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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP026743 Lactobacillus plantarum strain KC28 chromosome, complete genome 1 crisprs DinG,DEDDh,cas3,csa3,WYL 0 0 9 0

Results visualization

1. CP026743
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP026743_2 2212338-2212423 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1128 : 35050 52 Lactobacillus_phage(54.17%) tail,integrase,terminase,holin,capsid,portal attL 783:842|attR 42280:42625
DBSCAN-SWA_2 45049 : 51643 9 Lactobacillus_phage(83.33%) holin NA
DBSCAN-SWA_3 698246 : 708886 10 Lactobacillus_phage(90.0%) transposase NA
DBSCAN-SWA_4 923987 : 961914 50 Lactobacillus_phage(62.5%) head,tail,integrase,holin,capsid,plate,portal attL 923186:923199|attR 928517:928530
DBSCAN-SWA_5 1085758 : 1111499 22 Lactobacillus_phage(83.33%) head,tail,integrase,terminase,holin,capsid,portal attL 1083806:1083821|attR 1094277:1094292
DBSCAN-SWA_6 1624722 : 1673107 61 Lactobacillus_phage(37.5%) tail,terminase,protease,holin,capsid,portal NA
DBSCAN-SWA_7 1866516 : 1875030 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_8 3049617 : 3097555 46 Staphylococcus_virus(33.33%) transposase,bacteriocin,protease NA
DBSCAN-SWA_9 3278957 : 3291812 27 Lactobacillus_phage(73.33%) terminase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage