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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP026700 Salmonella enterica subsp. enterica serovar Typhimurium strain AR_0031 chromosome, complete genome 0 crisprs cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,RT,DEDDh,DinG,cas14j 0 0 10 0
CP026701 Salmonella enterica subsp. enterica serovar Typhimurium strain AR_0031 plasmid unitig_1_pilon, complete sequence 0 crisprs cas14j 0 0 1 0

Results visualization

1. CP026700
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 66676 : 78967 11 Salmonella_phage(45.45%) holin,tail NA
DBSCAN-SWA_2 419300 : 520764 111 Salmonella_phage(36.07%) portal,protease,integrase,transposase,tail,holin,head,lysis,tRNA,capsid,terminase attL 445444:445459|attR 515853:515868
DBSCAN-SWA_3 2115615 : 2136035 26 Burkholderia_phage(45.0%) plate,tail NA
DBSCAN-SWA_4 3531364 : 3540096 9 Dickeya_phage(14.29%) transposase,protease NA
DBSCAN-SWA_5 3590189 : 3688998 103 Salmonella_phage(44.64%) portal,protease,integrase,tail,lysis,tRNA,holin attL 3593098:3593117|attR 3664886:3664905
DBSCAN-SWA_6 3827445 : 3884559 74 Enterobacteria_phage(32.69%) integrase,transposase,tail,capsid,head,lysis,tRNA,portal,terminase attL 3838173:3838187|attR 3852571:3852585
DBSCAN-SWA_7 4480399 : 4536114 69 Moraxella_phage(11.76%) protease,integrase,transposase,tail,tRNA attL 4524168:4524190|attR 4533883:4533905
DBSCAN-SWA_8 4611564 : 4690908 107 Salmonella_phage(85.07%) portal,protease,integrase,plate,transposase,tail,holin,head,lysis,capsid,terminase attL 4618102:4618117|attR 4692531:4692546
DBSCAN-SWA_9 4776902 : 4787408 10 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_10 4855716 : 4864887 10 Enterobacteria_phage(66.67%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP026701
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 976 : 10272 12 Escherichia_phage(28.57%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage