CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP026675	Pseudomonas sp. SWI36 chromosome, complete genome	1 crisprs	DEDDh,cas3,DinG,csa3,RT,WYL	3	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP026675_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026675_2

3141379-3141639

Orphan

Consensus_repeat	Method
AGCAGGGCCGGCCTCTTCGCGGGTGAACCCGC	CRT

3 spacers

The CRISPR arrays of CP026675_2

>merge|CP026675|2|3141379-3141639|CRT
AGCAGGGCCGGCCTCTTCGCGGGTGAACCCGCGAATACGGTAGTGGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACACGACGGCCTGTGCCTAACCCCCGATGTGTGTCCACCACCAATCTGCGTATTCGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGGTGAACGGCGCGTGGAGATTGGTTAGCAGGGCCGGCCTCTTCGCGGGTGAACCCGC

>CP026675|2|1|3141379-3141639|CRT
AGCAGGGCCGGCCTCTTCGCGGGTGAACCCGC	GAATACGGTAGTGGCGGCAACGGTGAACGGCGGGTGGAGATTGGCC
AGCAGGGCCGGCCTCTTCGCGGGTGAACCCGC	TCCTACACGACGGCCTGTGCCTAACCCCCGATGTGTGTCCA
CCACCAATCTGCGTATTCGCGGGTTTACCCGC	GAATACGGTGGCGGCGGCAACGGTGAACGGCGCGTGGAGATTGGTT
AGCAGGGCCGGCCTCTTCGCGGGTGAACCCGC

Protein	Signature genes	Signature genes Name	Protein_function
CP026675.1\|AVD96317.1\|3133040_3134051_+\|lytic-murein-transglycosylase-B	unknown	unknown	gnl\|CDD\|274066
CP026675.1\|AVD93629.1\|3141959_3142997_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|235511
CP026675.1\|AVD93622.1\|3135272_3136433_+\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224600
CP026675.1\|AVD93624.1\|3136781_3137429_+\|octanoyltransferase	unknown	unknown	gnl\|CDD\|237681
CP026675.1\|AVD93632.1\|3146537_3146852_+\|hypothetical-protein	unknown	unknown	unknown
CP026675.1\|AVD93625.1\|3137431_3138448_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
CP026675.1\|AVD93631.1\|3143703_3146310_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
CP026675.1\|AVD93636.1\|3150285_3150759_-\|endoribonuclease-YbeY	unknown	unknown	gnl\|CDD\|234575
CP026675.1\|AVD93630.1\|3143036_3143642_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225527
CP026675.1\|AVD93621.1\|3134050_3135052_+\|septal-ring-lytic-transglycosylase-RlpA-family-protein	unknown	unknown	gnl\|CDD\|223868
CP026675.1\|AVD93628.1\|3140895_3141060_-\|ribosome-alternative-rescue-factor-ArfA	unknown	unknown	gnl\|CDD\|225578
CP026675.1\|AVD93638.1\|3152006_3152333_+\|DUF1820-domain-containing-protein	unknown	unknown	gnl\|CDD\|370154
CP026675.1\|AVD93626.1\|3138546_3139485_+\|LD-carboxypeptidase	unknown	unknown	gnl\|CDD\|132882
CP026675.1\|AVD93634.1\|3147894_3149412_-\|apolipoprotein-N-acyltransferase	unknown	unknown	gnl\|CDD\|234721
CP026675.1\|AVD93637.1\|3150751_3151750_-\|PhoH-family-protein	unknown	unknown	gnl\|CDD\|224616
CP026675.1\|AVD93627.1\|3139518_3140835_-\|lytic-murein-transglycosylase	unknown	unknown	gnl\|CDD\|372592
CP026675.1\|AVD93623.1\|3136506_3136782_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|166914
CP026675.1\|AVD93633.1\|3146986_3147748_+\|YdcF-family-protein	unknown	unknown	gnl\|CDD\|99750
CP026675.1\|AVD93620.1\|3131877_3133023_+\|rod-shape-determining-protein-RodA	unknown	unknown	gnl\|CDD\|274033
CP026675.1\|AVD93635.1\|3149420_3150260_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|226910

Protein	Function_ID	Function_description	E-value
CP026675.1\|AVD96317.1\|3133040_3134051_+\|lytic-murein-transglycosylase-B	gnl\|CDD\|274066	TIGR02282, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase B. This family consists of lytic murein transglycosylases (murein hydrolases) in the family of MltB, which is a membrane-bound lipoprotein in Escherichia coli. The N-terminal lipoprotein modification motif is conserved in about half the members of this family. The term Slt35 describes a naturally occurring soluble fragment of MltB. Members of this family never contain the putative peptidoglycan binding domain described by pfam01471, which is associated with several classes of bacterial cell wall lytic enzymes. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	3.57434e-140
CP026675.1\|AVD93629.1\|3141959_3142997_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	5.61315e-144
CP026675.1\|AVD93622.1\|3135272_3136433_+\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	2.57126e-158
CP026675.1\|AVD93624.1\|3136781_3137429_+\|octanoyltransferase	gnl\|CDD\|237681	PRK14342, PRK14342, lipoyl(octanoyl) transferase LipB.	1.37349e-149
CP026675.1\|AVD93625.1\|3137431_3138448_+\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
CP026675.1\|AVD93631.1\|3143703_3146310_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
CP026675.1\|AVD93636.1\|3150285_3150759_-\|endoribonuclease-YbeY	gnl\|CDD\|234575	PRK00016, PRK00016, metal-binding heat shock protein; Provisional.	3.9022e-62
CP026675.1\|AVD93630.1\|3143036_3143642_-\|hypothetical-protein	gnl\|CDD\|225527	COG2980, RlpB, Rare lipoprotein B [Cell envelope biogenesis, outer membrane].	2.75386e-29
CP026675.1\|AVD93621.1\|3134050_3135052_+\|septal-ring-lytic-transglycosylase-RlpA-family-protein	gnl\|CDD\|223868	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane].	1.86194e-60
CP026675.1\|AVD93628.1\|3140895_3141060_-\|ribosome-alternative-rescue-factor-ArfA	gnl\|CDD\|225578	COG3036, COG3036, Uncharacterized protein conserved in bacteria [Function unknown].	3.09849e-09
CP026675.1\|AVD93638.1\|3152006_3152333_+\|DUF1820-domain-containing-protein	gnl\|CDD\|370154	pfam08850, DUF1820, Domain of unknown function (DUF1820). This family includes small functionally uncharacterized proteins around 100 amino acids in length.	2.51887e-58
CP026675.1\|AVD93626.1\|3138546_3139485_+\|LD-carboxypeptidase	gnl\|CDD\|132882	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment of preformed D-Ala-D-Ala dipeptides. Some enzymes possessing LD-carboxypeptidase activity also act as LD-transpeptidase by replacing the terminal D-Ala with another D-amino acid. MccF contributes to self-immunity towards microcin C7 (MccC7), a ribosomally encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. Its possible biological role is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that MccF is involved in microcin degradation or sequestration in the periplasm.	1.56854e-111
CP026675.1\|AVD93634.1\|3147894_3149412_-\|apolipoprotein-N-acyltransferase	gnl\|CDD\|234721	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed.	0
CP026675.1\|AVD93637.1\|3150751_3151750_-\|PhoH-family-protein	gnl\|CDD\|224616	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms].	2.09148e-159
CP026675.1\|AVD93627.1\|3139518_3140835_-\|lytic-murein-transglycosylase	gnl\|CDD\|372592	pfam13406, SLT_2, Transglycosylase SLT domain. This family is related to the SLT domain pfam01464.	4.74117e-159
CP026675.1\|AVD93623.1\|3136506_3136782_+\|hypothetical-protein	gnl\|CDD\|166914	PRK00341, PRK00341, DUF493 domain-containing protein.	1.09829e-53
CP026675.1\|AVD93633.1\|3146986_3147748_+\|YdcF-family-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	1.68182e-35
CP026675.1\|AVD93620.1\|3131877_3133023_+\|rod-shape-determining-protein-RodA	gnl\|CDD\|274033	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	6.16154e-166
CP026675.1\|AVD93635.1\|3149420_3150260_-\|HlyC/CorC-family-transporter	gnl\|CDD\|226910	COG4535, CorC, Putative Mg2+ and Co2+ transporter CorC [Inorganic ion transport and metabolism].	9.74052e-153

>CP026675.1|AVD93628.1|3140895_3141060_-|ribosome-alternative-rescue-factor-ArfA
MSKKPKKHGPNKAKSIVAQPLFRCRQEQPNKGKGSYRREAFQSRDWEASYFLAA
>CP026675.1|AVD93627.1|3139518_3140835_-|lytic-murein-transglycosylase
MLFRLIPRWETRQLIAASSFILLVACAEKPTAADALPLAPAQPNPVVTVPGATPDVSTDIQPLQTFAQWQAGFREQALQAGISPSTFDRAFLGVTPDLDVIKADRSQPEFTRPVWEYLEGALSPLRVRNGKKLLEQNAELLTRLEQRYGVDRQVLVAVWGMESNFGQFQGSKSVIRSLATLAYEGRRPQFAQDQLIAALQIIQHGDIQPEAMRGSWAGAMGQTQFIPTTYNTHAVDFDGDGRRDIWNSTPDALASTAHYLQSSGWKRGQPWGFEVQVPAGFDFWQADGALRKPVSEWLAMGVKLPAGTQLPAGSNQLSAALLLPAGARGPAFLVLDNFRAILKYNNSSSYALAVSLLGDRFSGWGFIAGSWPKEDLPLSRTERMELQNLLNSRGHDAGNADGIIGANTRKAIRNAQQGLGWPADGYPTHKLLESLRQQ
>CP026675.1|AVD93626.1|3138546_3139485_+|LD-carboxypeptidase
MYCAKTFQSTLPAALPANACFAIVAPAGAARLDAHKVSQWFVDRGYRCHIYPGALQAQGYLAGPDQQRLQDLHAAFADPAMDAILCMRGGYGSMRLLDQLDFELIRRNPKPLIGYSDITALHTAIYRHAGLVTFHGGMLNADLLGAKLPPTESSLLAQLGGHVRAGEQVAHPAGFALDCVLPGVASGPLLGGNLSMLGATMGTLAELDTQGCILFIEDVNEPLYRVDRLLTQLRLAGKLEGVKGVLVGDFAGITTAALTPLLEDTFAPLGVPVLAGWRSGHCDPNVCLPLGARVRLDSVQQTLVLEQDLFRA
>CP026675.1|AVD93625.1|3137431_3138448_+|lipoyl-synthase
MTTVQEAVPNLIPTQDATPRPAPKKVEAGVKLRGADKVARIPVKIIPTDELPKKPDWIRVRIPVSPEVDRIKQLLRKHKLHSVCEEASCPNLGECFSGGTATFMIMGDICTRRCPFCDVGHGRPKPLDLDEPKNLAVAIADLRLKYVVITSVDRDDLRDGGAQHFADCIREIRALSPGVQLETLVPDYRGRMDVALEITAQEPPDVFNHNLETVPRLYKAARPGSDYDWSLDLLQKFKQLVPHVPTKSGLMLGLGETDEEVIEVMHRMREHDIDMLTLGQYLQPSRSHLPVQRFVHPDTFAWFAEEGYKMGFKNVASGPLVRSSYHADQQAHEAKIKL
>CP026675.1|AVD93624.1|3136781_3137429_+|octanoyltransferase
MSACLGFRELGLQPYEPVLEAMRRFTEQRSPDSQDEIWLVEHPAVFTQGQAGKAEHLLVPGDIPVVQTDRGGQVTYHGPGQLVAYLLLDVRRLGFGVRELVSRIELALIDLLASYAVQASAKPDAPGVYVDGAKIASLGLRIRNGRSFHGLALNVDMDLAPFRRINPCGYAGLAMTQLRDLAGPIELDEVRTRLRGQLVKHLDYAEQTTLTGGID
>CP026675.1|AVD93623.1|3136506_3136782_+|hypothetical-protein
MSEPDVKSHKIEFPCDDYPIKVIGDTVVGFKDMVIEVLSKHAKVDLSTLAERQSKEGKYTTVQLHIVAESENQLHDINSALRATGIVKMVL
>CP026675.1|AVD93622.1|3135272_3136433_+|D-alanyl-D-alanine-carboxypeptidase
MNITNLAKRLCLPVLLLITPAAFAAEQMTPAPPQLAAKSYVLMDASSGNVLVENNGDERLPPASLTKLMTAYIATLDIRRGQIGESDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPHPEHYSSAHDMATLARAIINVDPAHYAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVASAVRDGQRLIAVVFGTNSEQSRAAETQKLLTYGFRFFETQTFYQKGTELTQAPVWKGATSQVKAGLADDLTMTMPKGQLKRLQASMTMNPQLTAPIAKGDVIGKVEVKLDEKVIHSADLIALDGVEEGGFFRRMWDSIRLFFYGLFN
>CP026675.1|AVD93621.1|3134050_3135052_+|septal-ring-lytic-transglycosylase-RlpA-family-protein
MRAIISGNAFKLLTCLAVGVALVSCSSNRPAPKSSGNVVRSQPGLDINRAHKDGAPWWDVDVNKIPDATPTVHTGNYKANPYTVLGKTYYPMQDSRNYRAEGTASWYGTKFHGQNTANGELYDLYGMSAAHKTLPLPAYVRVTNLANGRSVILRVNDRGPFYSDRIIDLSYAAAKKLGYAEIGTAHVRVEGIDPQQWWAQRGQTPPMVLKEPQVAQTQAIPASTGRVEQWTPPPQQHAAPVVPVQVGGNNVPGGSGGSFLQVGAFANPDAAELLRAKLSTMVNAPVFISSIVRNQQTLHRVRLGPIGSQGEIQQAQDSIRLANLGQAKLVTAD
>CP026675.1|AVD96317.1|3133040_3134051_+|lytic-murein-transglycosylase-B
MQAVRNWAARCAPWIGAVGLFGAVQLAHAGEYDGSPEVAAFVGEMSRDYGFAPEQLMGVFREVQRKQSILDAISRPAERVKPWKDYRPMFITDARIARGVDFWRQHEAVLARAEQEYGVPAQYIVAIIGVETFFGRNTGNYRVIDALSTLGFDYPPRAEFFRKELREFLLLAREEQLDPLTLKGSYAGAMGLPQFMPSSFRNYAVDFDGDGHINIWNNPDDAIGSVASYFKRHGWVAGEGVVSRAWVEGERADEGLTTGIEPVKTVGELRTLGWSVHDSLRDDLPVTAFRLEGESGPEYWMGLKNFYAITRYNRSVMYAMAVHQLAEQLVQVRGVK
>CP026675.1|AVD93620.1|3131877_3133023_+|rod-shape-determining-protein-RodA
MMNNFDRMLSSEDVMRRRASFLQRIHIDGPLLIILLTLAAGSLFVLYSASGKNWDLLLKQATSFGIGLVSMFVIAQLEPRFMARWVPLAYLAGVLLLVVVDVMGHNAMGATRWINIPGVIRFQPSEFMKIIMPATIAWYLSKRTLPPHLKHVAISLLLIGVPFMLIVRQPDLGTALLILASGAFVLFMGGLRWRWILSVLAAAVPVAVAMWFFVMHDYQKQRVLTFLDPESDPLGTGWNIIQSKAAIGSGGVFGKGWLLGTQSHLDFLPESHTDFIIAVLGEEFGLVGICLLLIVYLLLIGRGLVITAQAQTLFGKLLAGSLTMTFFVYVFVNIGMVSGLLPVVGVPLPFISYGGTSLVTLLSAFGVLMSIHTHRKWIAQV
>CP026675.1|AVD93629.1|3141959_3142997_-|DNA-polymerase-III-subunit-delta
MKLAPAQLNKHLQGALAPVYVVSGDDPLLCQEAADAIRNAARQQGFDERQVFSADANFDWGTLLQAGASLSLFAQRRLLELRLPSGKPGDKGAAALMEYCANPAEDTLLLISLPKLDSSAQKTKWGKALIEGAHCQFIQIWPVDVHQLPQWINQRLQQAGLSAQRDAVDLIAARVEGNLLAAAQEIEKLKLLAEGSQITVETVQAAVADSARFDVFGLVDAILNGEAAHALRMLEGLRGEGVEPPVILWALARELRQLAGLAQQFSQGVPLDKAFSQARPPIWDKRRPLVSKALQRLSAQRWAQLLQDAQRIDAQIKGQAEGSPWIGLARLSLLMAGQRLALPPE
>CP026675.1|AVD93630.1|3143036_3143642_-|hypothetical-protein
MIKRNLLVIGLAVMLSACGFQLRGTGATELSVKEMDVSARNAYGPTVLQLREVLERSGVNVHAGAPYRLVLTNEQERERSATYNSGNRTAEYELTTKLDYSILGLNNLELMSDKLEVRKVYVRDGSNITGSEQEAKRAREEMRRDLVNAMVVRLQMLSPSQLDELQRKADERAQAEAAALEAARRQQAETPQQSPLEVPGN
>CP026675.1|AVD93631.1|3143703_3146310_-|leucine--tRNA-ligase
MHEQYTPRDIEAAAQKFWDEQQSFAVTEQPGKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAAMKNNVAPAKWTYENIDYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIYRKNGTVNWDPADQTVLANEQVIDGRGWRSGALIEKREIPMYYFRITDYADELLESLDELPGWPEQVKTMQRNWIGKSRGMEVQFPYDQASIGHEGTLKVFTTRPDTLMGATYVAVAAEHPLATQAAQGNPALQAFIDECKSGSVAEADMATQEKKGMATSLLVEHPLTGEKLPVWVANYVLMHYGDGAVMAVPAHDERDFEFAHKYNLPVKAVVRTSAGDEVGSEWQAAYGEHGQLINSAEFDGLDFAGAFDAIEAALIRKELGKSRTQFRLRDWGISRQRYWGCPIPIIHCPSCGDVPVPEDQLPVTLPENVVPDGAGSPLARMPEFYECSCPKCGTPAKRETDTMDTFVESSWYFARYASPNYDKGLVDPKAANHWLPVDQYIGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVVAETYYRVASNGGKDWFNPADVEIERDAKAKIIGARLKTDGLPVEIGGTEKMSKSKNNGVDPQSMIEAYGADTCRLFMMFASPPDMSLEWSDSGVEGASRFLRRVWRLAQAHVSQGLPGKLDVAALDDAQKVIRRAIHAAIKQASTDVGQFHKFNTAIAQVMTVMNVLEKAPQATEQDRALLQEGLEAVTLLLAPITPHISHALWQHLGHAGSVIDAAWPSVDEQALVQDSITLVVQVNGKLRGQVEMPAAASREEVEGAARSNENVLRFIDGLTIRKVIVVPGKLVNIVAN
>CP026675.1|AVD93632.1|3146537_3146852_+|hypothetical-protein
MGETQLPAIRPELYERLIDRLGLALETARTSVRLRDEMPAELELRGLSHAEFEVIKAYLESLPERHNAPVGSYPQAEPTSAKIIWLKDKKRPASTARSRTLPHR
>CP026675.1|AVD93633.1|3146986_3147748_+|YdcF-family-protein
MPIRFFIKQWLMPPGVLFLLLLAAWWLRTRRPRLAALCFTVGLGGLWLMSLPLVVQETARVLESEPPLAVSDWAGLASRADAIVVLGAGRERGDPAWGGGDQPTATALERMRFAARLAKASGLPVLTSGGLHYGTPPSEARLMAERLHEDFAVEVKWREEASRTTWENAQLTAKVLQPLGFRRVVLVTQAWHMQRSRWSFEQAGFEVVPAPVGFLGRDHARPFGGLLPESRAMWQSGQLFNEVVGLVGYRVFY
>CP026675.1|AVD93634.1|3147894_3149412_-|apolipoprotein-N-acyltransferase
MRWITRPGWPGNLLALAAGASTLLALAPFDIWPLAVLSIAVLYLGLRELSPRQAMWRGWWFGFGLYGAGTWWIYVSMNTYGGASPLLAIVLLLVFFAALAWFFALPTWLWARWLRRNEAPLADALCFAALWLLQEAFRGWFLTGFPWLYAGYSQLDGPLAGLAPLGGVWLISFSLALTAALLCNLHRLRTRPSFLAVASVLLLAPWVLGLALKGHAWTIPAGDPLKVAAIQGNVEQDLKWDPAHIDAQLALYRDLSFSSRPVDLLVWPETAVPVLKDQAQGYIDVMGRFAAERHSALITGVPVREEVHHQRRYYNGITVTGEGDGTYLKQKLVPFGEYVPLQDVLRGAIEFFNLPMSDFARGPEDQPLLQAKGYQIAPYICYEVVYPEFAAGLAARSDLLLTISNDTWFGKSIGPLQHLQMAQMRALEAGRWMIRATNNGVTALIDPFGRITTQIPQFQQAVLYGEVVPMQQLTPYLQWRSWPLAIVCALLLGWALLAGRIAKTV
>CP026675.1|AVD93635.1|3149420_3150260_-|HlyC/CorC-family-transporter
MSEDRSSNGQKSWLGKLTQAFAHEPKNRQELLELLREAHQNKLLDSEALTIVEGAIQVADLQVRDIMVPRSQMNSIKAGQSPREFLPAVIDAAHSRYPVIGESHDDVLGILLAKDLLPLILKENGDSFNIKDLLRPATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGDIEDEHDVEEDSYIKPLPSGDFLVKALTPIENFNEFFDSEFSDDEFDTVGGLVMSAFGHLPKRNETTEIGSYKFRILNADSRRIHLLRLTPITR
>CP026675.1|AVD93636.1|3150285_3150759_-|endoribonuclease-YbeY
MLELDIQRATDAATPEDAALRRWCELALRQRSADSEMTIRLVDEAEGRELNHTYRHKDYATNVLSFPADVPDDLLDIPLLGDLVICVAVVEREAAEQGKSLEAHWAHLVIHGCLHLLGYDHIEDEEAEEMESLERELLAELGHPDPYADDETDTITH
>CP026675.1|AVD93637.1|3150751_3151750_-|PhoH-family-protein
MNAPIEPHRFILEPFEAHRFANLCGQFDEHLRLIEQRLAIEIRNRGNQFELIGEPRTTSAAEQLLRRLYRETKATDLSPETVHLYLQESAVENIDNPAVNEVSVSLRTRKGNIRPRGLNQQRYVKEILANDINFGIGPAGTGKTYLAVACAVDALEREQVRRILLVRPAVEAGEKLGFLPGDLAQKIDPYLRPLYDALYEMLGFEHVAKLIERQVIEIAPLAYMRGRTLNNSFIILDESQNTTLEQMKMFLTRIGFGSTAVITGDITQVDLPRGTKSGLAHVIEVLKDVPGISFTHFQPKDVVRHPLVQRIVEAYDRFEARQPKPEAPGKDA
>CP026675.1|AVD93638.1|3152006_3152333_+|DUF1820-domain-containing-protein
MSKREPAIYKVIFLNQGQVFEMYAKQIYQSDLWGFLEIEEFVFGERSQLVVDPSEEKLKSQFDGVVRSFVPVHSIVRIDEVERLGTAKISEAKGGGNVMPFPMPMPEK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	3452913-3452958	0	1.0
CP026675_2	2.3\|3141562\|46\|CP026675\|CRT	3141562-3141607	46	CP026675.1	3141182-3141227	0	1.0
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	856679-856724	1	0.978
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	1982608-1982653	1	0.978
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	1983519-1983564	1	0.978
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	3084206-3084251	1	0.978
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	3147810-3147855	1	0.978
CP026675_2	2.3\|3141562\|46\|CP026675\|CRT	3141562-3141607	46	CP026675.1	3141714-3141759	1	0.978
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	58818-58863	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	335101-335146	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	848549-848594	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	856236-856281	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	856381-856426	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	856530-856575	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	1038771-1038816	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	1038923-1038968	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	1981016-1981061	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	1982762-1982807	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	1982916-1982961	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	1983070-1983115	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	1983217-1983262	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	1983371-1983416	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	2340129-2340174	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	2340263-2340308	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	2736970-2737015	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	2878686-2878731	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	2880379-2880424	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	3084357-3084402	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	4194004-4194049	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	4308583-4308628	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	4652990-4653035	2	0.957
CP026675_2	2.1\|3141411\|46\|CP026675\|CRT	3141411-3141456	46	CP026675.1	5896297-5896342	2	0.957
CP026675_2	2.2\|3141489\|41\|CP026675\|CRT	3141489-3141529	41	CP026675.1	3018443-3018483	2	0.951
CP026675_2	2.2\|3141489\|41\|CP026675\|CRT	3141489-3141529	41	CP026675.1	3141260-3141300	2	0.951
CP026675_2	2.2\|3141489\|41\|CP026675\|CRT	3141489-3141529	41	CP026675.1	3141640-3141680	2	0.951

1. spacer 2.1|3141411|46|CP026675|CRT matches to position: 3452913-3452958, mismatch: 0, identity: 1.0

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	Protospacer
**********************************************

2. spacer 2.3|3141562|46|CP026675|CRT matches to position: 3141182-3141227, mismatch: 0, identity: 1.0

gaatacggtggcggcggcaacggtgaacggcgcgtggagattggtt	CRISPR spacer
gaatacggtggcggcggcaacggtgaacggcgcgtggagattggtt	Protospacer
**********************************************

3. spacer 2.1|3141411|46|CP026675|CRT matches to position: 856679-856724, mismatch: 1, identity: 0.978

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcggcaacggtgaacggcgggtggagattggcc	Protospacer
***********.**********************************

4. spacer 2.1|3141411|46|CP026675|CRT matches to position: 1982608-1982653, mismatch: 1, identity: 0.978

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtggtggcggcaacggtgaacggcgggtggagattggcc	Protospacer
*********.************************************

5. spacer 2.1|3141411|46|CP026675|CRT matches to position: 1983519-1983564, mismatch: 1, identity: 0.978

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcggcaacggtgaacggcgggtggagattggcc	Protospacer
***********.**********************************

6. spacer 2.1|3141411|46|CP026675|CRT matches to position: 3084206-3084251, mismatch: 1, identity: 0.978

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcggcaacggtgaacggcgggtggagattggcc	Protospacer
***********.**********************************

7. spacer 2.1|3141411|46|CP026675|CRT matches to position: 3147810-3147855, mismatch: 1, identity: 0.978

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagtcgcggcaacggtgaacggcgggtggagattggcc	Protospacer
************ *********************************

8. spacer 2.3|3141562|46|CP026675|CRT matches to position: 3141714-3141759, mismatch: 1, identity: 0.978

gaatacggtggcggcggcaacggtgaacggcgcgtggagattggtt	CRISPR spacer
gaatacggtggcggcagcaacggtgaacggcgcgtggagattggtt	Protospacer
***************.******************************

9. spacer 2.1|3141411|46|CP026675|CRT matches to position: 58818-58863, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtggcggcggcaacggtgaacggcgggtggagattggcc	Protospacer
*********.*.**********************************

10. spacer 2.1|3141411|46|CP026675|CRT matches to position: 335101-335146, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcggcaacggtgaacagcgggtggagattggcc	Protospacer
***********.****************.*****************

11. spacer 2.1|3141411|46|CP026675|CRT matches to position: 848549-848594, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcggcaacggtgagcggcgggtggagattggcc	Protospacer
***********.**************.*******************

12. spacer 2.1|3141411|46|CP026675|CRT matches to position: 856236-856281, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcggcaacggtgaacggcggatggagattggcc	Protospacer
***********.*********************.************

13. spacer 2.1|3141411|46|CP026675|CRT matches to position: 856381-856426, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcggcaacggtgaacggcgggtggaaattggcc	Protospacer
***********.**************************.*******

14. spacer 2.1|3141411|46|CP026675|CRT matches to position: 856530-856575, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcggcaacggtgaacggcggatggagattggcc	Protospacer
***********.*********************.************

15. spacer 2.1|3141411|46|CP026675|CRT matches to position: 1038771-1038816, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtaccggcggcaacggtgaacggcgggtggagattggcc	Protospacer
********** .**********************************

16. spacer 2.1|3141411|46|CP026675|CRT matches to position: 1038923-1038968, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcggcaacggtgaacggcgggtggaaattggcc	Protospacer
***********.**************************.*******

17. spacer 2.1|3141411|46|CP026675|CRT matches to position: 1981016-1981061, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatgcggtggtggcggcaacggtgaacggcgggtggagattggcc	Protospacer
****.****.************************************

18. spacer 2.1|3141411|46|CP026675|CRT matches to position: 1982762-1982807, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtggcggcggcaacggtgaacggcgggtggagattggcc	Protospacer
*********.*.**********************************

19. spacer 2.1|3141411|46|CP026675|CRT matches to position: 1982916-1982961, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtggcggcggcaacggtgaacggcgggtggagattggcc	Protospacer
*********.*.**********************************

20. spacer 2.1|3141411|46|CP026675|CRT matches to position: 1983070-1983115, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcgccggcaacggtgaacggcgggtggagattggcc	Protospacer
***********.* ********************************

21. spacer 2.1|3141411|46|CP026675|CRT matches to position: 1983217-1983262, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtggcggcggcaacggtgaacggcgggtggagattggcc	Protospacer
*********.*.**********************************

22. spacer 2.1|3141411|46|CP026675|CRT matches to position: 1983371-1983416, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtggcggcggcaacggtgaacggcgggtggagattggcc	Protospacer
*********.*.**********************************

23. spacer 2.1|3141411|46|CP026675|CRT matches to position: 2340129-2340174, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcggcaacggtgaacggcgggttgagattggcc	Protospacer
***********.*********************** **********

24. spacer 2.1|3141411|46|CP026675|CRT matches to position: 2340263-2340308, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcggcaacggtgagcggcgggtggagattggcc	Protospacer
***********.**************.*******************

25. spacer 2.1|3141411|46|CP026675|CRT matches to position: 2736970-2737015, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcggcaacggtgaacggcgggtggaaattggcc	Protospacer
***********.**************************.*******

26. spacer 2.1|3141411|46|CP026675|CRT matches to position: 2878686-2878731, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtggtgccggcaacggtgaacggcgggtggagattggcc	Protospacer
*********.*** ********************************

27. spacer 2.1|3141411|46|CP026675|CRT matches to position: 2880379-2880424, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtggtgccggcaacggtgaacggcgggtggagattggcc	Protospacer
*********.*** ********************************

28. spacer 2.1|3141411|46|CP026675|CRT matches to position: 3084357-3084402, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcggcatcggtgaacggcgggtggagattggcc	Protospacer
***********.******* **************************

29. spacer 2.1|3141411|46|CP026675|CRT matches to position: 4194004-4194049, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtggcggcggcaacggtgaacggcgggtggagattggcc	Protospacer
*********.*.**********************************

30. spacer 2.1|3141411|46|CP026675|CRT matches to position: 4308583-4308628, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagcggcagcaacggtgaacggcgggtggagattggcc	Protospacer
***********.***.******************************

31. spacer 2.1|3141411|46|CP026675|CRT matches to position: 4652990-4653035, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtggcggcggcaacggtgaacggcgggtggagattggcc	Protospacer
*********.*.**********************************

32. spacer 2.1|3141411|46|CP026675|CRT matches to position: 5896297-5896342, mismatch: 2, identity: 0.957

gaatacggtagtggcggcaacggtgaacggcgggtggagattggcc	CRISPR spacer
gaatacggtagtggcggcaacggtgaactgcgggtggaaattggcc	Protospacer
**************************** *********.*******

33. spacer 2.2|3141489|41|CP026675|CRT matches to position: 3018443-3018483, mismatch: 2, identity: 0.951

tcctacacgacggcctgtgcctaacccccgatgtgtgtcca	CRISPR spacer
tcctacacggcggcctgtgcccaacccccgatgtgtgtcca	Protospacer
*********.***********.*******************

34. spacer 2.2|3141489|41|CP026675|CRT matches to position: 3141260-3141300, mismatch: 2, identity: 0.951

tcctacacgacggcctgtgcctaacccccgatgtgtgtcca	CRISPR spacer
tcctacacgacggcctgtgtccaacccccgatgtgtgtcca	Protospacer
*******************.*.*******************

35. spacer 2.2|3141489|41|CP026675|CRT matches to position: 3141640-3141680, mismatch: 2, identity: 0.951

tcctacacgacggcctgtgcctaacccccgatgtgtgtcca	CRISPR spacer
tcctacacgacggcctgtgtccaacccccgatgtgtgtcca	Protospacer
*******************.*.*******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

129580 : 136362

uncultured_Caudovirales_phage(85.71%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVD91064.1\|129580_129874_-	hypothetical protein	A0A2H4JER5	uncultured_Caudovirales_phage	2.8e-33	67.0
AVD91065.1\|130185_130680_-	DUF2514 domain-containing protein	A0A2H4J3Q6	uncultured_Caudovirales_phage	6.9e-37	59.1
AVD91066.1\|130676_131126_-	structural protein P5	A0A2R3UAM8	Myoviridae_environmental_samples	1.0e-31	52.7
AVD91067.1\|131122_131353_-	hypothetical protein	NA	NA	NA	NA
AVD91068.1\|131415_131871_-	hypothetical protein	A0A2H4J9Z7	uncultured_Caudovirales_phage	5.1e-18	56.3
AVD91069.1\|131884_132388_-	hypothetical protein	A0A2H4J2B7	uncultured_Caudovirales_phage	1.1e-16	61.2
AVD91070.1\|132397_133453_-	hypothetical protein	A0A2H4JA10	uncultured_Caudovirales_phage	1.4e-140	67.5
AVD96222.1\|133452_136362_-	hypothetical protein	A0A2H4J0B1	uncultured_Caudovirales_phage	3.7e-45	43.3

DBSCAN-SWA_2

141047 : 185922

uncultured_Caudovirales_phage(48.84%)

holin,head,terminase,capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVD91071.1\|141047_141446_-	hypothetical protein	A0A2H4IYI8	uncultured_Caudovirales_phage	1.1e-69	90.9
AVD91072.1\|141448_142051_-	hypothetical protein	A0A2H4J0R3	uncultured_Caudovirales_phage	5.0e-114	99.0
AVD91073.1\|142050_142635_-	hypothetical protein	A0A2H4IYI9	uncultured_Caudovirales_phage	8.9e-92	84.0
AVD91074.1\|142651_145375_-\|tail	phage tail tape measure protein	A0A2H4J7J3	uncultured_Caudovirales_phage	0.0e+00	86.6
AVD91075.1\|145431_145737_-	hypothetical protein	A0A2H4J0E0	uncultured_Caudovirales_phage	7.5e-50	96.0
AVD96223.1\|145877_146720_-	phage repressor protein	A0A2H4J0P1	uncultured_Caudovirales_phage	2.0e-31	40.1
AVD91076.1\|146790_146958_-	hypothetical protein	NA	NA	NA	NA
AVD91077.1\|146960_147509_+	hypothetical protein	A0A2H4JA00	uncultured_Caudovirales_phage	1.4e-30	45.8
AVD91078.1\|147617_148307_+	hypothetical protein	NA	NA	NA	NA
AVD91079.1\|148485_148872_+	addiction module antidote protein, HigA family	NA	NA	NA	NA
AVD91080.1\|149245_149674_-	hypothetical protein	NA	NA	NA	NA
AVD91081.1\|149773_150166_-	hypothetical protein	NA	NA	NA	NA
AVD91082.1\|150355_150655_+	hypothetical protein	NA	NA	NA	NA
AVD91083.1\|150738_151155_-	hypothetical protein	NA	NA	NA	NA
AVD91084.1\|151151_151628_-	toxin	NA	NA	NA	NA
AVD91085.1\|151861_152107_+	protein L	NA	NA	NA	NA
AVD91086.1\|152195_152384_+	hypothetical protein	NA	NA	NA	NA
AVD91087.1\|152635_152932_-	hypothetical protein	A0A2H4JBP7	uncultured_Caudovirales_phage	2.3e-43	85.6
AVD91088.1\|152949_153333_-	hypothetical protein	A0A2H4IYQ5	uncultured_Caudovirales_phage	4.0e-56	84.3
AVD91089.1\|153342_154002_-\|tail	phage tail protein	A0A2H4J591	uncultured_Caudovirales_phage	3.7e-86	71.9
AVD91090.1\|154070_154586_-	hypothetical protein	Q7Y5X0	Haemophilus_phage	1.3e-22	46.5
AVD91091.1\|154690_155104_-	hypothetical protein	A0A2H4J5P1	uncultured_Caudovirales_phage	1.3e-65	91.2
AVD91092.1\|155100_155775_-	hypothetical protein	A0A2H4J0Q3	uncultured_Caudovirales_phage	1.5e-111	91.1
AVD91093.1\|155776_156169_-	hypothetical protein	A0A2H4IZB5	uncultured_Caudovirales_phage	3.8e-54	79.2
AVD91094.1\|156171_156564_-	protein singed	A0A0S2SYB7	Pseudomonas_phage	2.0e-18	47.5
AVD91095.1\|156603_157200_-	hypothetical protein	A0A1B0VMF7	Pseudomonas_phage	1.9e-25	40.4
AVD91096.1\|157248_158193_-\|capsid	phage capsid protein	A0A1B0VMF8	Pseudomonas_phage	1.9e-115	65.8
AVD91097.1\|158203_158923_-	hypothetical protein	A0A2H4J0Y0	uncultured_Caudovirales_phage	6.3e-39	62.4
AVD91098.1\|158993_159320_-	hypothetical protein	NA	NA	NA	NA
AVD91099.1\|159351_160395_-\|head	phage head morphogenesis protein	A0A1B0VMF3	Pseudomonas_phage	1.3e-45	32.9
AVD91100.1\|160384_161809_-	hypothetical protein	A0A2H4J5M6	uncultured_Caudovirales_phage	6.6e-72	36.3
AVD91101.1\|161817_163305_-\|terminase	terminase	A0A2H4J2I1	uncultured_Caudovirales_phage	9.4e-287	97.3
AVD91102.1\|163364_163907_-	hypothetical protein	G8C7P2	Escherichia_phage	2.2e-20	38.3
AVD91103.1\|163963_164152_-	DUF2158 domain-containing protein	NA	NA	NA	NA
AVD91104.1\|164222_164414_-	hypothetical protein	NA	NA	NA	NA
AVD91105.1\|164474_164945_-	hypothetical protein	NA	NA	NA	NA
AVD91106.1\|165074_165410_-\|holin	phage holin, lambda family	A0A1W6JTC7	Pseudomonas_phage	6.3e-34	67.0
AVD91107.1\|165580_165778_+	mRNA interferase	NA	NA	NA	NA
AVD91108.1\|165808_166234_+	transcriptional regulator	Q7Y3V7	Yersinia_phage	3.7e-31	52.5
AVD91109.1\|166341_167487_-	hypothetical protein	NA	NA	NA	NA
AVD91110.1\|167600_167768_-	Com family DNA-binding transcriptional regulator	B5TK59	Pseudomonas_phage	1.9e-07	63.6
AVD91111.1\|168071_168662_-	hypothetical protein	A0A059VF83	Pseudomonas_phage	2.0e-54	53.1
AVD91112.1\|168777_169383_-	ninG protein	A0A0U1VZM0	Pseudomonas_phage	4.3e-57	57.1
AVD91113.1\|169379_169583_-	hypothetical protein	A0A2H4IY74	uncultured_Caudovirales_phage	1.4e-23	75.0
AVD91114.1\|170199_170415_-	hypothetical protein	NA	NA	NA	NA
AVD91115.1\|170411_171137_-	Replication protein P	A0A2H4J1T4	uncultured_Caudovirales_phage	5.3e-86	72.4
AVD91116.1\|171867_172278_-	hypothetical protein	A0A1Y0SUG1	Pseudomonas_phage	8.1e-07	57.7
AVD91117.1\|172274_173069_-	transporter	A0A2I7RX10	Vibrio_phage	9.4e-52	48.2
AVD91118.1\|173161_173341_-	hypothetical protein	NA	NA	NA	NA
AVD91119.1\|173359_173548_-	hypothetical protein	B5WZX7	Pseudomonas_phage	1.3e-12	62.9
AVD91120.1\|173578_173794_-	XRE family transcriptional regulator	K7PMD5	Enterobacterial_phage	8.0e-14	53.5
AVD91121.1\|173897_174704_+	XRE family transcriptional regulator	A0A2D1GNH0	Pseudomonas_phage	6.6e-61	46.4
AVD91122.1\|174800_175556_+	DNA-binding protein	L7RE44	Acanthamoeba_polyphaga_moumouvirus	3.6e-08	30.8
AVD91123.1\|175632_175959_-	hypothetical protein	A0A2D1GND3	Pseudomonas_phage	5.1e-28	64.8
AVD91124.1\|176886_177153_+	hypothetical protein	NA	NA	NA	NA
AVD91125.1\|177149_177335_+	hypothetical protein	NA	NA	NA	NA
AVD91126.1\|177355_177772_+	hypothetical protein	NA	NA	NA	NA
AVD91127.1\|177768_177972_+	hypothetical protein	NA	NA	NA	NA
AVD91128.1\|177968_178184_+	hypothetical protein	A0A2H4J1S2	uncultured_Caudovirales_phage	6.7e-13	54.2
AVD91129.1\|179604_180366_+	ERF family protein	K4NWX3	Pseudomonas_phage	6.5e-50	55.4
AVD91130.1\|180362_181130_+	recombinase	A0A0M3LPU0	Mannheimia_phage	2.9e-13	28.7
AVD91131.1\|181719_182589_+	hypothetical protein	A0A2H4J418	uncultured_Caudovirales_phage	3.7e-94	55.5
AVD91132.1\|182615_183269_-	hypothetical protein	NA	NA	NA	NA
AVD91133.1\|183350_184022_+	hypothetical protein	NA	NA	NA	NA
AVD91134.1\|184034_184259_-	hypothetical protein	NA	NA	NA	NA
AVD91135.1\|184401_184896_+	hypothetical protein	I2GUG5	Acinetobacter_phage	1.8e-08	31.0
AVD91136.1\|184892_185162_+	hypothetical protein	A0A2H4J399	uncultured_Caudovirales_phage	7.9e-27	69.7
AVD91137.1\|185158_185470_+	hypothetical protein	NA	NA	NA	NA
AVD91138.1\|185466_185922_+	DUF2591 domain-containing protein	A0A1B0VMD7	Pseudomonas_phage	3.8e-13	35.6

DBSCAN-SWA_3

249773 : 260286

uncultured_Caudovirales_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVD91196.1\|249773_250541_-	oxidoreductase	A0A0M4JSW6	Mollivirus	1.7e-05	31.4
AVD91197.1\|251762_252434_+	BAX inhibitor (BI)-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	2.1e-105	91.0
AVD91198.1\|252376_252607_-	hypothetical protein	NA	NA	NA	NA
AVD91199.1\|252597_253977_+	xanthine permease XanP	H9YQ34	environmental_Halophage	1.6e-27	51.1
AVD91200.1\|254074_254467_+	sulfurtransferase TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.1e-53	79.8
AVD91201.1\|254468_254828_+	sulfurtransferase TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	8.6e-37	66.7
AVD91202.1\|254827_255124_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	2.0e-23	58.6
AVD91203.1\|255120_255456_+	sulfurtransferase TusE	A0A2H4J8B6	uncultured_Caudovirales_phage	7.5e-43	75.7
AVD91204.1\|255452_256454_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	5.2e-156	80.5
AVD91205.1\|257613_259005_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
AVD91206.1\|259005_260286_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.6e-96	54.1

DBSCAN-SWA_4

1288963 : 1296742

Planktothrix_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVD92065.1\|1288963_1289773_-	phospholipid ABC transporter ATP-binding protein MlaF	G9BWD6	Planktothrix_phage	7.7e-25	32.5
AVD92066.1\|1290021_1290996_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	1.0e-36	32.8
AVD92067.1\|1291008_1291533_+	phenylphosphate carboxylase subunit delta	A0A140XBD6	Dickeya_phage	6.9e-27	48.1
AVD92068.1\|1291541_1292114_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
AVD92069.1\|1292100_1292625_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
AVD92070.1\|1292625_1293351_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.4e-23	26.5
AVD92071.1\|1293526_1295020_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA
AVD92072.1\|1295099_1295408_+	ribosome hibernation promoting factor	A0A0M7QH33	Escherichia_phage	4.4e-05	34.1
AVD92073.1\|1295420_1295885_+	PTS IIA-like nitrogen-regulatory protein PtsN	NA	NA	NA	NA
AVD92074.1\|1295887_1296742_+	RNase adaptor protein RapZ	A0A0R8VB27	Thermobifida_phage	2.4e-08	31.9

DBSCAN-SWA_5

5290242 : 5299162

Pseudomonas_phage(30.0%)

integrase

attL 5287872:5287886|attR 5296442:5296456

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5287872:5287886	attL	NA	NA	NA	NA
AVD95467.1\|5290242_5291829_-	ABC-F family ATPase	A0A2K9L0W2	Tupanvirus	5.5e-59	27.8
AVD95468.1\|5291849_5293043_-\|integrase	site-specific integrase	J7HXC4	Pseudomonas_phage	5.6e-125	58.6
AVD95469.1\|5293255_5293753_-	hypothetical protein	A0A1B0VM52	Pseudomonas_phage	7.2e-34	50.3
AVD96388.1\|5293806_5294709_-	phosphohydrolase	A0A1V0E8C5	Vibrio_phage	2.1e-68	46.4
AVD95470.1\|5294799_5294985_+	hypothetical protein	NA	NA	NA	NA
AVD95471.1\|5295001_5295232_-	hypothetical protein	NA	NA	NA	NA
AVD96389.1\|5295266_5295605_-	hypothetical protein	NA	NA	NA	NA
AVD95472.1\|5295640_5296036_-	DUF2591 domain-containing protein	A0A1B0VMD7	Pseudomonas_phage	7.3e-13	37.1
AVD95473.1\|5296032_5296356_-	hypothetical protein	A0A2H4J0N7	uncultured_Caudovirales_phage	5.9e-53	91.6
AVD95474.1\|5296352_5296640_-	hypothetical protein	A0A2H4J399	uncultured_Caudovirales_phage	9.0e-37	91.4
5296442:5296456	attR	NA	NA	NA	NA
AVD95475.1\|5296775_5297345_-	hypothetical protein	A0A2H4J418	uncultured_Caudovirales_phage	1.4e-86	74.5
AVD95476.1\|5297469_5297898_+	peptidase S24	A0A1L5C2A3	Pseudoalteromonas_phage	2.3e-12	43.2
AVD95477.1\|5297887_5299162_+	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.6e-106	47.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage