635.1\|1736364_1737363_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
CP026615.2\|AVD34634.1\|1735835_1736330_+\|Dna2/Cas4-domain-containing-protein	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP026615.2\|AVD34633.1\|1730404_1732963_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|187770
CP026615.2\|AVD34631.1\|1728649_1729639_+\|CRISPR-associated-protein	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458

Protein	Function_ID	Function_description	E-value
CP026615.2\|AVD34629.1\|1726210_1726906_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	3.07743e-18
CP026615.2\|AVD34642.1\|1743975_1745100_-\|DUF3810-domain-containing-protein	gnl\|CDD\|378933	pfam12725, DUF3810, Protein of unknown function (DUF3810). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 333 and 377 amino acids in length. There is a conserved HEXXH sequence motif that is characteristic of metallopeptidases. This family may therefore belong to an as yet uncharacterized family of peptidase enzymes.	4.41063e-125
CP026615.2\|AVD34637.1\|1738920_1740075_+\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	gnl\|CDD\|235472	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.	0
CP026615.2\|AVD34638.1\|1740087_1741092_+\|RIP-metalloprotease-RseP	gnl\|CDD\|308008	pfam02163, Peptidase_M50, Peptidase family M50.	1.00896e-72
CP026615.2\|AVD34625.1\|1722039_1722153_+\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.26855e-11
CP026615.2\|AVD34639.1\|1741274_1742330_+\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	gnl\|CDD\|377382	pfam04551, GcpE, GcpE protein. In a variety of organisms, including plants and several eubacteria, isoprenoids are synthesized by the mevalonate-independent 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway. Although different enzymes of this pathway have been described, the terminal biosynthetic steps of the MEP pathway have not been fully elucidated. GcpE gene of Escherichia coli is involved in this pathway.	0
CP026615.2\|AVD34636.1\|1738553_1738757_+\|Cro/Cl-family-transcriptional-regulator	gnl\|CDD\|226181	COG3655, COG3655, Predicted transcriptional regulator [Transcription].	5.3259e-13
CP026615.2\|AXL65852.1\|1722242_1722341_+\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.47328e-07
CP026615.2\|AVD34632.1\|1729640_1730381_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	8.69345e-53
CP026615.2\|AVD34626.1\|1722538_1724359_+\|bifunctional-diguanylate-cyclase/phosphodiesterase	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	3.28674e-84
CP026615.2\|AVD34630.1\|1726896_1728657_+\|CRISPR-associated-protein-Cse4	gnl\|CDD\|188234	TIGR02591, cas_Csh1, CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI. This domain is found in the C-terminal 2/3 of a family of CRISPR associated proteins of the Hmari subtype. Except for the two sequences from halophilic archaea this domain contains a pair of CXXC motifs.	9.50984e-15
CP026615.2\|AVD37733.1\|1737573_1737864_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.32926e-26
CP026615.2\|AVD34635.1\|1736364_1737363_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.60063e-138
CP026615.2\|AVD34634.1\|1735835_1736330_+\|Dna2/Cas4-domain-containing-protein	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	9.71529e-51
CP026615.2\|AVD34633.1\|1730404_1732963_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|187770	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DEAD/DEAH box helicase DNA helicase cas3'; Often but not always is fused to HD nuclease domain; signature gene for Type I.	1.91612e-33
CP026615.2\|AVD34631.1\|1728649_1729639_+\|CRISPR-associated-protein	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.0311e-49

>CP026615.2|AVD34633.1|1730404_1732963_+|CRISPR-associated-helicase/endonuclease-Cas3
MYFKKVELFDISNNINNCKNIYAHINKDRKPETLKEHSDLSYSYLMKLCVKKDLSSCLERIENKFFKKDSFLSKNFYREIILNMVYMHDIGKINSSFQFVKMQNKNFKKISLRYTKHSFISSMLYFDYYFEKLKKYDFEEKKILSLFLMINTYTISKHHGVLKSFKEFLFLFKDEFINIKENFKDLFKNNYNLELKSVPKTIEKMVRGVEGYLDDSHIKDNLAIDLYIYSKLMFSIVTSCDFYATSEYNSGNSIDGFGTIDNYNKYYDVLKKSEIYKGMKKYREYLNNNSECPYKENDINRLRTEMSIEAEDAITHNTRKRIFYLEAPTGSGKTVTSINLALKSIELNQSLKKIFYIFPFNTLVEQTKDVFINEIFNSVKDIQKDVVVINSITPIQTEDKEEDNKNVEYCVTKQEIDYDKSLLNRQFLHYPIVLTTNIGFFNYLFGVSREECFPLIHMINSVIILDEIQNYKNEIWKEIILFLEKYADILNIKFIIMSATLPRLNKLGCNDDNFAYLVKNREKFFKNHLFKDRVNISFEMLNSEINDIEEISEKVIEEAEIYNKILIEFIKKSSALEFYKNIKEKLKYKLEDVFLLTGDDNKLERKKIINKIKDMNSVILVATQVVEAGVDIDMDLGFKDISTIDSDEQFLGRINRSCKKLNSKVYFFNLDDASKIYKKDVRKERHLTLNEESNRKIILDKDFEKYYDKIIARIEENKHKHNDKNIEVFIKDIVGNLNFTEVKKWMALIPDLKEYTIFLNTIVKDESGNMIVGSDVWYEYISLLKNDNVEYSEKRVKMSEIMEKLDYFTYKVQKFDNSFNDLVGDIFYIDDGSKYFTEGKFDRSKFNQNEFL
>CP026615.2|AVD34632.1|1729640_1730381_+|type-I-B-CRISPR-associated-protein-Cas5
MEVLKFNLSGKTAFFKKPDVNSIIYFTYGNIHKIALMGILGACLGLGGYNQQSKEDEYPEFYSLLKDIKMSIVPKHEFGYINKKVHIFNNSVGYASKEEGGNLIIKEQWLENVSWDIYIQLEDSTTSRELKRRFLSNKFVYIPYLGKNDHIANISEIEIITDFYKTEDINRVDSFFIREDFEFEKSYFDDNDDYEEPFKYQEKLPYRLHRMTNQYILETIIFTNMSVKLINKKEVYQVKGLNLIFI
>CP026615.2|AVD34631.1|1728649_1729639_+|CRISPR-associated-protein
MNRRVYGVLGIKSIMSNWNADFSGYPKTTSTGEVFGSDKALKFPMKKMWENEGEKVLYVKSLKIDESKKGEIKIRPKSLKERYEELFDIEELKLEKNQQKVLENLFKAIDVKNFGATFAEEGNNIGIMGAVQIGQGFNKYEDINVEEQQILSPFRDPRAKDKKKSTNEEEKEDANSTTLGKKIVSDEAHYFYPFSINPKAYEVFVNMGVTDGYTKNDYKKFKEAALVSATAFNTNSKLGCENEFALFVETDEELYLPDLAQYITFEKREKSKDLICINIIHLIAELKDDIKSVEIYYNPYKIEIKPFKDEILPKIDKVKFMNIFTRKEV
>CP026615.2|AVD34630.1|1726896_1728657_+|CRISPR-associated-protein-Cse4
MVIGGENLLKDCLEIFEKEYKSLGNRLITDSYVLSYGTYILVKNFSNIDILEVSKNNVDSTEDIYHKFCELDYLSKLVSIDKSVDSKKIIHSNNYLSFFVKKENLRPDKNNNVKLTEEIIDNYYDALLNPRIKYKSDKRKKEIYDSIENKYGKVDENKLNKIRLWIKTNIFDLVESVKKDKNYLKIFFDEKIELYNDENQKYLYPNIYNKNDFNVIIDGKNYGLPNDNMQLNEKKPFLKLKTRIRNSTPYLISDDEVLLQKAFFDYLMNKAANGEEVVYISSEKGIHRKTDIPNEFSGYILRIKKGKELEIHDFDTVVNLNTKIKRINVECIIPIEYERHNLKPNLEIGYINNLIKLEKTIDTIFFNKFMCNSYFKEIKNINLSDLVLRDILIRHREGLYTWFYKGRDNIVKQTFSNYSMGIIENSIKNNNYIRAKEQYNLRIAIINYFHGGSNMADKIKVISESLFEKINSIKTKCIQSDEEYYFAVGQLASYFISKNKSKNKNHSLINPILNAQNRKKIMLEIEKLFKKYNYDISYDNNRRFKNLYSMIVGYEVEEKKVNRDLLIGGYLYYSLIYTKSEENENE
>CP026615.2|AVD34629.1|1726210_1726906_+|CRISPR-associated-endoribonuclease-Cas6
MIKCLEMSVKVYLLENISLDNTSKEIRKLIDDTLIIEEKYKEFHNKAGFKNYSFNLLYPLEKDKVYKKDCIYTFIIRTVDSELGMYFMNNLKNQYSDKIKVITMSKKVIPKKHIESIYSVTPIIAKFEDGYWRSNKTVEDLEKRIRENLIKKYNEFTNSKIDEDFELFQVIKFINRKPISTKYKNISLLGDKISFKVSENDMAQEIANFALGVGVGEINSRGFGFVNYRWL
>CP026615.2|AVD34628.1|1725460_1725667_-|hypothetical-protein
MNQSQEKDLEFIKNHWDLTIIEKERNVTRIIRYSLIILAIIAFFLPTKIKFSIYIFISLFCWLMYLVL
>CP026615.2|AVD34627.1|1724443_1725025_-|hypothetical-protein
MSYLLKINQFERSYDIGIFKNEQSIHKFIEKIPFVKKDSSNFNYTNYYMEFEDIPEYYEVNFNNYLYIITKFSFIPDGTEIFFTWDEIHCWDEKVATDKTFINGETLVDSYSFPNNEVKNYIQKRESLYRETKKYYKEKGLKIKRHALGSEDGEYVELVDDSILYLLDVHAVEIWEQSKNIEEFLYKYKKYFE
>CP026615.2|AVD34626.1|1722538_1724359_+|bifunctional-diguanylate-cyclase/phosphodiesterase
MKKKYDFLIYAAIWLVAIIIFIFSLYHSIEHIKIINYTGIISSETQKVTKQELNNKRNDKLISQLDSILIELRTGNGKHRLQRCDNKEFQEKLIEMDAMWDSMKKEIRKVRNGGSGDKLYKLSEKYSSLSNQVVFISEKHSDIKLHFFATVLFIYLIISTISLLIWEYYNKRKFDKIFYTDNLTKIKNQVAFENRAIEILSHAYNKEYVLLNIDIDNFKYINDTHGYEYGDKVLVIVANVLAKTFNTKETCARVGSDNFVILAKYRESLLYEISKTLTDAIISELNMNVTQTISFCIGAYLVEIEKSNYKYINSIMDKANIAHKVSKMRGISSTVWYNENLLKQLQMENSIYNHMYKALENEEFQMYLQPKFQISSLNVVSAEALVRWFSPELGFLSPDQFIPLFEKSGFIIELDFYMLKKACSFIKKTFMKKNKYTYPIAVNFSRVTIYQNDFYQRFLDTVREYEIPFKYIEIEVTESAFNEISEPVISILDKLEKLGFLISMDDFGSGYSSLSLLCSLSINGLKLDKSLLKEKFNRAKVYSIIKCIIEMSHSIDMSIVCEGIETKKDLEFLKTVKCDLGQGFYFSKPIEEKEFFNKYVMDKQYN
>CP026615.2|AXL65852.1|1722242_1722341_+|diguanylate-cyclase
MSVSIGISLYSKYGEQFYKLYRHADSALYRVK
>CP026615.2|AVD34625.1|1722039_1722153_+|diguanylate-cyclase
MGYVFGDKILIDLAECLKRYFRETDTVGRVGGDEFII
>CP026615.2|AVD34634.1|1735835_1736330_+|Dna2/Cas4-domain-containing-protein
MKITGTLINYYFHCKRQCWLLGNRINLEENSEDVKIGRLLHELKEEKSKYKEIAIENIKIDKLTREYLVEVKKSDADIEAVKWQVLLYLKKLKEKGIVRKGKIEFIEKNKTNKKIVFVDLSEVSEEQLISIEREIVNLINSDKAPCPDLKKGCKKCAYYEYCYI
>CP026615.2|AVD34635.1|1736364_1737363_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MGKTKYITSMGELTRKDNSICFRKNGRNVYIPVENTSEIFCLNEVSLNSKLLDFLSRANIVVHFFNYYGGYSGTFYPKEYLISGKVTVAQVKTFEDRREEIAKSIVNGIRINAINTLSHYYKHGNSEIQPLLSHLKKDSINKLEKSNNIKEILSVEGDIWQTFYTSFKYILREEFIFNKRVKRPPDNPLNAMISFGNSILYSKTVTAIYNTHLNQSVSFLHEPSESRFSLSLDLSENFKHVITFKTIFDLVNNRKINIEKHFDKNLNYCVLNDEGKQIFINSLEERLESVKEHPKLKRKVSLKTCIKLDAYKMLKCIMEEKSFIPYNIKDGL
>CP026615.2|AVD37733.1|1737573_1737864_+|CRISPR-associated-endonuclease-Cas2
MKKKNNLNYNYVFVVYDVGEKRVSKVFKVCKKYLSHFQKSVFRGEITPSKIMSLKRDLENIIDKDNDFVCIIKLMNSNTFEEEILGNNSNCENMIL
>CP026615.2|AVD34636.1|1738553_1738757_+|Cro/Cl-family-transcriptional-regulator
MISYAPLWKLLIDRKIKKMEFVNISGISISVLGRLGNDKSVSMDTMEKICLALDCKIEDVVEIKKGI
>CP026615.2|AVD34637.1|1738920_1740075_+|1-deoxy-D-xylulose-5-phosphate-reductoisomerase
MKKISILGSTGSIGKQTLDVVREHRDKFEIVAISANSNIELLLEQIVEFKPKYVTVFEENKALKLKEMLPKNIEIEVLAGMEGLKIISSLDEVDVLLTAVVGMIGLVPTLCAIKKGIDIALANKETLVTAGELVMKEAEKYNVNILPVDSEHSAIFQCLNGENKKNIEKIILTASGGPFRGKKKGELVNITKNEALKHPNWSMGRKISIDSSTLMNKGLEVIEARWLFGVEQENIDVVVHPQSIIHSMVQYADSSIIAQLGCPDMRLPIQYALTYPDRMESSFERMNFSKFSTLTFEEPDLETFPCLKLAYECLKMGGTYSSVLNSANEVLVSEFLEDKIGFYDIPYYIEKTLEVHSSISEPTLEEILETDRWSRAYVANLIKK
>CP026615.2|AVD34638.1|1740087_1741092_+|RIP-metalloprotease-RseP
MTIIAALILFSIIVLIHELGHFIFAKRSGIKVNEFSIGMGPKIYSVKKDTEYSIRALPIGGYVSMEGEDEEQISPNSFGNKSILQRFSTIVAGPIFNIILAAILLVPVFLYIGSPTTKLGKIMPDTPAQAVGLQVGDKINKINGNSVKTWDEVANIINTSSGGELKLSITRDGSDKVVNVTPKNNNGKYEIGIQPQREKDFWGSIVNACKTTVDMTKQMLTFLGQMITGRVPGGIGNAVAGPVGVIGMVSDAARTGIINVVYLAAVISLNLGIVNLLPIPALDGWRILMLLLEAVRGGKKLDPNKEGMINVVGFGALMLFMLFITYKDILRLFQ
>CP026615.2|AVD34639.1|1741274_1742330_+|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase
MSYERRKTREVSVGTVKIGGENPISIQSMTNTDTRDADATIAQIKRLEEAGCDIVRVAVPDIKAAKNIAKIKSSVNIPIIADIHFDYKLALEAIEQGVDGIRINPGNIGSIERVKMVVEKCKERNLKIRIGVNGGSLEKELLKKYGSATAEALVESAMGHIKILEDLDFHNIVISLKSSDIYKTVDAYELISKKVDYPLHIGITESGSVHKGTIKSSIGVGALLLKGIGDTVRISLTGDPVEEVIVGKQILRSLGLLNDKIKVISCPTCGRCNIDLISVVNEVEEKIGSMEKNITVAIMGCAVNGPGEAREADIGIAGGKGEGLLFKKGEIVRMIDGNKLVDELLEEIEKL
>CP026615.2|AVD34640.1|1742677_1743502_+|hypothetical-protein
MRYKKISSLPILVVALLITGTTTTFSLSTTNSEKTSVYLASTVSTITKKVSDIQSSKGLVYNENIPLFINNSKIQYDDTPYHWPSNVISLTNSSEKAIMDYEITCLAYDKNGKPLELYWDAQNVAADGEVGSVGFSPAGVDYGIVTGISPVSPKSYSHTYRKMQQSPPQDIISMFEKQQGKAWVENWLKEWKQMEKEYAKQNAIAPGKNQNDAFLLFDKWKQSTGEHGVKYIISCVKQVTFNDGSVWKNSAYENWLKSFQGKEVSNSVLENYYK
>CP026615.2|AVD34641.1|1743759_1743864_+|hypothetical-protein
MWKFYVLKILVKIFIKKDNRNVLTKIVRIEMLYR
>CP026615.2|AVD34642.1|1743975_1745100_-|DUF3810-domain-containing-protein
MSKKTKYFSLILFPIALLLNFIASKVPNIVEKYYSQFIDKIIVQVLSKVSGIFPFSLYEITMYIIVISIFLFLCCTLSTIFNKKKKLNIFLKNSILNILSIVSIVYFLFVVLWGINYNRIPLETTLINNYNLENNTSIQSKQHSVKELTKLYKFLIIKANETRKLTLQDKNGIVKSNTDYNGVINRAQLGYDNILDILPSVSGSYSKPKYIISSNLMCYTGITGIYFPFTGEANVNIAIPDLYIPCTVEHEMAHQRGFASEDEANFIAYLTSIKHPNIDFNYSGYILALNYTASALSKVDYNAYVDISAGISDSVRRDLKNESKFWQKYEGKIDEISNEFNNSYLKANGVTEGTQSYGKMVDLLLTYYELYPYN

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Crispr_ID: CP026615_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026615_6

1845853-1846819

Orphan

I-A

Consensus_repeat	Method
GTTTTATATTAACTAAGTGGTATGTAAAT	PILER-CR
GTTTTATATTAACTAAGTGGTATGTAAAT	CRISPRCasFinder
NNNNNNGTTTTATATTAACTAAGTGGTATGTAAAT	CRT

14 spacers

The CRISPR arrays of CP026615_6

>merge|CP026615|6|1845853-1846819|PILER-CR,CRISPRCasFinder,CRT
GTTTTATATTAACTAAGTGGTATGTAAATTTAAGCTTAAAGATTATGGTTTTCAAGTTTTAGTTAAGTTTTATATTAACTAAGTGGTATGTAAATTTAAGAAATGCAGATAATAGGATACCTTTCAACTGGGTTTTATATTAACTAAGTGGTATGTAAATTGGAAACTAATATTTATATAAAACTTGTAAATATACAGGTTTTATATTAACTAAGTGGTATGTAAATCGAGAAATTGAGCTAATTTTACTATTATCAGCATTGTTTTATATTAACTAAGTGGTATGTAAATAAAGGTGTGAAAAGAGATGAGTTAAATCAAAGTGAAGTTTTATATTAACTAAGTGGTATGTAAATGAAACGAAGCTAGTTATTGTGATTATACAAGTTTCCGTTTTATATTAACTAAGTGGTATGTAAATTTAATAGCACATCTTCGCTTTCAAGTTTCTCTATCAGTTTTATATTAACTAAGTGGTATGTAAATTATATATTGGATGTCAATGTCAAGAATACAAAATTTAGTTTTATATTAACTAAGTGGTATGTAAATATAGGAAAATAGAGATAGGTTCACAATCTAATGATAGGTTTTATATTAACTAAGTGGTATGTAAATATTTTTTCTTTTAGTTTTTTAGGAACTGGTAATCCACAGTTTTATATTAACTAAGTGGTATGTAAATTTCTGAATCATATGAAAACAAAATCTTATTTGTATTGTTTTATATTAACTAAGTGGTATGTAAGTGAAATTATTAATGTTATTTCTACTCTTGCAGTTGCGTTTTATATTAACTAAGTGGTATATAAAGCATAGTCTATTGAACATTTATTAAGAGATAACTTTCGTTTTATATAGTTTTATATTAGCTATATTGAATTTAAATGTTTCACTATTGGACAACGGAAGTTTTTTCAGTGAGTAAAGATTGAATCACTTTATATTTATCTTAATTATGTGATAA

>CP026615|6|3|1845853-1846537|PILER-CR
GTTTTATATTAACTAAGTGGTATGTAAAT	TTAAGCTTAAAGATTATGGTTTTCAAGTTTTAGTTAA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTAAGAAATGCAGATAATAGGATACCTTTCAACTGG
GTTTTATATTAACTAAGTGGTATGTAAAT	TGGAAACTAATATTTATATAAAACTTGTAAATATACAG
GTTTTATATTAACTAAGTGGTATGTAAAT	CGAGAAATTGAGCTAATTTTACTATTATCAGCATT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAAGGTGTGAAAAGAGATGAGTTAAATCAAAGTGAA
GTTTTATATTAACTAAGTGGTATGTAAAT	GAAACGAAGCTAGTTATTGTGATTATACAAGTTTCC
GTTTTATATTAACTAAGTGGTATGTAAAT	TTAATAGCACATCTTCGCTTTCAAGTTTCTCTATCA
GTTTTATATTAACTAAGTGGTATGTAAAT	TATATATTGGATGTCAATGTCAAGAATACAAAATTTA
GTTTTATATTAACTAAGTGGTATGTAAAT	ATAGGAAAATAGAGATAGGTTCACAATCTAATGATAG
GTTTTATATTAACTAAGTGGTATGTAAAT	ATTTTTTCTTTTAGTTTTTTAGGAACTGGTAATCCACA
GTTTTATATTAACTAAGTGGTATGTAAAT

>CP026615|6|6|1845853-1846741|CRISPRCasFinder
GTTTTATATTAACTAAGTGGTATGTAAAT	TTAAGCTTAAAGATTATGGTTTTCAAGTTTTAGTTAA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTAAGAAATGCAGATAATAGGATACCTTTCAACTGG
GTTTTATATTAACTAAGTGGTATGTAAAT	TGGAAACTAATATTTATATAAAACTTGTAAATATACAG
GTTTTATATTAACTAAGTGGTATGTAAAT	CGAGAAATTGAGCTAATTTTACTATTATCAGCATT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAAGGTGTGAAAAGAGATGAGTTAAATCAAAGTGAA
GTTTTATATTAACTAAGTGGTATGTAAAT	GAAACGAAGCTAGTTATTGTGATTATACAAGTTTCC
GTTTTATATTAACTAAGTGGTATGTAAAT	TTAATAGCACATCTTCGCTTTCAAGTTTCTCTATCA
GTTTTATATTAACTAAGTGGTATGTAAAT	TATATATTGGATGTCAATGTCAAGAATACAAAATTTA
GTTTTATATTAACTAAGTGGTATGTAAAT	ATAGGAAAATAGAGATAGGTTCACAATCTAATGATAG
GTTTTATATTAACTAAGTGGTATGTAAAT	ATTTTTTCTTTTAGTTTTTTAGGAACTGGTAATCCACA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTCTGAATCATATGAAAACAAAATCTTATTTGTATT
GTTTTATATTAACTAAGTGGTATGTAAGT	GAAATTATTAATGTTATTTCTACTCTTGCAGTTGC
GTTTTATATTAACTAAGTGGTATATAAAG	CATAGTCTATTGAACATTTATTAAGAGATAACTTTCGTTTTATATA
GTTTTATATTAGCTATATTGAATTTAAAT

>CP026615|6|3|1845853-1846819|CRT
GTTTTATATTAACTAAGTGGTATGTAAAT	TTAAGCTTAAAGATTATGGTTTTCAAGTTTTAGTTAA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTAAGAAATGCAGATAATAGGATACCTTTCAACTGG
GTTTTATATTAACTAAGTGGTATGTAAAT	TGGAAACTAATATTTATATAAAACTTGTAAATATACAG
GTTTTATATTAACTAAGTGGTATGTAAAT	CGAGAAATTGAGCTAATTTTACTATTATCAGCATT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAAGGTGTGAAAAGAGATGAGTTAAATCAAAGTGAA
GTTTTATATTAACTAAGTGGTATGTAAAT	GAAACGAAGCTAGTTATTGTGATTATACAAGTTTCC
GTTTTATATTAACTAAGTGGTATGTAAAT	TTAATAGCACATCTTCGCTTTCAAGTTTCTCTATCA
GTTTTATATTAACTAAGTGGTATGTAAAT	TATATATTGGATGTCAATGTCAAGAATACAAAATTTA
GTTTTATATTAACTAAGTGGTATGTAAAT	ATAGGAAAATAGAGATAGGTTCACAATCTAATGATAG
GTTTTATATTAACTAAGTGGTATGTAAAT	ATTTTTTCTTTTAGTTTTTTAGGAACTGGTAATCCACA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTCTGAATCATATGAAAACAAAATCTTATTTGTATT
GTTTTATATTAACTAAGTGGTATGTAAGT	GAAATTATTAATGTTATTTCTACTCTTGCAGTTGC
GTTTTATATTAACTAAGTGGTATATAAAG	CATAGTCTATTGAACATTTATTAAGAGATAACTTTCGTTTTATATA
GTTTTATATTAGCTATATTGAATTTAAAT	GTTTCACTATTGGACAACGGAAGTTTTTTCAGTGAGTAAAGATTGAATC
ACTTTATATTTATCTTAATTATGTGATAA

Protein	Signature genes	Signature genes Name	Protein_function
CP026615.2\|AVD34728.1\|1848965_1849181_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|226181
CP026615.2\|AVD34732.1\|1852538_1853012_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
CP026615.2\|AVD34734.1\|1854749_1855784_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234761
CP026615.2\|AVD34726.1\|1847447_1847741_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34723.1\|1843372_1843951_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|377744
CP026615.2\|AVD34718.1\|1837795_1838989_+\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
CP026615.2\|AVD34716.1\|1836787_1837435_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34717.1\|1837605_1837845_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34727.1\|1848649_1848823_-\|succinate-dehydrogenase	unknown	unknown	unknown
CP026615.2\|AVD37736.1\|1849766_1849925_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34720.1\|1840513_1841170_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367360
CP026615.2\|AVD34730.1\|1850644_1851343_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|274612
CP026615.2\|AVD34733.1\|1853304_1854072_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379530
CP026615.2\|AVD34721.1\|1841323_1842409_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
CP026615.2\|AVD34731.1\|1851600_1852158_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP026615.2\|AVD34725.1\|1845369_1845555_-\|integrase	unknown	unknown	gnl\|CDD\|271189
CP026615.2\|AVD34729.1\|1849191_1849659_-\|DUF2975-domain-containing-protein	unknown	unknown	gnl\|CDD\|378586
CP026615.2\|AVD34719.1\|1839006_1840299_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
CP026615.2\|AVD34724.1\|1844344_1845217_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
CP026615.2\|AVD34722.1\|1842599_1843316_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108

Protein	Function_ID	Function_description	E-value
CP026615.2\|AVD34734.1\|1854749_1855784_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	5.49771e-179
CP026615.2\|AVD34722.1\|1842599_1843316_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	4.04358e-99
CP026615.2\|AVD34723.1\|1843372_1843951_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|377744	pfam06962, rRNA_methylase, Putative rRNA methylase. This family contains a number of putative rRNA methylases. Note that many family members are hypothetical proteins.	7.51313e-74
CP026615.2\|AVD34728.1\|1848965_1849181_-\|transcriptional-regulator	gnl\|CDD\|226181	COG3655, COG3655, Predicted transcriptional regulator [Transcription].	6.30851e-28
CP026615.2\|AVD34730.1\|1850644_1851343_-\|alpha/beta-hydrolase	gnl\|CDD\|274612	TIGR03502, lipase_Pla1_cef, extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae.	0.000240752
CP026615.2\|AVD34731.1\|1851600_1852158_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.82601e-09
CP026615.2\|AVD34718.1\|1837795_1838989_+\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	8.79458e-175
CP026615.2\|AVD34720.1\|1840513_1841170_+\|hypothetical-protein	gnl\|CDD\|367360	pfam03154, Atrophin-1, Atrophin-1 family. Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.	2.38545e-06
CP026615.2\|AVD34732.1\|1852538_1853012_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.50449e-48
CP026615.2\|AVD34733.1\|1853304_1854072_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379530	pfam14268, YoaP, YoaP-like. The YoaP-like domain is found at the C-terminus of the B. subtilis YoaP protein. It is found in bacteria and archaea, and is approximately 40 amino acids in length. The family is found in association with pfam00583. There is a single completely conserved residue A that may be functionally important.	5.60315e-14
CP026615.2\|AVD34721.1\|1841323_1842409_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	4.292e-37
CP026615.2\|AVD34729.1\|1849191_1849659_-\|DUF2975-domain-containing-protein	gnl\|CDD\|378586	pfam11188, DUF2975, Protein of unknown function (DUF2975). This family of bacterial proteins have no known function. These proteins are likely to be integral membrane proteins. The proteins contain a highly conserved glutamic acid close to their C-terminus.	0.000275657
CP026615.2\|AVD34719.1\|1839006_1840299_+\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	5.1589e-169
CP026615.2\|AVD34724.1\|1844344_1845217_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.10432e-65
CP026615.2\|AVD34725.1\|1845369_1845555_-\|integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	3.23694e-06

>CP026615.2|AVD34725.1|1845369_1845555_-|integrase
MKIHNLRYTGASLLHLVGTNMKIVSERFCHTDLKLTMNIYSYVLEEMYKKTSNNLSKILFR
>CP026615.2|AVD34724.1|1844344_1845217_+|MurR/RpiR-family-transcriptional-regulator
MEETNEMKDSKHLISNIQSQYTRLSKGQKLIAQYILNNYDKVAFMTACKLGETVGVSESTVVRFANALGYSGYPKLQAALQELIKNKLTTVQRVEMAHDYSDDFAILNKVLKSDIDNIRSTLEEIDERAFKEASNKLLRARKIYILGMRSSFVVAQYLGFYLDIILDNVHIIRMDMGDAFEQIVRINEEDVIVAISFPRYSKKSYQIVNYAKEKGAHVISLTDSLFAPVASLADNTLLVKSNMASFVDSLVPALSISNALAISVGMKEKEDIKQHFDDLEQIWKRYSVYE
>CP026615.2|AVD34723.1|1843372_1843951_+|methyltransferase-domain-containing-protein
MAYAKYLTKITDINKFYLENIINEGDIVIDATMGNGYDTRYLAEKVGEKGFVYAFDIQEEAIKSTRKKLEKEGYTDRVKLIFDGHEKMNQYIKEEVSCVLFNLGYLPRAKHSIITKPDTTLKAIKLSLEMLKENGVISIAIYTGHDGGQEEKDCIYNLVNNLNQDEFNVLESKFLNQVNNPPQLILIEKKKA
>CP026615.2|AVD34722.1|1842599_1843316_+|rRNA-pseudouridine-synthase
MRINKYIASCGIASRRKAEEIILEGRIKVNGSIVKELFFNVDEEKDIVEFDNKKVKPSENYIYIVLNKPEGYITTVKDQFNRPSVIDILKDVKERVYPIGRLDYETSGLLILTNDGDLTYKLTHPKHEIDKTYVASVKGIISGDEIRKFETGLKIEDYTTAPAKIKVTKENKEKNYSVCEITIHEGRNRQVRKMCKAINHPVLNLRRISVGKIVLKDTKVGEYRYLTEDEIKYLKSIK
>CP026615.2|AVD34721.1|1841323_1842409_-|AI-2E-family-transporter
MIIISKENIKYYLIVVFIGILFFKFINTPSDFISSIEGFLKFFSPFLLAILLALLLNPLVMLFEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTLNRLINEMPMYTDYINSFIEKNMSNIDFLKTLIPHIQHSLDNVLKEASNFIGKISKNFLIYTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTTRNKADSIIEFFRTTHDIFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIAMTILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGVFLSVPIAAVVKTYVDKYIDNRLQ
>CP026615.2|AVD34720.1|1840513_1841170_+|hypothetical-protein
MRGRVILLISILSIFLVGCSFNKKDEINLVEQGKTYLEKHNYKKAMESLSSALEEDSTNENARAMYMQAMRMSNMTEFEELKNYEGAIKELKLIEKIKNGSSVIKEEATKKKEELTKLEKEQNEAEEQRKKKAKDTAGEDRYRVESDARKSSYSGSSKNNKSSSKNNKKSDSDKSDNNNNSSQNQEKPNSSNPTPAPTPQDTSGGSDSSGNSQNSNNQ
>CP026615.2|AVD34719.1|1839006_1840299_+|diaminopimelate-decarboxylase
MKLHGTMTVNNDELYIGGVSCLELSKKYQTPLYVFDEALVRQNCREYIKYFRAREGKNKVAYAGKAFLPLYMCNLINEEQMCLDVVSGGELYTAYKSNFPMEKVFFHGNNKTKEEINMGLDLGVGKFVVDNFYELDLLEALCEDKGKTQEIYFRITPGIEAHTHDYIKTGQIDSKFGFALVNGDLFRAIEKLSDYKNIKLVGLHAHIGSQIFDVEPYIDTVDIMMNLVKEIKEKFNIHLTEIDLGGGVGVYYSEGDKPKTIKEFCETIITKAETSCKELGIEVPTLVIEPGRSIVANAGSTLYTVGSIKDIKDVRVYVSVDGGMTDNVRPSLYQASYECSIVNKINHKAMNHVTIAGKCCESGDILIGDINIMDIKSGDILITTSTGAYGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQSYEDLLALEV
>CP026615.2|AVD34718.1|1837795_1838989_+|aspartate-kinase
MSIIVQKYGGSSVADTEKIKSIAENIIERRKENPQMVIVVSAMGKSTDEYITLAKELSNEPSKRELDALMSTGEMISASLLSIALNALGCKAISYNAYQLNIKTSGLHGKSQIDDINVNRIKNSLDEGNVVIVTGFQGINEDGDVTTLGRGGSDTSAVALAVKLNGKCEIYTDVDGIYFTDPRKYSKASKLDEIEYEEMLELASLGAQVMHSRSIELAQKYGVEIYVGRTCGTEKGTYIRGGKDMKLEDKVITGLATSDDDSSITIKDFKAENISSLFEDIATIGISVDMISQTAPILDKISVSFTVPKEELGECKKIVSKYTDEEHVVIDNNITKFSLVGLGMKNTSGVAAKVFKIFNENGIMIKLITTSEIRITCAINSDDKQVAIEKIAEVFNI
>CP026615.2|AVD34717.1|1837605_1837845_+|hypothetical-protein
MMKGYIAEEILLTDKFSGLMQNMHKAVTFKVVSYKVTWSMKFTRPKYTFGRFYLSKFSLRGRKHEYNCPKIWRKFSSRY
>CP026615.2|AVD34716.1|1836787_1837435_+|hypothetical-protein
MQIILQGECTMTNMEKEILLLISRVRCVTESQFRKIYGDQKRYNKKNFKKTLRKMCSEYTLKKYPCDVDYYNYKDLSYVYYLNGSKLFKGDDLIKALVGSELVVRINTAGCDVKRFYRNVSVDDVKYDLFIEYTDQFGNIKQVLVDVDLNNEIDISKYENLSKKIDKSTIPFFKVPNVLVVTPDNLSELNDLERYDNEYSINFIDLGLNKLFNCI
>CP026615.2|AVD34726.1|1847447_1847741_+|hypothetical-protein
MDEMIVYNKNFYPNDIFSRLDFSKIKRQLKLIDNELSDFGNICIIEKEHYTISVNSIGEINVYYDLEYENKVYGIVEEIEKLFKSQVGKFSISTYRN
>CP026615.2|AVD34727.1|1848649_1848823_-|succinate-dehydrogenase
MKRKLSTYFKGYVLGLCIAFLLFSFILKKLMISNIIGIVIGTGIAFLLICLFNKKRK
>CP026615.2|AVD34728.1|1848965_1849181_-|transcriptional-regulator
MAIVVNLDVMMAKRKISLKDLAEKIDITNANLSILKTGKAKAIRFTTLNEICKALDCQPGDILEYVEDENE
>CP026615.2|AVD34729.1|1849191_1849659_-|DUF2975-domain-containing-protein
MITKFFSNILSVFLYFLLSLLGVAGIIFLCMIPMFLYDFSSDKVIALITRILYFSDYFVVILFLIFIINSTKYSPFILENVKRFKMMGCCLLVNTIIECVVGYKSNTSLIMIFGDNSGGISPLMVISFIFALMCFVIAETFDKAIKIKKDNDLTI
>CP026615.2|AVD37736.1|1849766_1849925_-|hypothetical-protein
MLIPLLKYIISTNGIKIIYNKVKIIPISIISFNILQLIFFFIQIYHLIHSYL
>CP026615.2|AVD34730.1|1850644_1851343_-|alpha/beta-hydrolase
MEKKYFKIHGVPSILWGNPSSKLYIYIHGQCGNKEEAEAFANIAVPQECQVLSVDLPEHGERKGEKNSFDPWHVVPELVSIMEYAKCHWNQISLYANSIGAWFSMLSFEKENLRECIFVSPILDMQQLISNMMLWANVSEEQLKHELIIPTSFGHTLSWEYLQYVKQHPIIQWNVPTKILYGKHDELTEIGVVEKFVEKFNCNLTIMEDGKHWFNTPQELNSLYEWLNTLVK
>CP026615.2|AVD34731.1|1851600_1852158_+|TetR/AcrR-family-transcriptional-regulator
MRVSREIVIQATSDIVNKDGLNKVSLKVIAENLGIRTPSLYNHIESLDDLLLEVAHKGMREMNNQMTKAVIGNFGDTAIKCISIAYFNFIISNPGVYETIQWATWHGNNETLEIFDEYKSLLEKLILSCNLNTKNTGEVLNLIMSVLHGYSTLQLGKSLMSKEEAIKGLTDSIDTVLLGIHKKYD
>CP026615.2|AVD34732.1|1852538_1853012_-|GNAT-family-N-acetyltransferase
MFNEHLIRELKEDDIKDALELIWNVFEEFESPDYCDEGIMTFHQFIEYNSIIEKVKEKTLFFWGCFDCEKLIGVLAIRDLNHICMLFVDKNYHKRGVAKKLMTIGIEYCICNKFSLTEITVNSSPYAVEVYHKLGFKDTAVEQISDGIRFTPMKLLI
>CP026615.2|AVD34733.1|1853304_1854072_+|GNAT-family-N-acetyltransferase
MQIIDININNIDNEHICCSISEKKGENCVFSKKLWMKNNFDKGLVFKRFDVRGKAFIEYIPAENAWCPIIADNYMFINCFWISGKFKGKGYSNLLLQECVDDAKLKGKYGLVVLSSSKKMPFLSDAKYLKYKRFRLADTSVPNYELLYFPFTDNTPIPCFKNCVKQRKLNENGIVLYYSNQCPHTEKYALILKKIANSRGIDANLIKFETANEAQNAPAPFTAYSLFFNGEFVTNEVLSEKKIEKFLENEVKKFN
>CP026615.2|AVD34734.1|1854749_1855784_+|N-acetyl-gamma-glutamyl-phosphate-reductase
MSKIKVGIIGATGYVGAELIRLLINHDKAELTAIGSNSYVGKDIVDIYPSIGYKNNMICIENEKVIDVCDVVFTALPHGVSEKFVIKAIKSKKKVIDLGADFRIKDEEVYSKWYGVSFIDKILHKKAVYGLSEIYKDDIKDADIIANPGCYPTSISLPLMPLLSSKLIKSNNIIIDSKSGLTGAGRELSISSHFTEVNENITAYKIGKHRHTPEIEQNLSESCQEKVSVVFTPNLIPVNRGILSTIYCTKADNISINDIHRKLTDYYEFKEFIEVLPLDKVASLKNVRFSNKCVISLHENVDTLIICSAIDNMIKGAAGQAIQNMNIMFGIEENTGLKNIVPSF

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Crispr_ID: CP026615_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026615_7

1893615-1896545

Orphan

I-A

Consensus_repeat	Method
GTTTTATATTAACTATGTGGTATGTAAAG	PILER-CR
GTTTTATATTAACTATGTGGTATGTAAAG	CRISPRCasFinder
GTTTTATATTAACTATGTGGTATGTAAAG	CRT
GTTTTATATTAACTATGTGGTATGTAAAG	PILER-CR

44 spacers

csa3

The CRISPR arrays of CP026615_7

>merge|CP026615|7|1893615-1896545|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTTTATATTAACTATGTGGTATGTAAAGTAGACTGATATTCATCCATACTGATGATTCCTAAAGAAGTTTTATATTAACTATGTGGTATGTAAAGAGGGTTGAGTTCTGGCGTATTAAGAGGTGAGGAGCGTTTTATATTAACTATGTGGTATGTAAAGTGGAGAAGGTCTTGGATTAGCACCAATAGGTCATAGAGTTTTATATTAACTATGTGGTATGTAAAGAGTGAAAGCAAGGCTATTCCTAATTCTTGGAGTGGAGTTTTATATTAACTATGTGGTATGTAAAGAAATAAGTTTTGAAGCAGAATTTACACACAATAAACTAGTTTTATATTAACTATGTGGTATGTAAAGAAATAAAAGAATTAGGATTTACTCAACAATCAATTAAGTTTTATATTAACTATGTGGTATGTAAAGACCAATTTTTGTATGCTATATCACAATCTTTACTCTCGTTTTATATTAACTATGTGGTATGTAAAGTCTTCCACTTTAGGTTTATATGCTGACCTATACTTTGGTTTTATATTAACTATGTGGTATGTAAAGCTGCATTATCTACAAGTGGGTGGTTTTTTAAATTAGTGTTTTATATTAACTATGTGGTATGTAAAGAAGAAAGACAAACATGTTCAAAGTCATGTTCAAACAGTTTTATATTAACTATGTGGTATGTAAAGCGGCAAATAAGAGCAGTATATTCATCAGATTTAAATAGTTTTATATTAACTATGTGGTATGTAAAGGAGGTTGATGCTTATAGATTAAGTAAATTAGCTACTGGTTTTATATTAACTATGTGGTATGTAAAGGTTAGTGTATGTCCTGGTACTAACGCTACCTTCATTAGTTTTATATTAACTATGTGGTATGTAAAGTCATTATAACCCCAACCAACTACAGTTGCAGGGATTTGTTTTATATTAACTATGTGGTATGTAAAGTATAGCTAAATCTATTGTGGATTTAATTATTTCTGCCTCGTTTTATATTAACTATGTGGTATGTAAAGAACTCTTTTGCTATTCGTTTCACTACATTATTATCATGTTTTATATTAACTATGTGGTATGTAAAGAAAAGTAATGAGAGTTTAGAAGATAGAAGGTTTAGGAGTTTTATATTAACTATGTGGTATGTAAAGTTATTTTCTCTGATAATTCTACTAAGGTATTATTTAAAGTTTTATATTAACTATGTGGTATGTAAAGATATGACAGCACAAGGAACACCTACAGCACAAGCAGTTTTATATTAACTATGTGGTATGTAAAGAAAAACTAAAACAGTCTATGGCTATATGAAAATCTCGTTTTATATTAACTATGTGGTATGTAAAGAAGAAAATAAGACGTTCAAATCAAAAAAGACGAAGTAGTTTTATATTAACTATGTGGTATGTAAAGTCTATTCCAACATAAAGATACAAAGTAGTTTCTTTTTGTTTTATATTAACTATGTGGTATGTAAAGAAACAAATCATCACACAAGCAATTATTATGCTTACTAAGTTTTATATTAACTATGTGGTATGTAAAGGTCGTAAAACTTAAAGATGAAACAAAAGGAATGATTGTTTTATATTAACTATGTGGTATGTAAAGAGATTCGACGGAGAACTTTTATCTAATAAAGAAAAACGTTTTATATTAACTATGTGGTATGTAAAGATCACCTGGTGATATACCCCTCTATCATCTCCTGCTAGTTTTATATTAACTATGTGGTATGTAAAGTGGTTTGTTGCAACATATGTGTTCCTTCAACATATCCGTTTTATATTAACTATGTGGTATGTAAAGGAATCTGGAGCAGGTTTATAAGTTTCTGGATAGCTAGAGTTTTATATTAACTATGTGGTATGTAAAGAAAAAATATAAAAGAGCTAAGCACATGAAGGATAATGTTTTATATTAACTATGTGGTATGTAAAGTATGTTAAATTTGTTGATGAATTATATCCCAATTTTTAGTTTTATATTAACTATGTGGTATGTAAAGCACCTCTCACTACTATAGAATCTTTATCAACGCTAAGTTTTATATTAACTATGTGGTATGTAAAGGGAAGTATAATTTTTACTTTATCTCCATACTCAAAAAGTTTTATATTAACTATGTGGTATGTAAAGTGTATTGAGGGGTCGAAAATAAGTGTGTTCAAACTTAGTTTTATATTAACTATGTGGTATGTAAAGTTTGTAAATGTAACAGTTTTATCTAACATTTTACCGCGTTTTATATTAACTATGTGGTATGTAAAGGTATTTAGATATTGCAAGTAAATTACCTTCGGTATCGTTTTATATTAACTATGTGGTATGTAAAGTTTCATCTAATACCTCCTTGTTTTATCAAGAGGGTTAAGTTTTATATTAACTATGTGGTATGTAAAGATTAATTCAGAACTTGCACAGTTGTATATAGAACTTGTTTTATATTAACTATGTGGTATGTAAAGATATTCATATACTACATATTCTTTTCCTTCATCATTAAGTTTTATATTAACTATGTGGTATGTAAAGAGGTCTAAAATTTGTATTTAGACATACTAAGTTATTTGTTTTATATTAACTATGTGGTATGTAAAGTCACAAAAACAAGGAATACTTAAGTTAGCATCAATGAGTTTTATATTAACTATGTGGTATGTAAAGTAGAGTATTGTTCTACAATTATATTTCCAACTGAACTGTTTTATATTAACTATGTGGTATGTAAAGTGAAGTTTTCTTTTAAATTATCATCCTGTATAGCCTTGTTTTATATTAACTATGTGGTATGTAAAGATACAGGAACAGGAGTCGGAACAGAAAAAAACGCCTCATTTTATATTAACTATGTGGTATGTAAAGGTTGTATTACCTCTGTAATTATTTTTTCCAAAATTACGCTTTATATTAACTAAGTGGTGAATTTAA

>CP026615|7|4|1893615-1896082|PILER-CR
GTTTTATATTAACTATGTGGTATGTAAAG	TAGACTGATATTCATCCATACTGATGATTCCTAAAGAA
GTTTTATATTAACTATGTGGTATGTAAAG	AGGGTTGAGTTCTGGCGTATTAAGAGGTGAGGAGC
GTTTTATATTAACTATGTGGTATGTAAAG	TGGAGAAGGTCTTGGATTAGCACCAATAGGTCATAGA
GTTTTATATTAACTATGTGGTATGTAAAG	AGTGAAAGCAAGGCTATTCCTAATTCTTGGAGTGGA
GTTTTATATTAACTATGTGGTATGTAAAG	AAATAAGTTTTGAAGCAGAATTTACACACAATAAACTA
GTTTTATATTAACTATGTGGTATGTAAAG	AAATAAAAGAATTAGGATTTACTCAACAATCAATTAA
GTTTTATATTAACTATGTGGTATGTAAAG	ACCAATTTTTGTATGCTATATCACAATCTTTACTCTC
GTTTTATATTAACTATGTGGTATGTAAAG	TCTTCCACTTTAGGTTTATATGCTGACCTATACTTTG
GTTTTATATTAACTATGTGGTATGTAAAG	CTGCATTATCTACAAGTGGGTGGTTTTTTAAATTAGT
GTTTTATATTAACTATGTGGTATGTAAAG	AAGAAAGACAAACATGTTCAAAGTCATGTTCAAACA
GTTTTATATTAACTATGTGGTATGTAAAG	CGGCAAATAAGAGCAGTATATTCATCAGATTTAAATA
GTTTTATATTAACTATGTGGTATGTAAAG	GAGGTTGATGCTTATAGATTAAGTAAATTAGCTACTG
GTTTTATATTAACTATGTGGTATGTAAAG	GTTAGTGTATGTCCTGGTACTAACGCTACCTTCATTA
GTTTTATATTAACTATGTGGTATGTAAAG	TCATTATAACCCCAACCAACTACAGTTGCAGGGATTT
GTTTTATATTAACTATGTGGTATGTAAAG	TATAGCTAAATCTATTGTGGATTTAATTATTTCTGCCTC
GTTTTATATTAACTATGTGGTATGTAAAG	AACTCTTTTGCTATTCGTTTCACTACATTATTATCAT
GTTTTATATTAACTATGTGGTATGTAAAG	AAAAGTAATGAGAGTTTAGAAGATAGAAGGTTTAGGA
GTTTTATATTAACTATGTGGTATGTAAAG	TTATTTTCTCTGATAATTCTACTAAGGTATTATTTAAA
GTTTTATATTAACTATGTGGTATGTAAAG	ATATGACAGCACAAGGAACACCTACAGCACAAGCA
GTTTTATATTAACTATGTGGTATGTAAAG	AAAAACTAAAACAGTCTATGGCTATATGAAAATCTC
GTTTTATATTAACTATGTGGTATGTAAAG	AAGAAAATAAGACGTTCAAATCAAAAAAGACGAAGTA
GTTTTATATTAACTATGTGGTATGTAAAG	TCTATTCCAACATAAAGATACAAAGTAGTTTCTTTTT
GTTTTATATTAACTATGTGGTATGTAAAG	AAACAAATCATCACACAAGCAATTATTATGCTTACTAA
GTTTTATATTAACTATGTGGTATGTAAAG	GTCGTAAAACTTAAAGATGAAACAAAAGGAATGATT
GTTTTATATTAACTATGTGGTATGTAAAG	AGATTCGACGGAGAACTTTTATCTAATAAAGAAAAAC
GTTTTATATTAACTATGTGGTATGTAAAG	ATCACCTGGTGATATACCCCTCTATCATCTCCTGCTA
GTTTTATATTAACTATGTGGTATGTAAAG	TGGTTTGTTGCAACATATGTGTTCCTTCAACATATCC
GTTTTATATTAACTATGTGGTATGTAAAG	GAATCTGGAGCAGGTTTATAAGTTTCTGGATAGCTAGA
GTTTTATATTAACTATGTGGTATGTAAAG	AAAAAATATAAAAGAGCTAAGCACATGAAGGATAAT
GTTTTATATTAACTATGTGGTATGTAAAG	TATGTTAAATTTGTTGATGAATTATATCCCAATTTTTA
GTTTTATATTAACTATGTGGTATGTAAAG	CACCTCTCACTACTATAGAATCTTTATCAACGCTAA
GTTTTATATTAACTATGTGGTATGTAAAG	GGAAGTATAATTTTTACTTTATCTCCATACTCAAAAA
GTTTTATATTAACTATGTGGTATGTAAAG	TGTATTGAGGGGTCGAAAATAAGTGTGTTCAAACTTA
GTTTTATATTAACTATGTGGTATGTAAAG	TTTGTAAATGTAACAGTTTTATCTAACATTTTACCGC
GTTTTATATTAACTATGTGGTATGTAAAG	GTATTTAGATATTGCAAGTAAATTACCTTCGGTATC
GTTTTATATTAACTATGTGGTATGTAAAG	TTTCATCTAATACCTCCTTGTTTTATCAAGAGGGTTAA
GTTTTATATTAACTATGTGGTATGTAAAG	ATTAATTCAGAACTTGCACAGTTGTATATAGAACTT
GTTTTATATTAACTATGTGGTATGTAAAGATATTCATATACTACATATTCTTTTCCTTCATCATTAAGTTTTATATTAACTATGTGGTATGTAAAG	AGGTCTAAAATTTGTATTTAGACATACTAAGTTATTT
GTTTTATATTAACTATGTGGTATGTAAAG	TCACAAAAACAAGGAATACTTAAGTTAGCATCAATGA
GTTTTATATTAACTATGTGGTATGTAAAG	TAGAGTATTGTTCTACAATTATATTTCCAACTGAACT
GTTTTATATTAACTATGTGGTATGTAAAG	TGAAGTTTTCTTTTAAATTATCATCCTGTATAGCCTT
GTTTTATATTAACTATGTGGTATGTAAAG	ATACAGGAACAGGAGTCGGAACAGAAAAAAACGCCTC


>CP026615|7|7|1893615-1896545|CRISPRCasFinder
GTTTTATATTAACTATGTGGTATGTAAAG	TAGACTGATATTCATCCATACTGATGATTCCTAAAGAA
GTTTTATATTAACTATGTGGTATGTAAAG	AGGGTTGAGTTCTGGCGTATTAAGAGGTGAGGAGC
GTTTTATATTAACTATGTGGTATGTAAAG	TGGAGAAGGTCTTGGATTAGCACCAATAGGTCATAGA
GTTTTATATTAACTATGTGGTATGTAAAG	AGTGAAAGCAAGGCTATTCCTAATTCTTGGAGTGGA
GTTTTATATTAACTATGTGGTATGTAAAG	AAATAAGTTTTGAAGCAGAATTTACACACAATAAACTA
GTTTTATATTAACTATGTGGTATGTAAAG	AAATAAAAGAATTAGGATTTACTCAACAATCAATTAA
GTTTTATATTAACTATGTGGTATGTAAAG	ACCAATTTTTGTATGCTATATCACAATCTTTACTCTC
GTTTTATATTAACTATGTGGTATGTAAAG	TCTTCCACTTTAGGTTTATATGCTGACCTATACTTTG
GTTTTATATTAACTATGTGGTATGTAAAG	CTGCATTATCTACAAGTGGGTGGTTTTTTAAATTAGT
GTTTTATATTAACTATGTGGTATGTAAAG	AAGAAAGACAAACATGTTCAAAGTCATGTTCAAACA
GTTTTATATTAACTATGTGGTATGTAAAG	CGGCAAATAAGAGCAGTATATTCATCAGATTTAAATA
GTTTTATATTAACTATGTGGTATGTAAAG	GAGGTTGATGCTTATAGATTAAGTAAATTAGCTACTG
GTTTTATATTAACTATGTGGTATGTAAAG	GTTAGTGTATGTCCTGGTACTAACGCTACCTTCATTA
GTTTTATATTAACTATGTGGTATGTAAAG	TCATTATAACCCCAACCAACTACAGTTGCAGGGATTT
GTTTTATATTAACTATGTGGTATGTAAAG	TATAGCTAAATCTATTGTGGATTTAATTATTTCTGCCTC
GTTTTATATTAACTATGTGGTATGTAAAG	AACTCTTTTGCTATTCGTTTCACTACATTATTATCAT
GTTTTATATTAACTATGTGGTATGTAAAG	AAAAGTAATGAGAGTTTAGAAGATAGAAGGTTTAGGA
GTTTTATATTAACTATGTGGTATGTAAAG	TTATTTTCTCTGATAATTCTACTAAGGTATTATTTAAA
GTTTTATATTAACTATGTGGTATGTAAAG	ATATGACAGCACAAGGAACACCTACAGCACAAGCA
GTTTTATATTAACTATGTGGTATGTAAAG	AAAAACTAAAACAGTCTATGGCTATATGAAAATCTC
GTTTTATATTAACTATGTGGTATGTAAAG	AAGAAAATAAGACGTTCAAATCAAAAAAGACGAAGTA
GTTTTATATTAACTATGTGGTATGTAAAG	TCTATTCCAACATAAAGATACAAAGTAGTTTCTTTTT
GTTTTATATTAACTATGTGGTATGTAAAG	AAACAAATCATCACACAAGCAATTATTATGCTTACTAA
GTTTTATATTAACTATGTGGTATGTAAAG	GTCGTAAAACTTAAAGATGAAACAAAAGGAATGATT
GTTTTATATTAACTATGTGGTATGTAAAG	AGATTCGACGGAGAACTTTTATCTAATAAAGAAAAAC
GTTTTATATTAACTATGTGGTATGTAAAG	ATCACCTGGTGATATACCCCTCTATCATCTCCTGCTA
GTTTTATATTAACTATGTGGTATGTAAAG	TGGTTTGTTGCAACATATGTGTTCCTTCAACATATCC
GTTTTATATTAACTATGTGGTATGTAAAG	GAATCTGGAGCAGGTTTATAAGTTTCTGGATAGCTAGA
GTTTTATATTAACTATGTGGTATGTAAAG	AAAAAATATAAAAGAGCTAAGCACATGAAGGATAAT
GTTTTATATTAACTATGTGGTATGTAAAG	TATGTTAAATTTGTTGATGAATTATATCCCAATTTTTA
GTTTTATATTAACTATGTGGTATGTAAAG	CACCTCTCACTACTATAGAATCTTTATCAACGCTAA
GTTTTATATTAACTATGTGGTATGTAAAG	GGAAGTATAATTTTTACTTTATCTCCATACTCAAAAA
GTTTTATATTAACTATGTGGTATGTAAAG	TGTATTGAGGGGTCGAAAATAAGTGTGTTCAAACTTA
GTTTTATATTAACTATGTGGTATGTAAAG	TTTGTAAATGTAACAGTTTTATCTAACATTTTACCGC
GTTTTATATTAACTATGTGGTATGTAAAG	GTATTTAGATATTGCAAGTAAATTACCTTCGGTATC
GTTTTATATTAACTATGTGGTATGTAAAG	TTTCATCTAATACCTCCTTGTTTTATCAAGAGGGTTAA
GTTTTATATTAACTATGTGGTATGTAAAG	ATTAATTCAGAACTTGCACAGTTGTATATAGAACTT
GTTTTATATTAACTATGTGGTATGTAAAG	ATATTCATATACTACATATTCTTTTCCTTCATCATTAA
GTTTTATATTAACTATGTGGTATGTAAAG	AGGTCTAAAATTTGTATTTAGACATACTAAGTTATTT
GTTTTATATTAACTATGTGGTATGTAAAG	TCACAAAAACAAGGAATACTTAAGTTAGCATCAATGA
GTTTTATATTAACTATGTGGTATGTAAAG	TAGAGTATTGTTCTACAATTATATTTCCAACTGAACT
GTTTTATATTAACTATGTGGTATGTAAAG	TGAAGTTTTCTTTTAAATTATCATCCTGTATAGCCTT
GTTTTATATTAACTATGTGGTATGTAAAG	ATACAGGAACAGGAGTCGGAACAGAAAAAAACGCCTC
ATTTTATATTAACTATGTGGTATGTAAAG	GTTGTATTACCTCTGTAATTATTTTTTCCAAAATTAC
GCTTTATATTAACTAAGTGGTGAATTTAA

>CP026615|7|4|1893615-1896545|CRT
GTTTTATATTAACTATGTGGTATGTAAAG	TAGACTGATATTCATCCATACTGATGATTCCTAAAGAA
GTTTTATATTAACTATGTGGTATGTAAAG	AGGGTTGAGTTCTGGCGTATTAAGAGGTGAGGAGC
GTTTTATATTAACTATGTGGTATGTAAAG	TGGAGAAGGTCTTGGATTAGCACCAATAGGTCATAGA
GTTTTATATTAACTATGTGGTATGTAAAG	AGTGAAAGCAAGGCTATTCCTAATTCTTGGAGTGGA
GTTTTATATTAACTATGTGGTATGTAAAG	AAATAAGTTTTGAAGCAGAATTTACACACAATAAACTA
GTTTTATATTAACTATGTGGTATGTAAAG	AAATAAAAGAATTAGGATTTACTCAACAATCAATTAA
GTTTTATATTAACTATGTGGTATGTAAAG	ACCAATTTTTGTATGCTATATCACAATCTTTACTCTC
GTTTTATATTAACTATGTGGTATGTAAAG	TCTTCCACTTTAGGTTTATATGCTGACCTATACTTTG
GTTTTATATTAACTATGTGGTATGTAAAG	CTGCATTATCTACAAGTGGGTGGTTTTTTAAATTAGT
GTTTTATATTAACTATGTGGTATGTAAAG	AAGAAAGACAAACATGTTCAAAGTCATGTTCAAACA
GTTTTATATTAACTATGTGGTATGTAAAG	CGGCAAATAAGAGCAGTATATTCATCAGATTTAAATA
GTTTTATATTAACTATGTGGTATGTAAAG	GAGGTTGATGCTTATAGATTAAGTAAATTAGCTACTG
GTTTTATATTAACTATGTGGTATGTAAAG	GTTAGTGTATGTCCTGGTACTAACGCTACCTTCATTA
GTTTTATATTAACTATGTGGTATGTAAAG	TCATTATAACCCCAACCAACTACAGTTGCAGGGATTT
GTTTTATATTAACTATGTGGTATGTAAAG	TATAGCTAAATCTATTGTGGATTTAATTATTTCTGCCTC
GTTTTATATTAACTATGTGGTATGTAAAG	AACTCTTTTGCTATTCGTTTCACTACATTATTATCAT
GTTTTATATTAACTATGTGGTATGTAAAG	AAAAGTAATGAGAGTTTAGAAGATAGAAGGTTTAGGA
GTTTTATATTAACTATGTGGTATGTAAAG	TTATTTTCTCTGATAATTCTACTAAGGTATTATTTAAA
GTTTTATATTAACTATGTGGTATGTAAAG	ATATGACAGCACAAGGAACACCTACAGCACAAGCA
GTTTTATATTAACTATGTGGTATGTAAAG	AAAAACTAAAACAGTCTATGGCTATATGAAAATCTC
GTTTTATATTAACTATGTGGTATGTAAAG	AAGAAAATAAGACGTTCAAATCAAAAAAGACGAAGTA
GTTTTATATTAACTATGTGGTATGTAAAG	TCTATTCCAACATAAAGATACAAAGTAGTTTCTTTTT
GTTTTATATTAACTATGTGGTATGTAAAG	AAACAAATCATCACACAAGCAATTATTATGCTTACTAA
GTTTTATATTAACTATGTGGTATGTAAAG	GTCGTAAAACTTAAAGATGAAACAAAAGGAATGATT
GTTTTATATTAACTATGTGGTATGTAAAG	AGATTCGACGGAGAACTTTTATCTAATAAAGAAAAAC
GTTTTATATTAACTATGTGGTATGTAAAG	ATCACCTGGTGATATACCCCTCTATCATCTCCTGCTA
GTTTTATATTAACTATGTGGTATGTAAAG	TGGTTTGTTGCAACATATGTGTTCCTTCAACATATCC
GTTTTATATTAACTATGTGGTATGTAAAG	GAATCTGGAGCAGGTTTATAAGTTTCTGGATAGCTAGA
GTTTTATATTAACTATGTGGTATGTAAAG	AAAAAATATAAAAGAGCTAAGCACATGAAGGATAAT
GTTTTATATTAACTATGTGGTATGTAAAG	TATGTTAAATTTGTTGATGAATTATATCCCAATTTTTA
GTTTTATATTAACTATGTGGTATGTAAAG	CACCTCTCACTACTATAGAATCTTTATCAACGCTAA
GTTTTATATTAACTATGTGGTATGTAAAG	GGAAGTATAATTTTTACTTTATCTCCATACTCAAAAA
GTTTTATATTAACTATGTGGTATGTAAAG	TGTATTGAGGGGTCGAAAATAAGTGTGTTCAAACTTA
GTTTTATATTAACTATGTGGTATGTAAAG	TTTGTAAATGTAACAGTTTTATCTAACATTTTACCGC
GTTTTATATTAACTATGTGGTATGTAAAG	GTATTTAGATATTGCAAGTAAATTACCTTCGGTATC
GTTTTATATTAACTATGTGGTATGTAAAG	TTTCATCTAATACCTCCTTGTTTTATCAAGAGGGTTAA
GTTTTATATTAACTATGTGGTATGTAAAG	ATTAATTCAGAACTTGCACAGTTGTATATAGAACTT
GTTTTATATTAACTATGTGGTATGTAAAG	ATATTCATATACTACATATTCTTTTCCTTCATCATTAA
GTTTTATATTAACTATGTGGTATGTAAAG	AGGTCTAAAATTTGTATTTAGACATACTAAGTTATTT
GTTTTATATTAACTATGTGGTATGTAAAG	TCACAAAAACAAGGAATACTTAAGTTAGCATCAATGA
GTTTTATATTAACTATGTGGTATGTAAAG	TAGAGTATTGTTCTACAATTATATTTCCAACTGAACT
GTTTTATATTAACTATGTGGTATGTAAAG	TGAAGTTTTCTTTTAAATTATCATCCTGTATAGCCTT
GTTTTATATTAACTATGTGGTATGTAAAG	ATACAGGAACAGGAGTCGGAACAGAAAAAAACGCCTC
ATTTTATATTAACTATGTGGTATGTAAAG	GTTGTATTACCTCTGTAATTATTTTTTCCAAAATTAC
GCTTTATATTAACTAAGTGGTGAATTTAA

>CP026615|7|5|1896121-1896479|PILER-CR
	TAGACTGATATTCATCCATACTGATGATTCCTAAAGAA
GTTTTATATTAACTATGTGGTATGTAAAG	AGGGTTGAGTTCTGGCGTATTAAGAGGTGAGGAGC
GTTTTATATTAACTATGTGGTATGTAAAG	TGGAGAAGGTCTTGGATTAGCACCAATAGGTCATAGA
GTTTTATATTAACTATGTGGTATGTAAAG	AGTGAAAGCAAGGCTATTCCTAATTCTTGGAGTGGA
GTTTTATATTAACTATGTGGTATGTAAAG	AAATAAGTTTTGAAGCAGAATTTACACACAATAAACTA
GTTTTATATTAACTATGTGGTATGTAAAG	AAATAAAAGAATTAGGATTTACTCAACAATCAATTAA
GTTTTATATTAACTATGTGGTATGTAAAG	ACCAATTTTTGTATGCTATATCACAATCTTTACTCTC
GTTTTATATTAACTATGTGGTATGTAAAG	TCTTCCACTTTAGGTTTATATGCTGACCTATACTTTG
GTTTTATATTAACTATGTGGTATGTAAAG	CTGCATTATCTACAAGTGGGTGGTTTTTTAAATTAGT
GTTTTATATTAACTATGTGGTATGTAAAG	AAGAAAGACAAACATGTTCAAAGTCATGTTCAAACA
GTTTTATATTAACTATGTGGTATGTAAAG	CGGCAAATAAGAGCAGTATATTCATCAGATTTAAATA
GTTTTATATTAACTATGTGGTATGTAAAG	GAGGTTGATGCTTATAGATTAAGTAAATTAGCTACTG
GTTTTATATTAACTATGTGGTATGTAAAG	GTTAGTGTATGTCCTGGTACTAACGCTACCTTCATTA
GTTTTATATTAACTATGTGGTATGTAAAG	TCATTATAACCCCAACCAACTACAGTTGCAGGGATTT
GTTTTATATTAACTATGTGGTATGTAAAG	TATAGCTAAATCTATTGTGGATTTAATTATTTCTGCCTC
GTTTTATATTAACTATGTGGTATGTAAAG	AACTCTTTTGCTATTCGTTTCACTACATTATTATCAT
GTTTTATATTAACTATGTGGTATGTAAAG	AAAAGTAATGAGAGTTTAGAAGATAGAAGGTTTAGGA
GTTTTATATTAACTATGTGGTATGTAAAG	TTATTTTCTCTGATAATTCTACTAAGGTATTATTTAAA
GTTTTATATTAACTATGTGGTATGTAAAG	ATATGACAGCACAAGGAACACCTACAGCACAAGCA
GTTTTATATTAACTATGTGGTATGTAAAG	AAAAACTAAAACAGTCTATGGCTATATGAAAATCTC
GTTTTATATTAACTATGTGGTATGTAAAG	AAGAAAATAAGACGTTCAAATCAAAAAAGACGAAGTA
GTTTTATATTAACTATGTGGTATGTAAAG	TCTATTCCAACATAAAGATACAAAGTAGTTTCTTTTT
GTTTTATATTAACTATGTGGTATGTAAAG	AAACAAATCATCACACAAGCAATTATTATGCTTACTAA
GTTTTATATTAACTATGTGGTATGTAAAG	GTCGTAAAACTTAAAGATGAAACAAAAGGAATGATT
GTTTTATATTAACTATGTGGTATGTAAAG	AGATTCGACGGAGAACTTTTATCTAATAAAGAAAAAC
GTTTTATATTAACTATGTGGTATGTAAAG	ATCACCTGGTGATATACCCCTCTATCATCTCCTGCTA
GTTTTATATTAACTATGTGGTATGTAAAG	TGGTTTGTTGCAACATATGTGTTCCTTCAACATATCC
GTTTTATATTAACTATGTGGTATGTAAAG	GAATCTGGAGCAGGTTTATAAGTTTCTGGATAGCTAGA
GTTTTATATTAACTATGTGGTATGTAAAG	AAAAAATATAAAAGAGCTAAGCACATGAAGGATAAT
GTTTTATATTAACTATGTGGTATGTAAAG	TATGTTAAATTTGTTGATGAATTATATCCCAATTTTTA
GTTTTATATTAACTATGTGGTATGTAAAG	CACCTCTCACTACTATAGAATCTTTATCAACGCTAA
GTTTTATATTAACTATGTGGTATGTAAAG	GGAAGTATAATTTTTACTTTATCTCCATACTCAAAAA
GTTTTATATTAACTATGTGGTATGTAAAG	TGTATTGAGGGGTCGAAAATAAGTGTGTTCAAACTTA
GTTTTATATTAACTATGTGGTATGTAAAG	TTTGTAAATGTAACAGTTTTATCTAACATTTTACCGC
GTTTTATATTAACTATGTGGTATGTAAAG	GTATTTAGATATTGCAAGTAAATTACCTTCGGTATC
GTTTTATATTAACTATGTGGTATGTAAAG	TTTCATCTAATACCTCCTTGTTTTATCAAGAGGGTTAA
GTTTTATATTAACTATGTGGTATGTAAAG	ATTAATTCAGAACTTGCACAGTTGTATATAGAACTT
GTTTTATATTAACTATGTGGTATGTAAAGATATTCATATACTACATATTCTTTTCCTTCATCATTAAGTTTTATATTAACTATGTGGTATGTAAAG	AGGTCTAAAATTTGTATTTAGACATACTAAGTTATTT
GTTTTATATTAACTATGTGGTATGTAAAG	TCACAAAAACAAGGAATACTTAAGTTAGCATCAATGA
GTTTTATATTAACTATGTGGTATGTAAAG	TAGAGTATTGTTCTACAATTATATTTCCAACTGAACT
GTTTTATATTAACTATGTGGTATGTAAAG	TGAAGTTTTCTTTTAAATTATCATCCTGTATAGCCTT
GTTTTATATTAACTATGTGGTATGTAAAG	ATACAGGAACAGGAGTCGGAACAGAAAAAAACGCCTC
ATTTTATATTAACTATGTGGTATGTAAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP026615.2\|AVD34777.1\|1901217_1901589_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34772.1\|1897855_1898113_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD37737.1\|1887541_1887601_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AXL65828.1\|1890420_1891266_-\|DUF4878-domain-containing-protein	unknown	unknown	gnl\|CDD\|379023
CP026615.2\|AVD34774.1\|1899279_1899402_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34776.1\|1900202_1900775_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378443
CP026615.2\|AVD34766.1\|1890032_1890197_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34778.1\|1901727_1901985_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34762.1\|1886273_1887026_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182593
CP026615.2\|AVD34779.1\|1902307_1902592_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34773.1\|1898105_1898486_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34768.1\|1892421_1892664_-\|integrase	unknown	unknown	unknown
CP026615.2\|AVD34763.1\|1887236_1887371_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34771.1\|1897635_1897869_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34775.1\|1899484_1899859_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34767.1\|1891810_1892356_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
CP026615.2\|AVD34769.1\|1893183_1893336_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD34764.1\|1887991_1888288_+\|ArsR-family-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
CP026615.2\|AVD34770.1\|1897259_1897448_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
CP026615.2\|AVD34765.1\|1888268_1888910_+\|DUF1648-domain-containing-protein	unknown	unknown	gnl\|CDD\|227945

Protein	Function_ID	Function_description	E-value
CP026615.2\|AVD34770.1\|1897259_1897448_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	5.68544e-09
CP026615.2\|AVD34776.1\|1900202_1900775_+\|hypothetical-protein	gnl\|CDD\|378443	pfam10543, ORF6N, ORF6N domain. This domain was identified by Iyer and colleagues.	1.73523e-06
CP026615.2\|AXL65828.1\|1890420_1891266_-\|DUF4878-domain-containing-protein	gnl\|CDD\|379023	pfam13026, DUF3887, Protein of unknown function (DUF3887). This domain family is found in bacteria and archaea, and is approximately 90 amino acids in length.	0.000618735
CP026615.2\|AVD34767.1\|1891810_1892356_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	5.0141e-35
CP026615.2\|AVD34764.1\|1887991_1888288_+\|ArsR-family-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	8.20037e-22
CP026615.2\|AVD34762.1\|1886273_1887026_+\|hypothetical-protein	gnl\|CDD\|182593	PRK10621, PRK10621, hypothetical protein; Provisional.	3.81929e-48
CP026615.2\|AVD34765.1\|1888268_1888910_+\|DUF1648-domain-containing-protein	gnl\|CDD\|227945	COG5658, COG5658, Predicted integral membrane protein [Function unknown].	6.53198e-19

>CP026615.2|AVD34769.1|1893183_1893336_+|hypothetical-protein
MDNFLQGILASLVASLIVYLTSKLFKKVKSHSGRSDFSFELEIKFKKNKH
>CP026615.2|AVD34768.1|1892421_1892664_-|integrase
MRNRQGIIKNQTFFEDVKLIDITPNLLKIYVNKIYKKYSLNSAKNSIGFLNPLLHEAYILREIQEDVSKFVITSSKKIHL
>CP026615.2|AVD34767.1|1891810_1892356_-|site-specific-integrase
MPIYLMLTLGLHFGEAVSLRWCDVELDEGIINIKQTMIYVREKVTFKSPKTEKSKRILTTPIELINLLKEEKIRQNKLKLQDILKNELDLICLNKYFRPWKQQMFFRLFNRLLEKNNLRYIKLHELRHTNATLMLLSGTNIKTISERLCHADIKITMNRYSLVLEDIDREASDNLSKILFK
>CP026615.2|AXL65828.1|1890420_1891266_-|DUF4878-domain-containing-protein
MNITKRMTLLLTLLIVILITGCSPKESASEVAKKYIDKMNSGDYETAYSLLSKDSKKKISLENLEDFQNILVSTKRIISYKIGKEKIIKKYKHDGKEYKNVVKLEETFNIKNLLYKKDDSLKVNRYFVVENNKYKLLLYESFKKEFGINSMDLAQLKLNDFGLKYFKEVDLILKKAIAINPTDSTLYYAQACNYMNFDGFPDYPDATYNALDSINKSLKYLDKNDSDYKKNASNIYNLKGVILMFHKRFDEAQQDLNKSLYFNKDNEDPKSNLNTIKKHLK
>CP026615.2|AVD34766.1|1890032_1890197_+|hypothetical-protein
MFGKPKESVRFLDFNDVAEKFGEKKAVAIFDAIAGKKSKEHIIKDIEKLVKNEV
>CP026615.2|AVD34765.1|1888268_1888910_+|DUF1648-domain-containing-protein
MKKAINKQFILSTLICFIPFIVSIYFYNRLPNEVAIHFDNYGNPDNYAPKVIAAFGVPLLMLCIHLYTWFRLENEPKKANFSNVIQNLSKWGVAILSVILQIMMVLYSTGVSLESNFYTGLILGIIVILFGNYLPKCKQNYSVGIILPWTLNDEDNWNKTHHLAGWIWLIGGILLIINAFINIPFYNIFVIFVIVILPFIYSYLMYKISGKNN
>CP026615.2|AVD34764.1|1887991_1888288_+|ArsR-family-transcriptional-regulator
MLGFPETFKALSDPIRREILVMLRENKMSAGEISEKFNMTNATISYHLSQLKKAGLIFETKYKNFIFYEINISVFEEVMLWFSQFMEKGEKDNEKSDK
>CP026615.2|AVD37737.1|1887541_1887601_-|hypothetical-protein
MVEYIYYYNNKRIKKIKLE
>CP026615.2|AVD34763.1|1887236_1887371_+|hypothetical-protein
MNISRRAMKIIELAQKIANKRGVTVQDAWNDAMKEYKEKYEYVA
>CP026615.2|AVD34762.1|1886273_1887026_+|hypothetical-protein
MFAIIFLCIGGFLAAFVDSIAGGGGLISMPVLMAIGVPVHLAIGTNKFAASAGCISSAYRYAKSGKVNNDLLKKLVPFTIVGSILGVRCVLSISEDILNVLVVVMILIVAIYTFTSKNLGQEDNFESINNKNLRLGMLMAFIMGFYDGFFGPGTGTFLTFGFIKIYGYDFLHASANTKILNLTSNITSLLLFMINGQVDYKIAIVFALVMIMGAYIGAKVAIKKGSKMIKPIFLVMALFMVVKLVYQTLV
>CP026615.2|AVD34770.1|1897259_1897448_-|XRE-family-transcriptional-regulator
MTLQDRIKEERLKLGLNQVELSKKFNMTKQTVSNWESENRIQDTLMLTKLADFLCISRFSLG
>CP026615.2|AVD34771.1|1897635_1897869_+|hypothetical-protein
MNTKKTKGIYKNGGLKVSRTAICSVCGELLVDGYGDEFTNTKIIDLHGREFVIIIYKNCLEELLRKCANGGISNDNN
>CP026615.2|AVD34772.1|1897855_1898113_+|hypothetical-protein
MIIIRSQDRLDLMRVNRVEIDSKYVYAVFGEESNVREIGRYKSEERAIEVLSRIQDAIIAGTKFDIIKKDGVRYYKEKVFEMPVE
>CP026615.2|AVD34773.1|1898105_1898486_+|hypothetical-protein
MNKEGSEMLKVEKYFSGSLGINIIEDDPTCRNYLALYCCLVGIERKGKKVIPRIDSMLSEFGVKSRCKRPHNNKLIRLINVKTGEVKEFKSIDSTACFLGLKQPAVSHILKRKTPSRSGWRAEYIK
>CP026615.2|AVD34774.1|1899279_1899402_+|hypothetical-protein
MKRRRCSWCGKLFYLKEKSKEVYCYKECKKKANRVKSFND
>CP026615.2|AVD34775.1|1899484_1899859_-|hypothetical-protein
MTIFSYLQASNTFIILSIILGVLMAINDNKKQLLKFKILNYCFFICMSISYIFSFLVFFQDFNSNILEIIANILSIILLIACNRVSTKNALNSSLYTLLAFWFSPLFAIILLFWIHNPHKYLNS
>CP026615.2|AVD34776.1|1900202_1900775_+|hypothetical-protein
MNENLSKEIKILGTIEVEEMKFHDIEGGFGVGKKSMSVKDIDEIHNGKLKDINKNINNNRKRFKDMINTLDLKVSDLKSLSLEMGYSNQSYANANNIYLLPERDYSKRLKILEGKQYEKIVDGYFSMRKELNNPLLSASKELQAIFMLDKKQEFLETKIESVNEKLENFMDDAPLFNIEFESIVKIVLWK
>CP026615.2|AVD34777.1|1901217_1901589_+|hypothetical-protein
MKKQIMALGLTGLIGLGGLGLLANKSFADTPNKLKGDTTVAQGLNKNATAKDVTEQVDTTIGKGLDKNAIVKDVVENNGEKSDTTVAPGLDKNATVKDTAEKGNTTIAPGLDKNTIVKDIVVK
>CP026615.2|AVD34778.1|1901727_1901985_+|hypothetical-protein
MVKCTKLIGGVITMKKNILGVLLPLLTMIIIFVLSFENIITNSLGLSDMDIKGILISGVVLYIPVSFLVNGIICAKKQIKWKISK
>CP026615.2|AVD34779.1|1902307_1902592_+|hypothetical-protein
MTFEVEFYTFEGINMEAEMYVQVAMMASKVVKITGVDEVIKKLVKKFLNNKVEEALGKQRSKKELKLIENNFNEYMERSYKNYIYMNTIVFRNQ

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Crispr_ID: CP026615_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026615_8

2347809-2348957

TypeV

I-A

Consensus_repeat	Method
GTTTTATATTAACTATGTGGTATGTAAAT	PILER-CR
ATTTACATACCACATAGTTAATATAAAAC	CRISPRCasFinder
ATTTACATACCACATAGTTAATATAAAAC	CRT

17 spacers

cas14j

The CRISPR arrays of CP026615_8

>merge|CP026615|8|2347809-2348957|PILER-CR,CRISPRCasFinder,CRT
ATTTACATACCACATAGTTAATATAAAACATTCGCAAGTTCTTAATCAAAAACCCAATTTTCTTTATTTACATACCACATAGTTAATATAAAACGCTAGTTGTACTTAACCAATAGCCAAATTGTTGACTTCATTTACATACCACATAGTTAATATAAAACTATTATTATTTACACATTTACTTTCAAAACTTCTTTTATTTACATACCACATAGTTAATATAAAACTATCCTAAGAATTCTCTCTTAGCATTTGGACATCTTAATTTACATACCACATAGTTAATATAAAACACTCCTGTAGTATTTTCAAAAGTTATTGCGCTAAGCAAATTTACATACCACATAGTTAATATAAAACAAGAACGTGCGCTTATTCTTGGATATCAATATAAAGAATTTACATACCACATAGTTAATATAAAACCCATGTTCATTTCGCCTTTAAATTCAACTTTCTCATAATTTACATACCACATAGTTAATATAAAACAAGAAGGTGAAATAATATTCTATGAAGGGCAATTAAAATTTACATACCACATAGTTAATATAAAACCTTGATGTTTAGCTTTTTGAAATAATTCAAGTTTTAAATTTACATACCACATAGTTAATATAAAACTTTTAAATAACCCCCCTCCCCTTCTGATTTTTTCGTGATTTACATACCACATAGTTAATATAAAACCGCCCTTTTCGCTATTATTTTTTTTATAACCCTTCAATTTACATACCACATAGTTAATATAAAACTGAAAAATTAAAAGAATTAATAGATAAGCAATTAATAATTTACATACCACATAGTTAATATAAAACCTTCTCTGAAAATCGTATATTCTTTTTTAAAAGAGTTATTTACATACCACATAGTTAATATAAAACGAACTAACCTCGTTTCCTGTGTTAATAAACTATGATATTTACATACCACATAGTTAATATAAAACCAGGACAAAATAGATTATTTGACTGGTTAAGAAATAAATTTACATACCACATAGTTAATATAAAACAGTTTATTTGGGGATTAGATAAAAATAAGGTAGCATCATTTACATACCACATAGTTAATATAAAACAATCTGTTTTTCTTCTTCTTCTGCATTATCTACAAGATTTACATACCACATAGTTAATATAAAAC

>CP026615|8|6|2347809-2348957|PILER-CR
ATTTACATACCACATAGTTAATATAAAAC	ATTCGCAAGTTCTTAATCAAAAACCCAATTTTCTTT
ATTTACATACCACATAGTTAATATAAAAC	GCTAGTTGTACTTAACCAATAGCCAAATTGTTGACTTC
ATTTACATACCACATAGTTAATATAAAAC	TATTATTATTTACACATTTACTTTCAAAACTTCTTTT
ATTTACATACCACATAGTTAATATAAAAC	TATCCTAAGAATTCTCTCTTAGCATTTGGACATCTTA
ATTTACATACCACATAGTTAATATAAAAC	ACTCCTGTAGTATTTTCAAAAGTTATTGCGCTAAGCAA
ATTTACATACCACATAGTTAATATAAAAC	AAGAACGTGCGCTTATTCTTGGATATCAATATAAAGA
ATTTACATACCACATAGTTAATATAAAAC	CCATGTTCATTTCGCCTTTAAATTCAACTTTCTCATA
ATTTACATACCACATAGTTAATATAAAAC	AAGAAGGTGAAATAATATTCTATGAAGGGCAATTAAA
ATTTACATACCACATAGTTAATATAAAAC	CTTGATGTTTAGCTTTTTGAAATAATTCAAGTTTTAA
ATTTACATACCACATAGTTAATATAAAAC	TTTTAAATAACCCCCCTCCCCTTCTGATTTTTTCGTG
ATTTACATACCACATAGTTAATATAAAAC	CGCCCTTTTCGCTATTATTTTTTTTATAACCCTTCA
ATTTACATACCACATAGTTAATATAAAAC	TGAAAAATTAAAAGAATTAATAGATAAGCAATTAATA
ATTTACATACCACATAGTTAATATAAAAC	CTTCTCTGAAAATCGTATATTCTTTTTTAAAAGAGTT
ATTTACATACCACATAGTTAATATAAAAC	GAACTAACCTCGTTTCCTGTGTTAATAAACTATGAT
ATTTACATACCACATAGTTAATATAAAAC	CAGGACAAAATAGATTATTTGACTGGTTAAGAAATAA
ATTTACATACCACATAGTTAATATAAAAC	AGTTTATTTGGGGATTAGATAAAAATAAGGTAGCATC
ATTTACATACCACATAGTTAATATAAAAC	AATCTGTTTTTCTTCTTCTTCTGCATTATCTACAAG
ATTTACATACCACATAGTTAATATAAAAC

>CP026615|8|8|2347809-2348957|CRISPRCasFinder
ATTTACATACCACATAGTTAATATAAAAC	ATTCGCAAGTTCTTAATCAAAAACCCAATTTTCTTT
ATTTACATACCACATAGTTAATATAAAAC	GCTAGTTGTACTTAACCAATAGCCAAATTGTTGACTTC
ATTTACATACCACATAGTTAATATAAAAC	TATTATTATTTACACATTTACTTTCAAAACTTCTTTT
ATTTACATACCACATAGTTAATATAAAAC	TATCCTAAGAATTCTCTCTTAGCATTTGGACATCTTA
ATTTACATACCACATAGTTAATATAAAAC	ACTCCTGTAGTATTTTCAAAAGTTATTGCGCTAAGCAA
ATTTACATACCACATAGTTAATATAAAAC	AAGAACGTGCGCTTATTCTTGGATATCAATATAAAGA
ATTTACATACCACATAGTTAATATAAAAC	CCATGTTCATTTCGCCTTTAAATTCAACTTTCTCATA
ATTTACATACCACATAGTTAATATAAAAC	AAGAAGGTGAAATAATATTCTATGAAGGGCAATTAAA
ATTTACATACCACATAGTTAATATAAAAC	CTTGATGTTTAGCTTTTTGAAATAATTCAAGTTTTAA
ATTTACATACCACATAGTTAATATAAAAC	TTTTAAATAACCCCCCTCCCCTTCTGATTTTTTCGTG
ATTTACATACCACATAGTTAATATAAAAC	CGCCCTTTTCGCTATTATTTTTTTTATAACCCTTCA
ATTTACATACCACATAGTTAATATAAAAC	TGAAAAATTAAAAGAATTAATAGATAAGCAATTAATA
ATTTACATACCACATAGTTAATATAAAAC	CTTCTCTGAAAATCGTATATTCTTTTTTAAAAGAGTT
ATTTACATACCACATAGTTAATATAAAAC	GAACTAACCTCGTTTCCTGTGTTAATAAACTATGAT
ATTTACATACCACATAGTTAATATAAAAC	CAGGACAAAATAGATTATTTGACTGGTTAAGAAATAA
ATTTACATACCACATAGTTAATATAAAAC	AGTTTATTTGGGGATTAGATAAAAATAAGGTAGCATC
ATTTACATACCACATAGTTAATATAAAAC	AATCTGTTTTTCTTCTTCTTCTGCATTATCTACAAG
ATTTACATACCACATAGTTAATATAAAAC

>CP026615|8|5|2347809-2348957|CRT
ATTTACATACCACATAGTTAATATAAAAC	ATTCGCAAGTTCTTAATCAAAAACCCAATTTTCTTT
ATTTACATACCACATAGTTAATATAAAAC	GCTAGTTGTACTTAACCAATAGCCAAATTGTTGACTTC
ATTTACATACCACATAGTTAATATAAAAC	TATTATTATTTACACATTTACTTTCAAAACTTCTTTT
ATTTACATACCACATAGTTAATATAAAAC	TATCCTAAGAATTCTCTCTTAGCATTTGGACATCTTA
ATTTACATACCACATAGTTAATATAAAAC	ACTCCTGTAGTATTTTCAAAAGTTATTGCGCTAAGCAA
ATTTACATACCACATAGTTAATATAAAAC	AAGAACGTGCGCTTATTCTTGGATATCAATATAAAGA
ATTTACATACCACATAGTTAATATAAAAC	CCATGTTCATTTCGCCTTTAAATTCAACTTTCTCATA
ATTTACATACCACATAGTTAATATAAAAC	AAGAAGGTGAAATAATATTCTATGAAGGGCAATTAAA
ATTTACATACCACATAGTTAATATAAAAC	CTTGATGTTTAGCTTTTTGAAATAATTCAAGTTTTAA
ATTTACATACCACATAGTTAATATAAAAC	TTTTAAATAACCCCCCTCCCCTTCTGATTTTTTCGTG
ATTTACATACCACATAGTTAATATAAAAC	CGCCCTTTTCGCTATTATTTTTTTTATAACCCTTCA
ATTTACATACCACATAGTTAATATAAAAC	TGAAAAATTAAAAGAATTAATAGATAAGCAATTAATA
ATTTACATACCACATAGTTAATATAAAAC	CTTCTCTGAAAATCGTATATTCTTTTTTAAAAGAGTT
ATTTACATACCACATAGTTAATATAAAAC	GAACTAACCTCGTTTCCTGTGTTAATAAACTATGAT
ATTTACATACCACATAGTTAATATAAAAC	CAGGACAAAATAGATTATTTGACTGGTTAAGAAATAA
ATTTACATACCACATAGTTAATATAAAAC	AGTTTATTTGGGGATTAGATAAAAATAAGGTAGCATC
ATTTACATACCACATAGTTAATATAAAAC	AATCTGTTTTTCTTCTTCTTCTGCATTATCTACAAG
ATTTACATACCACATAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP026615.2\|AVD35181.1\|2356558_2358016_-\|glycine-dehydrogenase-subunit-2	unknown	unknown	gnl\|CDD\|235292
CP026615.2\|AVD35184.1\|2363986_2364973_+\|lipoate--protein-ligase	unknown	unknown	gnl\|CDD\|161920
CP026615.2\|AVD35185.1\|2365282_2366080_+\|lipoprotein	unknown	unknown	gnl\|CDD\|224381
CP026615.2\|AVD35183.1\|2361772_2363503_-\|Na+/H+-antiporter-NhaC-family-protein	unknown	unknown	gnl\|CDD\|224671
CP026615.2\|AVD35179.1\|2353381_2353699_+\|pyrimidine/purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|377724
CP026615.2\|AVD35178.1\|2351160_2352279_+\|transposase	cas14j	-	gnl\|CDD\|223747
CP026615.2\|AVD35176.1\|2346950_2347238_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD35172.1\|2341255_2341432_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD35180.1\|2353783_2356141_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319795
CP026615.2\|AVD35170.1\|2338284_2339172_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213231
CP026615.2\|AVD35177.1\|2349199_2349355_+\|integrase	unknown	unknown	gnl\|CDD\|271189
CP026615.2\|AVD35182.1\|2358015_2360490_-\|aminomethyl-transferring-glycine-dehydrogenase-subunit-GcvPA	unknown	unknown	gnl\|CDD\|234769
CP026615.2\|AVD35174.1\|2344711_2345674_-\|cysteine-synthase-family-protein	unknown	unknown	gnl\|CDD\|107204
CP026615.2\|AVD35167.1\|2335261_2336665_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP026615.2\|AVD35175.1\|2345864_2346416_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380339
CP026615.2\|AVD35169.1\|2337505_2338279_-\|ABC-transporter-permease	unknown	unknown	unknown
CP026615.2\|AVD35173.1\|2342583_2344431_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176521
CP026615.2\|AVD35186.1\|2366182_2366782_+\|Tellurium-resistance	unknown	unknown	gnl\|CDD\|226595
CP026615.2\|AVD35171.1\|2339184_2340207_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD35168.1\|2336668_2337394_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|223816

Protein	Function_ID	Function_description	E-value
CP026615.2\|AVD35181.1\|2356558_2358016_-\|glycine-dehydrogenase-subunit-2	gnl\|CDD\|235292	PRK04366, PRK04366, aminomethyl-transferring glycine dehydrogenase subunit GcvPB.	0
CP026615.2\|AVD35185.1\|2365282_2366080_+\|lipoprotein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	3.07907e-94
CP026615.2\|AVD35183.1\|2361772_2363503_-\|Na+/H+-antiporter-NhaC-family-protein	gnl\|CDD\|224671	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion].	2.5665e-58
CP026615.2\|AVD35179.1\|2353381_2353699_+\|pyrimidine/purine-nucleoside-phosphorylase	gnl\|CDD\|377724	pfam06865, DUF1255, Protein of unknown function (DUF1255). This family consists of several conserved hypothetical bacterial proteins of around 95 residues in length. The function of this family is unknown.	3.7867e-54
CP026615.2\|AVD35178.1\|2351160_2352279_+\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.00854e-54
CP026615.2\|AVD35184.1\|2363986_2364973_+\|lipoate--protein-ligase	gnl\|CDD\|161920	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase. One member of this group of proteins is bovine lipoyltransferase, which transfers the lipoyl group from lipoyl-AMP to the specific Lys of lipoate-dependent enzymes. However, it does not first activate lipoic acid with ATP to create lipoyl-AMP and pyrophosphate. Another member of this group, lipoate-protein ligase A from E. coli, catalyzes both the activation and the transfer of lipoate. Homology between the two is full-length, except for the bovine mitochondrial targeting signal, but is strongest toward the N-terminus. [Protein fate, Protein modification and repair].	8.21907e-95
CP026615.2\|AVD35175.1\|2345864_2346416_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.67456e-17
CP026615.2\|AVD35180.1\|2353783_2356141_-\|HAD-family-hydrolase	gnl\|CDD\|319795	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7. This subfamily contains P-type ATPase transporters of unknown function, similar to Streptococcus pneumoniae Exp7. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids. They are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle. A general characteristic of P-type ATPases is a bundle of transmembrane helices which make up the transport path, and three domains on the cytoplasmic side of the membrane. Members include pumps that transport various light metal ions, such as H(+), Na(+), K(+), Ca(2+), and Mg(2+), pumps that transport indispensable trace elements, such as Zn(2+) and Cu(2+), pumps that remove toxic heavy metal ions, such as Cd(2+), and pumps such as aminophospholipid translocases which transport phosphatidylserine and phosphatidylethanolamine.	0
CP026615.2\|AVD35170.1\|2338284_2339172_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	6.28598e-107
CP026615.2\|AVD35177.1\|2349199_2349355_+\|integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	0.00025848
CP026615.2\|AVD35182.1\|2358015_2360490_-\|aminomethyl-transferring-glycine-dehydrogenase-subunit-GcvPA	gnl\|CDD\|234769	PRK00451, PRK00451, aminomethyl-transferring glycine dehydrogenase subunit GcvPA.	0
CP026615.2\|AVD35174.1\|2344711_2345674_-\|cysteine-synthase-family-protein	gnl\|CDD\|107204	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.	1.60519e-105
CP026615.2\|AVD35167.1\|2335261_2336665_-\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.30987e-43
CP026615.2\|AVD35168.1\|2336668_2337394_-\|DNA-binding-response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.41058e-80
CP026615.2\|AVD35173.1\|2342583_2344431_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176521	cd08579, GDPD_memb_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.	1.2911e-88
CP026615.2\|AVD35186.1\|2366182_2366782_+\|Tellurium-resistance	gnl\|CDD\|226595	COG4110, COG4110, Uncharacterized protein involved in stress response [General function prediction only].	7.68444e-79

>CP026615.2|AVD35176.1|2346950_2347238_-|hypothetical-protein
MKKFLYALYSFIVIIANFRLKEKNYNFILLAIFFILLLIQNGVLKTGYQNRATFYQDNYFNGEDKNDKIKFMTIKIFIFLSLPLCFNILFDYLTS
>CP026615.2|AVD35175.1|2345864_2346416_+|XRE-family-transcriptional-regulator
MSINTIIAKNLNRLRNERNLSLGQLAELSGVSKVMLSQIEKGDSNPTVNTIWKIASGLNVPYTAILEQPQNETFIVSKTDIDVQVSENKDYRLYCYYPNTPTRNFELFQMELEEGHSYTSVGHSEKSQEYIMIIEGQLKLEVNDSIYQLRENDSICFSAESMHTYHNQGEKTLKAVIINYYPV
>CP026615.2|AVD35174.1|2344711_2345674_-|cysteine-synthase-family-protein
MRVLNNVTEAIGNTHMLHLSKIVDEFGVQGNIYAKMEYLNPGFSKKDRVALQMITEAENAGLLVPGQAVVELTSGNTGTGLAIACACKGYKFIACMSKGNSMERARMMKALGAEVVLVDQMPNSVHGQVSGEDLALVEIEAQRITKERNAFRADQFNLEACNHAHENYTAEEMWEQLDGNIDVFVDFLGSGSTFAGCSKALKGHKSSIKCYVVEPKTAAIYSGKEITDQGHKIQGGGYSMDLPLVDKKLIDGYIQITDEEATDVARKLAKLEGVFAGFSSGANVCAAIKLLKSTERGKNIVLTLNDSGLKYLSTDLYEEL
>CP026615.2|AVD35173.1|2342583_2344431_-|glycerophosphodiester-phosphodiesterase
MTKRVLSNFTLTGKNILSKFIFMIRYNFSTLILFELFYKGLALLLILPSIKYIFDNLLKSLNIFYLNMDNIIKILSNPISIVLIILSVIILAFYAFFEFTSVIICFNRSIKCEKIGLFELIKMSFKKSINLLYPKNILLFIFVLLIIPLVNTVLISGFIGKIQIPDYILDYIKSNNILNIVYMISLFIIYILVIRWIFSVHEITLNTENFKIARKESVNLIKGRIIRTVIYSLILSLVMAIIGYVIYHIGIISIGIWTKYYTNIGSLKELFINRCISFEDYFSLILSIFIFIVDIAFISATYYEYKGVNISRNNIIKEKKSIPKTIFKLSLIILIFCVESNAYSSHVNGLFNTSFSFNTTTIAHRAGAERAPENTLIALKEALNAKADYAEIDVQETKDGELIILHDSNFKRTTRVDKNVWDVNYDEVRTYDAGSFYYDGKGYYDERFVGEKIPTLDEMIKYSKGRIKLLIEIKLTGHEKGDVTKKVVQLIKENNFENQCIIASMDKTVLQKVKKLDKNLMTCYFMAVAYGDFSKLNYIDVYGIESTFVNTTVVEKIHKMNKKIFVWTVNSYSLIEKMLDLNVDSIITDNPYLVDGAIVWKKNGFINKVSDYLFS
>CP026615.2|AVD35172.1|2341255_2341432_+|hypothetical-protein
MFIGEIDKCTHILTAYISSSYDYCNFLDTQLDDFISEYGETVVEICLYQVLLLVSRYN
>CP026615.2|AVD35171.1|2339184_2340207_-|hypothetical-protein
MVNWEIKKLIKSKSMFISLGILILILSINIFVKPVLETENYYIDKERGRIEDTRNSEEIGNYKFQNKINVLKQLSSQKDMDVFSKKIKSISTNKLYNLIINEYKDVSFWKVFNYRATNSLINVGMLIIIVIIISNIYVDELVFSVRDIILSSKEKKKALNSKIVIAFLVPLTIYSVYLIGIFITTCMQQGMPINGDLEAFRIVDNIATLKCNSSIINYVISNIGIEFLMFEGLAMIALLGSFISKSSITSISFFIFTIVITKIISVIHILPKNLLLAISTVNYYDLIFGFNKIIGNYLGEIIIFKIHIDIVNLLIGVLVAIFIGAMSFCFIIIKSDYISK
>CP026615.2|AVD35170.1|2338284_2339172_-|ABC-transporter-ATP-binding-protein
MNKLEIKNLSKIYGKKVANDKITVTLENGVYGLLGPNGAGKSTLMKQITTLIKPDEGQIFYNGEDIFKMDDDYRNILGYLPQEFGVYKNFTAKEFLQYIGALKGLKGKYLSSKIEELLDLVGLYDVRDKSIGKFSGGMKRRVGIAQVLLNDPKIIVLDEPTAGLDPQERARFRNLIAKISRNKIIVLSTHIISDIESVAKETIMIKDGKLLMKGTHKEILSHMENKVYNVQVKNECEVDDIQSKYKVVSIQSDIDSIVLRIVSEDIPIGDNIQPVQAKFEDVYMFYFDLEDAREA
>CP026615.2|AVD35169.1|2337505_2338279_-|ABC-transporter-permease
MMYLVKIEMIKILKSKSVWIIWLFLLFFGFVLIRKFDVLDTYADIFYKIEGSIPLIGLIMFIITSGNYIKEYDSNMTGLINTTKNGKKSVVLSKLVANGLILSIINISFILLVGIRGFSFFDFKNLNEPIHNLWYFGNSSLNLTVIQMYIIVILTTIFASFVFAQIGLTLSSIFKSAVIPFILGGLIMAIPYFSVGFIPDKAIKFMSVTPNWIMMSQQIVRYNVPSILIGFSIVISIILMIVLTKITYKNFTSSKRF
>CP026615.2|AVD35168.1|2336668_2337394_-|DNA-binding-response-regulator
MENRVLIIDDEVEILKLLETVLKKEGLSNIYTAKTRKEGLEVFKNINPDLIILDIMLPDGEGYDICKEIRKTSNSPIIFLSAKTEELDKLLGLAIGGDDYVTKPFSPKEVAFRVKAHLRRLSYFSDSQNENTDSDNNEEKTISFGPYILNESRAELIKDGKSIGLSAKELKILSLFANNQNQIISKEKLWDKVWGEDYVGFDNTIMVHIRKIREKLEDNPSKPEYILTIKGLGYKLSVKED
>CP026615.2|AVD35167.1|2335261_2336665_-|sensor-histidine-kinase
MKWKITRNFIFTIVFVVISVVIINIISILYVISTDNFLKVVDSRNNPEEFARSFEKDLYEKDGELKLSKIGADKLEKSNSWIQVLNDLGEEVFGVNVPKDTPQKYTPFQMVNNYKYIETEYVNFVLEKYLNKKHLNIIVGIPSRDVSRIILTYSQNNTKKTLNKIIIIILVIDGMVALGVGYLFSRKLTKPISSVLWSIETMANGNYSLYLKDRGIYEEVFKNINMLADTLRVNEVERKENEELREEWLANITHDIKTPLASIQGYAEIINDKDYEFSEDEIREYAEIIYNKSKYIKDLVDDLNLSTRLKNNTIVLDKKKVNLVGLVRNIIIDILNDNRYKNRNIEFESNEDLIEVYVDSILFRRAITNLIFNSIVHNSEGTLISVKIVKKDNIEIIIKDSGVGISKNDLKHIFKKYYRGTNTGEMHKGSGLGMAISKEIIEIHKGKIYLNSEIGIGTEIIIEINQN
>CP026615.2|AVD35177.1|2349199_2349355_+|integrase
MLTTLDILISLLLTGFNIKILSKKLGHTDIKITMNRYSHILDNMHKKLLKI
>CP026615.2|AVD35178.1|2351160_2352279_+|transposase
MVVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKNDKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQNALKDLENAYEKFFKEKAGFPKFKSKKTNRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSIKTIGSLNRNKARLKVARLQEHIANQRKDFLQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEYKANWHGRKIVRVGKFFASSQICNKCGYKNEEVKNLNIREWICPSCNETHDRDINASMNILKEGLRLITIQNK
>CP026615.2|AVD35179.1|2353381_2353699_+|pyrimidine/purine-nucleoside-phosphorylase
MNEFKNVTAVKKANVYFDGKVSSRVIILPNGERKTLGLMLPGEYTFSTREEEIMEILAGSMDVKLPGSNEFVTYKEGQKFNVPSDSSFDLKVNEVVDYCCSYIAD
>CP026615.2|AVD35180.1|2353783_2356141_-|HAD-family-hydrolase
MGNLNLKRYNCDIKMGLSSEQIQSRIDNNLVNVFDNGKTKTYKQIFKDNVFTLFNLINIILVCLLVSVGSFKNTLFIFIAVINTIIGVIQEIRAKRLLDNLSVIVSNKVSVIRDKEKKEIDVQELVLDDIMILKTGNQICADSKVLDGRLEVNESLITGESDIVIKNKGDFLYSGSFVVSGEAFVRVENIGKDNYANKIANDAKISKKHNSQLRNSLNAILKVVGIIIIPLGLILFAKQHFGNGDSIVTSIVGTVAAVNGMIPEGLTLLTSIALALGTIKLASHKTLVQELYCVETLARVDTLCLDKTGTITEGKMQVDDVVMLEELDIDDIMGNICNALKDDNATLNAIRDKYSILDTHKVKNLIPFSSERKYSGVIFEGEGTYLLGAFEFIFKDKYKELKTEVEKYSKKGNRVIVLAHSNSYMEDNNIPEDIKPLAFILILDKIRDEAKETLEFFYNEGVDIKIISGDNPMTVSEVARKAGLKTAGNFIDATTLKNDEDIYEAVDKYNVFGRVSPQQKKQMILALKKQNHTVAMTGDGVNDVLALKEADCSIAMASGSDVTKNVSNLVLLDSNFASMPKVVMEGRKVINNIQRTASLFLVKTIFSFFLSILTLFFFSRQYPFVPIQLALIGAVTVGIPSFFLALEANRGRISGNFLLNILKNALPGALCVTINVIIVYNIVEYLGYNSSVFSTMCAILTGVCGLLILRQQCLPFNKERIFLIVSMTIAFIVGILFLGGLFSFVALSKQLILITVVLAVLMPIMIKVMRFVLDEILGAIVPNLN
>CP026615.2|AVD35181.1|2356558_2358016_-|glycine-dehydrogenase-subunit-2
MKEYNSLLIDISKKGRKAYSLPKLDIDDIKIEDMIDQNMIRKSELNLPEVGELELVRHYTLLSNKNFGVDTGFYPLGSCTMKYNPKINEDMAALPNFTGMHPYQSSDTAQGSLSLMYDLSRRLSEITGMDEVTLQPSAGSHGEFTGLMIIKAYHENRGDHKRTKVIIPDSAHGTNPASAAMANFDVIQIASDKNGAVDINALKEVLNDEVAALMLTNPSTLGLFEKNIKEIATLVHEAGGLLYYDGANMNAIMGITRPGNMGFDVVHLNLHKTFSTPHGGGGPGAGPVGVKKELVSFLPIPVIEKREDKYILNYDREKSIGKIKNFYGNFGVLVRAYTYILTMGRDGLKEASEMAVLNANYIKESIKDDYILPIDTLCKHEFVLGGLPRGEANIKTIDIAKRLLDYGYHPPTMYFPLIINEALMIEPTESESIETLDSFIDAMKSVAKEAKEEPELLKTAPHNTLVKRVDDARAVKKPILTWSQR
>CP026615.2|AVD35182.1|2358015_2360490_-|aminomethyl-transferring-glycine-dehydrogenase-subunit-GcvPA
MNELKRVSLYNIHKELGAKLVEFAGWEMPLEYEGINKEHDMVRKSAGIFDVSHMGEVQIKGVESEKFIQNLVTNDISTLNINDIIYTPMCYENGGVVDDLLIYKFGEEDYLLVINAGNIDKDVAWIIKQSERYNVDIKNISSEVSQLAIQGPKAEEILQKITDIDLNSIKFYKSIPSVKVCGCPCLVSRTGYTGEDGFEIYCENKYAEIIWNEVLKVGGEDICPAGLGCRDTLRFEAALPLYGHEINEHISPVEGGLSIFVKTNKESFIGKSILSKEKENGAKRKLVGFEMQGKGMPRNGYDIRIGDKIVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIRKKVVPAVIAKKPFYKKQYKKDNIILNKENKFSYIPATSEDKSKMLKVVGLNSVDELFSDIPEEVKLKRDLNLEIGKSELEVSKIVKRLSEENLSLEDLTCFLGAGAYDHYIPSIIKHITSRSEFYTAYTPYQAEISQGTLQVVFEFQSMIAEITGMEIANASMYDGATSAIEACIMAMNQTRKNKIVVSKTTHPETLSVLRTYLQYKDCEIVEIDFCNEYGTTDIEKLKASVDKDTACVLIQTPNFFGIIEEMEEIEKITHENKAMLIMSVDPISLGVLKTPGEIGADIVVGEAQSLGNPLNFGGPYVGFLASKSKYTRKMPGRIVGQSLDTEGKIAYVLTLQTREQHVRREKATSNICSNQALNALVASIYMATMGKEGFKEVGMQSMKKAHYTYNKLVQTGKYKPIFKGKFFKEFAIQGNLNIETINDKLLEENILGGYNLEYNYPELKNSTLLCVTEKRSKEEIDKLVGIMEGL
>CP026615.2|AVD35183.1|2361772_2363503_-|Na+/H+-antiporter-NhaC-family-protein
MRNKKINIIFLTTIMFIMSTVMVFAEEDIDTIALANAEKFGILTLIPPLVAIILAFITKNVIISLLIGILSGSFIIKASGINVFATFIQAFLDLVDRALVSLADPWNAGIILQVLAIGGVINLVAKMGGAKAIAEALAKRAKSAKGTQLITWFLGLLVFFDDYANSLIVGPMMRPVADKMKISREKLAFIIDATAAPVAGLAIISTWIGLEVGLIHDAFESISIDVDAFGIFLNTIPFRFYNILILAFIIISALLLKEFGPMRKAEIKSRSRKIDIDLDEGVEELDDLAPKNGVKLSVWNAIIPIGTLIIVALASFYYSGYTSIMGGEDKALIQLFTNSPYSFEAIKEAFSASDASRALFQSALVASLVAIIMAVIKKIFTISEAIDVWIDGMKSLVITGVILILAWSLSSVIKELGTAKFLIHLLSGSLPPFLLPSLIFGLGAIISFATGTAYGTMGILMPLAIPLAYSLNPDMSYVIVSTSAVLTGAIFGDHCSPISDTTILSSMGAGCNHIDHVNTQMPYAIFTAVITIVFGYIPAGLGLPIYIVLPVAIAAIFVGIQIIGKRVDEAEIELVE
>CP026615.2|AVD35184.1|2363986_2364973_+|lipoate--protein-ligase
MLLIYNEKTNPYFNLAMEEYLLKNFDEDLFILWRNEPSIIVGKNQNTLSEINLEYIKEYSIPVVRRQSGGGAVFHDLGNINFTFIACNNNNFSDFRRFTQPIIDLLKTLDVNAEFSGRNDLLIDGKKFSGNAQYNYKNKVMHHGTLLFSSEINDLSKALKVKPIKFEGKGIKSVKSRVTNISEHLHSKMDILEFKDAIMNYLSKTNTDNTNYCLSELDIEQIEKLTKSKYETWDWNFGNSPKYTLSNELKYSGGNVEFNLNVDKGIITSIKFFGDFFGKCDVSFVENKLIGIRHEENALRNTLNSIEINDYFLGADTDILVSGILGVK
>CP026615.2|AVD35185.1|2365282_2366080_+|lipoprotein
MKFKKLLCLLLCLVLTLAVVGCSKAKDDKKIVVGATLVPGGELLEELKPLIKEKGYTLEVKNFDDYILPNEALNNGEIDANLFQHEPYLKEAVKAKGYKIMAGKKLYVCPAILYSYKIKSVDEFKKGDTIAISNNPSSCSKNLRYLESIGLLTLPKGDGLVSPKDIIENPKGIQFKELDIAQIPSSLPDVTAAFIDTTYAVPAGLDAKKNGIYTAPINDEYANLLAFRTEDKDSEKIKVLQDVLTSDKARSLIEEKYKGIVIPTF
>CP026615.2|AVD35186.1|2366182_2366782_+|Tellurium-resistance
MAIELKKGQKINLTKKENSDLGEILVNLNWNQKVQKKGFFGSLRSSNIDLDLGCLFEMKNGVKGAVQALGNAFGSLDNPPFAQLDGDDRTGSNAQGENLRINGNKIKEIKRILIYAFIYEGVANWSEADGIVTIKQKQDSDLVVKLDEHKNGYNMCSIALIENVNDETFSVEKVVKYFKGHREMDTEFHWGLKWVAGRK

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Crispr_ID: CP026615_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026615_9

2513657-2513754

Orphan

Consensus_repeat	Method
TTTATCAAGTAAAATATAGTTATATTAATATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026615_9

>merge|CP026615|9|2513657-2513754|CRISPRCasFinder
TTTATCAAGTAAAATATAGTTATATTAATATAATTATTTTAGATAATAAGGTAGAAATATTTTAGTTTATCAAGTAAAATATAGTTATGTTAATATAA

>CP026615|9|9|2513657-2513754|CRISPRCasFinder
TTTATCAAGTAAAATATAGTTATATTAATATAA	TTATTTTAGATAATAAGGTAGAAATATTTTAG
TTTATCAAGTAAAATATAGTTATGTTAATATAA

Protein	Signature genes	Signature genes Name	Protein_function
CP026615.2\|AVD35319.1\|2519024_2520290_-\|dihydroorotase	unknown	unknown	gnl\|CDD\|236479
CP026615.2\|AVD35321.1\|2521581_2522127_-\|NADH-peroxidase	unknown	unknown	gnl\|CDD\|153105
CP026615.2\|AVD35307.1\|2508155_2508308_-\|conjugal-transfer-protein	unknown	unknown	unknown
CP026615.2\|AVD35309.1\|2509724_2510111_-\|DUF961-domain-containing-protein	unknown	unknown	gnl\|CDD\|368761
CP026615.2\|AVD35312.1\|2510798_2512736_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376899
CP026615.2\|AVD37762.1\|2522349_2523264_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
CP026615.2\|AVD35310.1\|2510126_2510441_-\|DUF961-domain-containing-protein	unknown	unknown	gnl\|CDD\|368761
CP026615.2\|AVD35305.1\|2506663_2506885_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD35320.1\|2520342_2521491_-\|DUF362-domain-containing-protein	unknown	unknown	gnl\|CDD\|224917
CP026615.2\|AVD35311.1\|2510463_2510583_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD35308.1\|2508310_2509696_-\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|224588
CP026615.2\|AVD35322.1\|2523679_2524561_+\|polysaccharide-deacetylase	unknown	unknown	gnl\|CDD\|200569
CP026615.2\|AVD35317.1\|2516830_2517505_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
CP026615.2\|AVD35316.1\|2515590_2516823_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|223914
CP026615.2\|AVD35315.1\|2514475_2515480_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340424
CP026615.2\|AVD35304.1\|2506049_2506547_-\|antirestriction-protein-ArdA	unknown	unknown	gnl\|CDD\|377800
CP026615.2\|AVD35318.1\|2517507_2518740_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
CP026615.2\|AVD35314.1\|2513777_2514452_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|223816
CP026615.2\|AVD35306.1\|2506927_2508133_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367101
CP026615.2\|AVD35313.1\|2512722_2513490_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059

Protein	Function_ID	Function_description	E-value
CP026615.2\|AVD35319.1\|2519024_2520290_-\|dihydroorotase	gnl\|CDD\|236479	PRK09357, pyrC, dihydroorotase; Validated.	0
CP026615.2\|AVD35321.1\|2521581_2522127_-\|NADH-peroxidase	gnl\|CDD\|153105	cd01046, Rubrerythrin_like, rubrerythrin-like, diiron-binding domain. Rubrerythrin-like domain, similar to rubrerythrin, a nonheme iron binding domain found in many air-sensitive bacteria and archaea, and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system. The rubrerythrin protein has two domains, a binuclear metal center located within a four-helix bundle of the rubrerythrin domain, and a rubredoxin domain. The Rubrerythrin-like domains in this CD are singular domains (no C-terminus rubredoxin domain) and are phylogenetically distinct from rubrerythrin domains of rubrerythrin-rubredoxin proteins.	9.79702e-55
CP026615.2\|AVD35317.1\|2516830_2517505_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	1.19086e-109
CP026615.2\|AVD35309.1\|2509724_2510111_-\|DUF961-domain-containing-protein	gnl\|CDD\|368761	pfam06125, DUF961, Bacterial protein of unknown function (DUF961). This family consists of several hypothetical bacterial proteins of unknown function.	9.54557e-44
CP026615.2\|AVD35312.1\|2510798_2512736_-\|ABC-transporter-permease	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	1.73546e-05
CP026615.2\|AVD37762.1\|2522349_2523264_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	9.64018e-11
CP026615.2\|AVD35310.1\|2510126_2510441_-\|DUF961-domain-containing-protein	gnl\|CDD\|368761	pfam06125, DUF961, Bacterial protein of unknown function (DUF961). This family consists of several hypothetical bacterial proteins of unknown function.	7.00664e-46
CP026615.2\|AVD35320.1\|2520342_2521491_-\|DUF362-domain-containing-protein	gnl\|CDD\|224917	COG2006, COG2006, Uncharacterized conserved protein [Function unknown].	3.03391e-76
CP026615.2\|AVD35308.1\|2508310_2509696_-\|DNA-translocase-FtsK	gnl\|CDD\|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	4.90599e-31
CP026615.2\|AVD35322.1\|2523679_2524561_+\|polysaccharide-deacetylase	gnl\|CDD\|200569	cd10944, CE4_SmPgdA_like, Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins. This family is represented by a putative polysaccharide deacetylase PgdA from the oral pathogen Streptococcus mutans (SmPgdA) and Bacillus subtilis YheN (BsYheN), which are members of the carbohydrate esterase 4 (CE4) superfamily. SmPgdA is an extracellular metal-dependent polysaccharide deacetylase with a typical CE4 fold, with metal bound to a His-His-Asp triad. It possesses de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. SmPgdA plays a role in tuning cell surface properties and in interactions with (salivary) agglutinin, an essential component of the innate immune system, most likely through deacetylation of an as-yet-unidentified polysaccharide. SmPgdA shows significant homology to the catalytic domains of peptidoglycan deacetylases from Streptococcus pneumoniae (SpPgdA) and Listeria monocytogenes (LmPgdA), both of which are involved in the bacterial defense mechanism against human mucosal lysozyme. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. The biological function of BsYheN is still unknown. This family also includes many uncharacterized polysaccharide deacetylases mainly found in bacteria.	2.82771e-75
CP026615.2\|AVD35316.1\|2515590_2516823_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|223914	COG0845, AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane].	7.07051e-21
CP026615.2\|AVD35315.1\|2514475_2515480_+\|sensor-histidine-kinase	gnl\|CDD\|340424	cd16948, HATPase_BceS-YxdK-YvcQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ. This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis BceS and Bacillus thuringiensis YvcQ, the HKs of the two-component regulatory system (TCSs) BceS-BceR and YvcQ-YvcP, repsectively, which are both involved in regulating bacitracin resistance. It also includes the HATPase domain of YxdK, the HK of YxdK-YxdJ TCS involved in sensing antimicrobial compounds.	3.55793e-54
CP026615.2\|AVD35304.1\|2506049_2506547_-\|antirestriction-protein-ArdA	gnl\|CDD\|377800	pfam07275, ArdA, Antirestriction protein (ArdA). This family consists of several bacterial antirestriction (ArdA) proteins. ArdA functions in bacterial conjugation to allow an unmodified plasmid to evade restriction in the recipient bacterium and yet acquire cognate modification.	2.59639e-45
CP026615.2\|AVD35318.1\|2517507_2518740_+\|ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	6.78715e-36
CP026615.2\|AVD35314.1\|2513777_2514452_+\|DNA-binding-response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	6.598e-73
CP026615.2\|AVD35306.1\|2506927_2508133_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|367101	pfam02486, Rep_trans, Replication initiation factor. Plasmid replication is initiated by the replication initiation factor (REP). This family represents a probable topoisomerase that makes a sequence-specific single-stranded nick in the plasmid DNA at the origin of replication. Human proteins also belong to this family, including myelin transcription factor 2 and cerebrin-50.	3.89405e-86
CP026615.2\|AVD35313.1\|2512722_2513490_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	3.19794e-102

>CP026615.2|AVD35313.1|2512722_2513490_-|ABC-transporter-ATP-binding-protein
MEEILSVENIKKEYGRKGSKHEALRGITFKVYKGEFVGIMGSSGAGKSTLLNIISTIDLPSSGDIYINGKNTIKMKQNELADFRRDNLGFVFQDSNLLDTLTIKENIMLPLSLKNERVSVIENRINEISRELNIESILDKYPSEVSGGQKQRGAVCRAIATKPSLVLADEPTGALDSKSARDLLNCLLKLNKDSNKTILMVTHDAISASFCNRILFIKDGIIFTEIVKGESNREFYNKIVNTVSLIGGVNKNDFI
>CP026615.2|AVD35312.1|2510798_2512736_-|ABC-transporter-permease
MTLFRIAMKNVKNSFFNYLMYFISIVFSVFIFFSFKSIEYNKALSSLGEKTRMSINTSSILIVAFVFLFIYYSNSFFFNRRSREVGTYSLLGMRKNQIGKIFLYETFLMGIVAILIGIFLGLLFSKLMTMMLVKLMNEMIVVNMNLSIKALVQTLAVFLTIFIVIGIRNTIVIRNKRIIELFNKPPEKCRFKKFIKLKGALGVLLITISYLMSISYFIAENIMFSVFILVTIIPGTFLFFSSVMYMIIDAVKKRKGFYYKGQNLIAFSELGFKLKSNSSVLAIIAILIATSVTILGFTISLYYDIDRNISENYKYSYTINLGNSHVNNKIDKLLDKYKKDNKIIFDKTIELIDKDINLEMYYKNGNSYIEDRTSVDIIRESDFKKLRQYQNNNYEELISKESVYYVSDSYKKILFKDFEIEKINLHFKDTSECDINLFTVQKTILEPEINSQATFDLIVVKDKVFNQLKLHGDSRLIRLIDIKNEKKELNLTLKLKNIVSENMEFTYPFNFTSSIESYDNLIKLSGLMLFIGIFLSVVFLLCTGSIILFKQLSNIYDDRERYIMLTKLGANNKDIEKIISKQLKVIFLMPLVVGTVHNLFAMSIVQKFIPRSLLVPIIITLVIYFIGYFIYYFLTLKYALNMITE
>CP026615.2|AVD35311.1|2510463_2510583_-|hypothetical-protein
MRCLFFYPILKGSELMKTKNQESKGRSPLFKTIKHSFSQ
>CP026615.2|AVD35310.1|2510126_2510441_-|DUF961-domain-containing-protein
MELKFVIPNMEKTFGNLEFAGEDKVVQRRINGRLTVLSRSYNLYSDVQRADDIVVVLPAEAGEKHFGFEERVKLVNPRITAEGYKIGTRGFTNYLLHADDMIKE
>CP026615.2|AVD35309.1|2509724_2510111_-|DUF961-domain-containing-protein
MMRLANGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDSSSFKAQPQAKKEPTQDK
>CP026615.2|AVD35308.1|2508310_2509696_-|DNA-translocase-FtsK
MKQRGKRIRPSGKDLVFHFTIASLLPVFLLVVGLFHVKTIQQINWQDFNLSQADKIDIPYLIISFSVAILICLLVAFVFKRVRYDTVKQLYHRQKLAKMILENKWYESEQVKTEGFFKDSAGRTKEKITYFPKMYYRLKNGLIQIRVEITLGKYQDQLLHLEKKLESGLYCELTDKELKDSYVEYTLLYDTIASRISIDEVEAKDGKLRLMKNVWWEYDKLPHMLIAGGTGGGKTYFILTLIEALLHTDSKLYILDPKNADLADLGSVMANVYYRKEDLLSCIETFYEEMMKRSEEMKQMKNYKTGKNYAYLGLPAHFLIFDEYVAFMEMLGTKENTAVMNKLKQIVMLGRQAGFFLILACQRPDAKYLGDGIRDQFNFRVALGRMSEMGYGMMFGSDVQKDFFLKRIKGRGYVDVGTSVISEFYTPLVPKGYDFLEEIKKLSNSRQSTQATCEAEVAGVD
>CP026615.2|AVD35307.1|2508155_2508308_-|conjugal-transfer-protein
MLAGVAIATPALNPPYLTGGYKSTGNSQKNIRKSFGYKGFTKFQRMSNGL
>CP026615.2|AVD35306.1|2506927_2508133_-|XRE-family-transcriptional-regulator
MEGFLLNEQTWLQHLKEKRLAYGLSQNRLAVATGITRQYLSDIETGKVKPSEDLQQSLWEALERFNPDAPLEMLFDYVRIRFPTTDVQQVVENILQLKLSYFLHEDYGFYSYSEHYALGDIFVLCSHELDKGVLVELKGRGCRQFESYLLAQQRSWYEFFMDVLVAGGVMKRLDLAINDKTGILNIPVLTEKCQQEECISVFRSFKSYRSGELVRKEEKECMGNTLYIGSLQSEVYFCIYEKDYEQYKKNDIPIEDAEVKNRFEIRLKNERAYYAVRDLLVYDNPEHTAFKIINRYIRFVDKDDSKPRSDWKLNEEWAWFIGNNRERLKLTTKPEPYSFQRTLNWLSHQVAPTLKVAIKLDEINQTQVVKDILDHAKLTDRHKQILKQQSVKEQDVITTKK
>CP026615.2|AVD35305.1|2506663_2506885_-|hypothetical-protein
MNFGQNLYNWFLSNAQSLVLLAIVVIGLYLGFKREFSKLIGFLIIAIIAVGLVFNAAGVKDILLELFNRIIGA
>CP026615.2|AVD35304.1|2506049_2506547_-|antirestriction-protein-ArdA
MDDMQVYIANLGKYNEGELVGAWFTFPIDFEEVKEKIGLNDEYEEYAIHDYELPFTVDEYTSIGELNRLWEMVSELPEELQSELSALLTHFSSIEELSEHQEDIIIHSDCDDMYDVARYYIEETGALGEVPASLQNYIDYQAYGRDLDLSGTFISTNHGIFEIVY
>CP026615.2|AVD35314.1|2513777_2514452_+|DNA-binding-response-regulator
MFKIMVVEDDVSLKNIIAECLTKWGHNVHQIENLENIIEEFKNYKPQLVLLDINLPFYDGFYWCNEIRKISKVPIIFISSRNSNMDVIMGVNLGADDYIQKPFSIDVLVAKVNALLRRTYNFVDNNSNQIIHNGVTLDLSTATINYEDNTIELTKNEIKILHELMKYKGQIVSRNKLMKKLWDNDWFVDDNTLTVNVNRIRSKLNEIGLEDFIETKRGLGYIIN
>CP026615.2|AVD35315.1|2514475_2515480_+|sensor-histidine-kinase
MSFKDFLKDKLGFLVYNFTFLIFTIAVIIFSPVDVFLIDTILYILVINVVFLFLYLFISYIKKNKFLDKIKNDTFKININTTELAKCKNEEKIYLNIIKNHQYQCNNIINKNIKKFEENKEILNMWVHDVKIPIAIIKLTLEQNENLIDEKISDDIDSEIFRIENSVEKILYLSRLEDFHKDFLIQEVNIEKIIRNIIKKYSKYFISKKIILNLNNLNFKVLSDEKWLYFIFEQLLSNSLKYSSLGDNISIYCKRSKNYLQLRVEDTGCGIKKEDLNRIFNKGFTGNNGRNNSKSTGLGLYLVKELCDKLGHKIAVDSEYNQYTKFTITFKCDL
>CP026615.2|AVD35316.1|2515590_2516823_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MSFLKKFKNKRFRNNSFKSNNFRSSSFGSSGFNSKNKGFKNNPFKNKRFKIYAGIAVIILLILGVLAYVDSKNTKLQANENFIETYTIPENEKIFINGMVVPKQTKDFNISGDYELSDVNVTNGQKVNQGDLLFTAKNPTIIAEIDSLKSQLSQYKKQKISLSDIAENRDAIASINAQITTLNSQIASLDKKAYDRVTAPFDGTVYLNDQTGNPDQPVSFMTIQGLEFYMKGQASEQDLPKMKIDQMVNILVFSTDQKLTGRISFISDKPSTPNTEMGAQQNTLSYYDINIAFDNQEGLVNGFHLQASLEVSNSSFKIPASCVLKDKKHSYVFKDLDGILKKQIVDVASQNDDFAVVRGGLEQGDIIIKHPTKEMKEGDPVQGDGVTAGSNNNGDTTPNKKVEEVNMDVN
>CP026615.2|AVD35317.1|2516830_2517505_+|ABC-transporter-ATP-binding-protein
MLIKLENIQKYYKVGKDELHVLKSLNLEIESGEFVMIMGKSGSGKTTLLNILGFLDVFDEGRYIFDGTDVTNLSENERSVFRNINIGFVFQQFNLIETLNVYQNVELPLIYNKSLKKSNREEIVKDKLSSVGLLDKLKQKPLQLSGGQQQRVAIARCLANDPQIIFADEPTGALDSETSREIMELLTRLNKQGKTIIMVTHDQDLTKYATKVIRLKDGVFTSEV
>CP026615.2|AVD35318.1|2517507_2518740_+|ABC-transporter-permease
MSLLKNSLANLKGHKLRVFVALLWIIIGITSVILVSSIGNGFQKEIKKSVNNVNPNKTTISFESADNTGLTDDMSIFLKPFNAKDLEELSFVEGVERIAPSRDGFNLDSVYSSQASFDKKTTYVDVGPVKKDSKINLICGRDFSLDDEKRKVILLTLQSTSEIFENPEDALGHGININGTIFEIIGVLDDSQQNQAGGFFGGYQDMQFTTSLIPKKAFDTLMSQNSYSNEIYQLDLVSSKGYNVNEVANNVISKLYEMHPGINGSYTTPDPTEQTAYLESINSNVNKYVSIITVVAMFVGGIGVMNIMYVSVMERQREIGIRRAIGAKPRSILFQFLVEAVFITVCGGILGTIVGFAATNYVSKYIGFEAIPSLNSLFYAIIATILTGVVFGLIPAFKASKLDPIKAIYK
>CP026615.2|AVD35319.1|2519024_2520290_-|dihydroorotase
MILIKNGRVIDPKSQRDENIDLIIKENKIYKIGKFDESDEYEKIIDASGNVVAPGLVDVHVHFRDPGFTYKEDIESGAKSAARGGFTTVICMANTNPIVDNEDTFNYVKEKSKNACINVLQAAAITKGFEGKELVDMEALKKAGVPGFTDDGLPLMDSNLIMEAMVKAKELDVPLSFHEEDPSLVGNPGVNAGKIASELGLKGASSVAEDVMVARDCMLALKTGAKVDIQHISSGVSVDMVRFAKYLGANVVAEASPHHFTLTEEDVLEFGTNAKMNPPLRSKWDRDKIIEGLNDGTIEIIATDHAPHSREEKDREFIKAPSGIIGLETSLALGITNLVHKNHLSMMQLIEKMSTNPAKLYNLNTGFIEEGAVADIVIFNPEEEWTVESFVSKADNSPFKGKSLYGKINYTICNGKIVYNA
>CP026615.2|AVD35320.1|2520342_2521491_-|DUF362-domain-containing-protein
MKSVSVRSCKTYNYEEVRLSIEKNLEDIGGIDKFVKKGSKVLIKPNLLMKKKPEEATTTHPMVVKVVCEKLLELNCDITIADSPGGPYNQSSLKSIYKASGIEEVANELGIKLNYDVSDVKVHSEKAHVLKYMDIIKPVVDSDYIINLCKLKTHIMATFTGGTKNLYGCIAGLKKAEIHYRFPTEELFCENVLLDICDYIKPTLTIMDGIVGMEGDGPSAGTTREIGVLLASQNPYAIDVVACKIISLIPNRVATIRGAIKRGYIREDFSDIEILGEDINDLIIKNYKVPNVSKDLRLFSVKLPKFLNEPISKLITPKPVVRFQDCIKCGKCKEACPAATIEIGTKGAIIDLSKCIRCYCCHELCPKKAIDVKRNFVFKYVK
>CP026615.2|AVD35321.1|2521581_2522127_-|NADH-peroxidase
MKKFVCTVCGYIHEGDAAPAQCPVCKVGADKFEEMKGEMVWADEHRIGVAQGVDAEIIEGLRANFTGECTEVGMYLAMSRQADREGYPEVAEAYKRIAFEEAEHAAKFAELLGEVVVADTKENLRVRVDAEYGATDGKLKLAKRAKELGLDAIHDTVHEMCKDEARHGKAFLGLLNRYFGK
>CP026615.2|AVD37762.1|2522349_2523264_-|DMT-family-transporter
MKKYFGEIGLIFIAIIWGSGFVATQFALDGGLTPLQIITLRFFLAAIIMNLLFFKQIRANMGKKLLKAGGILGIFLFLAFTVQTIGLMYTTPSKNAFITAANVVIVPFIGFILYRRKLDKIGIISSLVALIGIGILSLEADFSINFGDFLTLICSFGFAFHIFFTSEFAKDNNPMALTAIQFTVAFLMSVIVQAFAGQLKMEAELSGYMGTMYLAVFSTTIGFLFQTICQKRVDGTRTAIILSTEAVFGTIFSIIILKELITAKLVIGSILIFVAIITAETKLSFLKSKKVKLKDSEESSLESI
>CP026615.2|AVD35322.1|2523679_2524561_+|polysaccharide-deacetylase
MVKKRKKKTVALTIIVVIVIGIFSMAWADMSRKKEMKETQERLKAERLEKERIEKEKNEPIIGAKKEAIKEYGYDAKIVWDKLNKYDYSNNGEKIVFLTFDDGPSTTNTPQVLDILKRHGVRGTFFIKGDSLERKGANEILKRTFDEGNAIAHHSYTHDYKKLYPGRSLNLDTFVNELNKTDEAMKKVLGKNFSSNVVRCPGGYMSWKNMEPLGNYLKEKNMASIDWNALNADAEGKKKNAQELFEHAKKSSEGKEMVVLLMHDTYGKQETVNALDQIITYFKDNGYQFKILI

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Crispr_ID: CP026615_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026615_10

2849402-2850028

Orphan

I-A

Consensus_repeat	Method
GTTTTATATTAACTAAGTGGTATGTAAAG	PILER-CR
CTTTACATACCACTTAGTTAATATAAAAC	CRISPRCasFinder
CTTTACATACCACTTAGTTAATATAAAAC	CRT

9 spacers

The CRISPR arrays of CP026615_10

>merge|CP026615|10|2849402-2850028|PILER-CR,CRISPRCasFinder,CRT
CTTTACATACCACTTAGTTAATATAAAACAATATTTATCTTGTTTCAATGCTTCTATACATATTTCCTTTACATACCACTTAGTTAATATAAAACAAGATAAAAGTGAAATATCTGAATATATAGAAAAACTCTTTACATACCACTTAGTTAATATAAAACCACCATTAATTAAGGGGCAATTTAGCCTTGCAAATTTCTTTACATACCACTTAATTAATATAAAACTGTCCCAAAATAGCATCATTACTTTAAGTTCAGCATTCTTTACATACCACTTAGTTAATATAAAACCAATATCCATTTCTCCTTTTCCAGCAATATTAAATTTCTTTACATACCACTTAGTTAATATAAAACGAGTGTATGCTGAATATGGTTTAAGAAGTCCTGACATACTTTACATACCACTTAGTTAATATAAAACGTCTTTTCAATCTGTTCAACTACCTTAGGTTCATTCAGCTTTACATACCACTTAGTTAATATAAAACCTTATACTTCCGTTATTAAACATCATATCTGCTATTATCTTTACATACCACTTAGTTAATATAAAACGGCAATCCCTTAACCATAGCCAACTATTTAATTTTGAGCTTTACATACCACTTAGTTAATATAAAAC

>CP026615|10|7|2849402-2850028|PILER-CR
CTTTACATACCACTTAGTTAATATAAAAC	AATATTTATCTTGTTTCAATGCTTCTATACATATTTC
CTTTACATACCACTTAGTTAATATAAAAC	AAGATAAAAGTGAAATATCTGAATATATAGAAAAACT
CTTTACATACCACTTAGTTAATATAAAAC	CACCATTAATTAAGGGGCAATTTAGCCTTGCAAATTT
CTTTACATACCACTTAATTAATATAAAAC	TGTCCCAAAATAGCATCATTACTTTAAGTTCAGCATT
CTTTACATACCACTTAGTTAATATAAAAC	CAATATCCATTTCTCCTTTTCCAGCAATATTAAATTT
CTTTACATACCACTTAGTTAATATAAAAC	GAGTGTATGCTGAATATGGTTTAAGAAGTCCTGACATA
CTTTACATACCACTTAGTTAATATAAAAC	GTCTTTTCAATCTGTTCAACTACCTTAGGTTCATTCAG
CTTTACATACCACTTAGTTAATATAAAAC	CTTATACTTCCGTTATTAAACATCATATCTGCTATTAT
CTTTACATACCACTTAGTTAATATAAAAC	GGCAATCCCTTAACCATAGCCAACTATTTAATTTTGAG
CTTTACATACCACTTAGTTAATATAAAAC

>CP026615|10|10|2849402-2850028|CRISPRCasFinder
CTTTACATACCACTTAGTTAATATAAAAC	AATATTTATCTTGTTTCAATGCTTCTATACATATTTC
CTTTACATACCACTTAGTTAATATAAAAC	AAGATAAAAGTGAAATATCTGAATATATAGAAAAACT
CTTTACATACCACTTAGTTAATATAAAAC	CACCATTAATTAAGGGGCAATTTAGCCTTGCAAATTT
CTTTACATACCACTTAATTAATATAAAAC	TGTCCCAAAATAGCATCATTACTTTAAGTTCAGCATT
CTTTACATACCACTTAGTTAATATAAAAC	CAATATCCATTTCTCCTTTTCCAGCAATATTAAATTT
CTTTACATACCACTTAGTTAATATAAAAC	GAGTGTATGCTGAATATGGTTTAAGAAGTCCTGACATA
CTTTACATACCACTTAGTTAATATAAAAC	GTCTTTTCAATCTGTTCAACTACCTTAGGTTCATTCAG
CTTTACATACCACTTAGTTAATATAAAAC	CTTATACTTCCGTTATTAAACATCATATCTGCTATTAT
CTTTACATACCACTTAGTTAATATAAAAC	GGCAATCCCTTAACCATAGCCAACTATTTAATTTTGAG
CTTTACATACCACTTAGTTAATATAAAAC

>CP026615|10|6|2849402-2850028|CRT
CTTTACATACCACTTAGTTAATATAAAAC	AATATTTATCTTGTTTCAATGCTTCTATACATATTTC
CTTTACATACCACTTAGTTAATATAAAAC	AAGATAAAAGTGAAATATCTGAATATATAGAAAAACT
CTTTACATACCACTTAGTTAATATAAAAC	CACCATTAATTAAGGGGCAATTTAGCCTTGCAAATTT
CTTTACATACCACTTAATTAATATAAAAC	TGTCCCAAAATAGCATCATTACTTTAAGTTCAGCATT
CTTTACATACCACTTAGTTAATATAAAAC	CAATATCCATTTCTCCTTTTCCAGCAATATTAAATTT
CTTTACATACCACTTAGTTAATATAAAAC	GAGTGTATGCTGAATATGGTTTAAGAAGTCCTGACATA
CTTTACATACCACTTAGTTAATATAAAAC	GTCTTTTCAATCTGTTCAACTACCTTAGGTTCATTCAG
CTTTACATACCACTTAGTTAATATAAAAC	CTTATACTTCCGTTATTAAACATCATATCTGCTATTAT
CTTTACATACCACTTAGTTAATATAAAAC	GGCAATCCCTTAACCATAGCCAACTATTTAATTTTGAG
CTTTACATACCACTTAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP026615.2\|AVD35598.1\|2844051_2844468_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|180266
CP026615.2\|AVD35616.1\|2860119_2861460_-\|pyrimidine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|274244
CP026615.2\|AVD35601.1\|2846308_2846473_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366353
CP026615.2\|AVD35604.1\|2847289_2847949_+\|DUF4386-family-protein	unknown	unknown	unknown
CP026615.2\|AVD35600.1\|2845263_2845773_-\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417
CP026615.2\|AVD35611.1\|2853089_2854604_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|238206
CP026615.2\|AVD35599.1\|2844960_2845155_+\|DNA-directed-RNA-polymerase	unknown	unknown	unknown
CP026615.2\|AVD35610.1\|2852095_2852908_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD35617.1\|2861647_2862460_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|350160
CP026615.2\|AVD35613.1\|2856747_2857995_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
CP026615.2\|AVD35605.1\|2848406_2848595_+\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD35615.1\|2858827_2859907_-\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|376862
CP026615.2\|AVD35603.1\|2846796_2847234_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
CP026615.2\|AVD35608.1\|2850314_2850473_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD35602.1\|2846488_2846656_+\|conjugal-transfer-protein	unknown	unknown	gnl\|CDD\|372237
CP026615.2\|AVD35614.1\|2857981_2858656_-\|O-methyltransferase	unknown	unknown	gnl\|CDD\|226607
CP026615.2\|AVD35609.1\|2850610_2852056_-\|cell-wall-binding-repeat-containing-protein	unknown	unknown	gnl\|CDD\|380277
CP026615.2\|AVD35607.1\|2849189_2849324_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
CP026615.2\|AVD35612.1\|2855011_2856676_-\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|223839
CP026615.2\|AVD35606.1\|2848759_2849011_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP026615.2\|AVD35598.1\|2844051_2844468_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|180266	PRK05803, PRK05803, RNA polymerase sporulation sigma factor SigK.	1.7187e-70
CP026615.2\|AVD35616.1\|2860119_2861460_-\|pyrimidine-nucleoside-phosphorylase	gnl\|CDD\|274244	TIGR02644, Thymidine_phosphorylase, pyrimidine-nucleoside phosphorylase. In general, members of this protein family are designated pyrimidine-nucleoside phosphorylase, enzyme family EC 2.4.2.2, as in Bacillus subtilis, and more narrowly as the enzyme family EC 2.4.2.4, thymidine phosphorylase (alternate name: pyrimidine phosphorylase), as in Escherichia coli. The set of proteins encompassed by this model is designated subfamily rather than equivalog for this reason; the protein name from this model should be used when TIGR02643 does not score above trusted cutoff. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0
CP026615.2\|AVD35601.1\|2846308_2846473_+\|hypothetical-protein	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.40608e-06
CP026615.2\|AVD35607.1\|2849189_2849324_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	0.00050055
CP026615.2\|AVD35600.1\|2845263_2845773_-\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	1.07615e-16
CP026615.2\|AVD35611.1\|2853089_2854604_+\|recombinase-family-protein	gnl\|CDD\|238206	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain. These enzymes perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase. Serine recombinases demonstrate functional versatility and include resolvases, invertases, integrases, and transposases. Resolvases and invertases (i.e. Tn3, gamma-delta, Tn5044 resolvases, Gin and Hin invertases) in this family contain a C-terminal DNA binding domain and comprise a major phylogenic group. Also included are phage- and bacterial-encoded recombinases such as phiC31 integrase, SpoIVCA excisionase, and Tn4451 TnpX transposase. These integrases and transposases have larger C-terminal domains compared to resolvases/invertases and are referred to as large serine recombinases. Also belonging to this family are proteins with N-terminal DNA binding domains similar to IS607- and IS1535-transposases from Helicobacter and Mycobacterium.	7.13593e-29
CP026615.2\|AVD35617.1\|2861647_2862460_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|350160	cd09009, PNP-EcPNPII_like, purine nucleoside phosphorylases similar to human PNP and Escherichia coli PNP-II (XapA). Human PNP catalyzes the reversible phosphorolysis of the purine nucleosides and deoxynucleosides inosine, guanosine, deoxyinosine, and deoxyguanosine. Patients with PNP deficiency typically present with severe immunodeficiency, neurological dysfunction, and autoimmunity. Escherichia coli PNPII, product of the xapA/pndA gene, catalyzes the phosphorolysis of xanthosine, inosine and guanosine with equal efficiency and has been referred to as xanthosine phosphorylase and inosine-guanosine phosphorylase. E. coli PNPII is also capable of converting nicotinamide to nicotinamide riboside, and may be involved in the NAD+ salvage pathway. It is one of two purine nucleoside phosphorylases found in E. coli, which also contains PNPI, which displays a different substrate specificity and belongs to a different subgroup of the nucleoside phosphorylase-I (NP-I) family than PNPII. NP-I family members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	2.44708e-173
CP026615.2\|AVD35613.1\|2856747_2857995_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	4.85095e-146
CP026615.2\|AVD35612.1\|2855011_2856676_-\|penicillin-binding-protein-2	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	5.95773e-97
CP026615.2\|AVD35615.1\|2858827_2859907_-\|endolytic-transglycosylase-MltG	gnl\|CDD\|376862	pfam02618, YceG, YceG-like family. This family of proteins is found in bacteria. Proteins in this family are typically between 332 and 389 amino acids in length. This family was previously incorrectly annotated and names as aminodeoxychorismate lyase. The structure of YceG was solved by X-ray crystallography.	1.61962e-116
CP026615.2\|AVD35603.1\|2846796_2847234_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	8.13782e-10
CP026615.2\|AVD35602.1\|2846488_2846656_+\|conjugal-transfer-protein	gnl\|CDD\|372237	pfam12642, TpcC, Conjugative transposon protein TcpC. This family of proteins are annotated as conjugative transposon protein TcpC. The transfer clostridial plasmid (tcp) locus is part of some conjugative antibiotic resistance and virulence plasmids. TcpC was one of five genes whose products had low-level sequence identity to Tn916 proteins, having similarity to ORF13 homologs from Tn916, Tn5397, and CW459tet. This family of proteins is found in bacteria. Proteins in this family are typically between 302 and 351 amino acids in length.	0.00147936
CP026615.2\|AVD35609.1\|2850610_2852056_-\|cell-wall-binding-repeat-containing-protein	gnl\|CDD\|380277	NF033435, S-layer_Clost, S-layer protein SlpA. In Clostridiodes difficile, the S-layer protein precursor, SlpA, is one member of a large paralogous family of protein that share several cell wall-binding repeats. SlpA is cleaved into a larger and smaller protein. The S-layer protein itself is important to adhesion, and portions of it are highly variable, and then N-terminal and C-terminal are well-conserved.	6.77802e-19
CP026615.2\|AVD35614.1\|2857981_2858656_-\|O-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	4.81502e-60

>CP026615.2|AVD35607.1|2849189_2849324_+|XRE-family-transcriptional-regulator
MFEKTNINTSVMNIIESDERPIRDDELIIFAKIFGVSINYILGL
>CP026615.2|AVD35606.1|2848759_2849011_-|hypothetical-protein
MSSYFITRGDVMKILQQFKPYKYDKEKNIEYDEKIIANQNTEVYIVYPRISDEENRRRWEEFNEVAKEVAINIAMKKVETVES
>CP026615.2|AVD35605.1|2848406_2848595_+|hypothetical-protein
MIGFKKRDTKYLLKIVARAHGISVAEAIVEMQTTINNARNNPDPEKQAEFIISLNTIFTKNL
>CP026615.2|AVD35604.1|2847289_2847949_+|DUF4386-family-protein
MNIVVGVLSILSAFCIAGSMIGLMFSFGYPKIIRENPIIILKRMQNKKTMISLLFYLFGIGGFMVVQASIALRFIEQSKGEFIWSNFAYINGIIYGVLLFVGILRYTKTFPMLSNQMINKQITEKEAGQLYKVLNTYIGETMTEHVAFVFLSFMIFCNSMSLLSINYVANWIGLLGIIIAIGLFIGNLEFLGIKKLFIVNRVFSSLSAFWLLLLGICII
>CP026615.2|AVD35603.1|2846796_2847234_+|MarR-family-transcriptional-regulator
MEEHEIFNTFVQILNWASERNKNSKSYGTDDKLYIAEIHTLVMIGKMPGILQKELCKEVGVTKGRMSVIIAHLQEKNLIEMRREQGNGCTIPIYLTTLGEQIYHNHNEQEMNMKIQIYQVLSKCSQEEIEKFNGILRDILEILRQ
>CP026615.2|AVD35602.1|2846488_2846656_+|conjugal-transfer-protein
MFKKKENEKKVIKQKNSRTMKIGLSVKFIDNQTKVTQISQFELRIHKDSNWKMLK
>CP026615.2|AVD35601.1|2846308_2846473_+|hypothetical-protein
MFFHSTYNNGSYISHIGIYIGNNHMYHVNNPIGYADLTSAYLQQHLIGAGRIKQ
>CP026615.2|AVD35600.1|2845263_2845773_-|VanZ-family-protein
MKSKKYNITKGLFIVYIIILTWIILFKLQFDVSSIETMNLRSINLVPFAGSLIINNKVDISEIILNVAIFIPFGIYICMLKEEWSFIKKVIPIFITSLAFETLQYIFALGASDITDLIGNTLGGIIGIAVFMLLSKIFKNNTIKIINILAFIVTIIVVLFLGLVIFANL
>CP026615.2|AVD35599.1|2844960_2845155_+|DNA-directed-RNA-polymerase
MSVIVMCSRCGKEIDKYRNKYITYYEKNTNAEIKVCINCALDLLEKTRENQELNIQEFQDTIIL
>CP026615.2|AVD35598.1|2844051_2844468_+|sigma-70-family-RNA-polymerase-sigma-factor
MAALKSFEKPLTPEEEIEYLTKFKIENDKSAKDTLIERNMRLVAYIAKKYNNSTEDQDDLISIGTIGLIKAIETYNIDKGTRLATYASRCIENEILMNIRSNKKNKTQVSLQDPIGTDKEGNEIHTTFYMLFSTIIYI
>CP026615.2|AVD35608.1|2850314_2850473_-|hypothetical-protein
MDNFLLSILASILASYIVYLISKLFRKRKKPLKAGTKSGWELDFKIKFHKFK
>CP026615.2|AVD35609.1|2850610_2852056_-|cell-wall-binding-repeat-containing-protein
MKIKKLLTIGLSLSMFIASCHISANALDKIESIKGADKYETTGIIADKQNYTTAILINADSTMADGLSASGLAGATNAPILLTKKNNIPNATLKRLEKAKKVYIIGGENSIDKYTETVLKGKGIEIKRLQGSDRIKTSYNVAKEINSINKVNKVILTNAFKGEPDAMSAAPVAVREKAAIVLTDGKSVPFNTTGVESYVIGGTSSMNDKLVNDTNSTRLGGTDRYDTNKKIINKFYGGVKEFYIASGTDLVYALVGSTVAKNNAIVLVNNDSNKSVLKSTTKLTAIGNLSDSILQQCLNVTKNIGDSNTGRQYTVEDAANAVKKLLGVKKFYYNENYPEDEDVIFLLDENFEFSGKQFYAFGYVTENSEGDVRYCVEKNDMSKVYTYNVSGVMQVCNPDDYKKKEMISEEKAKQLALEECARKHKVGVDLLKVNIAYIDDFDDIKVYAVRIDSKPHPNQTYGWYFIDVYSGYAYKDVWNNI
>CP026615.2|AVD35610.1|2852095_2852908_-|hypothetical-protein
MCNFKKILGLFMIIMLSVSMVACSSGGDSKDESKGKDKQFIEDLGKGLKKRWDLASKEEAGTLNLEQNEAYEKFVEVEMDAVSKYKDAEFDSPELGKLAKDYIKALEDSKEAIKYYSNDQLKFSELWEKPYNERSTILLTLVDKFGLKVDEKEFKVLKDNAQIVNEENDLKEKVNAMAKGIKFEKVKDEYDWKTYQATVENTSDLDLQDFYLDINLIDKDGVIIETQTSTSVNGTWKKGQKVRLEFSTDKDFEKIEWTPHYSANNYSITE
>CP026615.2|AVD35611.1|2853089_2854604_+|recombinase-family-protein
MSVAIYLRKSRADEEAEKQGEFETLSRHKSTLLKLAKEQSLDVIEIKEELVSGESIIHRPKMLELLKEVEENKYDAVLVMDLDRLGRGDMKDQGIILETFKESKTKIITPRKTYDLTDEFDEEYSEFEAFMARKELKLISRRMQRGRIKSVEEGNFIGTSAPFGYDAVTTGRKERILVPNKDADIVRTIFDLYINEDMGCSKISKYLNNLGIKTATGANWYNSAITNIIKNKVYCGYIQWQKKDYKKSKNPNKIKTVKLRPKDEWIEAKGKHEPLISEITWKKAQNILKKNGHVSYGNQIKNPLAGIVICKNCGRPLVYRPYADHNYIICYHPGCNKSSRFEFIEAAILKSLEDTVKKYQLKTSDIDLDKNNKDSNIEFQKRVLKGLETELKELSKQKNKLYDLLERGIYDEDTFIERSNNISSRTEEIKDSIKTVKNRLSTVKKDNAKIIEDIKTVLSLYHDSDSLGKNKLLKSVIDKAVYYKSKEQKLDSFELMVHLKLHED
>CP026615.2|AVD35612.1|2855011_2856676_-|penicillin-binding-protein-2
MSKKKTPFLKKVGKRSWCVFTIILIIYSALIYRLVDIQVLKGDKYKQSVESQSVEKVELNSGRGIIYDRNNKKLTDTSKYQVLVVEKEKLNNNYKILELIKKATKMNDLDIYKAVQEQLTRPIIQIQAKNIDKNMKKELEKNGIMIEEKTMRYSKDGLLSHTIGYIKEDDKSGQSGIEKSMDSVLRNSNEKYISAFKAGDAGNEKSLNILKGSVKTIDNKDKDRHLKTTIDYNIQRKLEQILNKEENPTAAIISEVSTGEILAMCSRPNFDQNDISKSLKGKNGEFENRVIKATYPPGSVFKMVVLFSALENGVIDENYTYNCTGKTKVGNTNEILRCNKRDGHGFQNLRQAFSNSCNPAFLDIAMKLGKEKILKSAEKLHLFEKVDIGLDEEKIREAPKNISIRNLAIGQENIEFTPLQINQMTQIMANNGTFKPLYLYKSLVDNDMNTIKTYKSSKKEELISPYVCTQVKEYMKSVSRTGTAKDLKDIEGGCGVKTGTAQSSLNKKAIDHGWITGFYPEERPKYVITVLVEGTQKGNKSATPIFKEICESIQ
>CP026615.2|AVD35613.1|2856747_2857995_-|U32-family-peptidase
MELNKVELLAPAGDLERLKIAITYGADAVYIGGEIFGMRSAAKNFSKEDMAEGVAFAHERGKKVFVTVNIIPHNEDFLQLEDYLLELEEIGIDAVIIADPGVLSVIKKVIPNMEIHLSTQANTTNYLSANFWYEHGIKRVVVARELSFDEISEIRAKTPLDMDIEAFMHGAMCISYSGRCLISNYMTGRDANKGSCAQSCRWQYHLVEEKRPGEYFPIYEDERGTFFFNSKDLCMIEYIPELIKSGITSLKIEGRMKTAYYVATVVRAYRMAIDEFYKDPENWKFNPMWMEELKKGSHRHFTSGFYLNKPTTEDQNYQSASYVRNYDFIGIVRETEDEDGLIVVEQRNKMCVGDEIEVMGPYKETMFTKIEAMYNEEGEAIESAPHPRQIVKLKLSVKVGKDYMLRKVIEEKVEE
>CP026615.2|AVD35614.1|2857981_2858656_-|O-methyltransferase
MSNIVNDLVEDYIRVTLKEKEGFLKDLEIYAEENSVPIIHKEVSDLLKVLLKIQKPKRVLEVGCAIGYSSIFFATIIGKDADIITVERNEKMIEKAKENIKLAGFENNITILEGDAEEKLSQVQGEFDLIFIDAAKGQYKLFFDLVIDKLKDGGLLVSDNILYKGMVAHDDFVVRRKKTIVKRMRNYLDYICNCDYLSTSLIPIGDGVALSYKESKRGDVDGIK
>CP026615.2|AVD35615.1|2858827_2859907_-|endolytic-transglycosylase-MltG
MNFKENRLKIAALIIVILIILAGIFVSMQIGPYNKNNKKDVIIDIPNGASIGKISDILYENKLIKNELLFKLLVKVSNKAPSIKSGTYLLNQSYSNNDIISLLVSGKIYQDGIKVTIPEGATSKEIIAMLVSKNLGDKATFENLIKKPQEFYDKFPYLKEDGITSLEGFLYPETYYFNSKKQSEEDILSEMLKVFDSKYTDKFKKKQKKLNMTLQEVMEMASIIEKEAVLDKDRPIIASVFYNRLKVGMPLQSDATIQYIFEERKKIVTYDDLKIDSPYNSYKNKGLPPTPISNPGIKSIEAALYPDKTDYLYFVAKIDGGNNYSTNYQDHLKYVKEYKEARDKQSKDTKATNKENTKK
>CP026615.2|AVD35616.1|2860119_2861460_-|pyrimidine-nucleoside-phosphorylase
MEISIMRMYDIIRKKRDNLELSKKEINYFIENYSKGDIPDYQASALLMSIYLNKMNKQETVHLTEAMMNSGDMINLSEIDGIKVDKHSTGGVGDKTTIALIPLVASCGAPVAKMSGRGLGHTGGTIDKLESIPGFSTEMEISKFINSVNKSKIAVCGQSAKVAIADKKIYALRDVTATVDNISLIASSVMSKKLASGADAIVLDVKTGDGAFMKTLEESFDLAKSMVDIGTGMNRDTIGIVTDMDEPLGFAVGNSLEVIEAIETLKGNGPKDLVELCEVLGAYMLVLSKVAYDFDDGVEKIRESIKSGDAIHKLKEFIENQGGNKDVVDDYSLFKKSKYKYPVKSTKSGYINKIKAEDVGVSAMILGAGRETKDDVLDLSVGIILEKKVGDYINEGEVLAYMYYNDEQKLSLAKDRFIDSYSIVDSKVEKNKLIYGIVTKEGIKKF
>CP026615.2|AVD35617.1|2861647_2862460_-|purine-nucleoside-phosphorylase
MFEKIAQSSKFINAKINIKPKIGLILGSGLGDLANDIEDSVTIKYSEIPNFPISTVAGHAGQLVIGKLEGKEVIAMQGRFHYYEGYSQKEATFPVRVMKELGVEVLIVTNAAGGVNKEFKAGDLMLIRDHINFSGSNPLVGKNDDRLGDRFPDMSDAYSSRYVDVVKNCAKECNIDVKEGVYMFFSGPNYETPAEVRMAQILGADAVGMSTVPEVIVASHSNIGVIGISCITNMAAGILNQSLSHEEVIETTQKVKSEFMNLVKTTVKNL

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Crispr_ID: CP026615_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026615_12

3944591-3944670

Orphan

Consensus_repeat	Method
TTATAATATTATCCACATTATAAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026615_12

>merge|CP026615|12|3944591-3944670|CRISPRCasFinder
TTATAATATTATCCACATTATAAACAGTTGATTCATATTGCTTTAACTTATTACATTAAATATTATCCACATTATAAACA

>CP026615|12|12|3944591-3944670|CRISPRCasFinder
TTATAATATTATCCACATTATAAACA	GTTGATTCATATTGCTTTAACTTATTAC
ATTAAATATTATCCACATTATAAACA

Protein	Signature genes	Signature genes Name	Protein_function
CP026615.2\|AVD36513.1\|3965050_3965854_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
CP026615.2\|AVD36509.1\|3962101_3962806_-\|N-acetylmuramoyl-L-alanine-amidase-CwlD	unknown	unknown	gnl\|CDD\|274337
CP026615.2\|AVD36514.1\|3965847_3966714_-\|energy-coupling-factor-transporter-ATPase	unknown	unknown	gnl\|CDD\|237455
CP026615.2\|AVD36511.1\|3963735_3964167_-\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
CP026615.2\|AVD36501.1\|3927917_3928997_-\|butyrate-kinase	unknown	unknown	gnl\|CDD\|235099
CP026615.2\|AVD36500.1\|3927250_3927928_-\|ATP-binding-protein	unknown	unknown	unknown
CP026615.2\|AVD36497.1\|3925132_3925885_-\|2-oxoglutarate-oxidoreductase	unknown	unknown	gnl\|CDD\|239470
CP026615.2\|AVD36508.1\|3948434_3949619_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235596
CP026615.2\|AVD36498.1\|3925884_3926964_-\|3-methyl-2-oxobutanoate-dehydrogenase-subunit-VorB	unknown	unknown	gnl\|CDD\|235942
CP026615.2\|AVD36505.1\|3931402_3932242_-\|TIGR00159-family-protein	unknown	unknown	gnl\|CDD\|224539
CP026615.2\|AVD36510.1\|3963314_3963707_-\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
CP026615.2\|AVD36504.1\|3930224_3931406_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227193
CP026615.2\|AVD36515.1\|3966701_3967535_-\|energy-coupling-factor-transporter-ATPase	unknown	unknown	gnl\|CDD\|275313
CP026615.2\|AVD36503.1\|3930108_3930228_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD36499.1\|3926992_3927208_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|225131
CP026615.2\|AVD36506.1\|3945149_3945689_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274161
CP026615.2\|AVD36496.1\|3924574_3925132_-\|2-oxoacid:ferredoxin-oxidoreductase-subunit-gamma	unknown	unknown	gnl\|CDD\|376567
CP026615.2\|AVD36507.1\|3945710_3948062_-\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|235937
CP026615.2\|AVD36502.1\|3929018_3929921_-\|phosphate-butyryltransferase	unknown	unknown	gnl\|CDD\|180267
CP026615.2\|AVD36512.1\|3964286_3965018_-\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577

Protein	Function_ID	Function_description	E-value
CP026615.2\|AVD36513.1\|3965050_3965854_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	8.11538e-50
CP026615.2\|AVD36509.1\|3962101_3962806_-\|N-acetylmuramoyl-L-alanine-amidase-CwlD	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	2.54204e-77
CP026615.2\|AVD36514.1\|3965847_3966714_-\|energy-coupling-factor-transporter-ATPase	gnl\|CDD\|237455	PRK13637, cbiO, energy-coupling factor transporter ATPase.	0
CP026615.2\|AVD36511.1\|3963735_3964167_-\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.05591e-98
CP026615.2\|AVD36508.1\|3948434_3949619_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	7.27196e-180
CP026615.2\|AVD36501.1\|3927917_3928997_-\|butyrate-kinase	gnl\|CDD\|235099	PRK03011, PRK03011, butyrate kinase; Provisional.	0
CP026615.2\|AVD36497.1\|3925132_3925885_-\|2-oxoglutarate-oxidoreductase	gnl\|CDD\|239470	cd03375, TPP_OGFOR, Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor. In the TCA cycle, OGFOR catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA. In the reductive tricarboxylic acid cycle found in the anaerobic autotroph Hydrogenobacter thermophilus, OGFOR catalyzes the reductive carboxylation of succinyl-CoA to produce 2-oxoglutarate. Thauera aromatica OGFOR has been shown to provide reduced ferredoxin to benzoyl-CoA reductase, a key enzyme in the anaerobic metabolism of aromatic compounds. OGFOR is dependent on TPP and a divalent metal cation for activity.	1.15077e-77
CP026615.2\|AVD36498.1\|3925884_3926964_-\|3-methyl-2-oxobutanoate-dehydrogenase-subunit-VorB	gnl\|CDD\|235942	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated.	0
CP026615.2\|AVD36505.1\|3931402_3932242_-\|TIGR00159-family-protein	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	1.4029e-80
CP026615.2\|AVD36510.1\|3963314_3963707_-\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.31674e-84
CP026615.2\|AVD36504.1\|3930224_3931406_-\|hypothetical-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	2.38896e-22
CP026615.2\|AVD36515.1\|3966701_3967535_-\|energy-coupling-factor-transporter-ATPase	gnl\|CDD\|275313	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the upstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	4.67177e-174
CP026615.2\|AVD36499.1\|3926992_3927208_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|225131	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion].	6.6539e-10
CP026615.2\|AVD36506.1\|3945149_3945689_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274161	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055) and utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487). The two components form an alpha-2/beta-2 heterodimer. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism, Protein fate, Protein modification and repair].	1.03956e-50
CP026615.2\|AVD36496.1\|3924574_3925132_-\|2-oxoacid:ferredoxin-oxidoreductase-subunit-gamma	gnl\|CDD\|376567	pfam01558, POR, Pyruvate ferredoxin/flavodoxin oxidoreductase. This family includes a region of the large protein pyruvate-flavodoxin oxidoreductase and the whole pyruvate ferredoxin oxidoreductase gamma subunit protein. It is not known whether the gamma subunit has a catalytic or regulatory role. Pyruvate oxidoreductase (POR) catalyzes the final step in the fermentation of carbohydrates in anaerobic microorganisms. This involves the oxidative decarboxylation of pyruvate with the participation of thiamine followed by the transfer of an acetyl moiety to coenzyme A for the synthesis of acetyl-CoA. The family also includes pyruvate flavodoxin oxidoreductase as encoded by the nifJ gene in cyanobacterium which is required for growth on molecular nitrogen when iron is limited.	1.49735e-43
CP026615.2\|AVD36507.1\|3945710_3948062_-\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|235937	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
CP026615.2\|AVD36502.1\|3929018_3929921_-\|phosphate-butyryltransferase	gnl\|CDD\|180267	PRK05805, PRK05805, phosphate butyryltransferase; Validated.	1.26101e-179
CP026615.2\|AVD36512.1\|3964286_3965018_-\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	1.99745e-131

>CP026615.2|AVD36505.1|3931402_3932242_-|TIGR00159-family-protein
MLDINSFLNGFFNIILRMSIYDLIDISIVAYIFYKIFMFIKDTRAEQVFKGIIFLLLATQLSNTFKLHTVYWISLKALDYGVIAALIIFQPEFRAGLEHIGRAKFNLFGKNVNTSEETLNRNIEEIVEALYSLSRQKIGALIIMERETRISDIINTGTIIDAEISRQLLINIFIPNTPLHDGAVVIRDSKVKAAACFLPLTESKDLSKDLGTRHRAGIGVSEVSDCITLIVSEETGGVSIAKAGKLYRDISRERMMNILRSNLKTNTETRSFFKGGIFK
>CP026615.2|AVD36504.1|3930224_3931406_-|hypothetical-protein
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMNDLKDKNLVIYPDEKLTADVYIKGSLSKVQSVKKEDIHVHGTIEDPIQGQKEVYLKANIPQGVTIEFKHDVLVVNLEKNIKEKRDIKVEVSGNSKKNINKIELSKEFVDVSGPRTLVKEVKSVRANLDVGNETDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVNLNDNKDNDALKNYKLSKEQVTIKGKKEDIDKINYIKTKPIDLADLANGEEKEVSLEVPEGITLEGASITIKLNDTKQLSAEFLYSAGDIELRNIPTNMDNPSVISDVDIKVVVESTEDLSKLNKKDISLYIDLSQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE
>CP026615.2|AVD36503.1|3930108_3930228_-|hypothetical-protein
MNKYFEYLVVTRCDKKTYKIKFVNFMFLLHLVYFSYIIK
>CP026615.2|AVD36502.1|3929018_3929921_-|phosphate-butyryltransferase
MRSFEEVIKFAKERGPKTISVACCQDKEVLMAVEMARKEKIANAILVGDIEKTKEIAKSIDMDIENYELIDIKDLAEASLKSVELVSQGKADMVMKGLVDTSIILKAVLNKEVGLRTGNVLSHVAVFDVEGYDRLFFVTDAAMNLAPDTNTKKQIIENACTVAHSLDISEPKVAAICAKEKVNPKMKDTVEAKELEEMYERGEIKGCMVGGPFAIDNAVSLEAAKHKGINHPVAGRADILLAPDIEGGNILYKALVFFSKSKNAGVIVGAKAPIILTSRADSEETKLNSIALGVLMAAKA
>CP026615.2|AVD36501.1|3927917_3928997_-|butyrate-kinase
MSKIFKILTINPGSTSTKIAVFDNEDLVFEKTLRHSSEEIGKYEKVSDQFEFRKQVIEEALKEGGVKTSELDAVVGRGGLLKPIKGGTYSVSAAMIEDLKVGVLGEHASNLGGIIAKQIGEEVNVPSYIVDPVVVDELEDVARISGMPEISRASVVHALNQKAIARRYAREINKKYEDINLIVAHMGGGVSVGAHKNGKIVDVANALDGEGPFSPERSGGLPVGALVKMCFSGKYTQDEIKKKIKGNGGLVAYLNTNDAREVEERIEAGDEKAKLVYEAMAYQISKEIGASAAVLKGDVKAILLTGGIAYSKMFTEMIADRVKFIADVKVYPGEDEMIALAQGGLRVLTGEEEAQVYDN
>CP026615.2|AVD36500.1|3927250_3927928_-|ATP-binding-protein
MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPIDSSINAPTLDLPAVSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEGDYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLINNTHLIRFTTIDDVLRGQKVAKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM
>CP026615.2|AVD36499.1|3926992_3927208_-|4Fe-4S-dicluster-domain-containing-protein
MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATMCPDVVITVERD
>CP026615.2|AVD36498.1|3925884_3926964_-|3-methyl-2-oxobutanoate-dehydrogenase-subunit-VorB
MAKILMKGNEAFGKAAIEAGCKYFFGYPITPQSELPEYLSRELPKIGGAFVQAESEVSAINMVYGGAGAGARVMTSSSSPGVALKQEGITYAVGAEVPCVVLNVMRGGPGLGSIQPSQADYFMSTRGGGNGDYRTPVFAPATVQEAVDMIMEAFDVADYYRSPVMVVADGMIGQMMEPVEFRAPEKKRELPPKDWATVGTKGKRKPNVINSLYLEPEVLEDHCWHLQEKFDAMEKNEVQYEMYKTEDAEFVFAAYGTTSRVVKSAIDILREEGIKAGLIRPKVLWPFPFEAFNQIPNARNILTVEMSMGQMVEDVKMAVEGRLPVYFHGRPGGMTPTPAEIVEKAKKIIAGELVAGGAR
>CP026615.2|AVD36497.1|3925132_3925885_-|2-oxoglutarate-oxidoreductase
MAVVFKKTEGLQDTQTHYCPGCTHGIIHRLVGEVLEELGVLGDAVGVVPVGCSVLGYKYFNCDTQEAAHGRAPAAATGIKRVHPENTVFTYQGDGDLASIGTAEIVHAAARGEKITTIFVNNTTYGMTGGQMAPTTLVGQRATTAQSGRNAETQGYPIRVSEMLATLTGAVFVERVAVDTPAHVRQAKKAIKKAFQVQQAGLGFGIVEVLSTCPTNWGLAPNDALQWLRDNMIPYYPLGNFKNVEVEEVK
>CP026615.2|AVD36496.1|3924574_3925132_-|2-oxoacid:ferredoxin-oxidoreductase-subunit-gamma
MSTARVICAGFGGQGVMSMGQLLTYAGMLEGKEVSWLPSYGPEMRGGTANCAVTVSNEPVGSPLITDDATAAILLNIPAFEKFKDDVIPGGKIIVNSSLIKEKVDRTDVDVYYIPANELAAELGNDKVANMIMLGAYLKVSDTVDIESVLEAFKKVFGPRKEKFVPLNREALQKGMDATCSKATN
>CP026615.2|AVD36506.1|3945149_3945689_-|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MKIRMSSTISYDSIVDGPGLRMVIWTQGCIHNCKECHNPQTHDLCGGFYMDTEEIINKVKSLKLQKGITLSGGEPFLQPEPLEVIAREAKTNGLDVWSYTGFTFEQLLDKRNSAYFKNLNLLKQIDILVDGKFVAEKKDISLKFRGSSNQRIIDVQKSLKYKKVFLVEQYMKDDLSIAE
>CP026615.2|AVD36507.1|3945710_3948062_-|anaerobic-ribonucleoside-triphosphate-reductase
MVEFVKKRDGRVIPFNEDRITRAIFLAATNVAEREGIVPDYKLSEQLTQEVIKFLNHKYSESVPSVEDIQDSVVKVLIETGHAKTSEEYIIYRTERSRIRNSKTRLMKAIEEITFEDAEDADIKRENANINGNTAMGTMLQYGSTVSKEFCKTHILKPEHSFAHDNGDIHIHDMDFLNMGTLTCCQIDVKKLFNGGFSTGHGFLREPQDIISYGALAAIAIQSNQNDQHGGQSIPFFDYGLAEGVYKTFKKFYIGNLAKALKLFKGIENNDVIKNIVYNTEKETNQKVGLKRDELYLNLEKEKLIQTFDIDEELVNKMQNFAFEESYKETDKKTYQSMEAFIHNLNTMHSRAGAQVPFSSVNFGTDTSEEGRMVTKNLLLSQERGLGNGETPIFPILIFKVKEGINLNPEDPNYDLFKLSCRVSAKRLFPNFSFLDAPFNAKYYKKGEPDTEATYMGCRTRVLSNVCGSETVSGRGNISFTTVNLPRLGIKHGIINNEKANLDGFFEELDEKINLIIEQLLERLEVQGNKKMKNFPFLMGQGVWKGSDELGPEDTLKEVIKQGTLTIGFIGLAECLIALIGKHHGESKEAQELGLKIVSHMRDKMDEATDKYKLNFSLMGTPAEGLSGRFTKIDKKVYGEIKGITDKEYYTNSFHVPVYYNISAYDKIEIEAPYHELTNAGHITYVELDGDPSDNLEAFETVIKAMKDLGIGYGSINHPVDRDPICGFSGVITSNICPVCGRNEDESDIKFERIRRITGYLVGTVDRFNNAKKAEVRDRVKHR
>CP026615.2|AVD36508.1|3948434_3949619_+|pyridoxal-phosphate-dependent-aminotransferase
MLSKRLNFITPSYTIGISSKVKEMENNGIKVINLSIGEPDFNVPNNAKSYGIDSLNKDYTKYDLVPGLKILREEICKKLIEENNCKYSIDEIVVSSGAKNSITNTLLALTDEGDEVLLPKPYWVSYPEMVKLVNAVPIFIDTKKENDFKLTKEELEKSITDKTKILVINNPSNPTGSVYTKDELIEIVDVCIQNKIYILADEIYEKICYSGEFTSIASLSEEAKDITITINGFSKSAAMTGLRLGYTASNKAIAKAMSSIQGHLISHPSLTAQYIAYGALKDCSTDIDNMVKTYKSRRDLIKSKLDSIENIGYVNPNGAFYAFIDLSKVSEKFEYKDSFSIEFCNQFLEEYNVAVVPGIAFGMDKYIRISYACSENTFLSGLNKLKEFVYKIMA
>CP026615.2|AVD36509.1|3962101_3962806_-|N-acetylmuramoyl-L-alanine-amidase-CwlD
MRKYIKHIIFSFAMICLVVVSIFEIKNISEDVIKYMPVTNKTIILDAGHGGIDPGALNKDKSTSEKDINLAITLKLRELIESSGGLVILTREDDSSLYKEENNKTTRQKYNENLKNRKEIISNSNANMFVSIHLNAFEQSKYYGAQTFYPKDKQDSKELSKCIQEELKRVVDKTNNREVKPRDDIYLLKENNIPSVLIECGFLSNEKESKLLTDETYQEKIAWAIYIGIQKYLS
>CP026615.2|AVD36510.1|3963314_3963707_-|30S-ribosomal-protein-S9
MANVQYYGTGRRKSSVARVRLVAGEGNILVNGRALENYFNYETLIRDVKQPLVLTGNENKYDVIVKVEGGGFTGQAGAIRHGISRALLKADLDLRPALKKEGFLTRDARMKERKKYGLKAARRAPQFSKR
>CP026615.2|AVD36511.1|3963735_3964167_-|50S-ribosomal-protein-L13
MKSYIAKPADVQRKWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKYYRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEHTHAAQNPEVLNFK
>CP026615.2|AVD36512.1|3964286_3965018_-|tRNA-pseudouridine(38-40)-synthase-TruA
MRNIKITIQYNGKNYCGWQKQLDSLGIQGTIERAIYDITKEKVSLIGSGRTDSGVHAIGQIANFKTNSSISIESIPMALNAKLPKDISVIDACEVNDDFHSRYSAKGKTYKYLVYNSKFRNPILSEISYQVKYELDFDKMCSEAKLLLGTHDFKGFMSSGSSVKDTVRTIYDIDIIRKDDLITFEISGNGFLYNMVRIIVGTLVDIGRGRINEPFLDIIQSKTRSRCGHTAPAQGLFLKKVHY
>CP026615.2|AVD36513.1|3965050_3965854_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MLKDITIGQYYPTSSAIHKLDPRIKLVATIVFMISIFVVNKFWPYIVVLLCLLAMIKLANIPIKYIVKGVKPLKWIILFTFFINIFFLPGDEIWSFGFLTITSQGLRQAIFMAIRLIFLVVGTSLLTLTTSPIELTDGIERLLNPFKKIGLPVHELAMMMTIALRFIPTLLDETDKIMKAQMSRGADFESKNLINRAKNLVPLLVPLFVSAFRRADELAMAMEARCYRGGHNRTKMRESVISRRDYMACVFQVVYLGAIIATRFIAI
>CP026615.2|AVD36514.1|3965847_3966714_-|energy-coupling-factor-transporter-ATPase
MSIIVKNLTHIYNEGMPFASKALDDISFEIKDRDFVGLIGHTGSGKSTLIQHLNGLLKPSSGEIFINDFNITDKNLNLTEIRKRVGVVFQYPEYQLFEETIDKDIAFGPSNLGLEESEIHNRVKASMEAVGLDYEEFKDKSPFELSGGQKRRVAIAGVIAMNPEVLILDEPTAGLDPGGRDEIFNLIKSLHEKKNMTIILSSHSMDDMAKLAKTLIVMNHGSVEFIGTPREVFKSNASKLKDIGLDIPQVLELALKLREKGFDISEDILTLEEAKQEILKVVRGRGLC
>CP026615.2|AVD36515.1|3966701_3967535_-|energy-coupling-factor-transporter-ATPase
MDNIVKVNNISFEYITDEAKLKAIDNLSLDVKKGEFVAIIGHNGSGKSTLSKNLNAILMPTEGNILIDGMNTKEEERLWDIRQTAGMVFQNPDNQIVATIVEEDVAFGPENLGIEPKEIRRIVEESLKSVGMYDLRDRQPHLLSGGQKQRVAIAGIIAMRPKCIIFDEATAMLDPSGRKEVMKTIKRLNKEENITVIHITHFMEEAVEADRVVVMEKGKKILEGTPREVFSKIKMLKEIGLDVPCMTELSSLLIEEGINISGDILTVDEMVMELCRL

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Crispr_ID: CP026615_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026615_13

4062498-4062583

Orphan

Consensus_repeat	Method
AAAGTGCTAACGCACAGCGCCAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026615_13

>merge|CP026615|13|4062498-4062583|CRISPRCasFinder
AAAGTGCTAACGCACAGCGCCAACAAACAAACTTCAGATGCGTTCAGTTTATTCTGTTGCTTAAAGTGCTAATGCACAGCGCCAAC

>CP026615|13|13|4062498-4062583|CRISPRCasFinder
AAAGTGCTAACGCACAGCGCCAAC	AAACAAACTTCAGATGCGTTCAGTTTATTCTGTTGCTT
AAAGTGCTAATGCACAGCGCCAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP026615.2\|AVD36609.1\|4070214_4071486_-\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
CP026615.2\|AVD36602.1\|4054858_4055272_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD36612.1\|4084081_4084855_-\|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274373
CP026615.2\|AVD36604.1\|4065945_4066167_-\|hypothetical-protein	unknown	unknown	unknown
CP026615.2\|AVD36595.1\|4042494_4043868_-\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|236994
CP026615.2\|AVD36605.1\|4066308_4066908_-\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
CP026615.2\|AVD36608.1\|4069437_4069893_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|223663
CP026615.2\|AVD36611.1\|4072837_4073365_-\|transcription-repressor-NadR	unknown	unknown	gnl\|CDD\|224740
CP026615.2\|AVD36600.1\|4048944_4050873_-\|elongation-factor-G	unknown	unknown	gnl\|CDD\|237186
CP026615.2\|AVD36610.1\|4071944_4072826_-\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|182386
CP026615.2\|AVD36607.1\|4067329_4068967_-\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|235505
CP026615.2\|AVD36606.1\|4066920_4067271_-\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669
CP026615.2\|AVD36593.1\|4040238_4041333_-\|PIN/TRAM-domain-containing-protein	unknown	unknown	gnl\|CDD\|227292
CP026615.2\|AVD36599.1\|4048023_4048488_-\|CtsR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226869
CP026615.2\|AVD36596.1\|4044047_4046495_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|223616
CP026615.2\|AVD36603.1\|4064669_4065875_+\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|340861
CP026615.2\|AVD36597.1\|4046481_4047507_-\|protein-arginine-kinase	unknown	unknown	gnl\|CDD\|234894
CP026615.2\|AVD36598.1\|4047522_4048017_-\|DNA-methylase	unknown	unknown	gnl\|CDD\|226397
CP026615.2\|AVD36601.1\|4051114_4054546_-\|pyruvate-carboxylase	unknown	unknown	gnl\|CDD\|237263
CP026615.2\|AVD36594.1\|4041421_4042492_-\|dna-integrity-scanning-protein-disa	unknown	unknown	gnl\|CDD\|237395

Protein	Function_ID	Function_description	E-value
CP026615.2\|AVD36611.1\|4072837_4073365_-\|transcription-repressor-NadR	gnl\|CDD\|224740	COG1827, COG1827, Predicted small molecule binding protein (contains 3H domain) [General function prediction only].	1.08485e-43
CP026615.2\|AVD36609.1\|4070214_4071486_-\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
CP026615.2\|AVD36612.1\|4084081_4084855_-\|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274373	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily. This group of similar sigma-70 factors includes clades found in Bacilli (including the sporulation factors SigF:TIGR02885 and SigG:TIGR02850 as well as SigB:TIGR02941), and the high GC gram positive bacteria (Actinobacteria) where a variable number of them are found depending on the lineage.	6.4918e-87
CP026615.2\|AVD36595.1\|4042494_4043868_-\|DNA-repair-protein-RadA	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
CP026615.2\|AVD36605.1\|4066308_4066908_-\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	6.04881e-129
CP026615.2\|AVD36608.1\|4069437_4069893_-\|nucleoside-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	7.52683e-52
CP026615.2\|AVD36600.1\|4048944_4050873_-\|elongation-factor-G	gnl\|CDD\|237186	PRK12740, PRK12740, elongation factor G-like protein EF-G2.	0
CP026615.2\|AVD36610.1\|4071944_4072826_-\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	1.89288e-61
CP026615.2\|AVD36607.1\|4067329_4068967_-\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|235505	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated.	0
CP026615.2\|AVD36606.1\|4066920_4067271_-\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	1.04649e-45
CP026615.2\|AVD36593.1\|4040238_4041333_-\|PIN/TRAM-domain-containing-protein	gnl\|CDD\|227292	COG4956, COG4956, Integral membrane protein (PIN domain superfamily) [General function prediction only].	9.37001e-140
CP026615.2\|AVD36599.1\|4048023_4048488_-\|CtsR-family-transcriptional-regulator	gnl\|CDD\|226869	COG4463, CtsR, Transcriptional repressor of class III stress genes [Transcription].	1.67585e-42
CP026615.2\|AVD36596.1\|4044047_4046495_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	0
CP026615.2\|AVD36603.1\|4064669_4065875_+\|glycosyl-transferase	gnl\|CDD\|340861	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins. beta-diglucosyldiacylglycerol synthase (processive diacylglycerol beta-glucosyltransferase EC 2.4.1.315) is involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. This family of glycosyltransferases also contains plant major galactolipid synthase (chloroplastic monogalactosyldiacylglycerol synthase 1 EC 2.4.1.46). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	1.3214e-147
CP026615.2\|AVD36597.1\|4046481_4047507_-\|protein-arginine-kinase	gnl\|CDD\|234894	PRK01059, PRK01059, ATP:guanido phosphotransferase; Provisional.	3.36621e-164
CP026615.2\|AVD36598.1\|4047522_4048017_-\|DNA-methylase	gnl\|CDD\|226397	COG3880, COG3880, Modulator of heat shock repressor CtsR, McsA [Signal transduction mechanisms].	2.05547e-43
CP026615.2\|AVD36601.1\|4051114_4054546_-\|pyruvate-carboxylase	gnl\|CDD\|237263	PRK12999, PRK12999, pyruvate carboxylase; Reviewed.	0
CP026615.2\|AVD36594.1\|4041421_4042492_-\|dna-integrity-scanning-protein-disa	gnl\|CDD\|237395	PRK13482, PRK13482, DNA integrity scanning protein DisA; Provisional.	0

>CP026615.2|AVD36602.1|4054858_4055272_-|hypothetical-protein
MYIVIGNEIVDSEELKVIIDKNSKFKVEKDLSKSTKREDVIAYQLSIDLNYLDSLISEQCNLASLSDEEKFDEYMTLSDELALNLEELMPKYTIINARAYKLDEVDGVVKIILAVAYADLGHLKLSDVLMRISRQVD
>CP026615.2|AVD36601.1|4051114_4054546_-|pyruvate-carboxylase
MLKKFNKILVANRGEIAIRIFRACSELGIKSVGIYSKEDKYGLFRTKADESYLIGEGKGPIDAYLDMDGIIDLAKRKKVDAIHPGYGFLAENAEFARKCEENGITFIGPSSKVMNMMGDKINSKKIAKEVNVQTIPGVEKAIRSTEEAKEVANKIGYPVMIKASNGGGGRGMRIVHHEEDLELEYETACSESRKAFGEDIIFIEKYIADPKHIEVQILGDNYGNIVHLYERDCSVQRRHQKIIEYAPAFSLDDKVRKEICEDAVKLSKHVGYSNAGTLEFLVDANGGHYFIEMNTRVQVEHTVTEMVTGIDIVQSQILIAQGYSLDSEEINIKSQDDVEIRGYSIQCRITTEDPKNKFMPDTGKIQVYRTGSGFGIRLDGGNGFTGANISPHYDSLLVKTISWDRTFQGAINKTIRSIKELRVRGVKTNVGFLVNVLNNPIFSNGKCSTKFIDENPDLFEITESKDRGTKLLQFIGDVIVNDNACKEKPLFDALHDPRMDKDGSKAEGSKILFDKLGKSAYIEKIKNDKKLLLTDTTMRDAHQSLLATRIRTYDLLKAAKPTEKYQKDLFSLEMWGGATYDVAYRFLKESPWRRLQKLREEIPSIMFQMLLRASNGVGYKNYPDNVIEEFTKESARQGIDVFRIFDSLNWVENMKPSINTALETGKIVEATMCYTGDILDKTKTKYNLEYYIKMAQELESLGADIIAIKDMSGLLKPYSAYTLVKELKKNIKAPIHLHTHDTSGNGVATCLMASEAGVDIIDAALESMAGLTSQPSLNAIVEALKNTERDTGIDLFGYDELGKYYKDLRKVYSKFESDLTNSCAEIYNFEIPGGQYTNLKPQADSLGLVNRFDEVKEKYKEANEVVGDIIKVTPSSKVVGDLAIFMTKNKLDKDNIIEEGKNLSFPDSVVDYCKGMIGQPEGGIPKDLQEVVLKGEEAITVRPGSLLPEEDFDEIAKYLNEKYDINANIRNVISYALYPKVYEDYIKHLQHYNDISKLESDVFFYGLNKNEECEVEIEEGKVLTIRLVEIGEVKENGFRTIGFELNGMVREVEIKDKNFSGKINNVEKADMNDPLQIGASIPGKVIKIMVKEEDEVKANQPLIVIEAMKMETIIVAKTDGVIKSIKVKEDDMVEDKQLLMIMK
>CP026615.2|AVD36600.1|4048944_4050873_-|elongation-factor-G
MKVYDSKMLRNVAVLGHSGCGKTNLIETIAYTANTNKIPKLTDKVNMTYSMGLIPIEYNDYKFNLLDTPGYFDFSGDVVSSLRASDAAIIVIDATAPIQVGTEKSLELTESIPKIMFINKIDNEKARYKDAIAMLREKYNNKIVPMISPIYKDKNFVKLHNVFENIDDLEGEFKEQAMSVKEALMELIAETDDQILDKYFNGEELTTEEIQKGIIIGIQRGDIIPVICGSTINNIGTKEILDTISNYLEPIFTEESKPFRGLVFKTMVDPFVGKMSYIKITEGVLSKDKDVFNINKNVKEKIANIYTLKNSELVEVEKAKAGDIVVVTKINSLKTGDTISIDKDAEALENIDFPKPQIYYAVTPKNKGDEEKVASVLNRLVEEDPTLHSYRNTETKQALLGGQGELHIKTIKNKMKDKFGVDVELNDLKVPYRETIKGKSDVQGKHKKQSGGHGQYGDVKIRFERCESDFEFAEEIFGGSVPKQYIPAVEKGIKDSMQKGILAGYPVTNIKATLYDGSYHDVDSSEMAFKMAASVAFKKGMEEAHPILLEPIMKLKITVPEEYMGDVMGDINKRRGKIFGMEPDDKGKQIIFAEAPQAETFKYAIDLRAMTQGRGYFEMELERYGEVPSQFAEKIIGLATAK
>CP026615.2|AVD36599.1|4048023_4048488_-|CtsR-family-transcriptional-regulator
MATMTDIIEKFIKDLMEEDNSIQIQRNELANLFSCAPSQINYVLTTRFTIDRGYYIESKKGGGGYVQIEKIRKSKDGHIRELLNEKIGNQISYKKAKELLEGLKESDLINERELKLILYAIDDKSLCMPIYELKEKVRSNILKNIIIGLFSIEE
>CP026615.2|AVD36598.1|4047522_4048017_-|DNA-methylase
MLCQKCNKNKASVYYNKIVNGEKTEMYLCSECAKENTEMNFNLDMPFSMMDIFSNLGFQPKKELEEKLVCPKCNTTYSEFKNNGRFGCSECYNAFSSQVNPMLQNIHGHIEHTGKAPKKSFYKISVENEIKELKEDLDRAIKNEEYELAAQFRDKIKYLKGSID
>CP026615.2|AVD36597.1|4046481_4047507_-|protein-arginine-kinase
MKENIVMKSRVRLARNLNNYSFPNKLDKECAMEIIEKVKNAFINSNLEQKEEFDFYKIEDLDQSKKMLMVEEHIISPDLAESDKSAVIVKKDKTVSIMINEEDHIRIQTMCDDLNLEYAYSVANEIDDLLESSLEYAFSTKLGYLTSCPTNTGTGMRASVMMHLPALSQLGYMDELYKISSQIGIAIRGIYGERTEALGNIYQISNQLTLGRTESNIIENVSGLTKDAISKEIKAREILQKKLGIKLEDKIFRSIGTLENSRIMSSAEAMSHLSNIKMGIEMNYIDKLDLRAIEQLMIGIQPAHQSIMYKSDDVENRDINRATYIRETLEKLRGGMNCELQ
>CP026615.2|AVD36596.1|4044047_4046495_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MNFNRFTQRAKKAIDLAFESAKGLGHNIVGSEHILLGLLREEEGIAAKVLSKVGFTEAYLEGKIVDMEGKGEEISEDIVLSPRSKQILELSGMFANKLKTNYIGTEHILLAIIQEGEGIANKILNYAGVNDRTLAQLTIDMMGISDKNQYKAENSYTGNQNQAESKVLDKYGRNLTLYAKQNKIDPVIGREKEIQRVIQILSRRTKNNPVLIGDPGVGKTAIAEGLATNIALGNVPETLKNKTLYSLEMGSLLAGAKYRGEFEERIKEVVDEVVKNGNIILFIDEMHTIIGAGSTGEGSIDASNILKPALARGEIQVIGATTIDEYRKHVEKDSALERRFQPVMVDEPTKEDSIKILEGLRDKYEAHHKVKITDDAIKAAVELSTRYISDRYLPDKAIDLIDEAASKVRLKENTPPSEIKKLELEIENIDKEKEEAVRCQDFEKAAKIRDEQGLLKKQLEDVRERWSKSSKHSDLVDGEVIAEVVGLWTGIPVNKILEEEADRLLRLEEILHNRVIGQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGKTELSKALAEVQFGDENQIIRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTIVIMTSNVGASTIGRQKTLGFSIAKGDEEEKSQYEKMKENIMGELKQRFRPEFLNRIDDIIVFHSLNENHISKIVLLMAAKLQERLKEMDIKLEMSDEAVKLISKSGFDLEYGARPLKRALQKELEDELSEAILKGNVKKGSNVVAKVKDEKIVFETK
>CP026615.2|AVD36595.1|4042494_4043868_-|DNA-repair-protein-RadA
MAKIKTKYVCQSCGYETAKWLGKCPECTKWNTFVEEIDQKSTKKEVFIIDKSSSKPVTINSIESKEEERFTTDINELDRVLGGGIVKGSLVLVGGDPGIGKSTLLIQVSSNVANLGKTVLYITGEESESQIKMRAKRLGINSENLYIFAENNLSIIESYLEVVNPELIILDSIQTVFSPEISSAPGTVSQIKEGTSKFMKISKKMGISTFIVGHVTKEGSLAGPKLLEHMVDTVLYFEGERYNTYRLVRAVKNRFGSTNELGVFEMRDLGLVELDNPSKILISEKPKDVAGSVIISTVEGTRPMLLELQALVSPTSFGIPKRTSTGVDYNRVGMLLAVLEKRVGLQIQNQDVYINIVGGIKINEPSIDLGIAISVASSFRNIPIDEDIAVTGEVGLTGEVRAVSFIEKRIAECKKLGFKKIVVPRSNYDVIKDTKGIEIWPVDNLRQAINIVLGRNQ
>CP026615.2|AVD36594.1|4041421_4042492_-|dna-integrity-scanning-protein-disa
MENFLDNKNMLYALKMISPGTPLRLGLNNVLRAKTGGLIVIATNEDVMKIVDGGFAINAEYSPSYLYELAKMDGAIVLSGDVKKILFANAQLIPDYFIETSETGTRHRTAERVAKQTGAIVIGISQRRNVITVYRGNEKYVVEDISKIFTKANQAIQTLEKYKTVLDQAITNLNALEFNDLVTIYDVALVMQKMEMVMRVTSIIEKYVIELGDEGTLVSMQLEELMGTTRIDQKLIFKDYNKENTEIKELMKKVKNLNSEELIELVNMAKLLGYSGFSESMDMPIKTRGYRILSKIHRLPTAIIENLVNYFENFQQILDASIEELDEVEGIGEIRATYIKNGLIKMKQLVLLDRHI
>CP026615.2|AVD36593.1|4040238_4041333_-|PIN/TRAM-domain-containing-protein
MIRKVTRILFILLGFTIGITTYLTLMKDFEILTFGKETYGYIAAVVAGIIIAILGYFIEPWVVNKVKEIAKIVDKELSKYPQTDILLGSMGLIVGFVIAYLLSGLVNRIPIVGGILSLLLYLFLGYLGMKVALKSKNDLFNIGKLGRLANPIKDKDKDKENKKDIKAIPPKVLDTSVIIDGRIADICKTGFIEGKLIIPAFVLEELRHIADSSDDLKRVRGRRGLDILNIIQKELNIEVEISERDFDDIAEVDSKLLKLAQVLNGKVVTNDYNLNKVAQFQGVEVLNINELANAIKPVAIPGEDMVVQVVKEGKEAQQGVAYLDDGTMIVVDGGRKYMNETIKVLVTSVLQTPAGRMIFAKPKN
>CP026615.2|AVD36603.1|4064669_4065875_+|glycosyl-transferase
MSKKVLIMSASTGGGHNRAALAIKEELTSKTLDGEPIECEIIDSLKLVNNTMDKIISRGYEKSAIYTPKAYGSVYRLSETNLLSKNEFKDNLLITFMAKKFKKLIRSEKPDLIIGTHPFPMIALSTLKKNFNLHNNESNAYTDHFYKHYTNTINVPPLISVLTDYTTHSTWIQNEIDYYIVGHEYVKELLVFDGVEPSKIRTFGIPVEKSFLSHRDKDTVLSELNLSPDKLTVLLMGGSFGAGNIKETLDELLDTDRDFQILVITGKNESLKEKIEKKLISRYHDKNVCVLGYTDKMNDILASIDVLVSKPGGLTTTEALLKDVPMIVPYYIPGQEEENLDFLSNCGAALRTTKKYNLSILLKVLIDDPSRLEMLKRNIKSIRKSNSAQNIANLILNIISG
>CP026615.2|AVD36604.1|4065945_4066167_-|hypothetical-protein
MKPIMNLEEHNAMKEKRVKKMKSKDKPKYDDFEDISFSNKKKTKKNVRNKNAEFRNNYKNYQYDYEEDFYEPI
>CP026615.2|AVD36605.1|4066308_4066908_-|recombination-protein-RecR
MQVYTGPITRLIEEFSKLPGVGRKTAQRLAFHIINMNTNDVEALSKAIIDAKREIRYCSICCNITDTDPCSMCSNKSRDSSVICVVEDPRDVAAMERTREFKGQYHVLNGVISPMDGIGPDMLKIKELIQRLGNQEVKEIIMATNPTIEGEATAMYIARLVKPMGIKVTRIAHGLPVGGDLEYADEVTISKALEGRREI
>CP026615.2|AVD36606.1|4066920_4067271_-|YbaB/EbfC-family-nucleoid-associated-protein
MAKKGFGGGMMPGGGNMNNLLKQAQKMQENMQKAQQELESKEVEASVGGGAVTVKVNGKKEVIDITIKPEVVDPDDIEMLQDLVLSAVNQALRNIDDIQASQMSKVTGGMNIPGLF
>CP026615.2|AVD36607.1|4067329_4068967_-|DNA-polymerase-III-subunit-gamma/tau
MHKALYRAYRPQKFEDVIGQDHIIKTLKNQIYSDNIGHAYLFCGTRGTGKTSTAKIFSRAVNCLNKINEEPCNECEICESVLKDNTMDVVEIDAASNNSVDDIRELRESVKYSPANAKYKVYIIDEVHMLSQGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRYDFKRVTVKDMTLRMKKICEDEGIDIDDKALNLIARNSQGALRDALSILDQCMSFGESKIDYKDVVELMGSVNIEQLFELSQCIVEQDTKKSLEILNEFVLWGKDIRNLINDLIDHFRNLMVCKVSSELDEIISLPEETIEQLKIQSKNIDINDLIRILNILSITQDDIKSSSNPRVLVEITIMKIAQPMFDESKEALIKRVENLEKMIELGNFKSEKIGNNKEKEYEVDREIDVKQENVVYEDVKNEDVILIESSWKNILKQIKKDKKMPIYALLSEVKSFNVYSNMLYVIFDDKFDFAKTRLSSQDTINYLEKTIRDVLNRSFNVKIVLTSEVKDINLEVKEKKDIGEEILKNIVSEEILEIKDSIDENESK
>CP026615.2|AVD36608.1|4069437_4069893_-|nucleoside-deaminase
MESSFYMKEALKEAYKAYNKKETPIGAIIVKDNQIIARAHNLTETLKDSTAHAEILAIKQASEKLGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKKLIIGTRHVKNSYIEKQHEFKLDYFNNNNVKVAFDVLQEECSIILQEFFKALRKRD
>CP026615.2|AVD36609.1|4070214_4071486_-|serine--tRNA-ligase
MLDIKRIRENLDDIKKAMERRGEKEFDLDAVVELDNKRREILQEVEVMKNELNVNSKNIPQLIKEGKDVTEEKARLKELSDKIKGIDEKVKEVEAKMEYALMRIPNVPHPEVPQGETDEDNVQIRTWGEPTKFDFEHKAHWDIGTGLGILDFERAGKITGSRFTLYRGLGARLERSLMNFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPKFEEDMFKIEGLEYFLIPTAEVPVTNIHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVKPEDSYNELESLTHDAETMLQMLGLPYRVVKICTGDLGFTAAFKYDLEVWMPSYNRYVEISSCSNFEDFQARRAGIRFKRDKKSKAEYVHTLNGSGLAIGRCLAAILENYQQADGSVVVPEELRPYMGVDVIR
>CP026615.2|AVD36610.1|4071944_4072826_-|mechanosensitive-ion-channel-family-protein
MNFLSLAKSASTNSNITKRTLENMLDNFSDNIPNIIYAIIVFVIGIYISKIVRRMVSKFLIKYGMSKGVNNFIVYGIYISMLSIISLISLGIIGIQTTSVVAVLGAAGFSIGLAFKEILSNLGSGMIILFFKPFNIGDYIQGSGVEGTVSDIQIFSTVLKTPDNKTIIIPNFQLTSNNIINYTHQNKRRIDFSYNISYDSDIDLVKSILNEIFINEKRILDDPRPIIGLNSIGNNTMQIVARPWVKTDDYWDVYFDVMEKVKNKFDENNIKVPFVPSSLLFNNMSNLNTMDKR
>CP026615.2|AVD36611.1|4072837_4073365_-|transcription-repressor-NadR
MERRCNMNSNERRSKLIDILKESKHPVKGGTLAELLNVSRQVIVQDIAIIRARGFEIIATPQGYIIYNQPYFTKQIKCKNHKDSKEIYDELKIIVDLGGIIKDVIVNHPTYGQITAELNIYSKMDIDNFMKKVETNEFKQLSVLTECSHIHTIEAIKEETIEAIVKELKDNGILS
>CP026615.2|AVD36612.1|4084081_4084855_-|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor
MKNVANATHYLNMDTKELFNLYNKNKNVDIRNILIERHLYLARLLAKKYINKGVDFEDIYQVASLALIYAIDRYDVEKGFEFSSFATPTIVGEIKKYFRDKVWTLRVPRRIQELSKKISDAKIKLEQENKKHPKVKDIADYIGVSEEDVLEAMEASYGYQPMSLDSSSNDDSEDKDITLIDKIGKEEGNFGSIEYEDFINKFIETLNELEVKIFKDRFFFDKTQSSIAKELGISQMTVSRLEKKVVEKLKKEYEKNL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP026615_10	10.6\|2849761\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849761-2849798	38	CP026615.2	4052380-4052417	0	1.0
CP026615_13	13.1\|4062522\|38\|CP026615\|CRISPRCasFinder	4062522-4062559	38	CP026615.2	145009-145046	1	0.974
CP026615_13	13.1\|4062522\|38\|CP026615\|CRISPRCasFinder	4062522-4062559	38	CP026615.2	275490-275527	1	0.974
CP026615_13	13.1\|4062522\|38\|CP026615\|CRISPRCasFinder	4062522-4062559	38	CP026615.2	1028609-1028646	1	0.974
CP026615_13	13.1\|4062522\|38\|CP026615\|CRISPRCasFinder	4062522-4062559	38	CP026615.2	3046147-3046184	1	0.974
CP026615_13	13.1\|4062522\|38\|CP026615\|CRISPRCasFinder	4062522-4062559	38	CP026615.2	4082294-4082331	1	0.974
CP026615_13	13.1\|4062522\|38\|CP026615\|CRISPRCasFinder	4062522-4062559	38	CP026615.2	3937192-3937229	2	0.947
CP026615_13	13.1\|4062522\|38\|CP026615\|CRISPRCasFinder	4062522-4062559	38	CP026615.2	3942606-3942643	2	0.947
CP026615_13	13.1\|4062522\|38\|CP026615\|CRISPRCasFinder	4062522-4062559	38	CP026615.2	3953167-3953204	2	0.947
CP026615_13	13.1\|4062522\|38\|CP026615\|CRISPRCasFinder	4062522-4062559	38	CP026615.2	3960051-3960088	2	0.947
CP026615_13	13.1\|4062522\|38\|CP026615\|CRISPRCasFinder	4062522-4062559	38	CP026615.2	4076754-4076791	2	0.947

1. spacer 10.6|2849761|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to position: 4052380-4052417, mismatch: 0, identity: 1.0

gagtgtatgctgaatatggtttaagaagtcctgacata	CRISPR spacer
gagtgtatgctgaatatggtttaagaagtcctgacata	Protospacer
**************************************

2. spacer 13.1|4062522|38|CP026615|CRISPRCasFinder matches to position: 145009-145046, mismatch: 1, identity: 0.974

aaacaaacttcagatgcgttcagtttattctgttgctt	CRISPR spacer
aaacaaacttcacatgcgttcagtttattctgttgctt	Protospacer
************ *************************

3. spacer 13.1|4062522|38|CP026615|CRISPRCasFinder matches to position: 275490-275527, mismatch: 1, identity: 0.974

aaacaaacttcagatgcgttcagtttattctgttgctt	CRISPR spacer
aaacaaacttcacatgcgttcagtttattctgttgctt	Protospacer
************ *************************

4. spacer 13.1|4062522|38|CP026615|CRISPRCasFinder matches to position: 1028609-1028646, mismatch: 1, identity: 0.974

aaacaaacttcagatgcgttcagtttattctgttgctt	CRISPR spacer
aaacaaacttcacatgcgttcagtttattctgttgctt	Protospacer
************ *************************

5. spacer 13.1|4062522|38|CP026615|CRISPRCasFinder matches to position: 3046147-3046184, mismatch: 1, identity: 0.974

aaacaaacttcagatgcgttcagtttattctgttgctt	CRISPR spacer
aaacaaacttcacatgcgttcagtttattctgttgctt	Protospacer
************ *************************

6. spacer 13.1|4062522|38|CP026615|CRISPRCasFinder matches to position: 4082294-4082331, mismatch: 1, identity: 0.974

aaacaaacttcagatgcgttcagtttattctgttgctt	CRISPR spacer
aaacaaacttcacatgcgttcagtttattctgttgctt	Protospacer
************ *************************

7. spacer 13.1|4062522|38|CP026615|CRISPRCasFinder matches to position: 3937192-3937229, mismatch: 2, identity: 0.947

aaacaaacttcagatgcgttcagtttattctgttgctt	CRISPR spacer
aaacaaacttcacatgtgttcagtttattctgttgctt	Protospacer
************ ***.*********************

8. spacer 13.1|4062522|38|CP026615|CRISPRCasFinder matches to position: 3942606-3942643, mismatch: 2, identity: 0.947

aaacaaacttcagatgcgttcagtttattctgttgctt	CRISPR spacer
aaacaaacttcacatgtgttcagtttattctgttgctt	Protospacer
************ ***.*********************

9. spacer 13.1|4062522|38|CP026615|CRISPRCasFinder matches to position: 3953167-3953204, mismatch: 2, identity: 0.947

aaacaaacttcagatgcgttcagtttattctgttgctt	CRISPR spacer
aaacaaacttcacatgtgttcagtttattctgttgctt	Protospacer
************ ***.*********************

10. spacer 13.1|4062522|38|CP026615|CRISPRCasFinder matches to position: 3960051-3960088, mismatch: 2, identity: 0.947

aaacaaacttcagatgcgttcagtttattctgttgctt	CRISPR spacer
aaacaaacttcacatgtgttcagtttattctgttgctt	Protospacer
************ ***.*********************

11. spacer 13.1|4062522|38|CP026615|CRISPRCasFinder matches to position: 4076754-4076791, mismatch: 2, identity: 0.947

aaacaaacttcagatgcgttcagtttattctgttgctt	CRISPR spacer
aaacaaacttcacatgtgttcagtttattctgttgctt	Protospacer
************ ***.*********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP026615_1	1.6\|780844\|34\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780844-780877	34	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	96290-96323	0	1.0
CP026615_1	1.6\|780844\|34\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780844-780877	34	MF547662	Clostridioides phage LIBA6276, complete genome	50143-50176	0	1.0
CP026615_1	1.6\|780844\|34\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780844-780877	34	MF547663	Clostridioides phage LIBA2945, complete genome	49993-50026	0	1.0
CP026615_1	1.7\|780907\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780907-780942	36	LN681541	Clostridium phage phiMMP01, complete genome	36335-36370	0	1.0
CP026615_1	1.11\|781171\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781171-781207	37	MK473382	Clostridium phage JD032, complete genome	493-529	0	1.0
CP026615_1	1.12\|781237\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781237-781272	36	NC_048665	Clostridium phage phiCDHM14, complete genome	9236-9271	0	1.0
CP026615_1	1.12\|781237\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781237-781272	36	MK473382	Clostridium phage JD032, complete genome	25441-25476	0	1.0
CP026615_1	1.12\|781237\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781237-781272	36	JX145342	Clostridium phage phiMMP04, complete genome	9222-9257	0	1.0
CP026615_1	1.12\|781237\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781237-781272	36	NC_028838	Clostridium phage phiCD506, complete genome	9662-9697	0	1.0
CP026615_1	1.12\|781237\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781237-781272	36	HG796225	Clostridium phage phiCDHM13 complete genome	9204-9239	0	1.0
CP026615_1	1.12\|781237\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781237-781272	36	LN681538	Clostridium phage phiCD481-1, complete genome	9689-9724	0	1.0
CP026615_1	1.12\|781237\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781237-781272	36	HG798901	Clostridium phage phiCDHM11 complete genome	9203-9238	0	1.0
CP026615_1	1.13\|781302\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781302-781337	36	NC_048665	Clostridium phage phiCDHM14, complete genome	12408-12443	0	1.0
CP026615_1	1.13\|781302\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781302-781337	36	HG796225	Clostridium phage phiCDHM13 complete genome	12376-12411	0	1.0
CP026615_1	1.13\|781302\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781302-781337	36	HG798901	Clostridium phage phiCDHM11 complete genome	12375-12410	0	1.0
CP026615_1	1.13\|781302\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781302-781337	36	MK473382	Clostridium phage JD032, complete genome	22269-22304	0	1.0
CP026615_1	1.14\|781367\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781367-781402	36	NC_048665	Clostridium phage phiCDHM14, complete genome	27689-27724	0	1.0
CP026615_1	1.14\|781367\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781367-781402	36	JX145342	Clostridium phage phiMMP04, complete genome	26659-26694	0	1.0
CP026615_1	1.14\|781367\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781367-781402	36	HG796225	Clostridium phage phiCDHM13 complete genome	27723-27758	0	1.0
CP026615_1	1.14\|781367\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781367-781402	36	LN681538	Clostridium phage phiCD481-1, complete genome	27458-27493	0	1.0
CP026615_1	1.14\|781367\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781367-781402	36	HG798901	Clostridium phage phiCDHM11 complete genome	27720-27755	0	1.0
CP026615_1	1.17\|781566\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781566-781602	37	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	96659-96695	0	1.0
CP026615_1	1.17\|781566\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781566-781602	37	MF547662	Clostridioides phage LIBA6276, complete genome	50512-50548	0	1.0
CP026615_1	1.17\|781566\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781566-781602	37	MF547663	Clostridioides phage LIBA2945, complete genome	50362-50398	0	1.0
CP026615_1	1.17\|781566\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781566-781602	37	JX145342	Clostridium phage phiMMP04, complete genome	16987-17023	0	1.0
CP026615_1	1.29\|782348\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782348-782383	36	NC_028905	Clostridium phage phiCD111, complete genome	34736-34771	0	1.0
CP026615_1	1.30\|782413\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782413-782449	37	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	61044-61080	0	1.0
CP026615_1	1.30\|782413\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782413-782449	37	MF547663	Clostridioides phage LIBA2945, complete genome	64508-64544	0	1.0
CP026615_1	1.30\|782413\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782413-782449	37	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	60920-60956	0	1.0
CP026615_1	1.30\|782413\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782413-782449	37	LN681537	Clostridium phage phiCD211, complete genome	69782-69818	0	1.0
CP026615_5	5.7\|1733513\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733513-1733548	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	106698-106733	0	1.0
CP026615_5	5.7\|1733513\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733513-1733548	36	MF547662	Clostridioides phage LIBA6276, complete genome	60551-60586	0	1.0
CP026615_5	5.7\|1733513\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733513-1733548	36	MF547663	Clostridioides phage LIBA2945, complete genome	60401-60436	0	1.0
CP026615_5	5.7\|1733513\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733513-1733548	36	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	52848-52883	0	1.0
CP026615_5	5.7\|1733513\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733513-1733548	36	LN681537	Clostridium phage phiCD211, complete genome	61710-61745	0	1.0
CP026615_5	5.7\|1733513\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733513-1733548	36	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	69117-69152	0	1.0
CP026615_5	5.11\|1733776\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733776-1733811	36	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	99213-99248	0	1.0
CP026615_5	5.11\|1733776\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733776-1733811	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	77943-77978	0	1.0
CP026615_5	5.11\|1733776\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733776-1733811	36	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	22752-22787	0	1.0
CP026615_5	5.11\|1733776\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733776-1733811	36	LN681537	Clostridium phage phiCD211, complete genome	31614-31649	0	1.0
CP026615_5	5.17\|1734169\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734169-1734204	36	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	101810-101845	0	1.0
CP026615_5	5.17\|1734169\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734169-1734204	36	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	20155-20190	0	1.0
CP026615_5	5.17\|1734169\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734169-1734204	36	LN681537	Clostridium phage phiCD211, complete genome	29017-29052	0	1.0
CP026615_5	5.18\|1734235\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734235-1734270	36	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	102792-102827	0	1.0
CP026615_5	5.18\|1734235\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734235-1734270	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	74441-74476	0	1.0
CP026615_5	5.18\|1734235\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734235-1734270	36	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	19173-19208	0	1.0
CP026615_5	5.18\|1734235\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734235-1734270	36	LN681537	Clostridium phage phiCD211, complete genome	28035-28070	0	1.0
CP026615_5	5.19\|1734301\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734301-1734336	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	74090-74125	0	1.0
CP026615_5	5.32\|1735160\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1735160-1735195	36	KU057941	Clostridium phage CDSH1, complete genome	21442-21477	0	1.0
CP026615_5	5.32\|1735160\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1735160-1735195	36	NC_028905	Clostridium phage phiCD111, complete genome	21182-21217	0	1.0
CP026615_5	5.32\|1735160\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1735160-1735195	36	HM568888	Clostridium phage phiCD38-2, complete genome	20938-20973	0	1.0
CP026615_5	5.32\|1735160\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1735160-1735195	36	NC_028958	Clostridium phage phiCD146, complete genome	20500-20535	0	1.0
CP026615_5	5.32\|1735160\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1735160-1735195	36	LN881738	Escherichia phage slur17, complete genome	40579-40614	0	1.0
CP026615_5	5.38\|1735554\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1735554-1735589	36	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	41065-41100	0	1.0
CP026615_5	5.38\|1735554\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1735554-1735589	36	NC_007917	Clostridium phage phi CD119, complete genome	41065-41100	0	1.0
CP026615_5	5.38\|1735554\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1735554-1735589	36	HG531805	Clostridium phage CDMH1 complete genome	43917-43952	0	1.0
CP026615_6	6.7\|1846274\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846274-1846309	36	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	1757-1792	0	1.0
CP026615_6	6.7\|1846274\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846274-1846309	36	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	420-455	0	1.0
CP026615_6	6.7\|1846274\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846274-1846309	36	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	42266-42301	0	1.0
CP026615_7	7.2\|1893711\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893711-1893745	35	HG531805	Clostridium phage CDMH1 complete genome	15144-15178	0	1.0
CP026615_7	7.6\|1893973\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893973-1894009	37	LN681539	Clostridium phage phiCD505, complete genome	46819-46855	0	1.0
CP026615_7	7.6\|1893973\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893973-1894009	37	LN681542	Clostridium phage phiMMP03, complete genome	48619-48655	0	1.0
CP026615_7	7.6\|1893973\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893973-1894009	37	NC_009231	Clostridium phage phiC2, complete genome	52157-52193	0	1.0
CP026615_7	7.6\|1893973\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893973-1894009	37	NC_011398	Clostridium phage phiCD27, complete genome	46118-46154	0	1.0
CP026615_7	7.6\|1893973\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893973-1894009	37	NC_048642	Clostridium phage CDKM9, complete genome	47263-47299	0	1.0
CP026615_7	7.10\|1894237\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894237-1894272	36	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	2395-2430	0	1.0
CP026615_7	7.10\|1894237\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894237-1894272	36	NC_007917	Clostridium phage phi CD119, complete genome	2395-2430	0	1.0
CP026615_7	7.10\|1894237\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894237-1894272	36	NC_028996	Clostridium phage phiCDHM19, complete genome	2642-2677	0	1.0
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	20608-20644	0	1.0
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	19253-19289	0	1.0
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	15930-15966	0	1.0
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	HG531805	Clostridium phage CDMH1 complete genome	25917-25953	0	1.0
CP026615_7	7.16\|1894634\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894634-1894670	37	NC_011398	Clostridium phage phiCD27, complete genome	48599-48635	0	1.0
CP026615_7	7.17\|1894700\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894700-1894736	37	LN681542	Clostridium phage phiMMP03, complete genome	20289-20325	0	1.0
CP026615_7	7.17\|1894700\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894700-1894736	37	NC_009231	Clostridium phage phiC2, complete genome	20242-20278	0	1.0
CP026615_7	7.17\|1894700\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894700-1894736	37	LN681541	Clostridium phage phiMMP01, complete genome	20288-20324	0	1.0
CP026615_7	7.20\|1894897\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894897-1894932	36	NC_008226	Clostridioides difficile 630 plasmid pCD630, complete sequence	6558-6593	0	1.0
CP026615_7	7.20\|1894897\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894897-1894932	36	NZ_CP016319	Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence	1579-1614	0	1.0
CP026615_7	7.24\|1895161\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895161-1895196	36	NC_048665	Clostridium phage phiCDHM14, complete genome	8812-8847	0	1.0
CP026615_7	7.24\|1895161\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895161-1895196	36	HG796225	Clostridium phage phiCDHM13 complete genome	8780-8815	0	1.0
CP026615_7	7.24\|1895161\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895161-1895196	36	HG798901	Clostridium phage phiCDHM11 complete genome	8779-8814	0	1.0
CP026615_7	7.24\|1895161\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895161-1895196	36	MK473382	Clostridium phage JD032, complete genome	25865-25900	0	1.0
CP026615_7	7.25\|1895226\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895226-1895262	37	MK473382	Clostridium phage JD032, complete genome	12222-12258	0	1.0
CP026615_7	7.27\|1895358\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895358-1895394	37	NC_028838	Clostridium phage phiCD506, complete genome	6223-6259	0	1.0
CP026615_7	7.27\|1895358\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895358-1895394	37	LN681538	Clostridium phage phiCD481-1, complete genome	6249-6285	0	1.0
CP026615_7	7.28\|1895424\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895424-1895461	38	NZ_CP029156	Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence	30916-30953	0	1.0
CP026615_7	7.28\|1895424\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895424-1895461	38	NZ_CP029153	Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence	24960-24997	0	1.0
CP026615_7	7.28\|1895424\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895424-1895461	38	MK473382	Clostridium phage JD032, complete genome	19287-19324	0	1.0
CP026615_7	7.28\|1895424\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895424-1895461	38	JX145342	Clostridium phage phiMMP04, complete genome	15368-15405	0	1.0
CP026615_7	7.29\|1895491\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895491-1895526	36	NC_028838	Clostridium phage phiCD506, complete genome	6082-6117	0	1.0
CP026615_7	7.40\|1896216\|37\|CP026615\|CRISPRCasFinder,CRT,PILER-CR	1896216-1896252	37	NC_048642	Clostridium phage CDKM9, complete genome	41013-41049	0	1.0
CP026615_7	7.44\|1896480\|37\|CP026615\|CRISPRCasFinder,CRT	1896480-1896516	37	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	66323-66359	0	1.0
CP026615_8	8.11\|2348499\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348499-2348534	36	GU949551	Clostridium phage phiCD6356, complete genome	2657-2692	0	1.0
CP026615_8	8.15\|2348761\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348761-2348797	37	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	34810-34846	0	1.0
CP026615_8	8.15\|2348761\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348761-2348797	37	NC_007917	Clostridium phage phi CD119, complete genome	34810-34846	0	1.0
CP026615_8	8.15\|2348761\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348761-2348797	37	LN681542	Clostridium phage phiMMP03, complete genome	35246-35282	0	1.0
CP026615_8	8.15\|2348761\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348761-2348797	37	NC_009231	Clostridium phage phiC2, complete genome	38783-38819	0	1.0
CP026615_8	8.15\|2348761\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348761-2348797	37	JX145341	Clostridium phage phiMMP02, complete genome	35766-35802	0	1.0
CP026615_8	8.15\|2348761\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348761-2348797	37	LN681541	Clostridium phage phiMMP01, complete genome	32536-32572	0	1.0
CP026615_8	8.15\|2348761\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348761-2348797	37	NC_011398	Clostridium phage phiCD27, complete genome	37556-37592	0	1.0
CP026615_8	8.15\|2348761\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348761-2348797	37	NC_048642	Clostridium phage CDKM9, complete genome	36730-36766	0	1.0
CP026615_10	10.7\|2849828\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849828-2849865	38	NC_008226	Clostridioides difficile 630 plasmid pCD630, complete sequence	6216-6253	0	1.0
CP026615_10	10.7\|2849828\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849828-2849865	38	NZ_CP016319	Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence	1237-1274	0	1.0
CP026615_10	10.8\|2849895\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849895-2849932	38	NZ_MG266000	Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence	7213-7250	0	1.0
CP026615_12	12.1\|3944617\|28\|CP026615\|CRISPRCasFinder	3944617-3944644	28	NZ_CP033215	Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence	5105-5132	0	1.0
CP026615_1	1.2\|780584\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780584-780618	35	NC_048642	Clostridium phage CDKM9, complete genome	41504-41538	1	0.971
CP026615_1	1.4\|780713\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780713-780748	36	LN681542	Clostridium phage phiMMP03, complete genome	20933-20968	1	0.972
CP026615_1	1.4\|780713\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780713-780748	36	HG531805	Clostridium phage CDMH1 complete genome	22030-22065	1	0.972
CP026615_1	1.4\|780713\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780713-780748	36	NC_009231	Clostridium phage phiC2, complete genome	20886-20921	1	0.972
CP026615_1	1.4\|780713\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780713-780748	36	LN681541	Clostridium phage phiMMP01, complete genome	20932-20967	1	0.972
CP026615_1	1.7\|780907\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780907-780942	36	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	37275-37310	1	0.972
CP026615_1	1.7\|780907\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780907-780942	36	NC_007917	Clostridium phage phi CD119, complete genome	37275-37310	1	0.972
CP026615_1	1.7\|780907\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780907-780942	36	LN681539	Clostridium phage phiCD505, complete genome	38774-38809	1	0.972
CP026615_1	1.7\|780907\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780907-780942	36	LN681542	Clostridium phage phiMMP03, complete genome	40017-40052	1	0.972
CP026615_1	1.7\|780907\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780907-780942	36	HG531805	Clostridium phage CDMH1 complete genome	40261-40296	1	0.972
CP026615_1	1.7\|780907\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780907-780942	36	NC_009231	Clostridium phage phiC2, complete genome	43554-43589	1	0.972
CP026615_1	1.7\|780907\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780907-780942	36	KX228400	Clostridium phage CDKM15, complete genome	40539-40574	1	0.972
CP026615_1	1.9\|781038\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781038-781075	38	NC_028996	Clostridium phage phiCDHM19, complete genome	41368-41405	1	0.974
CP026615_1	1.11\|781171\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781171-781207	37	NC_008226	Clostridioides difficile 630 plasmid pCD630, complete sequence	5600-5636	1	0.973
CP026615_1	1.11\|781171\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781171-781207	37	NZ_CP016319	Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence	621-657	1	0.973
CP026615_1	1.11\|781171\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781171-781207	37	NC_048665	Clostridium phage phiCDHM14, complete genome	31765-31801	1	0.973
CP026615_1	1.11\|781171\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781171-781207	37	NC_028838	Clostridium phage phiCD506, complete genome	32852-32888	1	0.973
CP026615_1	1.11\|781171\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781171-781207	37	HG796225	Clostridium phage phiCDHM13 complete genome	32715-32751	1	0.973
CP026615_1	1.11\|781171\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781171-781207	37	LN681538	Clostridium phage phiCD481-1, complete genome	32446-32482	1	0.973
CP026615_1	1.22\|781891\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781891-781926	36	JX145342	Clostridium phage phiMMP04, complete genome	9722-9757	1	0.972
CP026615_1	1.26\|782151\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782151-782187	37	NZ_CP029156	Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence	27115-27151	1	0.973
CP026615_1	1.26\|782151\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782151-782187	37	NZ_CP029153	Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence	21159-21195	1	0.973
CP026615_1	1.26\|782151\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782151-782187	37	NC_048665	Clostridium phage phiCDHM14, complete genome	18138-18174	1	0.973
CP026615_1	1.26\|782151\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782151-782187	37	HG796225	Clostridium phage phiCDHM13 complete genome	17638-17674	1	0.973
CP026615_1	1.26\|782151\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782151-782187	37	HG798901	Clostridium phage phiCDHM11 complete genome	17637-17673	1	0.973
CP026615_1	1.30\|782413\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782413-782449	37	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	114752-114788	1	0.973
CP026615_5	5.2\|1733183\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733183-1733218	36	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	52293-52328	1	0.972
CP026615_5	5.2\|1733183\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733183-1733218	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	123047-123082	1	0.972
CP026615_5	5.2\|1733183\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733183-1733218	36	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	69672-69707	1	0.972
CP026615_5	5.2\|1733183\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733183-1733218	36	LN681537	Clostridium phage phiCD211, complete genome	78534-78569	1	0.972
CP026615_5	5.8\|1733579\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733579-1733614	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	79416-79451	1	0.972
CP026615_5	5.16\|1734103\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734103-1734138	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	78642-78677	1	0.972
CP026615_5	5.16\|1734103\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734103-1734138	36	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	23451-23486	1	0.972
CP026615_5	5.16\|1734103\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734103-1734138	36	LN681537	Clostridium phage phiCD211, complete genome	32313-32348	1	0.972
CP026615_5	5.16\|1734103\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734103-1734138	36	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	98514-98549	1	0.972
CP026615_5	5.19\|1734301\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734301-1734336	36	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	103143-103178	1	0.972
CP026615_5	5.19\|1734301\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734301-1734336	36	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	18822-18857	1	0.972
CP026615_5	5.19\|1734301\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734301-1734336	36	LN681537	Clostridium phage phiCD211, complete genome	27684-27719	1	0.972
CP026615_5	5.21\|1734434\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734434-1734469	36	GU949551	Clostridium phage phiCD6356, complete genome	36074-36109	1	0.972
CP026615_5	5.23\|1734566\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734566-1734601	36	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	47983-48018	1	0.972
CP026615_5	5.23\|1734566\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734566-1734601	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	125389-125424	1	0.972
CP026615_5	5.23\|1734566\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734566-1734601	36	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	73982-74017	1	0.972
CP026615_5	5.23\|1734566\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734566-1734601	36	LN681537	Clostridium phage phiCD211, complete genome	82844-82879	1	0.972
CP026615_5	5.24\|1734632\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734632-1734667	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	111280-111315	1	0.972
CP026615_5	5.24\|1734632\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734632-1734667	36	MF547662	Clostridioides phage LIBA6276, complete genome	64625-64660	1	0.972
CP026615_5	5.24\|1734632\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734632-1734667	36	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	57448-57483	1	0.972
CP026615_5	5.24\|1734632\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734632-1734667	36	LN681537	Clostridium phage phiCD211, complete genome	66310-66345	1	0.972
CP026615_5	5.24\|1734632\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734632-1734667	36	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	64517-64552	1	0.972
CP026615_5	5.37\|1735488\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1735488-1735523	36	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	62659-62694	1	0.972
CP026615_5	5.38\|1735554\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1735554-1735589	36	LN681539	Clostridium phage phiCD505, complete genome	41179-41214	1	0.972
CP026615_6	6.5\|1846144\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846144-1846179	36	LN681539	Clostridium phage phiCD505, complete genome	49161-49196	1	0.972
CP026615_6	6.5\|1846144\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846144-1846179	36	HG531805	Clostridium phage CDMH1 complete genome	51883-51918	1	0.972
CP026615_6	6.5\|1846144\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846144-1846179	36	JX145341	Clostridium phage phiMMP02, complete genome	48240-48275	1	0.972
CP026615_6	6.5\|1846144\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846144-1846179	36	NC_011398	Clostridium phage phiCD27, complete genome	50766-50801	1	0.972
CP026615_6	6.5\|1846144\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846144-1846179	36	NC_048642	Clostridium phage CDKM9, complete genome	49605-49640	1	0.972
CP026615_6	6.7\|1846274\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846274-1846309	36	NZ_CP029156	Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence	45852-45887	1	0.972
CP026615_6	6.7\|1846274\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846274-1846309	36	NZ_CP029153	Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence	39896-39931	1	0.972
CP026615_7	7.2\|1893711\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893711-1893745	35	LN681542	Clostridium phage phiMMP03, complete genome	14004-14038	1	0.971
CP026615_7	7.2\|1893711\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893711-1893745	35	NC_009231	Clostridium phage phiC2, complete genome	14035-14069	1	0.971
CP026615_7	7.2\|1893711\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893711-1893745	35	LN681541	Clostridium phage phiMMP01, complete genome	14004-14038	1	0.971
CP026615_7	7.4\|1893841\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893841-1893876	36	LN681539	Clostridium phage phiCD505, complete genome	36578-36613	1	0.972
CP026615_7	7.4\|1893841\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893841-1893876	36	LN681542	Clostridium phage phiMMP03, complete genome	36640-36675	1	0.972
CP026615_7	7.4\|1893841\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893841-1893876	36	NC_009231	Clostridium phage phiC2, complete genome	40177-40212	1	0.972
CP026615_7	7.4\|1893841\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893841-1893876	36	NC_048642	Clostridium phage CDKM9, complete genome	38124-38159	1	0.972
CP026615_7	7.5\|1893906\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893906-1893943	38	LN681542	Clostridium phage phiMMP03, complete genome	15825-15862	1	0.974
CP026615_7	7.5\|1893906\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893906-1893943	38	NC_009231	Clostridium phage phiC2, complete genome	15856-15893	1	0.974
CP026615_7	7.5\|1893906\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893906-1893943	38	LN681541	Clostridium phage phiMMP01, complete genome	15825-15862	1	0.974
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	NC_048665	Clostridium phage phiCDHM14, complete genome	18934-18970	1	0.973
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	LN681539	Clostridium phage phiCD505, complete genome	28459-28495	1	0.973
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	JX145342	Clostridium phage phiMMP04, complete genome	18939-18975	1	0.973
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	LN681542	Clostridium phage phiMMP03, complete genome	27438-27474	1	0.973
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	NC_028838	Clostridium phage phiCD506, complete genome	19063-19099	1	0.973
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	HG796225	Clostridium phage phiCDHM13 complete genome	18434-18470	1	0.973
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	JX145341	Clostridium phage phiMMP02, complete genome	27690-27726	1	0.973
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	LN681541	Clostridium phage phiMMP01, complete genome	24681-24717	1	0.973
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	NC_011398	Clostridium phage phiCD27, complete genome	27974-28010	1	0.973
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	HG798901	Clostridium phage phiCDHM11 complete genome	18433-18469	1	0.973
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	KX228400	Clostridium phage CDKM15, complete genome	29839-29875	1	0.973
CP026615_7	7.22\|1895028\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895028-1895064	37	LN681539	Clostridium phage phiCD505, complete genome	25906-25942	1	0.973
CP026615_7	7.22\|1895028\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895028-1895064	37	LN681542	Clostridium phage phiMMP03, complete genome	24885-24921	1	0.973
CP026615_7	7.28\|1895424\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895424-1895461	38	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	16703-16740	1	0.974
CP026615_7	7.28\|1895424\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895424-1895461	38	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	15348-15385	1	0.974
CP026615_7	7.28\|1895424\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895424-1895461	38	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	12025-12062	1	0.974
CP026615_7	7.29\|1895491\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895491-1895526	36	LN681538	Clostridium phage phiCD481-1, complete genome	6108-6143	1	0.972
CP026615_7	7.32\|1895688\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895688-1895724	37	NC_009231	Clostridium phage phiC2, complete genome	17675-17711	1	0.973
CP026615_8	8.10\|2348433\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348433-2348469	37	MK473382	Clostridium phage JD032, complete genome	35043-35079	1	0.973
CP026615_10	10.7\|2849828\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849828-2849865	38	NZ_MG266000	Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence	6382-6419	1	0.974
CP026615_1	1.3\|780648\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780648-780683	36	LN681539	Clostridium phage phiCD505, complete genome	33801-33836	2	0.944
CP026615_1	1.3\|780648\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780648-780683	36	JX145341	Clostridium phage phiMMP02, complete genome	33030-33065	2	0.944
CP026615_1	1.6\|780844\|34\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780844-780877	34	LN681538	Clostridium phage phiCD481-1, complete genome	17348-17381	2	0.941
CP026615_1	1.7\|780907\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780907-780942	36	NC_028996	Clostridium phage phiCDHM19, complete genome	41037-41072	2	0.944
CP026615_1	1.7\|780907\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780907-780942	36	JX145341	Clostridium phage phiMMP02, complete genome	38199-38234	2	0.944
CP026615_1	1.8\|780972\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780972-781008	37	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	21499-21535	2	0.946
CP026615_1	1.8\|780972\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780972-781008	37	NC_048665	Clostridium phage phiCDHM14, complete genome	14654-14690	2	0.946
CP026615_1	1.8\|780972\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780972-781008	37	NC_007917	Clostridium phage phi CD119, complete genome	21499-21535	2	0.946
CP026615_1	1.8\|780972\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780972-781008	37	NC_028996	Clostridium phage phiCDHM19, complete genome	21752-21788	2	0.946
CP026615_1	1.8\|780972\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780972-781008	37	MK473382	Clostridium phage JD032, complete genome	20019-20055	2	0.946
CP026615_1	1.8\|780972\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780972-781008	37	HG796225	Clostridium phage phiCDHM13 complete genome	14622-14658	2	0.946
CP026615_1	1.8\|780972\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780972-781008	37	LN681538	Clostridium phage phiCD481-1, complete genome	15110-15146	2	0.946
CP026615_1	1.8\|780972\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780972-781008	37	HG798901	Clostridium phage phiCDHM11 complete genome	14621-14657	2	0.946
CP026615_1	1.25\|782086\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782086-782121	36	GU949551	Clostridium phage phiCD6356, complete genome	10970-11005	2	0.944
CP026615_1	1.27\|782217\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782217-782253	37	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	40544-40580	2	0.946
CP026615_1	1.27\|782217\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782217-782253	37	NC_007917	Clostridium phage phi CD119, complete genome	40544-40580	2	0.946
CP026615_1	1.27\|782217\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782217-782253	37	HG531805	Clostridium phage CDMH1 complete genome	43397-43433	2	0.946
CP026615_5	5.3\|1733249\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733249-1733284	36	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	33780-33815	2	0.944
CP026615_5	5.3\|1733249\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733249-1733284	36	LN681537	Clostridium phage phiCD211, complete genome	42642-42677	2	0.944
CP026615_5	5.3\|1733249\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733249-1733284	36	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	88185-88220	2	0.944
CP026615_5	5.8\|1733579\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733579-1733614	36	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	24225-24260	2	0.944
CP026615_5	5.8\|1733579\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733579-1733614	36	LN681537	Clostridium phage phiCD211, complete genome	33087-33122	2	0.944
CP026615_5	5.8\|1733579\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733579-1733614	36	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	97740-97775	2	0.944
CP026615_5	5.24\|1734632\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734632-1734667	36	MF547663	Clostridioides phage LIBA2945, complete genome	63090-63125	2	0.944
CP026615_6	6.8\|1846339\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846339-1846375	37	NC_048665	Clostridium phage phiCDHM14, complete genome	13309-13345	2	0.946
CP026615_6	6.8\|1846339\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846339-1846375	37	MK473382	Clostridium phage JD032, complete genome	21367-21403	2	0.946
CP026615_6	6.8\|1846339\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846339-1846375	37	HG796225	Clostridium phage phiCDHM13 complete genome	13277-13313	2	0.946
CP026615_6	6.8\|1846339\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846339-1846375	37	HG798901	Clostridium phage phiCDHM11 complete genome	13276-13312	2	0.946
CP026615_7	7.1\|1893644\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893644-1893681	38	NC_011398	Clostridium phage phiCD27, complete genome	49299-49336	2	0.947
CP026615_7	7.5\|1893906\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893906-1893943	38	HG531805	Clostridium phage CDMH1 complete genome	17018-17055	2	0.947
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	MN718463	Clostridium phage phiCDKH01, complete genome	4382-4418	2	0.946
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	NC_048642	Clostridium phage CDKM9, complete genome	26661-26697	2	0.946
CP026615_7	7.28\|1895424\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895424-1895461	38	NC_048665	Clostridium phage phiCDHM14, complete genome	15385-15422	2	0.947
CP026615_7	7.28\|1895424\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895424-1895461	38	HG796225	Clostridium phage phiCDHM13 complete genome	15353-15390	2	0.947
CP026615_7	7.28\|1895424\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895424-1895461	38	HG798901	Clostridium phage phiCDHM11 complete genome	15352-15389	2	0.947
CP026615_7	7.29\|1895491\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895491-1895526	36	MK473382	Clostridium phage JD032, complete genome	29020-29055	2	0.944
CP026615_7	7.29\|1895491\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895491-1895526	36	NC_048665	Clostridium phage phiCDHM14, complete genome	5624-5659	2	0.944
CP026615_7	7.29\|1895491\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895491-1895526	36	HG796225	Clostridium phage phiCDHM13 complete genome	5625-5660	2	0.944
CP026615_7	7.29\|1895491\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895491-1895526	36	HG798901	Clostridium phage phiCDHM11 complete genome	5624-5659	2	0.944
CP026615_7	7.37\|1896018\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1896018-1896053	36	KX905163	Clostridioides phage phiSemix9P1, complete genome	16013-16048	2	0.944
CP026615_8	8.9\|2348367\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348367-2348403	37	NC_048665	Clostridium phage phiCDHM14, complete genome	205-241	2	0.946
CP026615_8	8.9\|2348367\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348367-2348403	37	JX145342	Clostridium phage phiMMP04, complete genome	226-262	2	0.946
CP026615_8	8.9\|2348367\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348367-2348403	37	HG796225	Clostridium phage phiCDHM13 complete genome	205-241	2	0.946
CP026615_8	8.9\|2348367\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348367-2348403	37	HG798901	Clostridium phage phiCDHM11 complete genome	205-241	2	0.946
CP026615_8	8.10\|2348433\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348433-2348469	37	NC_048665	Clostridium phage phiCDHM14, complete genome	32247-32283	2	0.946
CP026615_8	8.10\|2348433\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348433-2348469	37	JX145342	Clostridium phage phiMMP04, complete genome	31297-31333	2	0.946
CP026615_8	8.10\|2348433\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348433-2348469	37	NC_028838	Clostridium phage phiCD506, complete genome	60-96	2	0.946
CP026615_8	8.10\|2348433\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348433-2348469	37	HG796225	Clostridium phage phiCDHM13 complete genome	33197-33233	2	0.946
CP026615_8	8.10\|2348433\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348433-2348469	37	LN681538	Clostridium phage phiCD481-1, complete genome	83-119	2	0.946
CP026615_8	8.10\|2348433\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348433-2348469	37	HG798901	Clostridium phage phiCDHM11 complete genome	31600-31636	2	0.946
CP026615_8	8.14\|2348696\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348696-2348731	36	JX145342	Clostridium phage phiMMP04, complete genome	27308-27343	2	0.944
CP026615_8	8.16\|2348827\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348827-2348863	37	LN681539	Clostridium phage phiCD505, complete genome	32018-32054	2	0.946
CP026615_10	10.5\|2849695\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849695-2849731	37	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	26227-26263	2	0.946
CP026615_10	10.5\|2849695\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849695-2849731	37	NZ_CP029156	Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence	20514-20550	2	0.946
CP026615_10	10.5\|2849695\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849695-2849731	37	NZ_CP029153	Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence	14558-14594	2	0.946
CP026615_10	10.5\|2849695\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849695-2849731	37	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	24872-24908	2	0.946
CP026615_10	10.5\|2849695\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849695-2849731	37	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	21549-21585	2	0.946
CP026615_10	10.8\|2849895\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849895-2849932	38	NC_008226	Clostridioides difficile 630 plasmid pCD630, complete sequence	7047-7084	2	0.947
CP026615_10	10.8\|2849895\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849895-2849932	38	NZ_CP016319	Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence	2068-2105	2	0.947
CP026615_13	13.1\|4062522\|38\|CP026615\|CRISPRCasFinder	4062522-4062559	38	NZ_CP033215	Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence	3094-3131	2	0.947
CP026615_1	1.8\|780972\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780972-781008	37	JX145342	Clostridium phage phiMMP04, complete genome	14637-14673	3	0.919
CP026615_1	1.8\|780972\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780972-781008	37	NC_028838	Clostridium phage phiCD506, complete genome	15083-15119	3	0.919
CP026615_1	1.19\|781697\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781697-781731	35	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	74943-74977	3	0.914
CP026615_1	1.19\|781697\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781697-781731	35	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	99230-99264	3	0.914
CP026615_1	1.19\|781697\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781697-781731	35	MF547662	Clostridioides phage LIBA6276, complete genome	53083-53117	3	0.914
CP026615_1	1.19\|781697\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781697-781731	35	MF547663	Clostridioides phage LIBA2945, complete genome	52933-52967	3	0.914
CP026615_1	1.19\|781697\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781697-781731	35	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	47023-47057	3	0.914
CP026615_1	1.19\|781697\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781697-781731	35	LN681537	Clostridium phage phiCD211, complete genome	55885-55919	3	0.914
CP026615_5	5.21\|1734434\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734434-1734469	36	NC_028838	Clostridium phage phiCD506, complete genome	31845-31880	3	0.917
CP026615_5	5.25\|1734698\|37\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734698-1734734	37	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	103288-103324	3	0.919
CP026615_5	5.25\|1734698\|37\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734698-1734734	37	MF547662	Clostridioides phage LIBA6276, complete genome	57141-57177	3	0.919
CP026615_5	5.25\|1734698\|37\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734698-1734734	37	MF547663	Clostridioides phage LIBA2945, complete genome	56991-57027	3	0.919
CP026615_6	6.3\|1846013\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846013-1846050	38	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	37529-37566	3	0.921
CP026615_6	6.3\|1846013\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846013-1846050	38	NC_007917	Clostridium phage phi CD119, complete genome	37529-37566	3	0.921
CP026615_6	6.3\|1846013\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846013-1846050	38	NC_028996	Clostridium phage phiCDHM19, complete genome	41291-41328	3	0.921
CP026615_6	6.3\|1846013\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846013-1846050	38	LN681542	Clostridium phage phiMMP03, complete genome	40271-40308	3	0.921
CP026615_6	6.3\|1846013\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846013-1846050	38	NC_009231	Clostridium phage phiC2, complete genome	43808-43845	3	0.921
CP026615_6	6.3\|1846013\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846013-1846050	38	JX145341	Clostridium phage phiMMP02, complete genome	38453-38490	3	0.921
CP026615_6	6.3\|1846013\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846013-1846050	38	NC_011398	Clostridium phage phiCD27, complete genome	39278-39315	3	0.921
CP026615_6	6.3\|1846013\|38\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1846013-1846050	38	KX228400	Clostridium phage CDKM15, complete genome	40793-40830	3	0.921
CP026615_7	7.19\|1894833\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894833-1894867	35	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	12603-12637	3	0.914
CP026615_7	7.19\|1894833\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894833-1894867	35	NC_007917	Clostridium phage phi CD119, complete genome	12603-12637	3	0.914
CP026615_7	7.19\|1894833\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894833-1894867	35	NC_028996	Clostridium phage phiCDHM19, complete genome	12848-12882	3	0.914
CP026615_10	10.2\|2849497\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849497-2849533	37	GU949551	Clostridium phage phiCD6356, complete genome	34408-34444	3	0.919
CP026615_10	10.4\|2849629\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849629-2849665	37	NC_005326	[Clostridium] difficile plasmid pCD6, complete sequence	6388-6424	3	0.919
CP026615_8	8.8\|2348301\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348301-2348337	37	NC_009231	Clostridium phage phiC2, complete genome	25925-25961	4	0.892
CP026615_8	8.9\|2348367\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348367-2348403	37	MK473382	Clostridium phage JD032, complete genome	34438-34474	4	0.892
CP026615_8	8.9\|2348367\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348367-2348403	37	NC_028838	Clostridium phage phiCD506, complete genome	665-701	4	0.892
CP026615_8	8.9\|2348367\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348367-2348403	37	LN681538	Clostridium phage phiCD481-1, complete genome	688-724	4	0.892
CP026615_11	11.5\|3229615\|30\|CP026615\|CRISPRCasFinder	3229615-3229644	30	NZ_CP012644	Rufibacter tibetensis strain 1351 plasmid 1, complete sequence	141401-141430	4	0.867
CP026615_1	1.15\|781432\|39\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781432-781470	39	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	20149-20187	5	0.872
CP026615_1	1.15\|781432\|39\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781432-781470	39	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	18794-18832	5	0.872
CP026615_1	1.15\|781432\|39\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	781432-781470	39	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	15471-15509	5	0.872
CP026615_7	7.3\|1893775\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1893775-1893811	37	HG531805	Clostridium phage CDMH1 complete genome	20853-20889	5	0.865
CP026615_7	7.24\|1895161\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895161-1895196	36	JX145342	Clostridium phage phiMMP04, complete genome	8798-8833	5	0.861
CP026615_8	8.1\|2347838\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2347838-2347873	36	MK473382	Clostridium phage JD032, complete genome	34535-34570	5	0.861
CP026615_1	1.8\|780972\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780972-781008	37	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	15975-16011	6	0.838
CP026615_1	1.8\|780972\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780972-781008	37	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	14620-14656	6	0.838
CP026615_1	1.8\|780972\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780972-781008	37	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	11297-11333	6	0.838
CP026615_1	1.24\|782021\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	782021-782056	36	MK473382	Clostridium phage JD032, complete genome	6548-6583	6	0.833
CP026615_7	7.14\|1894500\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894500-1894536	37	MK473382	Clostridium phage JD032, complete genome	15449-15485	6	0.838
CP026615_11	11.3\|3229483\|30\|CP026615\|CRISPRCasFinder	3229483-3229512	30	NZ_CP040675	Exiguobacterium mexicanum strain A-EM plasmid punnamed1, complete sequence	7748-7777	6	0.8
CP026615_12	12.1\|3944617\|28\|CP026615\|CRISPRCasFinder	3944617-3944644	28	KY971610	Pseudomonas phage PspYZU05, complete genome	134240-134267	6	0.786
CP026615_5	5.10\|1733711\|35\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733711-1733745	35	MN855865	Myoviridae sp. isolate 346, complete genome	2209-2243	7	0.8
CP026615_7	7.42\|1896348\|37\|CP026615\|CRISPRCasFinder,CRT,PILER-CR	1896348-1896384	37	NZ_CP013206	Paenibacillus sp. IHB B 3084 plasmid pHD03, complete sequence	39283-39319	7	0.811
CP026615_10	10.2\|2849497\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849497-2849533	37	NZ_CP043618	Sulfurimonas sp. GYSZ_1 plasmid unnamed, complete sequence	3662-3698	7	0.811
CP026615_10	10.2\|2849497\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849497-2849533	37	NZ_CP043618	Sulfurimonas sp. GYSZ_1 plasmid unnamed, complete sequence	32895-32931	7	0.811
CP026615_11	11.4\|3229549\|30\|CP026615\|CRISPRCasFinder	3229549-3229578	30	HM452126	Aeromonas phage phiAS5, complete genome	188022-188051	7	0.767
CP026615_11	11.7\|3229747\|30\|CP026615\|CRISPRCasFinder	3229747-3229776	30	NC_015426	Clostridium botulinum BKT015925 plasmid p2BKT015925, complete sequence	60200-60229	7	0.767
CP026615_11	11.8\|3229813\|30\|CP026615\|CRISPRCasFinder	3229813-3229842	30	NZ_CP015323	Bacillus filamentosus strain Hbe603 plasmid pBEH1, complete sequence	34052-34081	7	0.767
CP026615_11	11.8\|3229813\|30\|CP026615\|CRISPRCasFinder	3229813-3229842	30	NC_025171	Acinetobacter sp. M131 plasmid pM131-5, complete sequence	4697-4726	7	0.767
CP026615_5	5.10\|1733711\|35\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733711-1733745	35	NC_017736	Helicobacter cetorum MIT 99-5656 plasmid pHCD, complete sequence	8468-8502	8	0.771
CP026615_5	5.10\|1733711\|35\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733711-1733745	35	NC_017736	Helicobacter cetorum MIT 99-5656 plasmid pHCD, complete sequence	8705-8739	8	0.771
CP026615_5	5.27\|1734831\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734831-1734866	36	MH884511	Exiguobacterium phage vB_EalM-132, complete genome	57668-57703	8	0.778
CP026615_5	5.37\|1735488\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1735488-1735523	36	NZ_CP007513	Bacillus bombysepticus plasmid pBb, complete genome	32365-32400	8	0.778
CP026615_5	5.37\|1735488\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1735488-1735523	36	CP046512	Bacillus cereus strain JHU plasmid p1, complete sequence	393669-393704	8	0.778
CP026615_7	7.24\|1895161\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895161-1895196	36	NC_013944	Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK1, complete sequence	26064-26099	8	0.778
CP026615_7	7.24\|1895161\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1895161-1895196	36	NC_013945	Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK3, complete sequence	26064-26099	8	0.778
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	AP013453	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S28-C28	9566-9597	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP025426	Enterococcus faecium strain SC4 plasmid p1, complete sequence	150973-151004	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	LT603679	Enterococcus faecium isolate Ef_DMG1500501 genome assembly, plasmid: 2	68291-68322	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP040369	Enterococcus faecium strain VB3240 plasmid unnamed1, complete sequence	111143-111174	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP043485	Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence	100671-100702	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP020485	Enterococcus faecium strain CFSAN059070 plasmid unnamed1, complete sequence	23887-23918	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP013995	Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence	118355-118386	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP027518	Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence	144805-144836	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP027498	Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence	66860-66891	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP027507	Enterococcus faecium strain AUSMDU00004055 plasmid unnamed1, complete sequence	44298-44329	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	140254-140285	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_LR135236	Enterococcus faecium isolate E7067 plasmid 2	73999-74030	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP019209	Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence	175685-175716	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_LR135429	Enterococcus faecium isolate E8927 plasmid 2	97410-97441	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_LR135476	Enterococcus faecium isolate E8423 plasmid 2	145680-145711	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_LR135220	Enterococcus faecium isolate E7040 plasmid 2	74349-74380	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_LR135358	Enterococcus faecium isolate E7948 plasmid 2	162261-162292	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_LR135352	Enterococcus faecium isolate E8014 plasmid 2	144808-144839	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_LR134106	Enterococcus faecium isolate E6043 plasmid 2	74349-74380	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	10348-10379	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP011829	Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence	206389-206420	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP045013	Enterococcus faecium strain LAC7.2 plasmid pI, complete sequence	93865-93896	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	105050-105081	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP025687	Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence	179991-180022	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP040741	Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence	142337-142368	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP040877	Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence	119042-119073	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP032307	Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence	170141-170172	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	7078-7109	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP019993	Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence	191990-192021	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP035655	Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence	84548-84579	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP035137	Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence	50736-50767	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP035661	Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence	78181-78212	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP035667	Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence	78183-78214	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP035649	Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence	84553-84584	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP035221	Enterococcus faecium strain SRCM103470 plasmid unnamed1	203456-203487	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	LR135186	Enterococcus faecium isolate E4413 genome assembly, plasmid: 2	85929-85960	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_CP042833	Enterococcus faecium strain FA3 plasmid unnamed1	135451-135482	8	0.75
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_MG674581	Enterococcus faecium strain HL1 plasmid pHLSA, complete sequence	69501-69532	8	0.75
CP026615_10	10.2\|2849497\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849497-2849533	37	NC_041928	Staphylococcus phage phiIBB-SEP1, complete genome	37105-37141	8	0.784
CP026615_10	10.2\|2849497\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849497-2849533	37	KP027447	Staphylococcus phage phiIPLA-C1C, complete genome	35955-35991	8	0.784
CP026615_10	10.2\|2849497\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849497-2849533	37	MH321490	Staphylococcus phage Quidividi, complete genome	71906-71942	8	0.784
CP026615_10	10.2\|2849497\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2849497-2849533	37	MF417868	Uncultured Caudovirales phage clone 7AX_1, partial genome	110184-110220	8	0.784
CP026615_11	11.7\|3229747\|30\|CP026615\|CRISPRCasFinder	3229747-3229776	30	NC_014663	Acinetobacter phage Acj9, complete genome	46685-46714	8	0.733
CP026615_5	5.15\|1734039\|34\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734039-1734072	34	NC_015851	Acidithiobacillus caldus SM-1 megaplasmid, complete sequence	236190-236223	9	0.735
CP026615_5	5.15\|1734039\|34\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734039-1734072	34	NZ_CP005987	Acidithiobacillus caldus ATCC 51756 plasmid megap mpAca1.1, complete sequence	119031-119064	9	0.735
CP026615_5	5.15\|1734039\|34\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734039-1734072	34	NZ_CP026329	Acidithiobacillus caldus strain MTH-04 plasmid p1, complete sequence	174745-174778	9	0.735
CP026615_5	5.35\|1735357\|35\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1735357-1735391	35	MT774406	CrAssphage cr124_1, complete genome	86796-86830	9	0.743
CP026615_7	7.38\|1896083\|38\|CP026615\|CRISPRCasFinder,CRT	1896083-1896120	38	MG065657	UNVERIFIED: Campylobacter phage C4, complete genome	13370-13407	9	0.763
CP026615_7	7.38\|1896083\|38\|CP026615\|CRISPRCasFinder,CRT	1896083-1896120	38	MG065649	UNVERIFIED: Campylobacter phage A143, complete genome	21552-21589	9	0.763
CP026615_7	7.38\|1896083\|38\|CP026615\|CRISPRCasFinder,CRT	1896083-1896120	38	KC710998	Shigella phage pSf-1, complete genome	51055-51092	9	0.763
CP026615_7	7.38\|1896083\|38\|CP026615\|CRISPRCasFinder,CRT	1896083-1896120	38	NC_049821	Salmonella phage slyngel, complete genome	28580-28617	9	0.763
CP026615_7	7.38\|1896083\|38\|CP026615\|CRISPRCasFinder,CRT	1896083-1896120	38	MK373798	Escherichia phage vB_EcoS_G29-2, complete genome	34911-34948	9	0.763
CP026615_7	7.38\|1896083\|38\|CP026615\|CRISPRCasFinder,CRT	1896083-1896120	38	MG065681	UNVERIFIED: Campylobacter phage A139, complete genome	45515-45552	9	0.763
CP026615_7	7.38\|1896083\|38\|CP026615\|CRISPRCasFinder,CRT	1896083-1896120	38	MG065680	UNVERIFIED: Campylobacter phage A113, complete genome	22100-22137	9	0.763
CP026615_7	7.38\|1896083\|38\|CP026615\|CRISPRCasFinder,CRT	1896083-1896120	38	MG065643	UNVERIFIED: Campylobacter phage E6, complete genome	36773-36810	9	0.763
CP026615_8	8.12\|2348564\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348564-2348600	37	NZ_LR215006	Mycoplasma conjunctivae strain NCTC10147 plasmid 10	11741-11777	9	0.757
CP026615_8	8.12\|2348564\|37\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348564-2348600	37	LR214957	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 3	10204-10240	9	0.757
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	379558-379589	9	0.719
CP026615_9	9.1\|2513690\|32\|CP026615\|CRISPRCasFinder	2513690-2513721	32	NC_019763	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.01, complete sequence	147487-147518	9	0.719
CP026615_1	1.2\|780584\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	780584-780618	35	MN033866	Leviviridae sp. isolate H1_Bulk_Litter_6_scaffold_308 hypothetical protein (H1BulkLitter6308_000001), hypothetical protein (H1BulkLitter6308_000002), RNA-dependent RNA polymerase (H1BulkLitter6308_000003), and hypothetical protein (H1BulkLitter6308_000004) genes, complete cds	3011-3045	10	0.714
CP026615_5	5.10\|1733711\|35\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1733711-1733745	35	NZ_CP034172	Chryseobacterium taklimakanense strain H4753 plasmid unnamed, complete sequence	21901-21935	10	0.714
CP026615_5	5.22\|1734500\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734500-1734535	36	NZ_CP050647	Escherichia coli strain PapM-36-2 plasmid pIncFIB, complete sequence	2680-2715	10	0.722
CP026615_5	5.22\|1734500\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734500-1734535	36	NC_019348	Lactococcus lactis subsp. cremoris plasmid pAF07, complete sequence	2990-3025	10	0.722
CP026615_5	5.22\|1734500\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734500-1734535	36	MN693542	Marine virus AFVG_25M165, complete genome	18964-18999	10	0.722
CP026615_7	7.19\|1894833\|35\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	1894833-1894867	35	NZ_CP003988	Streptomyces sp. 769 plasmid pSGZL, complete sequence	80296-80330	10	0.714
CP026615_5	5.22\|1734500\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734500-1734535	36	MN693056	Marine virus AFVG_25M10, complete genome	18618-18653	11	0.694
CP026615_5	5.22\|1734500\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734500-1734535	36	MN693152	Marine virus AFVG_25M11, complete genome	41143-41178	11	0.694
CP026615_5	5.22\|1734500\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734500-1734535	36	MN693342	Marine virus AFVG_25M9, complete genome	18790-18825	11	0.694
CP026615_5	5.22\|1734500\|36\|CP026615\|CRT,PILER-CR,CRISPRCasFinder	1734500-1734535	36	MN693020	Marine virus AFVG_117M64, complete genome	41144-41179	11	0.694
CP026615_8	8.17\|2348893\|36\|CP026615\|PILER-CR,CRISPRCasFinder,CRT	2348893-2348928	36	NC_014389	Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence	203717-203752	11	0.694
CP026615_7	7.43\|1896414\|37\|CP026615\|CRISPRCasFinder,CRT,PILER-CR	1896414-1896450	37	HG796590	Uncultured bacterium plasmid pRGI01759	395-431	12	0.676

1. spacer 1.6|780844|34|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgcttatacttacaactttttctgctgtagcat	CRISPR spacer
ttgcttatacttacaactttttctgctgtagcat	Protospacer
**********************************

2. spacer 1.6|780844|34|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

ttgcttatacttacaactttttctgctgtagcat	CRISPR spacer
ttgcttatacttacaactttttctgctgtagcat	Protospacer
**********************************

3. spacer 1.6|780844|34|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

ttgcttatacttacaactttttctgctgtagcat	CRISPR spacer
ttgcttatacttacaactttttctgctgtagcat	Protospacer
**********************************

4. spacer 1.7|780907|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 0, identity: 1.0

aaaactgtttctacttttttagtcccaagtaattcc	CRISPR spacer
aaaactgtttctacttttttagtcccaagtaattcc	Protospacer
************************************

5. spacer 1.11|781171|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

tttgatgaaaaagaagaatataagagggatgtggcaa	CRISPR spacer
tttgatgaaaaagaagaatataagagggatgtggcaa	Protospacer
*************************************

6. spacer 1.12|781237|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 0, identity: 1.0

taactccaaactccgtaagtcttgccatttctccaa	CRISPR spacer
taactccaaactccgtaagtcttgccatttctccaa	Protospacer
************************************

7. spacer 1.12|781237|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

taactccaaactccgtaagtcttgccatttctccaa	CRISPR spacer
taactccaaactccgtaagtcttgccatttctccaa	Protospacer
************************************

8. spacer 1.12|781237|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 0, identity: 1.0

taactccaaactccgtaagtcttgccatttctccaa	CRISPR spacer
taactccaaactccgtaagtcttgccatttctccaa	Protospacer
************************************

9. spacer 1.12|781237|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

taactccaaactccgtaagtcttgccatttctccaa	CRISPR spacer
taactccaaactccgtaagtcttgccatttctccaa	Protospacer
************************************

10. spacer 1.12|781237|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 0, identity: 1.0

taactccaaactccgtaagtcttgccatttctccaa	CRISPR spacer
taactccaaactccgtaagtcttgccatttctccaa	Protospacer
************************************

11. spacer 1.12|781237|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 0, identity: 1.0

taactccaaactccgtaagtcttgccatttctccaa	CRISPR spacer
taactccaaactccgtaagtcttgccatttctccaa	Protospacer
************************************

12. spacer 1.12|781237|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 0, identity: 1.0

taactccaaactccgtaagtcttgccatttctccaa	CRISPR spacer
taactccaaactccgtaagtcttgccatttctccaa	Protospacer
************************************

13. spacer 1.13|781302|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 0, identity: 1.0

gagtatcaagagaccagggaaaggcaggtaaagcag	CRISPR spacer
gagtatcaagagaccagggaaaggcaggtaaagcag	Protospacer
************************************

14. spacer 1.13|781302|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 0, identity: 1.0

gagtatcaagagaccagggaaaggcaggtaaagcag	CRISPR spacer
gagtatcaagagaccagggaaaggcaggtaaagcag	Protospacer
************************************

15. spacer 1.13|781302|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 0, identity: 1.0

gagtatcaagagaccagggaaaggcaggtaaagcag	CRISPR spacer
gagtatcaagagaccagggaaaggcaggtaaagcag	Protospacer
************************************

16. spacer 1.13|781302|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

gagtatcaagagaccagggaaaggcaggtaaagcag	CRISPR spacer
gagtatcaagagaccagggaaaggcaggtaaagcag	Protospacer
************************************

17. spacer 1.14|781367|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 0, identity: 1.0

aatggtaaaatgaaggcataataaatttcaatatag	CRISPR spacer
aatggtaaaatgaaggcataataaatttcaatatag	Protospacer
************************************

18. spacer 1.14|781367|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 0, identity: 1.0

aatggtaaaatgaaggcataataaatttcaatatag	CRISPR spacer
aatggtaaaatgaaggcataataaatttcaatatag	Protospacer
************************************

19. spacer 1.14|781367|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 0, identity: 1.0

aatggtaaaatgaaggcataataaatttcaatatag	CRISPR spacer
aatggtaaaatgaaggcataataaatttcaatatag	Protospacer
************************************

20. spacer 1.14|781367|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 0, identity: 1.0

aatggtaaaatgaaggcataataaatttcaatatag	CRISPR spacer
aatggtaaaatgaaggcataataaatttcaatatag	Protospacer
************************************

21. spacer 1.14|781367|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 0, identity: 1.0

aatggtaaaatgaaggcataataaatttcaatatag	CRISPR spacer
aatggtaaaatgaaggcataataaatttcaatatag	Protospacer
************************************

22. spacer 1.17|781566|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttggtagacaacctggtacttggcttaagattgataa	CRISPR spacer
ttggtagacaacctggtacttggcttaagattgataa	Protospacer
*************************************

23. spacer 1.17|781566|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

ttggtagacaacctggtacttggcttaagattgataa	CRISPR spacer
ttggtagacaacctggtacttggcttaagattgataa	Protospacer
*************************************

24. spacer 1.17|781566|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

ttggtagacaacctggtacttggcttaagattgataa	CRISPR spacer
ttggtagacaacctggtacttggcttaagattgataa	Protospacer
*************************************

25. spacer 1.17|781566|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 0, identity: 1.0

ttggtagacaacctggtacttggcttaagattgataa	CRISPR spacer
ttggtagacaacctggtacttggcttaagattgataa	Protospacer
*************************************

26. spacer 1.29|782348|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

taaatatagaataaagcattttagtttacaatgcaa	CRISPR spacer
taaatatagaataaagcattttagtttacaatgcaa	Protospacer
************************************

27. spacer 1.30|782413|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

acctaaaaaatcaatgcagcttatcttatatgcaatg	CRISPR spacer
acctaaaaaatcaatgcagcttatcttatatgcaatg	Protospacer
*************************************

28. spacer 1.30|782413|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

acctaaaaaatcaatgcagcttatcttatatgcaatg	CRISPR spacer
acctaaaaaatcaatgcagcttatcttatatgcaatg	Protospacer
*************************************

29. spacer 1.30|782413|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

acctaaaaaatcaatgcagcttatcttatatgcaatg	CRISPR spacer
acctaaaaaatcaatgcagcttatcttatatgcaatg	Protospacer
*************************************

30. spacer 1.30|782413|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

acctaaaaaatcaatgcagcttatcttatatgcaatg	CRISPR spacer
acctaaaaaatcaatgcagcttatcttatatgcaatg	Protospacer
*************************************

31. spacer 5.7|1733513|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tattaatccttctattggaaaatatcgtcttcaaga	CRISPR spacer
tattaatccttctattggaaaatatcgtcttcaaga	Protospacer
************************************

32. spacer 5.7|1733513|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

tattaatccttctattggaaaatatcgtcttcaaga	CRISPR spacer
tattaatccttctattggaaaatatcgtcttcaaga	Protospacer
************************************

33. spacer 5.7|1733513|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

tattaatccttctattggaaaatatcgtcttcaaga	CRISPR spacer
tattaatccttctattggaaaatatcgtcttcaaga	Protospacer
************************************

34. spacer 5.7|1733513|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

tattaatccttctattggaaaatatcgtcttcaaga	CRISPR spacer
tattaatccttctattggaaaatatcgtcttcaaga	Protospacer
************************************

35. spacer 5.7|1733513|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

tattaatccttctattggaaaatatcgtcttcaaga	CRISPR spacer
tattaatccttctattggaaaatatcgtcttcaaga	Protospacer
************************************

36. spacer 5.7|1733513|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tattaatccttctattggaaaatatcgtcttcaaga	CRISPR spacer
tattaatccttctattggaaaatatcgtcttcaaga	Protospacer
************************************

37. spacer 5.11|1733776|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttttgaagtttagttatatctgggtcaccagtctgt	CRISPR spacer
ttttgaagtttagttatatctgggtcaccagtctgt	Protospacer
************************************

38. spacer 5.11|1733776|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttttgaagtttagttatatctgggtcaccagtctgt	CRISPR spacer
ttttgaagtttagttatatctgggtcaccagtctgt	Protospacer
************************************

39. spacer 5.11|1733776|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

ttttgaagtttagttatatctgggtcaccagtctgt	CRISPR spacer
ttttgaagtttagttatatctgggtcaccagtctgt	Protospacer
************************************

40. spacer 5.11|1733776|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

ttttgaagtttagttatatctgggtcaccagtctgt	CRISPR spacer
ttttgaagtttagttatatctgggtcaccagtctgt	Protospacer
************************************

41. spacer 5.17|1734169|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ggattatccaatctttaatcttattaccataccatt	CRISPR spacer
ggattatccaatctttaatcttattaccataccatt	Protospacer
************************************

42. spacer 5.17|1734169|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

ggattatccaatctttaatcttattaccataccatt	CRISPR spacer
ggattatccaatctttaatcttattaccataccatt	Protospacer
************************************

43. spacer 5.17|1734169|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

ggattatccaatctttaatcttattaccataccatt	CRISPR spacer
ggattatccaatctttaatcttattaccataccatt	Protospacer
************************************

44. spacer 5.18|1734235|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctcttaaagcactatctaattcaacaatagttg	CRISPR spacer
tatctcttaaagcactatctaattcaacaatagttg	Protospacer
************************************

45. spacer 5.18|1734235|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctcttaaagcactatctaattcaacaatagttg	CRISPR spacer
tatctcttaaagcactatctaattcaacaatagttg	Protospacer
************************************

46. spacer 5.18|1734235|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

tatctcttaaagcactatctaattcaacaatagttg	CRISPR spacer
tatctcttaaagcactatctaattcaacaatagttg	Protospacer
************************************

47. spacer 5.18|1734235|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

tatctcttaaagcactatctaattcaacaatagttg	CRISPR spacer
tatctcttaaagcactatctaattcaacaatagttg	Protospacer
************************************

48. spacer 5.19|1734301|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tattgaacttagcatctaatttagtatttttagtag	CRISPR spacer
tattgaacttagcatctaatttagtatttttagtag	Protospacer
************************************

49. spacer 5.32|1735160|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

tcaaagatgcccctctagctggtttttgggtatcta	CRISPR spacer
tcaaagatgcccctctagctggtttttgggtatcta	Protospacer
************************************

50. spacer 5.32|1735160|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

tcaaagatgcccctctagctggtttttgggtatcta	CRISPR spacer
tcaaagatgcccctctagctggtttttgggtatcta	Protospacer
************************************

51. spacer 5.32|1735160|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

tcaaagatgcccctctagctggtttttgggtatcta	CRISPR spacer
tcaaagatgcccctctagctggtttttgggtatcta	Protospacer
************************************

52. spacer 5.32|1735160|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

tcaaagatgcccctctagctggtttttgggtatcta	CRISPR spacer
tcaaagatgcccctctagctggtttttgggtatcta	Protospacer
************************************

53. spacer 5.32|1735160|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

tcaaagatgcccctctagctggtttttgggtatcta	CRISPR spacer
tcaaagatgcccctctagctggtttttgggtatcta	Protospacer
************************************

54. spacer 5.38|1735554|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

gctaacttaattacttgttccacatttgctaatacc	CRISPR spacer
gctaacttaattacttgttccacatttgctaatacc	Protospacer
************************************

55. spacer 5.38|1735554|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

gctaacttaattacttgttccacatttgctaatacc	CRISPR spacer
gctaacttaattacttgttccacatttgctaatacc	Protospacer
************************************

56. spacer 5.38|1735554|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

gctaacttaattacttgttccacatttgctaatacc	CRISPR spacer
gctaacttaattacttgttccacatttgctaatacc	Protospacer
************************************

57. spacer 6.7|1846274|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttaatagcacatcttcgctttcaagtttctctatca	CRISPR spacer
ttaatagcacatcttcgctttcaagtttctctatca	Protospacer
************************************

58. spacer 6.7|1846274|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

ttaatagcacatcttcgctttcaagtttctctatca	CRISPR spacer
ttaatagcacatcttcgctttcaagtttctctatca	Protospacer
************************************

59. spacer 6.7|1846274|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ttaatagcacatcttcgctttcaagtttctctatca	CRISPR spacer
ttaatagcacatcttcgctttcaagtttctctatca	Protospacer
************************************

60. spacer 7.2|1893711|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

agggttgagttctggcgtattaagaggtgaggagc	CRISPR spacer
agggttgagttctggcgtattaagaggtgaggagc	Protospacer
***********************************

61. spacer 7.6|1893973|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 0, identity: 1.0

aaataaaagaattaggatttactcaacaatcaattaa	CRISPR spacer
aaataaaagaattaggatttactcaacaatcaattaa	Protospacer
*************************************

62. spacer 7.6|1893973|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

aaataaaagaattaggatttactcaacaatcaattaa	CRISPR spacer
aaataaaagaattaggatttactcaacaatcaattaa	Protospacer
*************************************

63. spacer 7.6|1893973|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

aaataaaagaattaggatttactcaacaatcaattaa	CRISPR spacer
aaataaaagaattaggatttactcaacaatcaattaa	Protospacer
*************************************

64. spacer 7.6|1893973|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 0, identity: 1.0

aaataaaagaattaggatttactcaacaatcaattaa	CRISPR spacer
aaataaaagaattaggatttactcaacaatcaattaa	Protospacer
*************************************

65. spacer 7.6|1893973|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

aaataaaagaattaggatttactcaacaatcaattaa	CRISPR spacer
aaataaaagaattaggatttactcaacaatcaattaa	Protospacer
*************************************

66. spacer 7.10|1894237|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

aagaaagacaaacatgttcaaagtcatgttcaaaca	CRISPR spacer
aagaaagacaaacatgttcaaagtcatgttcaaaca	Protospacer
************************************

67. spacer 7.10|1894237|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

aagaaagacaaacatgttcaaagtcatgttcaaaca	CRISPR spacer
aagaaagacaaacatgttcaaagtcatgttcaaaca	Protospacer
************************************

68. spacer 7.10|1894237|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

aagaaagacaaacatgttcaaagtcatgttcaaaca	CRISPR spacer
aagaaagacaaacatgttcaaagtcatgttcaaaca	Protospacer
************************************

69. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattataaccccaaccaactacagttgcagggattt	Protospacer
*************************************

70. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattataaccccaaccaactacagttgcagggattt	Protospacer
*************************************

71. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattataaccccaaccaactacagttgcagggattt	Protospacer
*************************************

72. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattataaccccaaccaactacagttgcagggattt	Protospacer
*************************************

73. spacer 7.16|1894634|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 0, identity: 1.0

aactcttttgctattcgtttcactacattattatcat	CRISPR spacer
aactcttttgctattcgtttcactacattattatcat	Protospacer
*************************************

74. spacer 7.17|1894700|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

aaaagtaatgagagtttagaagatagaaggtttagga	CRISPR spacer
aaaagtaatgagagtttagaagatagaaggtttagga	Protospacer
*************************************

75. spacer 7.17|1894700|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

aaaagtaatgagagtttagaagatagaaggtttagga	CRISPR spacer
aaaagtaatgagagtttagaagatagaaggtttagga	Protospacer
*************************************

76. spacer 7.17|1894700|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 0, identity: 1.0

aaaagtaatgagagtttagaagatagaaggtttagga	CRISPR spacer
aaaagtaatgagagtttagaagatagaaggtttagga	Protospacer
*************************************

77. spacer 7.20|1894897|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_008226 (Clostridioides difficile 630 plasmid pCD630, complete sequence) position: , mismatch: 0, identity: 1.0

aaaaactaaaacagtctatggctatatgaaaatctc	CRISPR spacer
aaaaactaaaacagtctatggctatatgaaaatctc	Protospacer
************************************

78. spacer 7.20|1894897|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016319 (Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence) position: , mismatch: 0, identity: 1.0

aaaaactaaaacagtctatggctatatgaaaatctc	CRISPR spacer
aaaaactaaaacagtctatggctatatgaaaatctc	Protospacer
************************************

79. spacer 7.24|1895161|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 0, identity: 1.0

gtcgtaaaacttaaagatgaaacaaaaggaatgatt	CRISPR spacer
gtcgtaaaacttaaagatgaaacaaaaggaatgatt	Protospacer
************************************

80. spacer 7.24|1895161|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 0, identity: 1.0

gtcgtaaaacttaaagatgaaacaaaaggaatgatt	CRISPR spacer
gtcgtaaaacttaaagatgaaacaaaaggaatgatt	Protospacer
************************************

81. spacer 7.24|1895161|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 0, identity: 1.0

gtcgtaaaacttaaagatgaaacaaaaggaatgatt	CRISPR spacer
gtcgtaaaacttaaagatgaaacaaaaggaatgatt	Protospacer
************************************

82. spacer 7.24|1895161|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

gtcgtaaaacttaaagatgaaacaaaaggaatgatt	CRISPR spacer
gtcgtaaaacttaaagatgaaacaaaaggaatgatt	Protospacer
************************************

83. spacer 7.25|1895226|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

agattcgacggagaacttttatctaataaagaaaaac	CRISPR spacer
agattcgacggagaacttttatctaataaagaaaaac	Protospacer
*************************************

84. spacer 7.27|1895358|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

tggtttgttgcaacatatgtgttccttcaacatatcc	CRISPR spacer
tggtttgttgcaacatatgtgttccttcaacatatcc	Protospacer
*************************************

85. spacer 7.27|1895358|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 0, identity: 1.0

tggtttgttgcaacatatgtgttccttcaacatatcc	CRISPR spacer
tggtttgttgcaacatatgtgttccttcaacatatcc	Protospacer
*************************************

86. spacer 7.28|1895424|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gaatctggagcaggtttataagtttctggatagctaga	CRISPR spacer
gaatctggagcaggtttataagtttctggatagctaga	Protospacer
**************************************

87. spacer 7.28|1895424|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gaatctggagcaggtttataagtttctggatagctaga	CRISPR spacer
gaatctggagcaggtttataagtttctggatagctaga	Protospacer
**************************************

88. spacer 7.28|1895424|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

gaatctggagcaggtttataagtttctggatagctaga	CRISPR spacer
gaatctggagcaggtttataagtttctggatagctaga	Protospacer
**************************************

89. spacer 7.28|1895424|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 0, identity: 1.0

gaatctggagcaggtttataagtttctggatagctaga	CRISPR spacer
gaatctggagcaggtttataagtttctggatagctaga	Protospacer
**************************************

90. spacer 7.29|1895491|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

aaaaaatataaaagagctaagcacatgaaggataat	CRISPR spacer
aaaaaatataaaagagctaagcacatgaaggataat	Protospacer
************************************

91. spacer 7.40|1896216|37|CP026615|CRISPRCasFinder,CRT,PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

tcacaaaaacaaggaatacttaagttagcatcaatga	CRISPR spacer
tcacaaaaacaaggaatacttaagttagcatcaatga	Protospacer
*************************************

92. spacer 7.44|1896480|37|CP026615|CRISPRCasFinder,CRT matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 0, identity: 1.0

gttgtattacctctgtaattattttttccaaaattac	CRISPR spacer
gttgtattacctctgtaattattttttccaaaattac	Protospacer
*************************************

93. spacer 8.11|2348499|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

cgcccttttcgctattattttttttataacccttca	CRISPR spacer
cgcccttttcgctattattttttttataacccttca	Protospacer
************************************

94. spacer 8.15|2348761|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

caggacaaaatagattatttgactggttaagaaataa	CRISPR spacer
caggacaaaatagattatttgactggttaagaaataa	Protospacer
*************************************

95. spacer 8.15|2348761|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

caggacaaaatagattatttgactggttaagaaataa	CRISPR spacer
caggacaaaatagattatttgactggttaagaaataa	Protospacer
*************************************

96. spacer 8.15|2348761|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

caggacaaaatagattatttgactggttaagaaataa	CRISPR spacer
caggacaaaatagattatttgactggttaagaaataa	Protospacer
*************************************

97. spacer 8.15|2348761|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

caggacaaaatagattatttgactggttaagaaataa	CRISPR spacer
caggacaaaatagattatttgactggttaagaaataa	Protospacer
*************************************

98. spacer 8.15|2348761|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

caggacaaaatagattatttgactggttaagaaataa	CRISPR spacer
caggacaaaatagattatttgactggttaagaaataa	Protospacer
*************************************

99. spacer 8.15|2348761|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 0, identity: 1.0

caggacaaaatagattatttgactggttaagaaataa	CRISPR spacer
caggacaaaatagattatttgactggttaagaaataa	Protospacer
*************************************

100. spacer 8.15|2348761|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 0, identity: 1.0

caggacaaaatagattatttgactggttaagaaataa	CRISPR spacer
caggacaaaatagattatttgactggttaagaaataa	Protospacer
*************************************

101. spacer 8.15|2348761|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

caggacaaaatagattatttgactggttaagaaataa	CRISPR spacer
caggacaaaatagattatttgactggttaagaaataa	Protospacer
*************************************

102. spacer 10.7|2849828|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_008226 (Clostridioides difficile 630 plasmid pCD630, complete sequence) position: , mismatch: 0, identity: 1.0

gtcttttcaatctgttcaactaccttaggttcattcag	CRISPR spacer
gtcttttcaatctgttcaactaccttaggttcattcag	Protospacer
**************************************

103. spacer 10.7|2849828|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016319 (Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence) position: , mismatch: 0, identity: 1.0

gtcttttcaatctgttcaactaccttaggttcattcag	CRISPR spacer
gtcttttcaatctgttcaactaccttaggttcattcag	Protospacer
**************************************

104. spacer 10.8|2849895|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG266000 (Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence) position: , mismatch: 0, identity: 1.0

cttatacttccgttattaaacatcatatctgctattat	CRISPR spacer
cttatacttccgttattaaacatcatatctgctattat	Protospacer
**************************************

105. spacer 12.1|3944617|28|CP026615|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gttgattcatattgctttaacttattac	CRISPR spacer
gttgattcatattgctttaacttattac	Protospacer
****************************

106. spacer 1.2|780584|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 1, identity: 0.971

attctttatacagagaaacacgatactatttacag	CRISPR spacer
attctttatacagagaaacacgatactatttatag	Protospacer
********************************.**

107. spacer 1.4|780713|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.972

aattgcataatattagagagtttaataccatcaagt	CRISPR spacer
aattgtataatattagagagtttaataccatcaagt	Protospacer
*****.******************************

108. spacer 1.4|780713|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 1, identity: 0.972

aattgcataatattagagagtttaataccatcaagt	CRISPR spacer
aattgtataatattagagagtttaataccatcaagt	Protospacer
*****.******************************

109. spacer 1.4|780713|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.972

aattgcataatattagagagtttaataccatcaagt	CRISPR spacer
aattgtataatattagagagtttaataccatcaagt	Protospacer
*****.******************************

110. spacer 1.4|780713|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 1, identity: 0.972

aattgcataatattagagagtttaataccatcaagt	CRISPR spacer
aattgtataatattagagagtttaataccatcaagt	Protospacer
*****.******************************

111. spacer 1.7|780907|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 1, identity: 0.972

aaaactgtttctacttttttagtcccaagtaattcc	CRISPR spacer
aaaattgtttctacttttttagtcccaagtaattcc	Protospacer
****.*******************************

112. spacer 1.7|780907|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 1, identity: 0.972

aaaactgtttctacttttttagtcccaagtaattcc	CRISPR spacer
aaaattgtttctacttttttagtcccaagtaattcc	Protospacer
****.*******************************

113. spacer 1.7|780907|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.972

aaaactgtttctacttttttagtcccaagtaattcc	CRISPR spacer
aaaactgtttctacttttttagtaccaagtaattcc	Protospacer
*********************** ************

114. spacer 1.7|780907|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.972

aaaactgtttctacttttttagtcccaagtaattcc	CRISPR spacer
aaaactgtttctacttttttagtaccaagtaattcc	Protospacer
*********************** ************

115. spacer 1.7|780907|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 1, identity: 0.972

aaaactgtttctacttttttagtcccaagtaattcc	CRISPR spacer
aaaactgtttctacttttttagtaccaagtaattcc	Protospacer
*********************** ************

116. spacer 1.7|780907|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.972

aaaactgtttctacttttttagtcccaagtaattcc	CRISPR spacer
aaaactgtttctacttttttagtaccaagtaattcc	Protospacer
*********************** ************

117. spacer 1.7|780907|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 1, identity: 0.972

aaaactgtttctacttttttagtcccaagtaattcc	CRISPR spacer
aaaactgtttctacttttttagtaccaagtaattcc	Protospacer
*********************** ************

118. spacer 1.9|781038|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 1, identity: 0.974

tctaaaatatcctcacaactcctgtaattgtattttct	CRISPR spacer
tctaaaatatcctcacaactcctgtaattgtattttcc	Protospacer
*************************************.

119. spacer 1.11|781171|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_008226 (Clostridioides difficile 630 plasmid pCD630, complete sequence) position: , mismatch: 1, identity: 0.973

tttgatgaaaaagaagaatataagagggatgtggcaa	CRISPR spacer
tttgatgaaaaagaagagtataagagggatgtggcaa	Protospacer
*****************.*******************

120. spacer 1.11|781171|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016319 (Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence) position: , mismatch: 1, identity: 0.973

tttgatgaaaaagaagaatataagagggatgtggcaa	CRISPR spacer
tttgatgaaaaagaagagtataagagggatgtggcaa	Protospacer
*****************.*******************

121. spacer 1.11|781171|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.973

tttgatgaaaaagaagaatataagagggatgtggcaa	CRISPR spacer
tttgatgaaaaagaagagtataagagggatgtggcaa	Protospacer
*****************.*******************

122. spacer 1.11|781171|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 1, identity: 0.973

tttgatgaaaaagaagaatataagagggatgtggcaa	CRISPR spacer
tttgatgaaaaagaagagtataagagggatgtggcaa	Protospacer
*****************.*******************

123. spacer 1.11|781171|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.973

tttgatgaaaaagaagaatataagagggatgtggcaa	CRISPR spacer
tttgatgaaaaagaagagtataagagggatgtggcaa	Protospacer
*****************.*******************

124. spacer 1.11|781171|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 1, identity: 0.973

tttgatgaaaaagaagaatataagagggatgtggcaa	CRISPR spacer
tttgatgaaaaagaagagtataagagggatgtggcaa	Protospacer
*****************.*******************

125. spacer 1.22|781891|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 1, identity: 0.972

attgtaagctctttaatttctaaattagctccgatt	CRISPR spacer
attgtaagctctttgatttctaaattagctccgatt	Protospacer
**************.*********************

126. spacer 1.26|782151|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.973

ttatgttataggagcaggttgcaagaagtataagcaa	CRISPR spacer
ttatgttataggagcaggttgcaagaaatataagcaa	Protospacer
***************************.*********

127. spacer 1.26|782151|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.973

ttatgttataggagcaggttgcaagaagtataagcaa	CRISPR spacer
ttatgttataggagcaggttgcaagaaatataagcaa	Protospacer
***************************.*********

128. spacer 1.26|782151|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.973

ttatgttataggagcaggttgcaagaagtataagcaa	CRISPR spacer
ttatgttataggagcaggttgcaagaaatataagcaa	Protospacer
***************************.*********

129. spacer 1.26|782151|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.973

ttatgttataggagcaggttgcaagaagtataagcaa	CRISPR spacer
ttatgttataggagcaggttgcaagaaatataagcaa	Protospacer
***************************.*********

130. spacer 1.26|782151|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.973

ttatgttataggagcaggttgcaagaagtataagcaa	CRISPR spacer
ttatgttataggagcaggttgcaagaaatataagcaa	Protospacer
***************************.*********

131. spacer 1.30|782413|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.973

acctaaaaaatcaatgcagcttatcttatatgcaatg	CRISPR spacer
acctaaaaaatcaatgcaacttatcttatatgcaatg	Protospacer
******************.******************

132. spacer 5.2|1733183|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.972

atgtttaagtcagatggctcaccaaatcaaatgttt	CRISPR spacer
atgtttaagtcagatggttcaccaaatcaaatgttt	Protospacer
*****************.******************

133. spacer 5.2|1733183|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

atgtttaagtcagatggctcaccaaatcaaatgttt	CRISPR spacer
atgtttaagtcagatggttcaccaaatcaaatgttt	Protospacer
*****************.******************

134. spacer 5.2|1733183|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 1, identity: 0.972

atgtttaagtcagatggctcaccaaatcaaatgttt	CRISPR spacer
atgtttaagtcagatggttcaccaaatcaaatgttt	Protospacer
*****************.******************

135. spacer 5.2|1733183|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 1, identity: 0.972

atgtttaagtcagatggctcaccaaatcaaatgttt	CRISPR spacer
atgtttaagtcagatggttcaccaaatcaaatgttt	Protospacer
*****************.******************

136. spacer 5.8|1733579|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

tatagttttgtagctctttcaagttcatctgcattt	CRISPR spacer
tatagttttgtagctctctcaagttcatctgcattt	Protospacer
*****************.******************

137. spacer 5.16|1734103|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

tctttagctttttctatttcagcaattatctctact	CRISPR spacer
tctttagctttttctatttcagcaattatttctact	Protospacer
*****************************.******

138. spacer 5.16|1734103|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 1, identity: 0.972

tctttagctttttctatttcagcaattatctctact	CRISPR spacer
tctttagctttttctatttcagcaattatttctact	Protospacer
*****************************.******

139. spacer 5.16|1734103|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 1, identity: 0.972

tctttagctttttctatttcagcaattatctctact	CRISPR spacer
tctttagctttttctatttcagcaattatttctact	Protospacer
*****************************.******

140. spacer 5.16|1734103|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.972

tctttagctttttctatttcagcaattatctctact	CRISPR spacer
tctttagctttttctatttcagcaattatttctact	Protospacer
*****************************.******

141. spacer 5.19|1734301|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.972

tattgaacttagcatctaatttagtatttttagtag	CRISPR spacer
tattaaacttagcatctaatttagtatttttagtag	Protospacer
****.*******************************

142. spacer 5.19|1734301|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 1, identity: 0.972

tattgaacttagcatctaatttagtatttttagtag	CRISPR spacer
tattaaacttagcatctaatttagtatttttagtag	Protospacer
****.*******************************

143. spacer 5.19|1734301|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 1, identity: 0.972

tattgaacttagcatctaatttagtatttttagtag	CRISPR spacer
tattaaacttagcatctaatttagtatttttagtag	Protospacer
****.*******************************

144. spacer 5.21|1734434|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.972

tagaaaaaagtgtacattgacaactgaatatcccct	CRISPR spacer
tagaaaaaagtgtacattaacaactgaatatcccct	Protospacer
******************.*****************

145. spacer 5.23|1734566|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.972

tccatctacttttttacttttagctttttctttagt	CRISPR spacer
tccatctacttttttacttttagctttttctttaat	Protospacer
**********************************.*

146. spacer 5.23|1734566|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

tccatctacttttttacttttagctttttctttagt	CRISPR spacer
tccatctacttttttacttttagctttttctttaat	Protospacer
**********************************.*

147. spacer 5.23|1734566|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 1, identity: 0.972

tccatctacttttttacttttagctttttctttagt	CRISPR spacer
tccatctacttttttacttttagctttttctttaat	Protospacer
**********************************.*

148. spacer 5.23|1734566|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 1, identity: 0.972

tccatctacttttttacttttagctttttctttagt	CRISPR spacer
tccatctacttttttacttttagctttttctttaat	Protospacer
**********************************.*

149. spacer 5.24|1734632|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

agtctgaagatgagcgaatgtgctatatctgtaata	CRISPR spacer
agtctgaagatgagagaatgtgctatatctgtaata	Protospacer
************** *********************

150. spacer 5.24|1734632|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 1, identity: 0.972

agtctgaagatgagcgaatgtgctatatctgtaata	CRISPR spacer
agtctgaagatgagagaatgtgctatatctgtaata	Protospacer
************** *********************

151. spacer 5.24|1734632|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 1, identity: 0.972

agtctgaagatgagcgaatgtgctatatctgtaata	CRISPR spacer
agtctgaagatgagagaatgtgctatatctgtaata	Protospacer
************** *********************

152. spacer 5.24|1734632|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 1, identity: 0.972

agtctgaagatgagcgaatgtgctatatctgtaata	CRISPR spacer
agtctgaagatgagagaatgtgctatatctgtaata	Protospacer
************** *********************

153. spacer 5.24|1734632|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.972

agtctgaagatgagcgaatgtgctatatctgtaata	CRISPR spacer
agtctgaagatgagagaatgtgctatatctgtaata	Protospacer
************** *********************

154. spacer 5.37|1735488|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 1, identity: 0.972

taaattattagttttaaaatttaaagggggaaaaaa	CRISPR spacer
taaattattagttttaaaatttaaagggggaaaata	Protospacer
********************************** *

155. spacer 5.38|1735554|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.972

gctaacttaattacttgttccacatttgctaatacc	CRISPR spacer
gctaacttaattacttgttccacatttgccaatacc	Protospacer
*****************************.******

156. spacer 6.5|1846144|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.972

aaaggtgtgaaaagagatgagttaaatcaaagtgaa	CRISPR spacer
aaaggtgtgaaaagagatgagttaaatcaaagcgaa	Protospacer
********************************.***

157. spacer 6.5|1846144|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 1, identity: 0.972

aaaggtgtgaaaagagatgagttaaatcaaagtgaa	CRISPR spacer
aaaggtgtgaaaagagatgagttaaatcaaagcgaa	Protospacer
********************************.***

158. spacer 6.5|1846144|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 1, identity: 0.972

aaaggtgtgaaaagagatgagttaaatcaaagtgaa	CRISPR spacer
aaaggtgtgaaaagagatgagttaaatcaaagcgaa	Protospacer
********************************.***

159. spacer 6.5|1846144|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 1, identity: 0.972

aaaggtgtgaaaagagatgagttaaatcaaagtgaa	CRISPR spacer
aaaggtgtgaaaagagatgagttaaatcaaagcgaa	Protospacer
********************************.***

160. spacer 6.5|1846144|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 1, identity: 0.972

aaaggtgtgaaaagagatgagttaaatcaaagtgaa	CRISPR spacer
aaaggtgtgaaaagagatgagttaaatcaaagcgaa	Protospacer
********************************.***

161. spacer 6.7|1846274|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.972

ttaatagcacatcttcgctttcaagtttctctatca	CRISPR spacer
ttaatagtacatcttcgctttcaagtttctctatca	Protospacer
*******.****************************

162. spacer 6.7|1846274|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

ttaatagcacatcttcgctttcaagtttctctatca	CRISPR spacer
ttaatagtacatcttcgctttcaagtttctctatca	Protospacer
*******.****************************

163. spacer 7.2|1893711|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.971

agggttgagttctggcgtattaagaggtgaggagc	CRISPR spacer
agggttgagttctggcgtattaagaggtgaggaac	Protospacer
*********************************.*

164. spacer 7.2|1893711|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.971

agggttgagttctggcgtattaagaggtgaggagc	CRISPR spacer
agggttgagttctggcgtattaagaggtgaggaac	Protospacer
*********************************.*

165. spacer 7.2|1893711|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 1, identity: 0.971

agggttgagttctggcgtattaagaggtgaggagc	CRISPR spacer
agggttgagttctggcgtattaagaggtgaggaac	Protospacer
*********************************.*

166. spacer 7.4|1893841|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.972

agtgaaagcaaggctattcctaattcttggagtgga	CRISPR spacer
agtgaaagcaaggctattcctaattcttggagttga	Protospacer
********************************* **

167. spacer 7.4|1893841|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.972

agtgaaagcaaggctattcctaattcttggagtgga	CRISPR spacer
agtgaaagcaaggctattcctaattctcggagtgga	Protospacer
***************************.********

168. spacer 7.4|1893841|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.972

agtgaaagcaaggctattcctaattcttggagtgga	CRISPR spacer
agtgaaagcaaggctattcctaattctcggagtgga	Protospacer
***************************.********

169. spacer 7.4|1893841|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 1, identity: 0.972

agtgaaagcaaggctattcctaattcttggagtgga	CRISPR spacer
agtgaaagcaaggctattcctaattctcggagtgga	Protospacer
***************************.********

170. spacer 7.5|1893906|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.974

aaataagttttgaagcagaatttacacacaataaacta	CRISPR spacer
aaataagttttgaagcagaatttacacataataaacta	Protospacer
****************************.*********

171. spacer 7.5|1893906|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.974

aaataagttttgaagcagaatttacacacaataaacta	CRISPR spacer
aaataagttttgaagcagaatttacacataataaacta	Protospacer
****************************.*********

172. spacer 7.5|1893906|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 1, identity: 0.974

aaataagttttgaagcagaatttacacacaataaacta	CRISPR spacer
aaataagttttgaagcagaatttacacataataaacta	Protospacer
****************************.*********

173. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.973

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattatacccccaaccaactacagttgcagggattt	Protospacer
******** ****************************

174. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.973

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattataaccccagccaactacagttgcagggattt	Protospacer
**************.**********************

175. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 1, identity: 0.973

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattatagccccaaccaactacagttgcagggattt	Protospacer
********.****************************

176. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.973

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattataaccccagccaactacagttgcagggattt	Protospacer
**************.**********************

177. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 1, identity: 0.973

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattataaccccaaccaaccacagttgcagggattt	Protospacer
********************.****************

178. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.973

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattatacccccaaccaactacagttgcagggattt	Protospacer
******** ****************************

179. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 1, identity: 0.973

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattataaccccagccaactacagttgcagggattt	Protospacer
**************.**********************

180. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 1, identity: 0.973

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattatagccccaaccaactacagttgcagggattt	Protospacer
********.****************************

181. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 1, identity: 0.973

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattataaccccaaccaactacagttgcagagattt	Protospacer
*******************************.*****

182. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.973

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattatacccccaaccaactacagttgcagggattt	Protospacer
******** ****************************

183. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 1, identity: 0.973

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattataaccccagccaactacagttgcagggattt	Protospacer
**************.**********************

184. spacer 7.22|1895028|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.973

tctattccaacataaagatacaaagtagtttcttttt	CRISPR spacer
tctattccaacataaagatataaagtagtttcttttt	Protospacer
********************.****************

185. spacer 7.22|1895028|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.973

tctattccaacataaagatacaaagtagtttcttttt	CRISPR spacer
tctattccaacataaagatataaagtagtttcttttt	Protospacer
********************.****************

186. spacer 7.28|1895424|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.974

gaatctggagcaggtttataagtttctggatagctaga	CRISPR spacer
gaatctggagcaggtttataagtttcgggatagctaga	Protospacer
************************** ***********

187. spacer 7.28|1895424|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 1, identity: 0.974

gaatctggagcaggtttataagtttctggatagctaga	CRISPR spacer
gaatctggagcaggtttataagtttcgggatagctaga	Protospacer
************************** ***********

188. spacer 7.28|1895424|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.974

gaatctggagcaggtttataagtttctggatagctaga	CRISPR spacer
gaatctggagcaggtttataagtttcgggatagctaga	Protospacer
************************** ***********

189. spacer 7.29|1895491|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 1, identity: 0.972

aaaaaatataaaagagctaagcacatgaaggataat	CRISPR spacer
aaaaaatataaaagagctaagcacatgaaagataat	Protospacer
*****************************.******

190. spacer 7.32|1895688|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.973

ggaagtataatttttactttatctccatactcaaaaa	CRISPR spacer
ggaagtataatttttactttatctccatattcaaaaa	Protospacer
*****************************.*******

191. spacer 8.10|2348433|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 1, identity: 0.973

ttttaaataacccccctccccttctga-ttttttcgtg	CRISPR spacer
ttttaaataacccccctccccttctgatttttttcgt-	Protospacer
*************************** *********

192. spacer 10.7|2849828|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG266000 (Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence) position: , mismatch: 1, identity: 0.974

gtcttttcaatctgttcaactaccttaggttcattcag	CRISPR spacer
gtcttttcaatctgttcaactaccttaggttcatttag	Protospacer
***********************************.**

193. spacer 1.3|780648|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 2, identity: 0.944

atatctttgtactcttgattttccagctttgatata	CRISPR spacer
atatctttgtactcttgattttctagttttgatata	Protospacer
***********************.**.*********

194. spacer 1.3|780648|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 2, identity: 0.944

atatctttgtactcttgattttccagctttgatata	CRISPR spacer
atatctttgtactcttgattttctagttttgatata	Protospacer
***********************.**.*********

195. spacer 1.6|780844|34|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 2, identity: 0.941

ttgcttatacttacaactttttctgctgtagcat	CRISPR spacer
ttgcttatacttacatttttttctgctgtagcat	Protospacer
*************** .*****************

196. spacer 1.7|780907|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 2, identity: 0.944

aaaactgtttctacttttttagtcccaagtaattcc	CRISPR spacer
aaaattgtttctacttttttagtaccaagtaattcc	Protospacer
****.****************** ************

197. spacer 1.7|780907|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 2, identity: 0.944

aaaactgtttctacttttttagtcccaagtaattcc	CRISPR spacer
aaaattgtttctacttttttagtctcaagtaattcc	Protospacer
****.*******************.***********

198. spacer 1.8|780972|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 2, identity: 0.946

cgcatttttgcttttatattgcttcttctatcttcta	CRISPR spacer
ctcatttttgcttttatattacttcttctatcttcta	Protospacer
* ******************.****************

199. spacer 1.8|780972|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 2, identity: 0.946

cgcatttttgcttttatattgcttcttctatcttcta	CRISPR spacer
cgcatctttgcttttatattacttcttctatcttcta	Protospacer
*****.**************.****************

200. spacer 1.8|780972|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 2, identity: 0.946

cgcatttttgcttttatattgcttcttctatcttcta	CRISPR spacer
ctcatttttgcttttatattacttcttctatcttcta	Protospacer
* ******************.****************

201. spacer 1.8|780972|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 2, identity: 0.946

cgcatttttgcttttatattgcttcttctatcttcta	CRISPR spacer
ctcatttttgcttttatattacttcttctatcttcta	Protospacer
* ******************.****************

202. spacer 1.8|780972|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.946

cgcatttttgcttttatattgcttcttctatcttcta	CRISPR spacer
ctcatttttgcttttatattacttcttctatcttcta	Protospacer
* ******************.****************

203. spacer 1.8|780972|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 2, identity: 0.946

cgcatttttgcttttatattgcttcttctatcttcta	CRISPR spacer
cgcatctttgcttttatattacttcttctatcttcta	Protospacer
*****.**************.****************

204. spacer 1.8|780972|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 2, identity: 0.946

cgcatttttgcttttatattgcttcttctatcttcta	CRISPR spacer
ctcatttttgcttttatattacttcttctatcttcta	Protospacer
* ******************.****************

205. spacer 1.8|780972|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 2, identity: 0.946

cgcatttttgcttttatattgcttcttctatcttcta	CRISPR spacer
cgcatctttgcttttatattacttcttctatcttcta	Protospacer
*****.**************.****************

206. spacer 1.25|782086|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 2, identity: 0.944

cagttgacacaatgagtaaaagcgaagcagagcaag	CRISPR spacer
cagttgttacaatgagtaaaagcgaagcagagcaag	Protospacer
****** .****************************

207. spacer 1.27|782217|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 2, identity: 0.946

catagattttggagatttaagggaaggcaatatgtgt	CRISPR spacer
tatagattttggagatttaagagaaggcaatatgtgt	Protospacer
.********************.***************

208. spacer 1.27|782217|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 2, identity: 0.946

catagattttggagatttaagggaaggcaatatgtgt	CRISPR spacer
tatagattttggagatttaagagaaggcaatatgtgt	Protospacer
.********************.***************

209. spacer 1.27|782217|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 2, identity: 0.946

catagattttggagatttaagggaaggcaatatgtgt	CRISPR spacer
tatagattttggagatttaagagaaggcaatatgtgt	Protospacer
.********************.***************

210. spacer 5.3|1733249|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 2, identity: 0.944

tttattgtagctgttataacttctttatttgtatta	CRISPR spacer
tttattgtagcttgtataacttctttatttgtatta	Protospacer
************  **********************

211. spacer 5.3|1733249|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 2, identity: 0.944

tttattgtagctgttataacttctttatttgtatta	CRISPR spacer
tttattgtagcttgtataacttctttatttgtatta	Protospacer
************  **********************

212. spacer 5.3|1733249|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.944

tttattgtagctgttataacttctttatttgtatta	CRISPR spacer
tttattgtagcttgtataacttctttatttgtatta	Protospacer
************  **********************

213. spacer 5.8|1733579|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 2, identity: 0.944

tatagttttgtagctctttcaagttcatctgcattt	CRISPR spacer
tatagttttgtagctctctcaagctcatctgcattt	Protospacer
*****************.*****.************

214. spacer 5.8|1733579|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 2, identity: 0.944

tatagttttgtagctctttcaagttcatctgcattt	CRISPR spacer
tatagttttgtagctctctcaagctcatctgcattt	Protospacer
*****************.*****.************

215. spacer 5.8|1733579|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.944

tatagttttgtagctctttcaagttcatctgcattt	CRISPR spacer
tatagttttgtagctctctcaagctcatctgcattt	Protospacer
*****************.*****.************

216. spacer 5.24|1734632|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 2, identity: 0.944

agtctgaagatgagcgaatgtgctatatctgtaata	CRISPR spacer
agtctgaagatgagcgaatgtgttatatctgtaatg	Protospacer
**********************.************.

217. spacer 6.8|1846339|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 2, identity: 0.946

tatatattggatgtcaatgtcaagaatacaaaattta	CRISPR spacer
tatatattagatatcaatgtcaagaatacaaaattta	Protospacer
********.***.************************

218. spacer 6.8|1846339|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.946

tatatattggatgtcaatgtcaagaatacaaaattta	CRISPR spacer
tatatattagatatcaatgtcaagaatacaaaattta	Protospacer
********.***.************************

219. spacer 6.8|1846339|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 2, identity: 0.946

tatatattggatgtcaatgtcaagaatacaaaattta	CRISPR spacer
tatatattagatatcaatgtcaagaatacaaaattta	Protospacer
********.***.************************

220. spacer 6.8|1846339|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 2, identity: 0.946

tatatattggatgtcaatgtcaagaatacaaaattta	CRISPR spacer
tatatattagatatcaatgtcaagaatacaaaattta	Protospacer
********.***.************************

221. spacer 7.1|1893644|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 2, identity: 0.947

tagactgatattcatccatactgatgattcctaaagaa	CRISPR spacer
tagaatgatattcatccatgctgatgattcctaaagaa	Protospacer
**** **************.******************

222. spacer 7.5|1893906|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 2, identity: 0.947

aaataagttttgaagcagaatttacacacaataaacta	CRISPR spacer
aaataagttttgaagcagagtttacacacaataaatta	Protospacer
*******************.***************.**

223. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MN718463 (Clostridium phage phiCDKH01, complete genome) position: , mismatch: 2, identity: 0.946

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattataaccccagccaacaacagttgcagggattt	Protospacer
**************.***** ****************

224. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 2, identity: 0.946

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
tcattataaccccatccaacaacagttgcagggattt	Protospacer
************** ***** ****************

225. spacer 7.28|1895424|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 2, identity: 0.947

gaatctggagcaggtttataagtttctggatagctaga	CRISPR spacer
gaatccggagcaggtttataagtttcgggatagctaga	Protospacer
*****.******************** ***********

226. spacer 7.28|1895424|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 2, identity: 0.947

gaatctggagcaggtttataagtttctggatagctaga	CRISPR spacer
gaatccggagcaggtttataagtttcgggatagctaga	Protospacer
*****.******************** ***********

227. spacer 7.28|1895424|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 2, identity: 0.947

gaatctggagcaggtttataagtttctggatagctaga	CRISPR spacer
gaatccggagcaggtttataagtttcgggatagctaga	Protospacer
*****.******************** ***********

228. spacer 7.29|1895491|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.944

aaaaaatataaaagagctaagcacatgaaggataat	CRISPR spacer
aaaaaatacaaaagagctaagcacatgaaagataat	Protospacer
********.********************.******

229. spacer 7.29|1895491|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 2, identity: 0.944

aaaaaatataaaagagctaagcacatgaaggataat	CRISPR spacer
aaaaaatacaaaagagctaagcacatgaaagataat	Protospacer
********.********************.******

230. spacer 7.29|1895491|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 2, identity: 0.944

aaaaaatataaaagagctaagcacatgaaggataat	CRISPR spacer
aaaaaatacaaaagagctaagcacatgaaagataat	Protospacer
********.********************.******

231. spacer 7.29|1895491|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 2, identity: 0.944

aaaaaatataaaagagctaagcacatgaaggataat	CRISPR spacer
aaaaaatacaaaagagctaagcacatgaaagataat	Protospacer
********.********************.******

232. spacer 7.37|1896018|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to KX905163 (Clostridioides phage phiSemix9P1, complete genome) position: , mismatch: 2, identity: 0.944

attaattcagaacttgcacagttgtatatagaactt	CRISPR spacer
gttaattcagaacttgcacagttatatatagaactt	Protospacer
.**********************.************

233. spacer 8.9|2348367|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 2, identity: 0.946

cttgatgtttagctttttgaaataattcaagttttaa	CRISPR spacer
cttgatgtttagccttttgaaataattcaagtttcaa	Protospacer
*************.********************.**

234. spacer 8.9|2348367|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 2, identity: 0.946

cttgatgtttagctttttgaaataattcaagttttaa	CRISPR spacer
cttgatgtttcgctttttgaaataattcaagctttaa	Protospacer
********** ********************.*****

235. spacer 8.9|2348367|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 2, identity: 0.946

cttgatgtttagctttttgaaataattcaagttttaa	CRISPR spacer
cttgatgtttagccttttgaaataattcaagtttcaa	Protospacer
*************.********************.**

236. spacer 8.9|2348367|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 2, identity: 0.946

cttgatgtttagctttttgaaataattcaagttttaa	CRISPR spacer
cttgatgtttagccttttgaaataattcaagtttcaa	Protospacer
*************.********************.**

237. spacer 8.10|2348433|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 2, identity: 0.946

ttttaaataacccccctccccttctgattttttcgtg	CRISPR spacer
ttttaaataacccccctcccattctgattttttcatg	Protospacer
******************** *************.**

238. spacer 8.10|2348433|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 2, identity: 0.946

ttttaaataacccccctccccttctgattttttcgtg	CRISPR spacer
ttttaaataacccccctcccattctgattttttcatg	Protospacer
******************** *************.**

239. spacer 8.10|2348433|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 2, identity: 0.946

ttttaaataacccccctccccttctgattttttcgtg	CRISPR spacer
ttttaaataacccccctcccattctgattttttcatg	Protospacer
******************** *************.**

240. spacer 8.10|2348433|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 2, identity: 0.946

ttttaaataacccccctccccttctgattttttcgtg	CRISPR spacer
ttttaaataacccccctcccattctgattttttcatg	Protospacer
******************** *************.**

241. spacer 8.10|2348433|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 2, identity: 0.946

ttttaaataacccccctccccttctgattttttcgtg	CRISPR spacer
ttttaaataacccccctcccattctgattttttcatg	Protospacer
******************** *************.**

242. spacer 8.10|2348433|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 2, identity: 0.946

ttttaaataacccccctccccttctgattttttcgtg	CRISPR spacer
ttttaaataacccccctcccattctgattttttcatg	Protospacer
******************** *************.**

243. spacer 8.14|2348696|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 2, identity: 0.944

gaactaacctcgtttcctgtgttaataaactatgat	CRISPR spacer
gaactaacctcgtttcctgtgttaacaagctatgat	Protospacer
*************************.**.*******

244. spacer 8.16|2348827|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 2, identity: 0.946

agtttatttggggattagataaaaataaggtagcatc	CRISPR spacer
agtttatttggggattagatggaaataaggtagcatc	Protospacer
********************..***************

245. spacer 10.5|2849695|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.946

caatatccatttctccttttccagcaatattaaattt	CRISPR spacer
cgatatccatttctccttttccagtaatattaaattt	Protospacer
*.**********************.************

246. spacer 10.5|2849695|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.946

caatatccatttctccttttccagcaatattaaattt	CRISPR spacer
cgatatccatttctccttttccagtaatattaaattt	Protospacer
*.**********************.************

247. spacer 10.5|2849695|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.946

caatatccatttctccttttccagcaatattaaattt	CRISPR spacer
cgatatccatttctccttttccagtaatattaaattt	Protospacer
*.**********************.************

248. spacer 10.5|2849695|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 2, identity: 0.946

caatatccatttctccttttccagcaatattaaattt	CRISPR spacer
cgatatccatttctccttttccagtaatattaaattt	Protospacer
*.**********************.************

249. spacer 10.5|2849695|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.946

caatatccatttctccttttccagcaatattaaattt	CRISPR spacer
cgatatccatttctccttttccagtaatattaaattt	Protospacer
*.**********************.************

250. spacer 10.8|2849895|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_008226 (Clostridioides difficile 630 plasmid pCD630, complete sequence) position: , mismatch: 2, identity: 0.947

cttatacttccgttattaaacatcatatctgctattat	CRISPR spacer
cttatacttccgttattaaacattatatctgctatcat	Protospacer
***********************.***********.**

251. spacer 10.8|2849895|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016319 (Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence) position: , mismatch: 2, identity: 0.947

cttatacttccgttattaaacatcatatctgctattat	CRISPR spacer
cttatacttccgttattaaacattatatctgctatcat	Protospacer
***********************.***********.**

252. spacer 13.1|4062522|38|CP026615|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.947

aaacaaacttcagatgcgttcagtttattctgttgctt	CRISPR spacer
aaacaaacttcacatgtgttcagtttattctgttgctt	Protospacer
************ ***.*********************

253. spacer 1.8|780972|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 3, identity: 0.919

cgcatttttgcttttatattgcttcttctatcttcta	CRISPR spacer
ctcatctttgcttttatattacttcttctatcttcta	Protospacer
* ***.**************.****************

254. spacer 1.8|780972|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 3, identity: 0.919

cgcatttttgcttttatattgcttcttctatcttcta	CRISPR spacer
ctcatctttgcttttatattacttcttctatcttcta	Protospacer
* ***.**************.****************

255. spacer 1.19|781697|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.914

gcataaaataccttcaaaaatagcttctactgaca	CRISPR spacer
acataaaataccttcaaaaacagcttctattgaca	Protospacer
.*******************.********.*****

256. spacer 1.19|781697|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.914

gcataaaataccttcaaaaatagcttctactgaca	CRISPR spacer
acataaaataccttcaaaaacagcttctattgaca	Protospacer
.*******************.********.*****

257. spacer 1.19|781697|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 3, identity: 0.914

gcataaaataccttcaaaaatagcttctactgaca	CRISPR spacer
acataaaataccttcaaaaacagcttctattgaca	Protospacer
.*******************.********.*****

258. spacer 1.19|781697|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 3, identity: 0.914

gcataaaataccttcaaaaatagcttctactgaca	CRISPR spacer
acataaaataccttcaaaaacagcttctattgaca	Protospacer
.*******************.********.*****

259. spacer 1.19|781697|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 3, identity: 0.914

gcataaaataccttcaaaaatagcttctactgaca	CRISPR spacer
acataaaataccttcaaaaacagcttctattgaca	Protospacer
.*******************.********.*****

260. spacer 1.19|781697|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 3, identity: 0.914

gcataaaataccttcaaaaatagcttctactgaca	CRISPR spacer
acataaaataccttcaaaaacagcttctattgaca	Protospacer
.*******************.********.*****

261. spacer 5.21|1734434|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 3, identity: 0.917

tagaaaaaagtgtacattgacaactgaatatcccct	CRISPR spacer
tagaaaaaagtgtacattgacaactgaatattcctc	Protospacer
*******************************.**..

262. spacer 5.25|1734698|37|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.919

ttaaatataataaatcgtaatgtacaaaaataactta-	CRISPR spacer
ttaaatataagaaatcataatgtac-aaaataacttat	Protospacer
********** *****.******** ***********

263. spacer 5.25|1734698|37|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 3, identity: 0.919

ttaaatataataaatcgtaatgtacaaaaataactta-	CRISPR spacer
ttaaatataagaaatcataatgtac-aaaataacttat	Protospacer
********** *****.******** ***********

264. spacer 5.25|1734698|37|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 3, identity: 0.919

ttaaatataataaatcgtaatgtacaaaaataactta-	CRISPR spacer
ttaaatataagaaatcataatgtac-aaaataacttat	Protospacer
********** *****.******** ***********

265. spacer 6.3|1846013|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 3, identity: 0.921

tggaaactaata---tttatataaaacttgtaaatatacag	CRISPR spacer
---aaactaataatgtttatataaaacttgtaaatatacag	Protospacer
   *********   **************************

266. spacer 6.3|1846013|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 3, identity: 0.921

tggaaactaata---tttatataaaacttgtaaatatacag	CRISPR spacer
---aaactaataatgtttatataaaacttgtaaatatacag	Protospacer
   *********   **************************

267. spacer 6.3|1846013|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 3, identity: 0.921

tggaaactaata---tttatataaaacttgtaaatatacag	CRISPR spacer
---aaactaataatgtttatataaaacttgtaaatatacag	Protospacer
   *********   **************************

268. spacer 6.3|1846013|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 3, identity: 0.921

tggaaactaata---tttatataaaacttgtaaatatacag	CRISPR spacer
---aaactaataatgtttatataaaacttgtaaatatacag	Protospacer
   *********   **************************

269. spacer 6.3|1846013|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 3, identity: 0.921

tggaaactaata---tttatataaaacttgtaaatatacag	CRISPR spacer
---aaactaataatgtttatataaaacttgtaaatatacag	Protospacer
   *********   **************************

270. spacer 6.3|1846013|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 3, identity: 0.921

tggaaactaata---tttatataaaacttgtaaatatacag	CRISPR spacer
---aaactaataatgtttatataaaacttgtaaatatacag	Protospacer
   *********   **************************

271. spacer 6.3|1846013|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.921

tggaaactaata---tttatataaaacttgtaaatatacag	CRISPR spacer
---aaactaataatgtttatataaaacttgtaaatatacag	Protospacer
   *********   **************************

272. spacer 6.3|1846013|38|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 3, identity: 0.921

tggaaactaata---tttatataaaacttgtaaatatacag	CRISPR spacer
---aaactaataatgtttatataaaacttgtaaatatacag	Protospacer
   *********   **************************

273. spacer 7.19|1894833|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 3, identity: 0.914

atatgacagcacaaggaacacctacagcacaagca	CRISPR spacer
acatgacagcacaagggacacctacagcacaagcc	Protospacer
*.**************.*****************

274. spacer 7.19|1894833|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 3, identity: 0.914

atatgacagcacaaggaacacctacagcacaagca	CRISPR spacer
acatgacagcacaagggacacctacagcacaagcc	Protospacer
*.**************.*****************

275. spacer 7.19|1894833|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 3, identity: 0.914

atatgacagcacaaggaacacctacagcacaagca	CRISPR spacer
acatgacagcacaagggacacctacagcacaagcc	Protospacer
*.**************.*****************

276. spacer 10.2|2849497|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 3, identity: 0.919

aagataaaagtgaaatatctgaatatatagaaaaact	CRISPR spacer
aagacaaaagtgaaatatctgagtatatagaaaaaat	Protospacer
****.*****************.************ *

277. spacer 10.4|2849629|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_005326 ([Clostridium] difficile plasmid pCD6, complete sequence) position: , mismatch: 3, identity: 0.919

tgtcccaaaatagcatcattactttaagttcagcatt	CRISPR spacer
tatcccaaaatagcatcattactttaagttcagcacg	Protospacer
*.*********************************.

278. spacer 8.8|2348301|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 4, identity: 0.892

aagaaggtgaaataatattctatgaagggcaattaaa	CRISPR spacer
aagaaggcgaaataatattctatgaaggacaatcgaa	Protospacer
*******.********************.****..**

279. spacer 8.9|2348367|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 4, identity: 0.892

cttgatgtttagctttttgaaataattcaagttttaa	CRISPR spacer
cttgatgtttggctttttgaaatagttcaagtttaag	Protospacer
**********.*************.********* *.

280. spacer 8.9|2348367|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 4, identity: 0.892

cttgatgtttagctttttgaaataattcaagttttaa	CRISPR spacer
cttgatgtttagctttctgaaataattcaagcctcaa	Protospacer
****************.**************..*.**

281. spacer 8.9|2348367|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 4, identity: 0.892

cttgatgtttagctttttgaaataattcaagttttaa	CRISPR spacer
cttgatgtttagctttctgaaataattcaagcctcaa	Protospacer
****************.**************..*.**

282. spacer 11.5|3229615|30|CP026615|CRISPRCasFinder matches to NZ_CP012644 (Rufibacter tibetensis strain 1351 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.867

-ctatgtattttaaggctgttccatcttggt	CRISPR spacer
actttgt-ttttaagcctgttccttcttggt	Protospacer
 ** *** ******* ******* *******

283. spacer 1.15|781432|39|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.872

agagacagtttaaaactaaatcagaagaaaagtcttata	CRISPR spacer
aaaagcaatttaaaactaaatcagaagaaaagtcatata	Protospacer
*.*..**.************************** ****

284. spacer 1.15|781432|39|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 5, identity: 0.872

agagacagtttaaaactaaatcagaagaaaagtcttata	CRISPR spacer
aaaagcaatttaaaactaaatcagaagaaaagtcatata	Protospacer
*.*..**.************************** ****

285. spacer 1.15|781432|39|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.872

agagacagtttaaaactaaatcagaagaaaagtcttata	CRISPR spacer
aaaagcaatttaaaactaaatcagaagaaaagtcatata	Protospacer
*.*..**.************************** ****

286. spacer 7.3|1893775|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 5, identity: 0.865

tggagaaggtcttggattagcaccaataggtcataga	CRISPR spacer
aggagaaggtcttggattagcaccaattggacacaaa	Protospacer
 ************************** ** **.*.*

287. spacer 7.24|1895161|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 5, identity: 0.861

gtcgtaaaacttaaagatgaaacaaaaggaatgatt	CRISPR spacer
gctataaaattaaaagatgaaacaaaaggaatgatt	Protospacer
*...*****.* ************************

288. spacer 8.1|2347838|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 5, identity: 0.861

attcgcaagttcttaatcaaaaacccaattttcttt	CRISPR spacer
attagcaagttcttcatcaaaaacccaattgccctt	Protospacer
*** ********** *************** .*.**

289. spacer 1.8|780972|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.838

cgcatttttgcttttatattgcttcttctatcttcta	CRISPR spacer
ctcatctttgcttttatattgcttcttctagtatcga	Protospacer
* ***.************************ . ** *

290. spacer 1.8|780972|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 6, identity: 0.838

cgcatttttgcttttatattgcttcttctatcttcta	CRISPR spacer
ctcatctttgcttttatattgcttcttctagtatcga	Protospacer
* ***.************************ . ** *

291. spacer 1.8|780972|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.838

cgcatttttgcttttatattgcttcttctatcttcta	CRISPR spacer
ctcatctttgcttttatattgcttcttctagtatcga	Protospacer
* ***.************************ . ** *

292. spacer 1.24|782021|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 6, identity: 0.833

ctagtaaattttgctaaaaggcactattattgtagt	CRISPR spacer
gaggcaaattttgttaaaaggtactattattgtagt	Protospacer
  .*.********.*******.**************

293. spacer 7.14|1894500|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 6, identity: 0.838

tcattataaccccaaccaactacagttgcagggattt	CRISPR spacer
gaaccataaccccaaccaagcacagttgcagggattt	Protospacer
  *..************** .****************

294. spacer 11.3|3229483|30|CP026615|CRISPRCasFinder matches to NZ_CP040675 (Exiguobacterium mexicanum strain A-EM plasmid punnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

tcactctt-----gccaatccaaattcactatttc	CRISPR spacer
-----cttagtgagccaatctaaattcactatttc	Protospacer
     ***     *******.**************

295. spacer 12.1|3944617|28|CP026615|CRISPRCasFinder matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 6, identity: 0.786

gttgattcatattgctttaacttattac	CRISPR spacer
gatgattcgtattgctgtaacttatcgt	Protospacer
* ******.******* ********...

296. spacer 5.10|1733711|35|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MN855865 (Myoviridae sp. isolate 346, complete genome) position: , mismatch: 7, identity: 0.8

attttataatggtaaaaaagagttttacatagctg-	CRISPR spacer
atttgataatggtaaaaaagcgtttt-tattattgc	Protospacer
**** *************** ***** .** ..**

297. spacer 7.42|1896348|37|CP026615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013206 (Paenibacillus sp. IHB B 3084 plasmid pHD03, complete sequence) position: , mismatch: 7, identity: 0.811

-tgaagttttcttttaaattatcatcctgtatagcctt	CRISPR spacer
atgaaa-attcatttaaatcatcatcctgtatagctct	Protospacer
 ****.  *** *******.***************..*

298. spacer 10.2|2849497|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043618 (Sulfurimonas sp. GYSZ_1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

aagataaaagtgaaatatctgaatatatagaaaaact	CRISPR spacer
caaataaaagtgaaatatatgaatatataaaaacttt	Protospacer
 *.*************** **********.***  .*

299. spacer 10.2|2849497|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043618 (Sulfurimonas sp. GYSZ_1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

aagataaaagtgaaatatctgaatatatagaaaaact	CRISPR spacer
caaataaaagtgaaatatatgaatatataaaaacttt	Protospacer
 *.*************** **********.***  .*

300. spacer 11.4|3229549|30|CP026615|CRISPRCasFinder matches to HM452126 (Aeromonas phage phiAS5, complete genome) position: , mismatch: 7, identity: 0.767

ttacatactccaaagcagtaccattttttt	CRISPR spacer
tcgcatactccaaagcagaacgatttgaat	Protospacer
*..*************** ** ****   *

301. spacer 11.7|3229747|30|CP026615|CRISPRCasFinder matches to NC_015426 (Clostridium botulinum BKT015925 plasmid p2BKT015925, complete sequence) position: , mismatch: 7, identity: 0.767

gaacacattttattgcattgcaattttgtc	CRISPR spacer
taacacattttattgcattacaattagtag	Protospacer
 ******************.*****

302. spacer 11.8|3229813|30|CP026615|CRISPRCasFinder matches to NZ_CP015323 (Bacillus filamentosus strain Hbe603 plasmid pBEH1, complete sequence) position: , mismatch: 7, identity: 0.767

ttatgtatattaaattcaatccattttttc	CRISPR spacer
gtttagacattaaattcaatctatttttta	Protospacer
 * *. *.*************.*******

303. spacer 11.8|3229813|30|CP026615|CRISPRCasFinder matches to NC_025171 (Acinetobacter sp. M131 plasmid pM131-5, complete sequence) position: , mismatch: 7, identity: 0.767

ttatgtatattaaattcaatccattttttc	CRISPR spacer
cattttttattaaattcactctattttttc	Protospacer
.  * * *********** **.********

304. spacer 5.10|1733711|35|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NC_017736 (Helicobacter cetorum MIT 99-5656 plasmid pHCD, complete sequence) position: , mismatch: 8, identity: 0.771

attttataatggtaaaaaagagttttacatagctg	CRISPR spacer
gttttttaatgctaaaaaagagttttttaatgcta	Protospacer
.**** ***** ************** .*  ***.

305. spacer 5.10|1733711|35|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NC_017736 (Helicobacter cetorum MIT 99-5656 plasmid pHCD, complete sequence) position: , mismatch: 8, identity: 0.771

attttataatggtaaaaaagagttttacatagctg	CRISPR spacer
gttttttaatgctaaaaaagagttttttaatgcta	Protospacer
.**** ***** ************** .*  ***.

306. spacer 5.27|1734831|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MH884511 (Exiguobacterium phage vB_EalM-132, complete genome) position: , mismatch: 8, identity: 0.778

ttttcttctagctcttttttcttagccattttacca	CRISPR spacer
atgtcttcttgctcttttttcctagccatctcagct	Protospacer
 * ****** ***********.*******.*.* *

307. spacer 5.37|1735488|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 8, identity: 0.778

taaattattagttttaaaatttaaagggggaaaaaa------	CRISPR spacer
taaattaatatttttaaaatttaaag------aaaacttatt	Protospacer
******* ** ***************      ****

308. spacer 5.37|1735488|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.778

taaattattagttttaaaatttaaagggggaaaaaa------	CRISPR spacer
taaattaatatttttaaaatttaaag------aaaacttatt	Protospacer
******* ** ***************      ****

309. spacer 7.24|1895161|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_013944 (Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK1, complete sequence) position: , mismatch: 8, identity: 0.778

gtcgtaaaac----ttaaagatgaaacaaaaggaatgatt	CRISPR spacer
----caaaatgtcattgaagatgaaacaataggaatgatt	Protospacer
    .****.    **.************ **********

310. spacer 7.24|1895161|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_013945 (Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK3, complete sequence) position: , mismatch: 8, identity: 0.778

gtcgtaaaac----ttaaagatgaaacaaaaggaatgatt	CRISPR spacer
----caaaatgtcattgaagatgaaacaataggaatgatt	Protospacer
    .****.    **.************ **********

311. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to AP013453 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S28-C28) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
ttattttagataataaagaagaaacaaacttt	Protospacer
****************.* *****.*  .*

312. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP025426 (Enterococcus faecium strain SC4 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

313. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to LT603679 (Enterococcus faecium isolate Ef_DMG1500501 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

314. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP040369 (Enterococcus faecium strain VB3240 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

315. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP043485 (Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

316. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP020485 (Enterococcus faecium strain CFSAN059070 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

317. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP013995 (Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

318. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP027518 (Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

319. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP027498 (Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

320. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP027507 (Enterococcus faecium strain AUSMDU00004055 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

321. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP046076 (Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

322. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_LR135236 (Enterococcus faecium isolate E7067 plasmid 2) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

323. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP019209 (Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

324. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_LR135429 (Enterococcus faecium isolate E8927 plasmid 2) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

325. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_LR135476 (Enterococcus faecium isolate E8423 plasmid 2) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

326. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_LR135220 (Enterococcus faecium isolate E7040 plasmid 2) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

327. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_LR135358 (Enterococcus faecium isolate E7948 plasmid 2) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

328. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_LR135352 (Enterococcus faecium isolate E8014 plasmid 2) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

329. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_LR134106 (Enterococcus faecium isolate E6043 plasmid 2) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

330. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
taattttagataataaagtagatatctaaaat	Protospacer
* **************.***** ** *   *

331. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP011829 (Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

332. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP045013 (Enterococcus faecium strain LAC7.2 plasmid pI, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

333. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
taattttagataataaagtagatatctaaaat	Protospacer
* **************.***** ** *   *

334. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP025687 (Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

335. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP040741 (Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

336. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP040877 (Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

337. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP032307 (Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

338. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
taattttagataataaagtagatatctaaaat	Protospacer
* **************.***** ** *   *

339. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP019993 (Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

340. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP035655 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

341. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP035137 (Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

342. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP035661 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

343. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP035667 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

344. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP035649 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

345. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP035221 (Enterococcus faecium strain SRCM103470 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

346. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to LR135186 (Enterococcus faecium isolate E4413 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

347. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_CP042833 (Enterococcus faecium strain FA3 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

348. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_MG674581 (Enterococcus faecium strain HL1 plasmid pHLSA, complete sequence) position: , mismatch: 8, identity: 0.75

ttattttagataataaggtagaaatattttag	CRISPR spacer
tttcccttgataataaggtaggaataatttat	Protospacer
** ...* *************.**** ****

349. spacer 10.2|2849497|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_041928 (Staphylococcus phage phiIBB-SEP1, complete genome) position: , mismatch: 8, identity: 0.784

aagataaaagtgaaatatctgaatatatagaaaaact	CRISPR spacer
aaactaaaagagaaatatctgattatataggtcaagt	Protospacer
**. ****** *********** *******.  ** *

350. spacer 10.2|2849497|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to KP027447 (Staphylococcus phage phiIPLA-C1C, complete genome) position: , mismatch: 8, identity: 0.784

aagataaaagtgaaatatctgaatatatagaaaaact	CRISPR spacer
aaactaaaagagaaatatctgattatataggtcaagt	Protospacer
**. ****** *********** *******.  ** *

351. spacer 10.2|2849497|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MH321490 (Staphylococcus phage Quidividi, complete genome) position: , mismatch: 8, identity: 0.784

aagataaaagtgaaatatctgaatatatagaaaaact	CRISPR spacer
aaactaaaagagaaatatctgattatataggtcaagt	Protospacer
**. ****** *********** *******.  ** *

352. spacer 10.2|2849497|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MF417868 (Uncultured Caudovirales phage clone 7AX_1, partial genome) position: , mismatch: 8, identity: 0.784

aagataaaagtgaaatatctgaatatatagaaaaact	CRISPR spacer
aaactaaaagagaaatatctgattatataggtcaagt	Protospacer
**. ****** *********** *******.  ** *

353. spacer 11.7|3229747|30|CP026615|CRISPRCasFinder matches to NC_014663 (Acinetobacter phage Acj9, complete genome) position: , mismatch: 8, identity: 0.733

gaacacattttattgcattgcaattttgtc	CRISPR spacer
aaacaaattttgttgcattgcaatgacaac	Protospacer
.**** *****.************  .. *

354. spacer 5.15|1734039|34|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NC_015851 (Acidithiobacillus caldus SM-1 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.735

tcaaatctaactgatgttcttttattatcaaaag	CRISPR spacer
acaaatctaactgaaggtcttttattggacgaat	Protospacer
 ************* * *********.   .**

355. spacer 5.15|1734039|34|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP005987 (Acidithiobacillus caldus ATCC 51756 plasmid megap mpAca1.1, complete sequence) position: , mismatch: 9, identity: 0.735

tcaaatctaactgatgttcttttattatcaaaag	CRISPR spacer
acaaatctaactgaaggtcttttattggacgaat	Protospacer
 ************* * *********.   .**

356. spacer 5.15|1734039|34|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026329 (Acidithiobacillus caldus strain MTH-04 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735

tcaaatctaactgatgttcttttattatcaaaag	CRISPR spacer
acaaatctaactgaaggtcttttattggacgaat	Protospacer
 ************* * *********.   .**

357. spacer 5.35|1735357|35|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MT774406 (CrAssphage cr124_1, complete genome) position: , mismatch: 9, identity: 0.743

tctatgttatgtacatgattaccttgtttgagtag	CRISPR spacer
aggatattatgtacatgattagcttgttaaagatg	Protospacer
   **.*************** ****** .**  *

358. spacer 7.38|1896083|38|CP026615|CRISPRCasFinder,CRT matches to MG065657 (UNVERIFIED: Campylobacter phage C4, complete genome) position: , mismatch: 9, identity: 0.763

atattcatatactacatattcttttccttcatcattaa	CRISPR spacer
aatttgacgatctacatattcttcaccttcatcattaa	Protospacer
*  ** *..  ************. *************

359. spacer 7.38|1896083|38|CP026615|CRISPRCasFinder,CRT matches to MG065649 (UNVERIFIED: Campylobacter phage A143, complete genome) position: , mismatch: 9, identity: 0.763

atattcatatactacatattcttttccttcatcattaa	CRISPR spacer
aatttgacgatctacatattcttcaccttcatcattaa	Protospacer
*  ** *..  ************. *************

360. spacer 7.38|1896083|38|CP026615|CRISPRCasFinder,CRT matches to KC710998 (Shigella phage pSf-1, complete genome) position: , mismatch: 9, identity: 0.763

atattcatatactacatattcttttccttcatcattaa	CRISPR spacer
aatttgacgatctacatattcttcaccttcatcattaa	Protospacer
*  ** *..  ************. *************

361. spacer 7.38|1896083|38|CP026615|CRISPRCasFinder,CRT matches to NC_049821 (Salmonella phage slyngel, complete genome) position: , mismatch: 9, identity: 0.763

atattcatatactacatattcttttccttcatcattaa	CRISPR spacer
aatttgacgatctacatattcttcaccttcatcattaa	Protospacer
*  ** *..  ************. *************

362. spacer 7.38|1896083|38|CP026615|CRISPRCasFinder,CRT matches to MK373798 (Escherichia phage vB_EcoS_G29-2, complete genome) position: , mismatch: 9, identity: 0.763

atattcatatactacatattcttttccttcatcattaa	CRISPR spacer
aatttgacgatctacatattcttcaccttcatcattaa	Protospacer
*  ** *..  ************. *************

363. spacer 7.38|1896083|38|CP026615|CRISPRCasFinder,CRT matches to MG065681 (UNVERIFIED: Campylobacter phage A139, complete genome) position: , mismatch: 9, identity: 0.763

atattcatatactacatattcttttccttcatcattaa	CRISPR spacer
aatttgacgatctacatattcttcaccttcatcattaa	Protospacer
*  ** *..  ************. *************

364. spacer 7.38|1896083|38|CP026615|CRISPRCasFinder,CRT matches to MG065680 (UNVERIFIED: Campylobacter phage A113, complete genome) position: , mismatch: 9, identity: 0.763

atattcatatactacatattcttttccttcatcattaa	CRISPR spacer
aatttgacgatctacatattcttcaccttcatcattaa	Protospacer
*  ** *..  ************. *************

365. spacer 7.38|1896083|38|CP026615|CRISPRCasFinder,CRT matches to MG065643 (UNVERIFIED: Campylobacter phage E6, complete genome) position: , mismatch: 9, identity: 0.763

atattcatatactacatattcttttccttcatcattaa	CRISPR spacer
aatttgacgatctacatattcttcaccttcatcattaa	Protospacer
*  ** *..  ************. *************

366. spacer 8.12|2348564|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR215006 (Mycoplasma conjunctivae strain NCTC10147 plasmid 10) position: , mismatch: 9, identity: 0.757

tgaaaaattaaaagaattaatagataagcaattaata	CRISPR spacer
tgaaaaattaaatgaattaatagttaaaataaaatca	Protospacer
************ ********** ***.  *  * .*

367. spacer 8.12|2348564|37|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to LR214957 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 3) position: , mismatch: 9, identity: 0.757

tgaaaaattaaaagaattaatagataagcaattaata	CRISPR spacer
tgaaaaattaaatgaattaatagttaaaataaaatca	Protospacer
************ ********** ***.  *  * .*

368. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 9, identity: 0.719

ttattttagataataaggtagaaatattttag	CRISPR spacer
atgataataataattaggtagaaatgttttag	Protospacer
 *. *   .***** **********.******

369. spacer 9.1|2513690|32|CP026615|CRISPRCasFinder matches to NC_019763 (Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.01, complete sequence) position: , mismatch: 9, identity: 0.719

ttattttagataataaggtagaaatattttag	CRISPR spacer
cttcgtgagataataacttagaaatattttca	Protospacer
.* . * *********  ************ .

370. spacer 1.2|780584|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to MN033866 (Leviviridae sp. isolate H1_Bulk_Litter_6_scaffold_308 hypothetical protein (H1BulkLitter6308_000001), hypothetical protein (H1BulkLitter6308_000002), RNA-dependent RNA polymerase (H1BulkLitter6308_000003), and hypothetical protein (H1BulkLitter6308_000004) genes, complete cds) position: , mismatch: 10, identity: 0.714

attctttatacagagaaacacgatactatttacag	CRISPR spacer
taaagcgatacagagaaacacgatactctgtacgg	Protospacer
     . ******************** * ***.*

371. spacer 5.10|1733711|35|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034172 (Chryseobacterium taklimakanense strain H4753 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

attttataatggtaaaaaagagttttacatagctg	CRISPR spacer
tttttataatgttaaaaaagatttttcttttatta	Protospacer
 ********** ********* **** . * ..*.

372. spacer 5.22|1734500|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050647 (Escherichia coli strain PapM-36-2 plasmid pIncFIB, complete sequence) position: , mismatch: 10, identity: 0.722

acacttattttgattttatttattttaattttttat	CRISPR spacer
gtgataaagatgattttattttttttaatcttttat	Protospacer
... * *   *********** *******.******

373. spacer 5.22|1734500|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to NC_019348 (Lactococcus lactis subsp. cremoris plasmid pAF07, complete sequence) position: , mismatch: 10, identity: 0.722

acacttattttgattttatttattttaattttttat	CRISPR spacer
acgaaatttttgatttgctttattttaatttttgcg	Protospacer
**.    *********  ***************

374. spacer 5.22|1734500|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MN693542 (Marine virus AFVG_25M165, complete genome) position: , mismatch: 10, identity: 0.722

acacttattttgattttatttattttaattttttat	CRISPR spacer
ctttatattttgattttattttttctaatttatgaa	Protospacer
 . . **************** **.****** * *

375. spacer 7.19|1894833|35|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP003988 (Streptomyces sp. 769 plasmid pSGZL, complete sequence) position: , mismatch: 10, identity: 0.714

atatgacagcacaaggaacacctacagcacaagca	CRISPR spacer
cggggacagcacaaggcccacctacagcacgtgtt	Protospacer
  . ************  ************. *.

376. spacer 5.22|1734500|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MN693056 (Marine virus AFVG_25M10, complete genome) position: , mismatch: 11, identity: 0.694

acacttattttgattttatttattttaattttttat	CRISPR spacer
ctttatattttgattttattttttctaatttatgca	Protospacer
 . . **************** **.****** *

377. spacer 5.22|1734500|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MN693152 (Marine virus AFVG_25M11, complete genome) position: , mismatch: 11, identity: 0.694

acacttattttgattttatttattttaattttttat	CRISPR spacer
ctttatattttgattttattttttctaatttatgca	Protospacer
 . . **************** **.****** *

378. spacer 5.22|1734500|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MN693342 (Marine virus AFVG_25M9, complete genome) position: , mismatch: 11, identity: 0.694

acacttattttgattttatttattttaattttttat	CRISPR spacer
ctttatattttgattttattttttctaatttatgca	Protospacer
 . . **************** **.****** *

379. spacer 5.22|1734500|36|CP026615|CRT,PILER-CR,CRISPRCasFinder matches to MN693020 (Marine virus AFVG_117M64, complete genome) position: , mismatch: 11, identity: 0.694

acacttattttgattttatttattttaattttttat	CRISPR spacer
ctttatattttgattttattttttctaatttatgca	Protospacer
 . . **************** **.****** *

380. spacer 8.17|2348893|36|CP026615|PILER-CR,CRISPRCasFinder,CRT matches to NC_014389 (Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence) position: , mismatch: 11, identity: 0.694

aatctgtttttcttcttcttctgcattatctacaag	CRISPR spacer
ctcctgtttttcttcttcttcggtattataattgat	Protospacer
  .****************** *.*****   ..*

381. spacer 7.43|1896414|37|CP026615|CRISPRCasFinder,CRT,PILER-CR matches to HG796590 (Uncultured bacterium plasmid pRGI01759) position: , mismatch: 12, identity: 0.676

atacaggaacaggagtcggaacagaaaaaaacgcctc	CRISPR spacer
gggttggaacaggggttggaacagaaaaaaagctttt	Protospacer
. .. ********.**.**************  ..*.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

955740 : 964692

Catovirus(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVD37395.1\|955740_956580_+	glycosyltransferase family 2 protein	A0A2P1ELT8	Moumouvirus	1.8e-05	25.9
AVD37396.1\|956579_957770_+	glycerophosphotransferase	NA	NA	NA	NA
AVD37397.1\|957798_958548_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.2e-16	38.8
AVD37398.1\|958569_959478_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
AVD37399.1\|959525_960278_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	3.5e-16	40.5
AVD37829.1\|960303_961599_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.4e-89	43.4
AVD37400.1\|961604_962696_+	glycosyltransferase family 4 protein	A0A1V0SL50	Klosneuvirus	1.0e-16	26.2
AVD37401.1\|962778_964692_+	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	1.1e-26	29.8

DBSCAN-SWA_2

1346278 : 1367574

Streptococcus_phage(89.47%)

integrase

attL 1340759:1340773|attR 1351288:1351302

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1340759:1340773	attL	NA	NA	NA	NA
AVD37707.1\|1346278_1347652_+	MFS transporter	S4TR35	Salmonella_phage	2.5e-07	22.0
AVD37708.1\|1347839_1348607_-	PucR family transcriptional regulator	NA	NA	NA	NA
AVD37709.1\|1348636_1349746_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	Q6GZ03	Mycoplasma_phage	1.1e-21	33.3
AVD37710.1\|1350050_1351268_-\|integrase	site-specific integrase	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
AVD37711.1\|1351349_1351553_-	excisionase	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
1351288:1351302	attR	NA	NA	NA	NA
AVD37712.1\|1351536_1351788_+	hypothetical protein	NA	NA	NA	NA
AVD37713.1\|1352013_1352244_-	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
AVD37714.1\|1352240_1352663_-	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
AVD37836.1\|1352891_1352963_-	hypothetical protein	NA	NA	NA	NA
AVD37715.1\|1353167_1353521_+	XRE family transcriptional regulator	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
AVD37716.1\|1353580_1353766_-	conjugal transfer protein	D0R0F6	Streptococcus_phage	3.9e-17	67.9
AVD37717.1\|1353866_1355786_-	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	99.4
AVD37718.1\|1355801_1355888_-	tetracycline resistance protein	NA	NA	NA	NA
AVD37719.1\|1356162_1357095_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	3.1e-171	99.4
AVD37720.1\|1357091_1358093_-	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
AVD34318.1\|1360270_1362718_-	ATP/GTP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
AVD34319.1\|1362701_1363208_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
AVD34320.1\|1363182_1363680_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
AVD34321.1\|1363796_1364018_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
AVD34322.1\|1364060_1365266_-	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
AVD34323.1\|1365288_1365441_-	conjugal transfer protein	NA	NA	NA	NA
AVD34324.1\|1365443_1366829_-	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
AVD34325.1\|1366857_1367244_-	DUF961 domain-containing protein	A0A1S5SF96	Streptococcus_phage	3.0e-64	100.0
AVD34326.1\|1367259_1367574_-	DUF961 domain-containing protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0

DBSCAN-SWA_3

2492918 : 2513490

Streptococcus_phage(94.74%)

integrase

attL 2484923:2484938|attR 2512812:2512827

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2484923:2484938	attL	NA	NA	NA	NA
AVD35290.1\|2492918_2494136_-\|integrase	site-specific integrase	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
AVD35291.1\|2494217_2494421_-	excisionase	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
AVD35292.1\|2494404_2494656_+	hypothetical protein	NA	NA	NA	NA
AVD35293.1\|2494881_2495112_-	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
AVD35294.1\|2495108_2495531_-	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
AVD37761.1\|2495759_2495831_-	hypothetical protein	NA	NA	NA	NA
AVD35295.1\|2496035_2496389_+	XRE family transcriptional regulator	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
AVD35296.1\|2496448_2496634_-	conjugal transfer protein	D0R0F6	Streptococcus_phage	3.9e-17	67.9
AVD35297.1\|2496734_2498654_-	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	99.4
AVD35298.1\|2498669_2498756_-	tetracycline resistance protein	NA	NA	NA	NA
AVD35299.1\|2499030_2499963_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	3.1e-171	99.4
AVD35300.1\|2499959_2500961_-	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
AVD35301.1\|2500957_2503135_-	YtxH domain-containing protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	99.2
AVD35302.1\|2503137_2505585_-	ATP/GTP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
AVD35303.1\|2505568_2506075_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
AVD35304.1\|2506049_2506547_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
AVD35305.1\|2506663_2506885_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
AVD35306.1\|2506927_2508133_-	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
AVD35307.1\|2508155_2508308_-	conjugal transfer protein	NA	NA	NA	NA
AVD35308.1\|2508310_2509696_-	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
AVD35309.1\|2509724_2510111_-	DUF961 domain-containing protein	A0A1S5SF96	Streptococcus_phage	3.0e-64	100.0
AVD35310.1\|2510126_2510441_-	DUF961 domain-containing protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
AVD35311.1\|2510463_2510583_-	hypothetical protein	NA	NA	NA	NA
AVD35312.1\|2510798_2512736_-	ABC transporter permease	NA	NA	NA	NA
AVD35313.1\|2512722_2513490_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.4e-30	34.8
2512812:2512827	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2606414 : 2616143

Pandoravirus(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVD35394.1\|2606414_2607587_-	RNA polymerase sigma factor RpoD	M4SMP8	Cyanophage	9.7e-37	36.8
AVD35395.1\|2607598_2609389_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.2e-51	32.6
AVD35396.1\|2609643_2610429_-	3-deoxy-7-phosphoheptulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.7e-13	27.9
AVD35397.1\|2610409_2610916_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	S4VNV0	Pandoravirus	4.2e-13	33.9
AVD37765.1\|2610908_2611274_-	dihydroneopterin aldolase	NA	NA	NA	NA
AVD35398.1\|2611284_2612088_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	1.1e-23	30.0
AVD35399.1\|2612141_2612714_-	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	2.3e-44	51.6
AVD35400.1\|2612739_2613441_-	hypothetical protein	NA	NA	NA	NA
AVD35401.1\|2613474_2614218_-	aminodeoxychorismate lyase	NA	NA	NA	NA
AVD35402.1\|2614207_2615566_-	aminodeoxychorismate synthase component I	S4VNU7	Pandoravirus	7.8e-38	41.6
AVD35403.1\|2615558_2616143_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.5e-57	53.2

DBSCAN-SWA_5

2694603 : 2744746

Clostridium_phage(48.0%)

plate,transposase,portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVD35464.1\|2694603_2695002_+	helix-turn-helix domain-containing protein	A0A059T669	Listeria_phage	1.0e-06	34.5
AVD35465.1\|2695218_2695440_-	hypothetical protein	NA	NA	NA	NA
AVD35466.1\|2695459_2695669_-	XRE family transcriptional regulator	Q5YAA3	Bacillus_phage	5.9e-06	47.2
AVD35467.1\|2695964_2696384_+	XRE family transcriptional regulator	S5MUV6	Brevibacillus_phage	1.6e-05	35.9
AVD35468.1\|2696611_2697067_+	hypothetical protein	NA	NA	NA	NA
AVD35469.1\|2697277_2697538_-	hypothetical protein	E2ELK7	Clostridium_phage	9.9e-35	90.6
AVD35470.1\|2697800_2698154_-	hypothetical protein	A0A0A8WJF2	Clostridium_phage	5.5e-12	42.1
AVD35471.1\|2698170_2703348_-	chromosome condensation regulator	A0A0A8WEY5	Clostridium_phage	2.6e-81	27.2
AVD35472.1\|2703369_2704356_-\|tail	phage tail protein	A0A2H4J039	uncultured_Caudovirales_phage	7.6e-59	45.8
AVD35473.1\|2704356_2705055_-	DUF2313 domain-containing protein	A0A090D815	Clostridium_phage	9.5e-48	56.9
AVD35474.1\|2705051_2706104_-\|plate	baseplate J/gp47 family protein	A0A0A8WFP3	Clostridium_phage	3.5e-139	70.4
AVD35475.1\|2706096_2706525_-	DUF2634 domain-containing protein	A0A0A8WJ32	Clostridium_phage	3.7e-63	81.0
AVD35476.1\|2706524_2706851_-	DUF2577 domain-containing protein	J9QE86	Clostridium_phage	3.9e-52	92.6
AVD35477.1\|2706866_2708396_-	cell wall hydrolase	A0A1V0DZX6	Clostridioides_phage	1.3e-243	81.1
AVD35478.1\|2708677_2709100_-	hypothetical protein	A0A090DBR9	Clostridium_phage	1.7e-52	71.1
AVD35479.1\|2709099_2711553_-	hypothetical protein	A0A1V0DZX3	Clostridioides_phage	1.4e-16	58.4
AVD35480.1\|2711552_2711720_-	hypothetical protein	NA	NA	NA	NA
AVD35481.1\|2711746_2712193_-\|portal	phage portal protein	A0A090EUD0	Clostridium_phage	8.2e-13	36.0
AVD35482.1\|2712306_2712735_-\|portal	phage portal protein	A0A1V0DZX1	Clostridioides_phage	2.8e-34	51.8
AVD35483.1\|2712748_2713813_-\|tail	phage tail sheath protein	A0A1V0DZX4	Clostridioides_phage	5.8e-97	53.1
AVD35484.1\|2713817_2714261_-	hypothetical protein	A0A1V0DZX9	Clostridioides_phage	2.0e-19	36.7
AVD35485.1\|2714509_2714950_-	hypothetical protein	A0A090EUN5	Clostridium_phage	1.1e-28	47.9
AVD35486.1\|2715053_2715251_-	XRE family transcriptional regulator	NA	NA	NA	NA
AVD35487.1\|2715419_2715740_+	XRE family transcriptional regulator	A0A0A8WE28	Clostridium_phage	9.7e-24	55.5
AVD35488.1\|2715821_2716328_+	hypothetical protein	A0A0A8WEK1	Clostridium_phage	1.1e-56	67.7
AVD35489.1\|2716491_2716908_+	hypothetical protein	NA	NA	NA	NA
AVD35490.1\|2717028_2717784_+	peptidylprolyl isomerase	NA	NA	NA	NA
AVD35491.1\|2717926_2718355_-	CBS domain-containing protein	NA	NA	NA	NA
AVD35492.1\|2718775_2718976_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	2.7e-16	66.2
AVD35493.1\|2719158_2720313_-	amidase domain-containing protein	NA	NA	NA	NA
AVD35494.1\|2720563_2721385_+	pyridoxamine kinase	NA	NA	NA	NA
AVD37767.1\|2721460_2722852_-	sensor histidine kinase	NA	NA	NA	NA
AVD35495.1\|2722985_2723756_-	lantibiotic immunity ABC transporter MutG family permease subunit	NA	NA	NA	NA
AVD35496.1\|2723757_2724477_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	NA	NA	NA
AVD35497.1\|2724478_2725186_-	lantibiotic protection ABC transporter ATP-binding subunit	A0A2H4PQG7	Staphylococcus_phage	2.3e-57	49.8
AVD35498.1\|2725305_2725842_-	hypothetical protein	NA	NA	NA	NA
AVD35499.1\|2725943_2727014_-	hypothetical protein	NA	NA	NA	NA
AVD35500.1\|2727006_2728065_-	DUF1700 domain-containing protein	NA	NA	NA	NA
AVD35501.1\|2728051_2728384_-	PadR family transcriptional regulator	NA	NA	NA	NA
AVD37768.1\|2728582_2729704_+	galactosyldiacylglycerol synthase	NA	NA	NA	NA
AVD35502.1\|2729831_2731730_-	glutamine synthetase	NA	NA	NA	NA
AVD35503.1\|2732044_2732821_+	exonuclease	NA	NA	NA	NA
AVD35504.1\|2732912_2733665_-	exodeoxyribonuclease III	E3T4M6	Cafeteria_roenbergensis_virus	1.6e-56	44.4
AVD35505.1\|2733785_2734736_-	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA
AVD35506.1\|2735120_2736317_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
AVD35507.1\|2736535_2736988_-	MarR family transcriptional regulator	NA	NA	NA	NA
AVD35508.1\|2737288_2738734_-	adenylosuccinate lyase	NA	NA	NA	NA
AVD35509.1\|2738872_2739784_-	recombinase	NA	NA	NA	NA
AVD35510.1\|2740040_2740865_+	undecaprenyl-diphosphatase	NA	NA	NA	NA
AVD35511.1\|2740904_2741435_+	signal peptidase I	NA	NA	NA	NA
AVD35512.1\|2741514_2743296_-	DNA helicase	NA	NA	NA	NA
AVD35513.1\|2743347_2743563_-	hypothetical protein	NA	NA	NA	NA
AVD35514.1\|2743627_2744746_-\|transposase	transposase	A0A0H3UZC2	Geobacillus_virus	2.4e-109	53.0

DBSCAN-SWA_6

3448547 : 3522611

Streptococcus_phage(25.0%)

protease,coat,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVD36104.1\|3448547_3449441_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AVD36105.1\|3449606_3450431_+	MerR family transcriptional regulator	NA	NA	NA	NA
AVD36106.1\|3450553_3451135_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AVD36107.1\|3451238_3451415_+	hypothetical protein	NA	NA	NA	NA
AVD36108.1\|3451810_3452983_+	ATP-binding protein	X5JAC0	Clostridium_phage	4.0e-14	25.3
AVD36109.1\|3453319_3453889_-	GrpB family protein	NA	NA	NA	NA
AVD36110.1\|3454292_3454865_+	urea carboxylase-associated family protein	NA	NA	NA	NA
AVD36111.1\|3455553_3457128_-	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA
AVD36112.1\|3457288_3457825_-	GrpB family protein	NA	NA	NA	NA
AVD36113.1\|3457898_3458312_-	DUF3795 domain-containing protein	NA	NA	NA	NA
AVD36114.1\|3460114_3460648_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	5.9e-34	49.4
AVD36115.1\|3460809_3461463_-	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA
AVD36116.1\|3462254_3462827_-	manganese catalase family protein	NA	NA	NA	NA
AVD36117.1\|3462890_3463154_-\|coat	spore coat protein CotJB	NA	NA	NA	NA
AVD36118.1\|3463153_3463375_-\|coat	spore coat associated protein CotJA	NA	NA	NA	NA
AVD36119.1\|3463872_3464409_-	chromosome partitioning protein ParB	A0A220GKT8	Streptococcus_phage	2.1e-63	69.7
AVD36120.1\|3464426_3465740_-	DUF3440 domain-containing protein	A0A220GKF8	Streptococcus_phage	3.3e-94	41.5
AVD36121.1\|3466074_3466515_+	DUF3788 domain-containing protein	NA	NA	NA	NA
AVD36122.1\|3466684_3466873_-	hypothetical protein	NA	NA	NA	NA
AVD36123.1\|3467066_3467258_+	hypothetical protein	NA	NA	NA	NA
AVD36124.1\|3467770_3472981_-	hypothetical protein	NA	NA	NA	NA
AVD36125.1\|3472995_3475512_-	ATP-binding protein	NA	NA	NA	NA
AVD36126.1\|3475931_3476219_-	hypothetical protein	NA	NA	NA	NA
AVD36127.1\|3476238_3476514_-	hypothetical protein	NA	NA	NA	NA
AVD36128.1\|3477640_3478822_+	GGDEF domain-containing protein	G3MA91	Bacillus_virus	6.6e-09	26.0
AVD37787.1\|3478823_3480053_+	GGDEF domain-containing protein	NA	NA	NA	NA
AVD36129.1\|3480100_3482185_+	EAL domain-containing protein	G3MA91	Bacillus_virus	2.9e-07	26.6
AVD36130.1\|3482287_3482452_-	hypothetical protein	NA	NA	NA	NA
AVD36131.1\|3482444_3485012_-	pyruvate, phosphate dikinase	A0A1V0SGR7	Hokovirus	3.5e-47	39.2
AVD36132.1\|3485014_3485620_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AVD36133.1\|3485988_3487449_-	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AVD36134.1\|3487740_3488328_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AVD36135.1\|3488378_3488612_+	hypothetical protein	NA	NA	NA	NA
AVD36136.1\|3488620_3489871_+	MFS transporter	NA	NA	NA	NA
AVD36137.1\|3490031_3490601_+	hydrolase	NA	NA	NA	NA
AVD36138.1\|3490942_3492283_-	ATP-binding protein	X5JAC0	Clostridium_phage	1.4e-79	39.7
AVD36139.1\|3492642_3492840_+	PadR family transcriptional regulator	NA	NA	NA	NA
AVD36140.1\|3493187_3494279_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
AVD36141.1\|3495003_3496923_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.8e-144	39.9
AVD36142.1\|3497715_3498318_-	DUF445 family protein	NA	NA	NA	NA
AVD36143.1\|3498496_3499315_-	hypothetical protein	NA	NA	NA	NA
AVD36144.1\|3499317_3500079_-	hypothetical protein	NA	NA	NA	NA
AVD36145.1\|3501127_3502246_-\|transposase	transposase	A0A0H3UZC2	Geobacillus_virus	1.4e-109	52.7
AVD36146.1\|3503353_3504358_-	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
AVD36147.1\|3504645_3505494_-	DegV family protein	NA	NA	NA	NA
AVD36148.1\|3505528_3505999_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
AVD37788.1\|3506192_3506810_-	endonuclease III	NA	NA	NA	NA
AVD36149.1\|3507247_3509485_-	ATP-binding protein	A0A2H4UU76	Bodo_saltans_virus	6.9e-07	33.7
AVD36150.1\|3509590_3510505_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
AVD36151.1\|3511262_3511667_+	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA
AVD36152.1\|3511900_3512896_-	aldo/keto reductase	NA	NA	NA	NA
AVD36153.1\|3513178_3514015_-	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	2.8e-30	33.5
AVD36154.1\|3514497_3515061_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AVD36155.1\|3515158_3516088_-	glutaminase	NA	NA	NA	NA
AVD36156.1\|3516661_3518329_-	nucleoside kinase	NA	NA	NA	NA
AVD36157.1\|3518402_3519158_-	endonuclease	NA	NA	NA	NA
AVD36158.1\|3519167_3519704_-	signal peptidase I	NA	NA	NA	NA
AVD36159.1\|3519869_3520406_-	signal peptidase I	NA	NA	NA	NA
AVD36160.1\|3520505_3521816_-	methylase	NA	NA	NA	NA
AVD36161.1\|3521894_3522611_-\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_7

3801210 : 3817393

Synechococcus_phage(23.08%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVD36394.1\|3801210_3801879_-	lytic transglycosylase domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	4.1e-24	46.9
AVD36395.1\|3801916_3802900_-	dTDP-glucose 4,6-dehydratase	A0A291LAD7	Escherichia_phage	3.8e-79	47.1
AVD36396.1\|3802937_3803495_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	7.5e-48	53.6
AVD36397.1\|3803543_3804413_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	6.2e-97	61.5
AVD36398.1\|3804521_3805394_-	dTDP-4-dehydrorhamnose reductase	H9NCE8	Sphingomonas_phage	3.3e-13	29.0
AVD36399.1\|3805597_3809404_-	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.2e-30	24.1
AVD36400.1\|3809428_3810679_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
AVD36401.1\|3810689_3812222_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	E3SNU8	Prochlorococcus_phage	2.3e-38	49.7
AVD36402.1\|3812214_3812808_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.6e-24	39.9
AVD36403.1\|3812801_3813878_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	2.9e-64	42.8
AVD36404.1\|3813871_3815239_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.2e-49	31.0
AVD36405.1\|3815250_3815949_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	1.5e-45	43.9
AVD36406.1\|3815954_3816431_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.1e-26	45.8
AVD36407.1\|3816880_3817393_+	nitroreductase family protein	A0A1V0E011	Clostridioides_phage	1.7e-83	87.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP026615

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection