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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP026752 Klebsiella pneumoniae strain AR_0066 plasmid tig00000080_pilon, complete sequence 0 crisprs csa3,RT,cas3 0 0 2 0
CP026753 Klebsiella pneumoniae strain AR_0066 plasmid tig00000084_pilon, complete sequence 0 crisprs RT 0 0 1 0
CP026751 Klebsiella pneumoniae strain AR_0066 chromosome, complete genome 0 crisprs cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,DEDDh,cas3,RT,csa3,DinG,WYL,TnsE_C 0 0 11 0

Results visualization

1. CP026752
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1686 : 47990 39 Escherichia_phage(25.0%) transposase,protease,integrase attL 9684:9697|attR 19914:19927
DBSCAN-SWA_2 85447 : 93375 7 Stx2-converting_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP026753
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 6275 : 47430 51 Escherichia_phage(31.58%) transposase,integrase attL 4472:4531|attR 42372:42487
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP026751
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 563122 : 574009 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_2 740364 : 798245 55 Escherichia_phage(37.5%) transposase,plate,tRNA,protease NA
DBSCAN-SWA_3 972070 : 984677 16 Enterobacteria_phage(62.5%) tail,tRNA NA
DBSCAN-SWA_4 988521 : 1017235 37 Enterobacteria_phage(54.17%) integrase,plate,terminase,tail,capsid,portal attL 977294:977315|attR 1013500:1013521
DBSCAN-SWA_5 1313887 : 1323350 9 Brazilian_cedratvirus(16.67%) protease,tRNA NA
DBSCAN-SWA_6 3762636 : 3821150 70 Salmonella_phage(74.42%) integrase,plate,transposase,capsid,portal,tail,head,tRNA attL 3757425:3757441|attR 3826370:3826386
DBSCAN-SWA_7 4386940 : 4434108 64 Salmonella_phage(26.53%) holin,coat,tail,terminase NA
DBSCAN-SWA_8 4500350 : 4515072 17 Morganella_phage(50.0%) tail,integrase attL 4500103:4500123|attR 4520167:4520187
DBSCAN-SWA_9 4612449 : 4699792 101 Klebsiella_phage(43.33%) holin,terminase,transposase,capsid,portal,tail,protease,head,tRNA NA
DBSCAN-SWA_10 4897663 : 4904568 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_11 5126167 : 5186078 81 Cronobacter_phage(17.24%) coat,terminase,head,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage