CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
CP026696	Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 plasmid pNLP4, complete sequence	0 crisprs	PD-DExK	0	0	0
CP026692	Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 chromosome, complete genome	19 crisprs	cas14j,PD-DExK,cas3,WYL,cas10d,csc2gr7,csc1gr5,2OG_CAS,cas6,cas4,cas1,cas2,DinG,csa3,RT,DEDDh	3	18	2
CP026695	Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 plasmid pNLP3, complete sequence	0 crisprs	Cas9_archaeal	0	0	0
CP026693	Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 plasmid pNLP1, complete sequence	0 crisprs	RT,cas3	0	0	0
CP026694	Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 plasmid pNLP2, complete sequence	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP026692_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_2

106630-106735

Orphan

Consensus_repeat	Method
TTACCCCACCCTAACCCTCCCCTTGGAAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026692_2

>merge|CP026692|2|106630-106735|CRISPRCasFinder
TTACCCCACCCTAACCCTCCCCTTGGAAAGGCTACGGTGTACACACAAGTTATCGAATCACTACAAGTTCTCAAATTACCCCACCCTAACCCTCCCCTTGGAAAGG

>CP026692|2|2|106630-106735|CRISPRCasFinder
TTACCCCACCCTAACCCTCCCCTTGGAAAGG	CTACGGTGTACACACAAGTTATCGAATCACTACAAGTTCTCAAA
TTACCCCACCCTAACCCTCCCCTTGGAAAGG

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH69039.1\|103714_106375_-\|PBS-lyase-HEAT-like-repeat-containing-protein	unknown	unknown	gnl\|CDD\|227922
CP026692.1\|AVH69046.1\|118370_122636_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP026692.1\|AVH69048.1\|125182_126550_-\|FAD-linked-oxidase	unknown	unknown	gnl\|CDD\|223354
CP026692.1\|AVH69035.1\|92213_93293_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS	unknown	unknown	gnl\|CDD\|273374
CP026692.1\|AVH69042.1\|111635_112238_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69032.1\|90737_91121_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226447
CP026692.1\|AVH69044.1\|113976_114933_+\|cell-wall-hydrolase/autolysin	unknown	unknown	gnl\|CDD\|119407
CP026692.1\|AVH69036.1\|93447_94845_-\|cytochrome-c-biogenesis-protein-ResB/Ccs1	unknown	unknown	gnl\|CDD\|214387
CP026692.1\|AVH69041.1\|107858_111548_-\|magnesium-chelatase-subunit-H	unknown	unknown	gnl\|CDD\|215643
CP026692.1\|AVH69033.1\|91280_91682_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69040.1\|106930_107371_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69047.1\|123991_125038_-\|RNA-3'-terminal-phosphate-cyclase	unknown	unknown	gnl\|CDD\|235255
CP026692.1\|AVH69038.1\|96234_102852_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|236848
CP026692.1\|AVH69043.1\|112252_113407_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378355
CP026692.1\|AVH69037.1\|94874_95615_-\|cytochrome-c-biogenesis-protein-CcdA	unknown	unknown	gnl\|CDD\|280792
CP026692.1\|AVH69031.1\|90311_90578_+\|YCII-related-protein	unknown	unknown	gnl\|CDD\|367663
CP026692.1\|AVH69030.1\|89834_90170_+\|KGK-family-protein	unknown	unknown	gnl\|CDD\|370166
CP026692.1\|AVH69034.1\|91762_92176_+\|NADPH-dependent-7-cyano-7-deazaguanine-reductase	unknown	unknown	gnl\|CDD\|237320
CP026692.1\|AVH69045.1\|115535_117758_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|238923
CP026692.1\|AVH69049.1\|126731_127394_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|198397

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH69039.1\|103714_106375_-\|PBS-lyase-HEAT-like-repeat-containing-protein	gnl\|CDD\|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	3.11941e-34
CP026692.1\|AVH69046.1\|118370_122636_-\|histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	8.87658e-58
CP026692.1\|AVH69035.1\|92213_93293_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS	gnl\|CDD\|273374	TIGR00975, precursor_PBP-3_PstS-3_Antigen_Ag88., phosphate ABC transporter, phosphate-binding protein. This family represents one type of (periplasmic, in Gram-negative bacteria) phosphate-binding protein found in phosphate ABC (ATP-binding cassette) transporters. This protein is accompanied, generally in the same operon, by an ATP binding protein and (usually) two permease proteins. [Transport and binding proteins, Anions].	5.61693e-121
CP026692.1\|AVH69044.1\|113976_114933_+\|cell-wall-hydrolase/autolysin	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	2.61386e-47
CP026692.1\|AVH69032.1\|90737_91121_+\|hypothetical-protein	gnl\|CDD\|226447	COG3937, COG3937, Uncharacterized conserved protein [Function unknown].	6.30841e-19
CP026692.1\|AVH69048.1\|125182_126550_-\|FAD-linked-oxidase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	5.96928e-50
CP026692.1\|AVH69036.1\|93447_94845_-\|cytochrome-c-biogenesis-protein-ResB/Ccs1	gnl\|CDD\|214387	CHL00177, ccs1, c-type cytochrome biogenensis protein; Validated.	0
CP026692.1\|AVH69041.1\|107858_111548_-\|magnesium-chelatase-subunit-H	gnl\|CDD\|215643	PLN03241, PLN03241, magnesium chelatase subunit H; Provisional.	0
CP026692.1\|AVH69031.1\|90311_90578_+\|YCII-related-protein	gnl\|CDD\|367663	pfam03795, YCII, YCII-related domain. The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. A strongly conserved histidine and a aspartate suggest that the domain has an enzymatic function. This family also now includes the family formerly known as the DGPF domain (COG3795). Although its function is unknown it is found fused to a sigma-70 factor family domain in CC_1329. Suggesting that this domain plays a role in transcription initiation (Bateman A per. obs.). This domain is named after the most conserved motif in the alignment.	5.0862e-07
CP026692.1\|AVH69047.1\|123991_125038_-\|RNA-3'-terminal-phosphate-cyclase	gnl\|CDD\|235255	PRK04204, PRK04204, RNA 3'-terminal phosphate cyclase.	8.77847e-164
CP026692.1\|AVH69038.1\|96234_102852_-\|histidine-kinase	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	3.43917e-69
CP026692.1\|AVH69037.1\|94874_95615_-\|cytochrome-c-biogenesis-protein-CcdA	gnl\|CDD\|280792	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region. This family consists of the transmembrane (i.e. non-catalytic) region of Cytochrome C biogenesis proteins also known as disulphide interchange proteins. These proteins posses a protein disulphide isomerase like domain that is not found within the aligned region of this family.	2.22293e-46
CP026692.1\|AVH69043.1\|112252_113407_-\|hypothetical-protein	gnl\|CDD\|378355	pfam10017, Methyltransf_33, Histidine-specific methyltransferase, SAM-dependent. The mycobacterial members of this family are expressed from part of the ergothioneine biosynthetic gene cluster. EGTD is the histidine methyltransferase that transfers three methyl groups to the alpha-amino moiety of histidine, in the first stage of the production of this histidine betaine derivative that carries a thiol group attached to the C2 atom of an imidazole ring.	1.03497e-09
CP026692.1\|AVH69030.1\|89834_90170_+\|KGK-family-protein	gnl\|CDD\|370166	pfam08872, KGK, KGK domain. This presumed domain is found in one or two copies in cyanobacterial proteins. It is named after a short sequence motif.	1.81219e-11
CP026692.1\|AVH69034.1\|91762_92176_+\|NADPH-dependent-7-cyano-7-deazaguanine-reductase	gnl\|CDD\|237320	PRK13258, PRK13258, 7-cyano-7-deazaguanine reductase; Provisional.	3.79186e-70
CP026692.1\|AVH69045.1\|115535_117758_-\|histidine-kinase	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	5.05149e-67
CP026692.1\|AVH69049.1\|126731_127394_-\|hypothetical-protein	gnl\|CDD\|198397	cd10450, GIY-YIG_AtGrxS16_like, GIY-YIG domain found in CAXIP1-like proteins, iron-sulfur cluster assembly proteins, and similar proteins. The family includes CAX-interacting protein-1 (CXIP1)-like proteins and iron-sulfur cluster assembly proteins, both of which contain a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC. CAXIP1 is a novel PICOT (protein kinase C-interacting cousin of thioredoxin) domain-containing Arabidopsis protein that activates H+/Ca2+ exchanger CAX1, and its homolog CAX4, but not CAX2 or CAX3. Iron-sulfur cluster assembly proteins in this family also contain a C-terminal NifU-like domain that corresponds to a common region between the NifU protein from nitrogen-fixing bacteria and rhodobacterial species. The biochemical function of NifU is unknown.	4.54126e-31

>CP026692.1|AVH69039.1|103714_106375_-|PBS-lyase-HEAT-like-repeat-containing-protein
MVADHSIDFQTYLESLSEDDTYRDWQDLYTPTDAIDRQRLEPKKSRRRLDLSLMVQTVPQQREGEAPDREKIERLNILEGLLKYAPVHVLLVGRPGSGKSTALERLLWEEAEKCKGAWEQRSRGEAEKLTRIPVLVELRRYKTSVLDLIRDFLTRYNLNLNRIEIENLLFTGRFLLIVDGLNELSNDEARRDLDGFRQKYRRTPMIFTTRYLGVGGDLGIEKKLEMQPLTEAQMQHFVRAYSEVGDEMLRQLAGRLRELAETPLLLWMLCEVFNDAKQIPTSLGELFRWFSGEYHKLKENVPIAEGLPEWEADLLQHLAFVMMQGDNLTELRLTISKQQARNVLAAFLQNKVAFSENCAREWLEDLLKYHLIQLRTDDQIEFRHQLIQEYYAAEFLLQHLDNVSDEKLKRDYLNYLKWTEPVALMLGLVNDERQAVRVVKLALDVDLRLGARLAGEVKREYQAQTVGLVAQLEVDQELKIRLLCITHSDIARLHLRQVLMTNGHEIYCRYILLNAKGESSHNPIFVLNLQKLAGDIEVSITSTEQIPEDGIICNTKINKFQGYTQINSNNSGWSKSFAASEESIRHSAISSLVYKGRPFGYELEDCFWFGVDDSVIERVGIERANYLLFEALVDQSPDIRNCAVSILGLIGNEAAIPTLCQTLEDEDDEVISSSVNALKQIIKPELLTLLSKNLLMTSTCTKELIDGVLTKISQIQEKRGYYNDTIVTSSLSEENPSNNLLNTLNTLNQTLKNMSETPKNDFTGATFGTIVGSVTGNIQGDNIGTQNNYASTKDIAKLETVLEQLLEKMEQDKPTVIDAQPIVAQAVESHPVLKNRQAIEQVIKNNPMLKVRLQRAVTAAGIETVKILFAPAGIAIEAIRAWNEPS
>CP026692.1|AVH69038.1|96234_102852_-|histidine-kinase
MATEQLTRDSDNLDLNQLLRTLNAVKQGDFSARMPIDHTGVAGKIADTLNNIIDQNERMAAELQRIGNVVGKEGKIADRASLGDVRGSWSDCVTSVNTLITDLVQPTAETTRVIRSVANGDLSQTIATEIDGRPLQGEFLQTANIVNTMVDRLGSFASEVTRVAREVGTEGKLGVQAEVQGVAGTWKDLTDNVNLMAGNLTGQVRNIAEVATAIANGDLSKKITVNVKGEILELKNTVNTMVDQLNSFASEVTRVAREVGTEGKLGVQAEVKGVAGTWKDLTDNVNLMAGNLTAQVRNIAEVTTAVANGDLSKKITVDVKGEILELKNTVNIMVDQLNSFASEVTRVAREVGAEGKLGGQAEVRGVAGTWKDLTDSVNFMAGSLTAQVRNIAEVTTAVANGDLSKKITVDVKGEILELKNTINTMVDQLNSFASEVTRVAREVGTEGKLGVQAEVRGVAGTWKDLTDNVNLMAGNLTGQVRNIAEVATAIANGDLSKKITVDVRGEILELKNTINIMVDQLSSFASEVTRVAREVGSEGKLGVQADVRGVAGTWKDLTDSVNFMAGSLTAQVRNIAEVTTAVATGDLSKKITVDVRGEILELKNTINTMVDQLNSFASEVTRVAREVGSEGKLGVQAEVRGVAGTWKDLTDSVNFMAGSLTAQVRNIAEVTTAVANGDLSKKITVDVKGEILELKNTINTMVDQLSSFASEVTRVAREVGTEGKLGVQAEVRGVAGTWKDLTDNVNSMAGNLTDQVRNIAEVATAIANGDLSKKITVAVKGEILELKNTINIMVDQLNSFASEVTRVAREVGSEGKLGVQADVRGVAGTWKDLTDSVNFMAGSLTAQVRNIAAVTTAVANGDLSKKISVDVKGEILELKNTVNTMVDQLNSFASEVTRVAREVGTEGKLGVQAEVKGVAGTWKDLTDSVNFMAGSLTAQVRNIAEVTTAVANGDLSKKITVDVKGEIQELKNTINTMVDQLNSFASEVTRVAREVGTEGKLGVQAYVRGVAGTWKDLTDNVNSMAGNLTGQVRNIAEVTKAVANGDLSKKITVDARGEILDLKNTTNTMVDQLSSFASEVTRVAREVGTEGKLGGQAQVQGVAGTWKDLTDNVNSMAGNLTAQVRGIARVVTAVANGDLKRKLMLDAKGEIETLAETINEMIDTLATFANQVTTVAREVGIEGKLGGQARVPGAAGTWKDLTDNVNELAATLTTQLRSLAEVATAVTKGDLTRSIAVEALGEVAILKDNINQMIANLRETTQKNTEQDWLKTNLAKFTRMLQGQRDLETVSKLILSELAPLVGAQHGVFFLMEYGEHTPYLKLISSYAYRERRHLANRFHLGEGLVGQCALEKERILLTEVPSDYVRISSGLGEATPLNAVVLPVLFEGQVTAVIELASFRRFSEIHLTFFDQLTESIAIVLNTIAASMRTEELLKQSQSLAEELQTQQSELRETNKRLEQQAQSLKTSEDLLKGQQEELQQTNAELEEKAELLAMQKKEVERKNREIEQARVSLEDKAEQLALSSKYKSEFLANMSHELRTPLNSLLILAKLLTDNIDHNLTAKQVEYSQTIYSAGTDLLALINDILDLAKIESGTMSIDMTQMPLAELGEQIERTFRQIAQSKGLAFAIEFTPELPNSISTDVKRIQQVLKNLLSNAFKFTEQGEVRLRIAVAKLGWSNDHQTLNSAEIVIAFSVSDTGIGIAPEKQKVIFEAFQQADGSTSRRYGGTGLGLSISREIARLFGGEIKLISLPGEGSTFTFYLPQFSAELRALSPELTSKPLLTPHSLLSTDAINRVSTHSSLINDDRTTIERGDRVLLIVEDDVNFARILLDMAQQQGFKVIAAQTGSTGLMLAQQFLPSAILLDIRLPEMDGWTVLDRLKHDPNTRHIPVHIMTVEEGRQRGLQLGAIAYLQKPLTSETISEALTKIKGFVERQVKNLLVVEDDDTQRLSIVELIGNSDVLTTAVANGAAALEAIRSQHFDCLVLDLGLPDMTGFELIEQIKLLPNGKTLPIIVYTGREISKAQETELRRIAETIIIKDVRSPERLLDETALFLHRVQANLPEPKRQILEQLHSQDYLLTGKKALIVDDDMRNIFALTSMLERYQIEVIYAENGREGINLLENTPDIDVVLMDVMMPEMDGYETTRVIRQNDRFKSLPIIALTAKAMLGDREKCIEAGASDYITKPVDTEQLLSLLRVWLYR
>CP026692.1|AVH69037.1|94874_95615_-|cytochrome-c-biogenesis-protein-CcdA
MFDNLQTQIYQLEQFANSLVSNQLTHLSVVSIGIIFAAGLLTSLTPCMLSMLPITIGYIGGYEAKSRLQAAAQSTWFALGLATTLAGLGILAGFVGKVYGQVGIGLPIIVSIIAILMGLNLLEALPLQFPSLGETNWISPDLPAGLRSYLLGLTFGLVASPCSTPVLASLLGWIANTQDLILGAILLLSYTAGYVAPLILAGTFTASIKKLLELRRWSGWINPVSGALLVGFGVFSLISRIPLGSF
>CP026692.1|AVH69036.1|93447_94845_-|cytochrome-c-biogenesis-protein-ResB/Ccs1
MTIDDSASKELKWWAIPGQFLRQELLPVLTNLRLAIALLLLIAIFSSTGTVIEQGQSPAFYQANYPEHPALFGFLTWKVIQVVGLDHVYRTWWFLALLILFGTSLTACSFTRQLPALKAAQRWKYYEEPRQFQKLALSTELDTGSLNYLSEILQKHRYKIFPNQEKENLLYARKGIVGRIGPIIVHIGIVAILLGGIWGAMTGFLAQEMVASGDTFQVTNIVDAGPLAAKIPKDWSVRVNRFWIDYTPSGGINQFYSDMSVLNNQGKEIDHKKIFVNEPLRYHGITFYQTDWGIAGVRVQFNNSPIFQLPMAQLNTNGNGRIWGTWVPTKPDLSEGVSLLAKDLQGMVLVYDVTGKLVDTVRAGMFTEVNGVKLKILDVIGSTGLQIKADPGIPIVYTGFGLLMLGVVMSYFSHSQIWALQKGDRLYVGGKTNRAQVAFEQEVLEILDRLSSQPKGEEKETAIEV
>CP026692.1|AVH69035.1|92213_93293_-|phosphate-ABC-transporter-substrate-binding-protein-PstS
MSAKLQSKGRVCLLPLIAILLSIASCAAEQKNIKRVSLIGTGASFPAPLYEHWLSDYNQQNPNVEINYQAIGSSAGVQQLIDGTVDFAASDVGITSEQAAKIKRGVIALPITAGSIVLAYNLTSVAQQSPQVNVPTALKLPRQVYVDIFLGKITNWNHPRIAAANPGVSLPDLPIQVVHRTDGSGTTSVLTQHLSTISPEWKSKIGAGKSVAWRVGIGGKGNEGVTALIQQIPGAIGYVEYIYAKQNKLPVAALENKSGNYITPTPKSVAQTLEAVKLPDDNLIAFITDPIDAQSYPIVTYSWLLTYHQYPNRVKAQALKNFIDWAVIDGQKSSLELGYIPLSKKVVLQVQSAVKKIAE
>CP026692.1|AVH69034.1|91762_92176_+|NADPH-dependent-7-cyano-7-deazaguanine-reductase
MTTDKLSESPSQTSQEMKYGERDIAEGKLITFPNPRVGRRYDINITLPEFTCKCPFSGYPDFATIYVSYVPDERVVELKALKLYINSYRDRYISHEESANQILDDFVAACDPLEVTVKADFTPRGNVHTVVEVRHQK
>CP026692.1|AVH69033.1|91280_91682_+|hypothetical-protein
MEQWQKDLVEIVETVADEVERFFLGMSEVVDAFFELTEEVSEQVHNNIVTEVDQYLQDLAEPMLEAYWELEDIVADVDPGFPYSVEPTSEKNPACIGCSHYHGQVYGGNLLVCAMHPHGCEDENCPDWEKEEY
>CP026692.1|AVH69032.1|90737_91121_+|hypothetical-protein
MPGFGDIVQKAFYLGVGLASYAGEKAGGKLAEVRSQVQKLADEMVAKGEMNTEEARRFVEDMMKQAQQAQPSGVASEKTPPSQPRRIEILEEDEEPTVKEASNDENVDKLRQEVLNLQDELKRLQRD
>CP026692.1|AVH69031.1|90311_90578_+|YCII-related-protein
MPWFVKIEEGKVDKPTFDQYVPAHKAYIQNLIAKGHKARTGYWAEQRGGMLLFEAASKEEAEVIVADDPLVKYGCVNYQLYEWRIVME
>CP026692.1|AVH69030.1|89834_90170_+|KGK-family-protein
MSDQIILSDEDVVSMAQDTNFTEASTSTGEELMETVANLVFNNTSLQKDKAEAWAANGVNCKILLAQGGGWQKGKIRICFEFVPDKPTPTKPLIPTNSASPLDDLRSHLEV
>CP026692.1|AVH69040.1|106930_107371_-|hypothetical-protein
MARRKRNSTVLERADRRIESLQSISVELDFGQGLTIQAYTVTINDLRSKLAAYNTALSTIDKLTDDVNNAEKVVIAMSEQMLLGVGSRYGKISPEYEMAGGARRGNTKKKRSVLGNSKPTNSLAANSVEVSSANGSMNGVSGAIVS
>CP026692.1|AVH69041.1|107858_111548_-|magnesium-chelatase-subunit-H
MKRIVLIAGFESFNADLYRKAAFLANSRCPELDIRVFSDRDLTNKRTEVETALDGADVFFGSLLFDYDQVVWLRDRISQIPIRLVFESALELMSLTKLGDFAIGDKPKGMPKPVKFILDKFSNGREEDKLAGYISFLKIGPKLLKYIPVQKVQDLRNWLIIYGYWNAGGSENVASLFWTLAEKYLGLKVGDIPPLVETPNIGLLHPDYQGFFESPREYLEWYKTYCGDAMNRVSTKPIIGILLYRKHVITKQPYIPQLIRSFEKAGLTPLPIFINGVEGHVAVRDLMTTNYEIQQRQLGNIETPSLSNEAVKVDAIVSTIGFPLVGGPAGSMEAGRQVEVAKRILTAKNVPYIVAAPLLIQDIHSWTRQGIGGLQSVVLYALPELDGAIDTVPLGGLVGENIYLVPERVERLIGRVKTWVALRQKPASERKIAIILYGFPPGYGAAGTAALLNVPRSLLKFLHALKEQGYTVGDLPEDGEELIRWVKEADEIDDTKNIPTSVNAHTLEKWLGYLQTSRIEKQWKSLTGTGIKTYGDEFQIGGVQLGNVWIGVQPPLGIQGDPMRLMFERDLTPHPQYAAYYKWLQNEFQADALVHFGMHGTVEWLPGSPLGNTGYSWSDILLGNLPNLYIYAANNPSESMLAKRRGYGVLISHNVPPYGRAGLYKELVALRDLISEYREDPQKNYVLKEGICKKIVDSGLDADCPFEDAKRLGIAFTPENVRMFSVRAFDDYLVGLYEYLQVLENRLFSSGLHTLGEKPNEEELGSYLEAYFGGEEEVNEPQRRKERKEEREEEGRVIRDLLMQSTDELTNLLRGLNGEYIPPAPGGDLLRDGAGVLPTGRNIHALDPYRMPSPAAYERGREIAQKIIVQHLDEYGKYPETVAVMLWGLDAIKTKGESLGILLELVGAEPVKEGTGRVVRYELKPLAEVGHPRIDVLGNLSGIFRDSFVNIIELLDDLFQRAADAEEPEDQNFIRRHALALKAQGVENASARLFSNPAGDFGSLVNDRVVDGNWESGEELGNTWQSRNVFSYGREDKGQARPEVLNTLLKTSDRIVQEIDSVEYGLTDIQEYYANTGGLKRAAEKQGGKKVTTSFVESFSKDTTPRNLDDLLRMEYRTKLVNPKWAQAMANQGSGGAFEISQRMTALIGWGGTADFTDDWVYDQAAETYALDAEMAEKLRKANPEAFRNILGRMLEAHGRGFWEADDKKLDKLRQLYELTDEELEGVTV
>CP026692.1|AVH69042.1|111635_112238_-|hypothetical-protein
MKNLVSFITFFPLLLGFLLAAVWWTRDEKNLEPILTGLGLLATITGIFGERWASANEKRIEFLRALLNECRSNDVILSDERFNPNSHRPGRPIVFPRLIISVTEIAIASDVFAERQDRELFSLIHQWRHTANEFNRRLDITELRTFTNLSSQEIRLLYEALQQSKEFNDALNLTQHITTFLQSKYPKGSGDSEVLTPLRN
>CP026692.1|AVH69043.1|112252_113407_-|hypothetical-protein
MGSLNFVKLLENSINEPGLGWTLCFIGEDQSNKLAELTQELRGEFSATGDGKEILSGFSYWGIGPTIAWDHACNDRFYLVMKESIESFRYRWHQINANNIKDQKYHYVSLGVGTGEKDQHILSLLFHANPDFLYFPVDMSSEMLRLGVQRATRGSQLQGSHVLPIQVDFSIERNVDELRKLLDRVINNGSVLFSLLGNTLANFQQDTELLRTISKLMRSEDRLLLEVAITEELSEEAAQNAAKEYAKTKSFKEFVTSALLQNSDLHIDLNSVFFEGIVEADRGILIKILYRNLTGNKIEVTLPDRSVMNFEDQDTIRLYLTRKYTSNGIEKTISDCNLVLVDRLHTVLEPRLKNGFGMDLILIAPDSSGINKNPSVANDIWSKR
>CP026692.1|AVH69044.1|113976_114933_+|cell-wall-hydrolase/autolysin
MKFGIDSGHNCPPDTGARGIKFEDNLTLDVGNRVIAKLRALGNEVVVCRPSSASTVRDSLSKRCSTANGSKVDIYVSIHFNSFNGQANGTEVFATSETGRKIAKPVLDEIVKLGFFNRGVKSGSHLFVLKNTDMPAILVEGCFVDSQKDMNLYNPEAMANAIVKGLTGKVASVPVNPVPDEEDNVDTTIIRLQKALNQLKITDKNGKALMEDGFTGANTKSAVEKFQTIVGVQSTGIADSATWNAINQILAKRILRPNHAGNAVVRYLQYRLGVDNDGVYGPQTEVVVKNFQKQNGLDADGIIGPASWQKLIGSADGN
>CP026692.1|AVH69045.1|115535_117758_-|histidine-kinase
MSQIYPISKTCACRNVARCRTKEAGRLFLWFPVPHTLKKVTSYLQQFAFKYELMQERPGLSLECRPGQSLEIARNLAKLLAPRELKETQVLFIQGTFQPQLHDFSDIASLQRFIKLNQSGWLVEMLATERFTSYFQPIVSINDTSQIFGYESLLRGLDEQGNLVLPTPIVELATEAGLLPQVDQVARLSTITQFSRYEVSGHIFINFAPTSLYDPAFCLRSTVEAIDTAGISHDRVVFEVVESDNPQDLTHLKTVLKYYRDAGFLVALDDLGSGYSSLNLLHQLRPDFIKLDMELIRDVHQDLYKASITEKLLEITQKLNIQTVAEGIECIEELNWLRERGANFAQGYLIGKPSAVPVTTTPYFDPIVLTVASTYSQQVEQRVVRHQSEPERIVADVTQRIRQSLELDEILQTTVAEVRQLFEVDRVVMYQFKPDWSGLVVVESLAEGCMSILGFHVMDTCFKSTRAAYYQQGNTRAIENIETAGLSPCHIHLLKSLQIRANLVVPILQQGCLWGLLIAHQCRHPRQWQQSEINLFNQLAGQAAIAIQQSELYHQLQQANQELQRLACSDGLTQVANRRCFDETLNTQWQWLAREQGSLSLILCDVDYFKLYNDTHGHLAGDDALRQVAKAISQTVKHPADLVARYGGEEFAVILPNTDIEGAIAVARDIQTNISGLQMPHPHSQVSEFITLSLGVATITPDSQLSPATLIAAADQGLYEAKAQGRNCVVQMDCQDADAR
>CP026692.1|AVH69046.1|118370_122636_-|histidine-kinase
MKNESTLASNADVNFLIGGGEMGARMREQDWSKTSLGPTQQWPQSLKTAVRIMLTSRQPMFVWWGEELINLYNDAYKTIIGGKHPAAFGQPASYVWREIWDQVGPRAESAMLKNEGTYDEALLLIMERNGYPEETYYTFSYSPVPNDQGDTGGIICANTEDTQRIISERQLALLRELAARTVDARTFDEACTLSASCLESNPYDLPFAMIYLVDPDKQEVFLAGTCRIGQNHVAVPETVALDADCVWPFAEVIRKHQAKLISDLEVSFSSLPCGVWQRSPHQAIAVPIAPSGQTGKAGILIVGLNPFRLFDDNYQGFIDLVAAQIAASIANAQAYEEERKRAEALAEIDRAKTVFFSNVSHEFRTPLTLMLGPLEDTLTTCATLLPAKEREQLEMVQRNGLRLLKLVNSLLDFSRIEAGRVEASYEPTNLATFTAELASVFRSTVERAGMQLSVNCPSLPEPVYVDREMWEKIVLNLLSNAFKFTMAGKITVSLHWSNDRIEFAVKDTGIGIPAAEIPHLFERFHRVKGAQGRTFEGSGIGLSLVQELVQMHGGRVDVTSLLGVGSCFTVSIPTGYTHLPPDRISAPRTLASTALGATPYLEEALRWLPQEAGEQGSRGAGEKEVFSLLPLYPSAPSARILLADDNADMRDYVNRLLSQQYEVESVPDGLAALDSARGRVPDLVLTDVMMPGLDGFGLLQALRANPQTQKVPIILLSARAGEEARVEGLEAGADDYLIKPFSARELLARVEAALKMARLRQEAMEREQGLRIEAEVAKAHLETVIAGIQDQFFVLDREWRYTFVNDQVAEIVGIPKEELIGRIVWEVFPDVINSEFDTEVHRAMALPTPLANAQNTVVQFEYFYPAWQRWFENRIYPFAEGVSIFVTDISDRKQAEKALRESEEKFRNMADNAPFMVWVTDSDGYCTYLSQSWYDFTGQSEEMGLGFGWLNAVHPEDYNDARNVFLEANKSYSAFRLEYRLRRKDGKYRSCIDAANPWFGVDGQFKGYIGSVIDITERKVAEAERDRLLELEQAARTEAERANRIKDEFLAVLSHELRSPLNPILGWARLLQTREFEPAALKKAIATIERNAKLQAQLIEDLLDVSRILQGKLNLKMLPVNLVFVIEGGLETVRLAAEAKNIQIQTMLDASFGEVLGDSGRLQQVIWNLLTNAVKFTPEGGKIDIQLERVDTQAQITVSDTGKGISPDFLPYVFEYFRQADSTITRKFGGLGLGLAIVRHLVELHGGTIWAESLGEGQGATFRVMIPLIKKDLTPKQHIDIAALNPSSPTEILAGIQILVVDDDDDTRDFHTFVLEQAGAMVTAVTSAKEALQILAESEPDTLLSDIGMPEMDGYMLMRQVKALQANQAKQILAIALTAYAGEINQQQALESGFQKHLSKPVEPDELVKAIATLIGRSGNV
>CP026692.1|AVH69047.1|123991_125038_-|RNA-3'-terminal-phosphate-cyclase
MIEIDGSYGEGGGQVLRTSLSLAAITGEPIRITGIRAGRKKPGLAAQHLTAVRAAGRICNAQLRGDALGSMLLEFIPGSAVQAGIYTFDVSKAQQGGSAGAIALVLQTILLPLALASGNSLVTLKGGTHVNFSPTATYIEQVYLPILQRMGIEAQVKLGAWGWYPQGGGEVKLQVHGGGKLGGIDLLERGDLQQVRGLAVVTELPSHIPQRMANRAENLLRSAHLKVAVQTLRERGVAPGAGIFLTAEYQNSLTGFGGFGRLRLSAETVAEIACQQLLEFHYTGAAVDEHLADQLLLPAALASQESQYRVAEVSRHLTTNAAVIEQFGLAQITVDEADKIVSVKSLNR
>CP026692.1|AVH69048.1|125182_126550_-|FAD-linked-oxidase
MTTKLDALINSLEGIETITDSTQVAKLSQDYHTFSPVLVSKLEGKVGDIVVRPANEAEVLKVAAACAKHRIPITVRGAGTGNYGQCVPLHGGVILDMTRLQEILWVKPGVARVEAGVKLAALDKKTREIGWEIRMAPSTYRTATIGGFIAGGSGGIGSIQYGLLADRGNILALRVITVEDEPRAIALRGDDVQKVNHAWGINGIITEVEIPLGPAYPWAEVIVTFDDFMTAAKFGQAIGNADGMIKKLISVFASQISQYFHALQEYIPEGTHSVFLIISEPSLEFLPTLVQQYGGQITYKKLDEEAAKGTHLAEFSWNHTTLLARSVDTGITYLQSLFPSDASGGLRLRSLQLVEQMYNYFGDEVMMHLEFFRVNGVVVPGALQLVRYTTEERLNEIIRYHEEQGVSIANPHTYIIEDGGRKVIDREQLKFKEIVDPYGLMNPGKSKVIQFQIQN
>CP026692.1|AVH69049.1|126731_127394_-|hypothetical-protein
METQHNPPIEHQNVPINHRGLHDFLYSSDNEHAAIEVSITPELANNGTEIIDFEAWSVAAQNAKIAGVYAVLDAERYTQYIGYSRNVLLSLNGHLRQNGEQKCAFVRVQAFKFPKRQEMEDLRDAWIAELESTPPGNATDCGMWASTVGEATKAVMSEAQLQAYEEKKLKLRKAMADTTLSKESETIDASEAERQRQLEAAVKNDDWSVIIDAQTQETKY

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Crispr_ID: CP026692_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_3

892240-893645

TypeI-D

I-D,II-B

Consensus_repeat	Method
ATTGCAATTCATCAAAATCCCTATTAGGG----------ATTGAAAC	PILER-CR
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	CRISPRCasFinder
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	CRT

19 spacers

cas2,cas1,cas4,cas6,2OG_CAS,cas3,csc1gr5,csc2gr7,cas10d

The CRISPR arrays of CP026692_3

>merge|CP026692|3|892240-893645|PILER-CR,CRISPRCasFinder,CRT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACACATTTAACCCGCCAATGCCCTCCTTCCTTCCAAATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACAGACCGATGTACACCCCATAGAGATGCAGGGACGTATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACTAAGACACTAGCATCAATCGCTTTAACGCTAGCATTATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACCGCCATTGACATCGACATAAATTGCAAGATTTCCGATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACTAATTTTTTACCCTCTAGCTATCAACTAGAGGCTTTTATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACTATTGATAAAGGTAACGTCCATGTATTTCTCTAAGATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACGTCTCCCTCCCAATGGGAGGACAGGAATGCACATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACGTTTGAAGTGCAGCAGCGCGAGAATCACTATCCCAATATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACGCCGTGGTCATTTGCAAGCGCAACAGAGGAGCTACTCATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACATCAGCCGTAGGCGCACCCCCCAAGGGTGCGATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACACCTTTGCGCCGTATGCTTTCTTGCTTCCTTGCACATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACCTTTCCTTAAACATTCAATGCATTGTACTGACTTATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACGTAACCGTGGGATAGGAAGTAATCGATAGTGACTAATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACTGCTCTAGATACAGTCACAGTTACCCCTCCAGTAACATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACCGCTACAGCTGCCATGTAATGATTGGAGTTTAAAATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACGGCACGTATAAAGGTGTTTGGGTAGAAGCAGTTGAATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACATTAACTCATTTAAAAGAAGCGGAATTAAATCTAAAATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACAATTTCTAATAATTAAGTGAATTTTAACTTATTAAAATTGCAATTCATCAAAATCCCTATTAGGGATTGAAACTAGCTCAAACAGCCTTCTAGTAAGGTTTACAACCACATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC

>CP026692|3|1|892240-893645|PILER-CR
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	ACATTTAACCCGCCAATGCCCTCCTTCCTTCCAA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	AGACCGATGTACACCCCATAGAGATGCAGGGACGT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TAAGACACTAGCATCAATCGCTTTAACGCTAGCATT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	CGCCATTGACATCGACATAAATTGCAAGATTTCCG
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TAATTTTTTACCCTCTAGCTATCAACTAGAGGCTTTT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TATTGATAAAGGTAACGTCCATGTATTTCTCTAAG
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GTCTCCCTCCCAATGGGAGGACAGGAATGCAC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GTTTGAAGTGCAGCAGCGCGAGAATCACTATCCCAAT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GCCGTGGTCATTTGCAAGCGCAACAGAGGAGCTACTC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	ATCAGCCGTAGGCGCACCCCCCAAGGGTGCG
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	ACCTTTGCGCCGTATGCTTTCTTGCTTCCTTGCAC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	CTTTCCTTAAACATTCAATGCATTGTACTGACTT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GTAACCGTGGGATAGGAAGTAATCGATAGTGACTA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TGCTCTAGATACAGTCACAGTTACCCCTCCAGTAAC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	CGCTACAGCTGCCATGTAATGATTGGAGTTTAAA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GGCACGTATAAAGGTGTTTGGGTAGAAGCAGTTGA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	ATTAACTCATTTAAAAGAAGCGGAATTAAATCTAAA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	AATTTCTAATAATTAAGTGAATTTTAACTTATTAAA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TAGCTCAAACAGCCTTCTAGTAAGGTTTACAACCAC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC

>CP026692|3|3|892240-893645|CRISPRCasFinder
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	ACATTTAACCCGCCAATGCCCTCCTTCCTTCCAA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	AGACCGATGTACACCCCATAGAGATGCAGGGACGT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TAAGACACTAGCATCAATCGCTTTAACGCTAGCATT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	CGCCATTGACATCGACATAAATTGCAAGATTTCCG
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TAATTTTTTACCCTCTAGCTATCAACTAGAGGCTTTT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TATTGATAAAGGTAACGTCCATGTATTTCTCTAAG
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GTCTCCCTCCCAATGGGAGGACAGGAATGCAC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GTTTGAAGTGCAGCAGCGCGAGAATCACTATCCCAAT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GCCGTGGTCATTTGCAAGCGCAACAGAGGAGCTACTC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	ATCAGCCGTAGGCGCACCCCCCAAGGGTGCG
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	ACCTTTGCGCCGTATGCTTTCTTGCTTCCTTGCAC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	CTTTCCTTAAACATTCAATGCATTGTACTGACTT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GTAACCGTGGGATAGGAAGTAATCGATAGTGACTA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TGCTCTAGATACAGTCACAGTTACCCCTCCAGTAAC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	CGCTACAGCTGCCATGTAATGATTGGAGTTTAAA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GGCACGTATAAAGGTGTTTGGGTAGAAGCAGTTGA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	ATTAACTCATTTAAAAGAAGCGGAATTAAATCTAAA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	AATTTCTAATAATTAAGTGAATTTTAACTTATTAAA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TAGCTCAAACAGCCTTCTAGTAAGGTTTACAACCAC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC

>CP026692|3|1|892240-893645|CRT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	ACATTTAACCCGCCAATGCCCTCCTTCCTTCCAA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	AGACCGATGTACACCCCATAGAGATGCAGGGACGT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TAAGACACTAGCATCAATCGCTTTAACGCTAGCATT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	CGCCATTGACATCGACATAAATTGCAAGATTTCCG
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TAATTTTTTACCCTCTAGCTATCAACTAGAGGCTTTT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TATTGATAAAGGTAACGTCCATGTATTTCTCTAAG
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GTCTCCCTCCCAATGGGAGGACAGGAATGCAC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GTTTGAAGTGCAGCAGCGCGAGAATCACTATCCCAAT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GCCGTGGTCATTTGCAAGCGCAACAGAGGAGCTACTC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	ATCAGCCGTAGGCGCACCCCCCAAGGGTGCG
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	ACCTTTGCGCCGTATGCTTTCTTGCTTCCTTGCAC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	CTTTCCTTAAACATTCAATGCATTGTACTGACTT
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GTAACCGTGGGATAGGAAGTAATCGATAGTGACTA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TGCTCTAGATACAGTCACAGTTACCCCTCCAGTAAC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	CGCTACAGCTGCCATGTAATGATTGGAGTTTAAA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	GGCACGTATAAAGGTGTTTGGGTAGAAGCAGTTGA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	ATTAACTCATTTAAAAGAAGCGGAATTAAATCTAAA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	AATTTCTAATAATTAAGTGAATTTTAACTTATTAAA
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC	TAGCTCAAACAGCCTTCTAGTAAGGTTTACAACCAC
ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH69595.1\|885257_886016_+\|CRISPR-associated-protein-Csc1	csc1gr5	cd09711_csc1gr5_CAS-I-D	gnl\|CDD\|274458
CP026692.1\|AVH69603.1\|894754_895414_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69601.1\|891683_891971_+\|CRISPR-associated-endoribonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP026692.1\|AVH69598.1\|888977_889814_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
CP026692.1\|AVH69609.1\|902992_903733_-\|precorrin-6x-reductase	unknown	unknown	gnl\|CDD\|236144
CP026692.1\|AVH69592.1\|880784_881036_+\|protein-of-unknown-function-DUF433	unknown	unknown	gnl\|CDD\|225291
CP026692.1\|AVH69597.1\|888367_888988_+\|oxoglutarate/iron-dependent-dioxygenase	2OG_CAS	-	gnl\|CDD\|379309
CP026692.1\|AVH69593.1\|881514_884208_+\|CRISPR-associated-protein-Csc3	cas10d	mkCas0201_cas10d_CAS-I-D	unknown
CP026692.1\|AVH69600.1\|890656_891661_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|274976
CP026692.1\|AVH69596.1\|886008_888291_+\|CRISPR-associated-helicase-Cas3	cas3	cd09710_cas3_CAS-I-D	gnl\|CDD\|187841
CP026692.1\|AVH69611.1\|904499_905279_-\|uroporphyrin-III-C-methyltransferase	unknown	unknown	gnl\|CDD\|235711
CP026692.1\|AVH69594.1\|884225_885254_+\|CRISPR-associated-protein-Csc2	csc2gr7	cd09709_csc2gr7_CAS-I-D	gnl\|CDD\|375747
CP026692.1\|AVH69604.1\|895894_896629_-\|polar-amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
CP026692.1\|AVH69602.1\|893685_894270_-\|NADPH-dependent-FMN-reductase	unknown	unknown	gnl\|CDD\|377026
CP026692.1\|AVH69607.1\|899880_900861_-\|2-dehydropantoate-2-reductase	unknown	unknown	gnl\|CDD\|235821
CP026692.1\|AVH69605.1\|896621_898112_-\|polar-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|270346
CP026692.1\|AVH69608.1\|900911_901781_-\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|238815
CP026692.1\|AVH69606.1\|898208_899402_-\|cell-division-protein-Fic	unknown	unknown	gnl\|CDD\|225718
CP026692.1\|AVH69599.1\|889845_890439_+\|CRISPR-associated-exonuclease-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
CP026692.1\|AVH69610.1\|903729_904197_-\|protein-of-unknown-function-DUF1636	unknown	unknown	gnl\|CDD\|227756

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH69595.1\|885257_886016_+\|CRISPR-associated-protein-Csc1	gnl\|CDD\|274458	TIGR03159, cas_Csc1, CRISPR type I-D/CYANO-associated protein Csc1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family is a CRISPR-associated (Cas) family strictly associated with the Cyano subtype of CRISPR/Cas locus, found in several species of Cyanobacteria and several archaeal species. This family is designated Csc1 for CRISPR/Cas Subtype Cyano protein 1, as it is often the first gene upstream of the core cas genes, cas3-cas4-cas1-cas2.	1.19576e-89
CP026692.1\|AVH69604.1\|895894_896629_-\|polar-amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	3.63958e-143
CP026692.1\|AVH69601.1\|891683_891971_+\|CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.66946e-36
CP026692.1\|AVH69598.1\|888977_889814_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	3.32431e-59
CP026692.1\|AVH69609.1\|902992_903733_-\|precorrin-6x-reductase	gnl\|CDD\|236144	PRK08057, PRK08057, cobalt-precorrin-6x reductase; Reviewed.	4.6038e-104
CP026692.1\|AVH69592.1\|880784_881036_+\|protein-of-unknown-function-DUF433	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	1.33135e-26
CP026692.1\|AVH69597.1\|888367_888988_+\|oxoglutarate/iron-dependent-dioxygenase	gnl\|CDD\|379309	pfam13640, 2OG-FeII_Oxy_3, 2OG-Fe(II) oxygenase superfamily. This family contains members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily.	3.29318e-08
CP026692.1\|AVH69600.1\|890656_891661_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	2.22313e-157
CP026692.1\|AVH69596.1\|886008_888291_+\|CRISPR-associated-helicase-Cas3	gnl\|CDD\|187841	cd09710, Cas3_I-D, CRISPR/Cas system-associated protein Cas3; Distinct diverged subfamily of Cas3 helicase domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Diverged DNA helicase Cas3'; signature gene for Type I and subtype I-D.	1.53029e-150
CP026692.1\|AVH69611.1\|904499_905279_-\|uroporphyrin-III-C-methyltransferase	gnl\|CDD\|235711	PRK06136, PRK06136, uroporphyrinogen-III C-methyltransferase.	5.08167e-152
CP026692.1\|AVH69594.1\|884225_885254_+\|CRISPR-associated-protein-Csc2	gnl\|CDD\|375747	pfam18320, Csc2, Csc2 Crispr. The Csc2 Crispr family of proteins forms a core RNA recognition motif-like domain, flanked by three peripheral insertion domains: a lid domain, a Zinc-binding domain and a helical domain. The CRISPR-Cas system is possibly a mechanism of defence against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	1.79588e-161
CP026692.1\|AVH69602.1\|893685_894270_-\|NADPH-dependent-FMN-reductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	2.10239e-45
CP026692.1\|AVH69607.1\|899880_900861_-\|2-dehydropantoate-2-reductase	gnl\|CDD\|235821	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed.	8.19137e-123
CP026692.1\|AVH69605.1\|896621_898112_-\|polar-amino-acid-ABC-transporter-permease	gnl\|CDD\|270346	cd13628, PBP2_Ala, Periplasmic substrate binding domain of ABC-type transporter specific to alanine; the type 2 periplasmic binding protein. This periplasmic substrate component serves as an initial receptor in the ABC transport of glutamine in eubacteria and archaea. After binding the alanine with high affinity, this domain Interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. This alanine specific domain belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.71539e-113
CP026692.1\|AVH69608.1\|900911_901781_-\|inositol-monophosphatase	gnl\|CDD\|238815	cd01637, IMPase_like, Inositol-monophosphatase-like domains. This family of phosphatases is dependent on bivalent metal ions such as Mg++, and many members are inhibited by Li+ (which is thought to displace a bivalent ion in the active site). Substrates include fructose-1,6-bisphosphate, inositol poly- and monophosphates, PAP and PAPS, sedoheptulose-1,7-bisphosphate and probably others.	7.84837e-44
CP026692.1\|AVH69606.1\|898208_899402_-\|cell-division-protein-Fic	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	4.31976e-58
CP026692.1\|AVH69599.1\|889845_890439_+\|CRISPR-associated-exonuclease-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	5.8807e-59
CP026692.1\|AVH69610.1\|903729_904197_-\|protein-of-unknown-function-DUF1636	gnl\|CDD\|227756	COG5469, COG5469, Predicted metal-binding protein [Function unknown].	2.06253e-64

>CP026692.1|AVH69601.1|891683_891971_+|CRISPR-associated-endoribonuclease-Cas2
MYIVVSYDIPEDKRRTKIHSILKSYGQWMQLSVFECDITPTQYAKLRSRLAKLIKPDTDSVRFYFLCGCCQRKVERIGGEQPRDETIFFAESPSS
>CP026692.1|AVH69600.1|890656_891661_+|CRISPR-associated-endonuclease-Cas1
MGTLYVTQADAFIGKVDERLTVKAEQKTILDIPLIKIEGIVVLGRATISPAVVSELLERHICLTFLTQNGRYLGRLEPEVTKNIFVRKAQWQAVGESQPAIHLVRGFVRGKLKNYRHSLLRTQREHPDTDLNNNITRLENAIAPIENTNNIDSLRGLEGAGSAAYFGCFQQLIKTPEFRFEARRRRPPTDPVNALLSFGYSLLRHDVQSALNIVGFDPYLGYLHVERYGRPSLALDLMEEFRPLIVDAVVLSLINKRSLTLTDFTTEPLSGAVSLTKEGLHTFLRAYEQKKQSDFKHPVMGNKCTYQEAFEIQARLLSKYLMNEIDKYPPLVLK
>CP026692.1|AVH69599.1|889845_890439_+|CRISPR-associated-exonuclease-Cas4
MNQTEYVSIAALNQYAYCPHRCWRMFCAGEFTDNQYTIEGTTLHDRVHTTSDGQRGETWQIRAIWLKSEQYKLIGKSDLIEAESGQVYPVEYKRGRKGEWDNDELQLCAQALCLEEMTGQPVNTGYIYYAHSHQRQLVEINQELRQSAIATIESVTNILETGVMPKPVYSKRCKGCSLYSQCLPKATDKVKSYQEVH
>CP026692.1|AVH69598.1|888977_889814_+|CRISPR-associated-endoribonuclease-Cas6
MPHSLVLNLLPQSPIPPQFLTGRHLHALFLTLVSSVDTTLGDRLHDSTADKAFTLSPLQINSPLLKGGKGGSKLQYSHQQSIPAGTPCWWRISLLDDTLFGKLTQLWLNLNPNRPWHLGPADLYITSIQGTPQSIQPWANATTYAQLYEEASDRISSINLSFSTPTAFRQGQYDTTLPTRESVFNSLLSRWNKYSGIEFPQIAIESIFPSFVNIHTEILADSRSKFIGIIGEVTYKILGSVEPIQIKQINALADFALYSGVGRKTTMGMGIARRLYSP
>CP026692.1|AVH69597.1|888367_888988_+|oxoglutarate/iron-dependent-dioxygenase
MKHYQQQSNAFPSDYLNNLWGEIQACPYFAINNLNRDFVATKGFSVVFQRSGLPKVEQQFPYFKPYLDLALQPNCNAFYLNPLQLKEGSRVDPHIDRSLRSYSKTIEPPAVVSVLYVRVPADMEGGELVLRSHKRQLGQIKPQINTLVYFQGDLTHSVNAVKTPGNRLSLVCEQYSLSEAELQEIPEFTVESRITQSTTKKKKYAS
>CP026692.1|AVH69596.1|886008_888291_+|CRISPR-associated-helicase-Cas3
MSNQKLVIRLEPRSISACASLPDELSFIGNALQHQVDVFEQSKDADIILDLAPTGTGKTKAGLTVLKHQPNKSAVYIAPTNALIEQQTEAAKQFVRDANLPHVVKSASAKDIKSWPDEKVGRRSGEKLYNVLRNPTTVFDDVGANTPILLVTNPDIFYYATFFAYNNLDRGNIAAGFYTKFSTVIFDEFHLYDAKQLVGMLFYLAYSHVFRFFQDGRKVVLLTATPEPACELALQNFKQAGVKIARIDGEAGNTNLLPSQTAVNLELRPKPDSKEEWLAELTAEVVQRFRERPDENGAVILDSLDNINRLSTLLRQQGIGDDIGRITGPAPKKDRERAMQCQIILATSTVDVGFNFEKYPKPKRQNLDWLIFSARDRAAFWQRIGRVGRVLGKSETNIDSESIAYLPANAWEEGLTSLDTSEGRTALKDVLETLPCLDKPFLKAYWRSEAFLEIARPLLELEEMLEGLAEEKFILELFNTLKSIFEGNRTWDDYRYRMKLLRGAETIAKKTPKEIKKDWKYIKGGQAFVRTFIKAKFPEDWDDLQAGRTTLDEYVDLFKKDEDALAELKEFAEVFSTSYAPLFSFRSSLFESLSIRDPYGFILDESEETRLDPFHLLRYYEFVQNGDYIEVTSRAAEAYQLSFELRYTDNWQEFISTELNKLTAFKNCRIIRTLGGGTRPTDQIQSLNKHLLPGIIICPRTNAAVIFQLNKQGIISYPITIVCNDVEKEYRFFAGLSGILAIAMKFKQLRLPDDEVFIAG
>CP026692.1|AVH69595.1|885257_886016_+|CRISPR-associated-protein-Csc1
MSTIPFQQAKLVELYCLEPVFFASRELSDTYYTEGVIGNYALTYALGRVNSPYRLQGEATGRPTYKEDFQPIAQDFYILPASPIGRVTFRFERFNALSDAYWYAMTNNRVATAREDLPLQRQGKKPSSFRPSNFPQTGRLRMIERRNKFQTLVFGNHQLPNYIRLGKFMSKVKVNVLNEFPVTLLPEGEYQSQHYLNAADLPQQIETLAFDLISIPPAPIIKNLRFRGAAWQVGQMIVPAGLHFCGRENSNE
>CP026692.1|AVH69594.1|884225_885254_+|CRISPR-associated-protein-Csc2
MSIQKLSSVIATIYENFPKGRFITLVVLRTTHSETIFRTEGSGEPMCSEFVQAGLEGENQKTIIQRLVMTKRKQVAPERRYGREHLRAHELLYTNIKDGSLCSLNTNAPCEMCTDCFLYGFAAGGGGAQKSRIWTEDAFSILPASDVVGDRTINAIYETGTMRDEKGNPSTALNTSEYIKPGVHFLDVVTLKDVTADELRYIIGNILFTSRYGAVSSRVGRMENQILGVFGSITELPSSLELVQATYDVLGKPLEHPLNINQLITASKQVIANWQNKRGVSVHLSEAEVTNLLTDVETNWSEAERDNFLKRLSQSYEPFRQVATEKKKAKAKGKNTLVEVES
>CP026692.1|AVH69593.1|881514_884208_+|CRISPR-associated-protein-Csc3
MIKRNKLLNGPPKSLEEVYFTEIRSQLYENHAHRHQTGVRTGTTLAEHLDSACQFILTVSRIAEVPEDKRPLLLAATAVHDLNKLDTKGRNVKTLARNQEFLREQLEKACVLTFIVSEDDLELVRKLIERHSGHNVSDGARFLPEDPNIERWAAMLTAADLFDLGIPDAQRFRKLEKELTVAFGRSCNLFRIRISEDKGYITALLLGACEEVLQKHGLNPLAIFPDGELFEGEALPNVDLTKEIAAVWQIKIDQVFGNNIERLVRATKDGIKVTYQAIQQNIEEVLVNVLALLEKKKAGYKSDKIAKDVTKWGEAAGADALIKAAELQLLPVSNAEEFAISEGLKAAYLSYREARLSPKEVWDKIAYHTGISELQRTAIEPFNGQYGRPLFAAKAAIKGIEGIKEALQESFQLRKESTQISEETEVSEEMIAAVSRMVNLPFAIRLNGANDLNTYVEANPRQRCSLGSTSTDIDELISDNMPPGTKVQAFSNRLPGGISAEPKRQADSIAALAYQLMAVGANFAAVKKQDLFYLHLALPKGSAPELLRIWRELLKQLAATNAEGGTVTIDELKLYRDNQLEFKANKVVGLALPKRPDFVHTSVIIPLVWGDINNSLALLKSLRLALEISLSLDIGFPFTLSSNLEVELSNDVYGRIEGIPSALQTLLGNGQYEQRQDAEKILERLRCIGKLATSVASIQKADDCFYDLARACVRPIELYYVLLRWTLREQDEPNLSIIWSRICEPLNTLLENLMPDEKSLLTKYLKEAAQVAAEAKIWGSSFKRTAQAEPFTAFIAAIRSQKSYLGLDVIFAALIQQYHTRLDRIREHGVGATKYEQVKHYYEVLRKLYEEVYSARPEKFLSDQKTLEAAYLFFLEEARKQLKTQLQDDSVETNTTV
>CP026692.1|AVH69592.1|880784_881036_+|protein-of-unknown-function-DUF433
MNEQTLLERITFNPQIFGGKPIIRGRRLAVEHILGMLAVGDTIETLLEAYPWLEREDVQACLVYARRLVGHERVEPLFIESQR
>CP026692.1|AVH69602.1|893685_894270_-|NADPH-dependent-FMN-reductase
MAFTPKILAFAGSTRIDSYNKKLVKIAAVGAKAAGAEVTYLDLRDLPLPLYDEDLEAQEGLPANARTFKDLMISHQGLLIASPEYNSSLTAVLKNAIDWASRPSPNEAPLALAAFVGKVASIMSASPGALGGLRGLVHLRSILGNIKVLVLPDQVAVSKAYEAFNVDGTLKNPKQQESIERLGDGLTKILLKLN
>CP026692.1|AVH69603.1|894754_895414_-|hypothetical-protein
MKLQIFPVLLAMVTCSSIPFVFAVSSAQAADFAFSANFSNGYSAEGSFTTKTNAPASFSEISPGNIQFSTSFLESQSLSIFDSNNTLLQSGSSVINGISNDKFLRLDYDNSLTANLPVLNVSTETPSQNPYYFIGNNVDPSGNPVAAGSTNYNLFSYDKITDKYTFLGDTTSIKATPVPEPSSVISSLAVAAFGFGFAFKRKLNNRTASNCPPTNVAVI
>CP026692.1|AVH69604.1|895894_896629_-|polar-amino-acid-ABC-transporter-ATP-binding-protein
MSNVVIRTEFLCKSFGKLDVLKDISSEFYQGEVVAILGPSGSGKSTFLRCINLLEQPTRGRIYFHEQEITKPKANIAKVRQQLVMVFQHFNLFPHMNVLQNVTYAPIKVKGINKQKAEQHGLELLAKVGLESKVSVYPSKLSGGQKQRVAIARALAMEPEMILFDEPTSALDPEMVKDVLEVMKALALSGMTMAIVTHEMGFAREVANRIMFLDQGSLAEDTTPDEFFQNPQCDRAKQFLEKML
>CP026692.1|AVH69605.1|896621_898112_-|polar-amino-acid-ABC-transporter-permease
MKKKKVWLLTILLVAVVGISIITGHSNSLKAASSLGKDTLTIITSPDYPPYEFYDTKGGDRQIVGFDIDIAKTLAEKLGFKLQIMESDFNGLIPALQANRADFVMAGMTPTPERQKNIDFSIIYYEAKDTIVAPKGSNLKQPQNLSGKKVGVQLGTIQEQNAQKIAKKVAGIQLKQLNKVPEVVQEIKSGRIDAAIVEDTVAKGFAQANPDLEFNIIPSEEASGSAIAFPKGSSFVEPFNKVLQQMKDDGTLNKLVAKWFSQNITANPASSTPAKGGLNLDFTRILPDIPFILRGIPLTLLFTLLSVSLGLIWGTILSLLKILGIKPLTWVANAYTSVFRGTPLLLQLALVYYATPQLTGYDISALEAGVLTFTLNSGAYMSETIRGGIQAVDKGQSEAAMSMGVPYWLMMWDVILPQALKNILPALVNETIGLLKDSALVSTIGVVEILRSAQIVGANKYIYFEPLLFAGLIYYVLVMGMTLGASALERRLRESE
>CP026692.1|AVH69606.1|898208_899402_-|cell-division-protein-Fic
MDKKLSLVNEIDNMIDTDRAGRYIEQLTGYKAFIPNPLPPIPKLCIDDEMLELLSQADRALGRLDGSTDALPNPDLFVFMYVRKEAVLSSQIEGTQASLIDVLEFESRTVEPDNPQDVTEVVNYIAAINHGLERLENNFPLSLRLIREIHKELLREGRGSEKGSGEFRRSQNWIGKGRCNLKEATYVPPPPHDMQEALSNFEKFLHDSAPMPALIKIGLAHAQFETIHPFEDGNGRTGRLLITLLLCEKNILKRPLLYISYYFKKYRLQYYDHLQSIRDNGDWESWLKFFLKGVYEVSQEASTVARQIVNLKEDHRKTVMERMGNRKAGNAIALLEKLYYKPVFNIEMAQEFTQLSYTNANILVRELCNIGIVEEVTGNKRNRAFIYEPYLSIFKES
>CP026692.1|AVH69607.1|899880_900861_-|2-dehydropantoate-2-reductase
MKICIVGAGAIGGYLGAKLALAGEAVTLIARGSHLEAIQKNGLKLFMSDGSSQIATPFMATSDIQSAGTQDVVILTVKAHSVSAIAPFLPALYDAHTIVVTAQNGVPWWYFRKYGGEYEDTRIQSVDPDGIIEASIGAERAIGCVVYPATEIIEPGVIKHIEGDRFTLGEIDGTKTERIQLLAQTLKQAGFKAPIRNQIRTEIWIKLWGNVAFNPISALTGATLEDICRYPLTRELARQMMTETQAIAENLGIKFGITLEQRINGAENVGAHKTSMLQDIETGRSTEIDAIVGAVAELGKLTQIPTPYIDAIYASVKLLEATKLKV
>CP026692.1|AVH69608.1|900911_901781_-|inositol-monophosphatase
MSTTPTTRLILETLLPHLKVAAAYAHFLQPKIAALPAKEQGNNFFSAALTDADVAIQNLVEVVLLGTFPDIRFYGEEYESSNNTKYFRATELGSEGDYLVTLDPIDGTKFYMDGHSNYQIILSILNSDDFEAVIAISPAQNVYFYALRGEGAFEGTLEMSLAACTPLHITSPKPAILLGWGMNAIAPLLKDRYQVIDIATDYSSDIQIPNLNGILSGDLSGAVIKSGKFIDGAALAFIAKEAGWIVTTLDGSTLPPLHTCKNYSLPGLIVAASKSVHQDLLKAMQSLAV
>CP026692.1|AVH69609.1|902992_903733_-|precorrin-6x-reductase
MIRVLILGGTGDAAELAAKVTTIQGLEVITSLAGRTREPSVPLGDLRVGGFGGVTGLASYLQVMQIDLLIDATHPFATQISFNAADAAMEVRVPRLMLIRPPWEKVSGDRWIELDNVAAAATAVQNQAQRVFLTVGRQELSAFAHLEKIWFLMRMIDPPGDDALVPPGMVLCDRGPFTLNNERQILIENNIDTIVSKNSGGDATKPKIIAARELGVKVVMVNRSAIPPGEQVSNVDAALAWLLDRC
>CP026692.1|AVH69610.1|903729_904197_-|protein-of-unknown-function-DUF1636
MPTEIDLLVSHICEVQMTTTVNISPTSPMEVAEHTLFVCKTCASVWQNGKRLGESGGEKLLHELQQLAQDWDLRDRFPIQEVECMSACNRSCVVAFAAKGKLTYLFGDLGVDGNASAVLECASQYYAKADGLLPWSERPEAMKKGILAKIPPLSK
>CP026692.1|AVH69611.1|904499_905279_-|uroporphyrin-III-C-methyltransferase
MNRTMTERNKYLGKVYLVGAGPGDPGLITLKAKGLLECADVVIYDALVSPAILAMINPQAEQINAGKRAGRHSLLQSETTQLLIDKAQDHAIVVRLKGGDPFIFGRGGEEMEELVKAGISTEVVPGITSGIAAAAYSGIPLTHRLYSSSVTFVTGHEAAGKYRPIVNWSAIAHGSETIVIYMGIHNLPYIVEELSAAGLNLETPIALVRWGTRPEQEELIGTLKTIVKQVEETGFSAPAIAVIGQVVNMHSILSGCRPV

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Crispr_ID: CP026692_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_5

971108-972373

Orphan

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	CRISPRCasFinder
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	CRT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	PILER-CR

17 spacers

The CRISPR arrays of CP026692_5

>merge|CP026692|5|971108-972373|CRISPRCasFinder,CRT,PILER-CR
CAACAAAAATTTCATAGGGATTTTGATGAATTGCAATCAGACTGGTAACAAGTCTGAAGAGTTAATTAAAAGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATTTTTAATGATTTACAGTTTGGGGGAACTGATTTTAATGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATTCTACTTTGCAAGTATACAACTTTTTAAGATACTAGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATTGTCAGACTTGTTACCTGCTGAATCTGTAAGTTGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATATTTAAAGCTTTTTCCTTAATAGATTCCTGCCATTGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATATGCGATGTATCCGGGGATGGAGGATGTTATAGGCGAGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATTTAATGTGGTTTTTTGCATTATTGTAAATATCAAGGTTGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATGTTCTGCTTCATCCTTTTCGTAAAAGGATTTTAAAGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATCATAGCCGTTAAGACGGCAGGGTAATCAGAAATATCTGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATTACTGCCTTTTCAGCATTTTTACCAAGTAATTTTCTGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATTTTATACAAGGGCGTAAACAAGCTCAAAATCAATTGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATTCGTTCAACAATGGCAGTGGTTGGAATGGTATATTTGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATTTTATTGCGAACACCTCTTAAGGAACCGTGGTTTTTTGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATACCAAAATTCAACTACCACGAAGGGCAGCACCTACGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATGTTGAGCAGTCTAAAGCAGATATCGCCAAACTACGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATATCGCTTTTTTCATATAAACGTAGGAAAAATATGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAATGGTATGGACTATGCAGCTATAGATACAGCTTTTGTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT

>CP026692|5|5|971108-972373|CRISPRCasFinder
CAACAAAAATTTCATAGGGATTTTGATGAATTGCAAT	CAGACTGGTAACAAGTCTGAAGAGTTAATTAAAA
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TTTTAATGATTTACAGTTTGGGGGAACTGATTTTAAT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TCTACTTTGCAAGTATACAACTTTTTAAGATACTA
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TGTCAGACTTGTTACCTGCTGAATCTGTAAGTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	ATTTAAAGCTTTTTCCTTAATAGATTCCTGCCATT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	ATGCGATGTATCCGGGGATGGAGGATGTTATAGGCGA
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TTAATGTGGTTTTTTGCATTATTGTAAATATCAAGGTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	GTTCTGCTTCATCCTTTTCGTAAAAGGATTTTAAA
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	CATAGCCGTTAAGACGGCAGGGTAATCAGAAATATCT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TACTGCCTTTTCAGCATTTTTACCAAGTAATTTTCT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TTTATACAAGGGCGTAAACAAGCTCAAAATCAATT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TCGTTCAACAATGGCAGTGGTTGGAATGGTATATTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TTTATTGCGAACACCTCTTAAGGAACCGTGGTTTTTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	ACCAAAATTCAACTACCACGAAGGGCAGCACCTAC
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	GTTGAGCAGTCTAAAGCAGATATCGCCAAACTAC
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	ATCGCTTTTTTCATATAAACGTAGGAAAAATAT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	GGTATGGACTATGCAGCTATAGATACAGCTTTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT

>CP026692|5|2|971108-972373|CRT
CAACAAAAATTTCATAGGGATTTTGATGAATTGCAAT	CAGACTGGTAACAAGTCTGAAGAGTTAATTAAAA
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TTTTAATGATTTACAGTTTGGGGGAACTGATTTTAAT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TCTACTTTGCAAGTATACAACTTTTTAAGATACTA
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TGTCAGACTTGTTACCTGCTGAATCTGTAAGTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	ATTTAAAGCTTTTTCCTTAATAGATTCCTGCCATT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	ATGCGATGTATCCGGGGATGGAGGATGTTATAGGCGA
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TTAATGTGGTTTTTTGCATTATTGTAAATATCAAGGTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	GTTCTGCTTCATCCTTTTCGTAAAAGGATTTTAAA
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	CATAGCCGTTAAGACGGCAGGGTAATCAGAAATATCT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TACTGCCTTTTCAGCATTTTTACCAAGTAATTTTCT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TTTATACAAGGGCGTAAACAAGCTCAAAATCAATT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TCGTTCAACAATGGCAGTGGTTGGAATGGTATATTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TTTATTGCGAACACCTCTTAAGGAACCGTGGTTTTTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	ACCAAAATTCAACTACCACGAAGGGCAGCACCTAC
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	GTTGAGCAGTCTAAAGCAGATATCGCCAAACTAC
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	ATCGCTTTTTTCATATAAACGTAGGAAAAATAT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	GGTATGGACTATGCAGCTATAGATACAGCTTTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT

>CP026692|5|2|971179-972373|PILER-CR
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TTTTAATGATTTACAGTTTGGGGGAACTGATTTTAAT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TCTACTTTGCAAGTATACAACTTTTTAAGATACTA
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TGTCAGACTTGTTACCTGCTGAATCTGTAAGTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	ATTTAAAGCTTTTTCCTTAATAGATTCCTGCCATT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	ATGCGATGTATCCGGGGATGGAGGATGTTATAGGCGA
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TTAATGTGGTTTTTTGCATTATTGTAAATATCAAGGTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	GTTCTGCTTCATCCTTTTCGTAAAAGGATTTTAAA
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	CATAGCCGTTAAGACGGCAGGGTAATCAGAAATATCT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TACTGCCTTTTCAGCATTTTTACCAAGTAATTTTCT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TTTATACAAGGGCGTAAACAAGCTCAAAATCAATT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TCGTTCAACAATGGCAGTGGTTGGAATGGTATATTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	TTTATTGCGAACACCTCTTAAGGAACCGTGGTTTTTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	ACCAAAATTCAACTACCACGAAGGGCAGCACCTAC
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	GTTGAGCAGTCTAAAGCAGATATCGCCAAACTAC
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	ATCGCTTTTTTCATATAAACGTAGGAAAAATAT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT	GGTATGGACTATGCAGCTATAGATACAGCTTTT
GTTTCAATCCCTAATAGGGATTTTGATGAATTGCAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH69665.1\|977970_978744_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69663.1\|976470_977361_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369035
CP026692.1\|AVH69657.1\|963256_964855_+\|serine/threonine-protein-kinase-SpkB	unknown	unknown	gnl\|CDD\|270916
CP026692.1\|AVH69666.1\|979168_979858_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69660.1\|973276_974113_-\|arogenate-dehydrogenase	unknown	unknown	gnl\|CDD\|180970
CP026692.1\|AVH69661.1\|974138_975746_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
CP026692.1\|AVH69655.1\|960419_960863_+\|4-hydroxybenzoyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
CP026692.1\|AVH69653.1\|957998_958796_-\|sulfite-exporter-TauE/SafE	unknown	unknown	gnl\|CDD\|376667
CP026692.1\|AVH69650.1\|954818_955781_+\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|273463
CP026692.1\|AVH69652.1\|957278_957941_+\|cadmium-resistance-transporter	unknown	unknown	gnl\|CDD\|226750
CP026692.1\|AVH69662.1\|975809_976400_+\|protein-of-unknown-function-DUF1517	unknown	unknown	gnl\|CDD\|369378
CP026692.1\|AVH69668.1\|980343_981009_+\|O-methyltransferase	unknown	unknown	gnl\|CDD\|366722
CP026692.1\|AVH69654.1\|959694_960378_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP026692.1\|AVH69651.1\|956176_956863_-\|cadmium-resistance-transporter	unknown	unknown	gnl\|CDD\|226750
CP026692.1\|AVH69659.1\|968367_970914_+\|heterocyst-differentiation-protein-HetF	unknown	unknown	gnl\|CDD\|378942
CP026692.1\|AVH69667.1\|979868_980276_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69658.1\|965500_966232_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238017
CP026692.1\|AVH69656.1\|961954_962785_+\|squalene/phytoene-synthase	unknown	unknown	gnl\|CDD\|224478
CP026692.1\|AVH69664.1\|977491_977809_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69669.1\|981067_982816_-\|fasciclin-domain-containing-protein	unknown	unknown	gnl\|CDD\|225214

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH69663.1\|976470_977361_+\|hypothetical-protein	gnl\|CDD\|369035	pfam06682, SARAF, SOCE-associated regulatory factor of calcium homoeostasis. SARAF is as family of eukaryotic proteins embedded in the ER. SARAF is SOCE-associated regulatory factor, where SOCE is store operated calcium entry. ie a mechanism governing calcium homoeostasis in the cell and the mitochondria. SOCE involves the enabling of Ca2+ release-activated Ca2+ (CRAC) channels. SARAF is a single pass ER membrane protein whose systolic-facing domain is responsible for activity and whose luminary-facing domain carries out a regulatory function in conjunction with another membrane protein STIM, an ER single pass membrane protein that detects changes in ER Ca2+ levels through its EF-hand, conserved Ca2+ binding domain. STIM is the major target for SARAF regulation, and thus SARAF negatively regulates the SOCE entry of calcium into cells protecting them from overfilling.	5.4199e-06
CP026692.1\|AVH69657.1\|963256_964855_+\|serine/threonine-protein-kinase-SpkB	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.5296e-64
CP026692.1\|AVH69660.1\|973276_974113_-\|arogenate-dehydrogenase	gnl\|CDD\|180970	PRK07417, PRK07417, prephenate/arogenate dehydrogenase.	0
CP026692.1\|AVH69661.1\|974138_975746_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	1.26019e-44
CP026692.1\|AVH69655.1\|960419_960863_+\|4-hydroxybenzoyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	2.86186e-34
CP026692.1\|AVH69653.1\|957998_958796_-\|sulfite-exporter-TauE/SafE	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	4.07275e-25
CP026692.1\|AVH69650.1\|954818_955781_+\|cysteine-synthase-A	gnl\|CDD\|273463	TIGR01136, Cysteine_synthase, cysteine synthase. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff. [Amino acid biosynthesis, Serine family].	9.56108e-168
CP026692.1\|AVH69652.1\|957278_957941_+\|cadmium-resistance-transporter	gnl\|CDD\|226750	COG4300, CadD, Predicted permease, cadmium resistance protein [Inorganic ion transport and metabolism].	1.2532e-60
CP026692.1\|AVH69662.1\|975809_976400_+\|protein-of-unknown-function-DUF1517	gnl\|CDD\|369378	pfam07466, DUF1517, Protein of unknown function (DUF1517). This family consists of several hypothetical glycine rich plant and bacterial proteins of around 300 residues in length. The function of this family is unknown.	3.24792e-31
CP026692.1\|AVH69668.1\|980343_981009_+\|O-methyltransferase	gnl\|CDD\|366722	pfam01596, Methyltransf_3, O-methyltransferase. Members of this family are O-methyltransferases. The family includes catechol o-methyltransferase, caffeoyl-CoA O-methyltransferase and a family of bacterial O-methyltransferases that may be involved in antibiotic production.	7.98124e-83
CP026692.1\|AVH69654.1\|959694_960378_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.01087e-16
CP026692.1\|AVH69651.1\|956176_956863_-\|cadmium-resistance-transporter	gnl\|CDD\|226750	COG4300, CadD, Predicted permease, cadmium resistance protein [Inorganic ion transport and metabolism].	1.07196e-43
CP026692.1\|AVH69659.1\|968367_970914_+\|heterocyst-differentiation-protein-HetF	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	8.60629e-19
CP026692.1\|AVH69658.1\|965500_966232_+\|FHA-domain-containing-protein	gnl\|CDD\|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	2.1828e-19
CP026692.1\|AVH69656.1\|961954_962785_+\|squalene/phytoene-synthase	gnl\|CDD\|224478	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism].	5.13494e-56
CP026692.1\|AVH69669.1\|981067_982816_-\|fasciclin-domain-containing-protein	gnl\|CDD\|225214	COG2335, COG2335, Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane].	2.21875e-48

>CP026692.1|AVH69659.1|968367_970914_+|heterocyst-differentiation-protein-HetF
MTQEFHISVTPVGQNDYLVRTEQVAPGVPLAEELVTWPIADWLMAAGHLMNDPLNSVLQGDPFTSGGHESDIARNSVNLVALGQQFYNALFQGTLRDSWITAQGIAQNHQQVLRLRLGLKDTRLARLPWEVMHAGDRPLATGPYVAFSRFQSGILGASPLRSLRGATPTQNMPTPLEQVGVKVLMVIASPSDQVRLDLQKQEAIKLQAELHRQTSRSGEGRNRFPEIELTVLDQPGREELTQALEQGRYHVLHYSGHSNLGANGGEIYLVSRRTGLTEILTGDDLAGLLVNNNIQMAVFNSCLGAYIAASNSSGDTGERNLAESLVKRGIRSVLAMSERIPDEVALTLTQLFYRNLSQGYPVDLCVSRVRQGLISAYGSLQMYWALPILYLQPEFDGFLSQETEVSASTESLNQYSSPLGATSTMYSPMVDDSEIPLGMEDMIPSGLTRDSSGLDWLGEDTWGDLVDEIEYDDPSYEEDSAIVSDLFRQLDNQKAATEPDRQIRENSLHQSQISEEMTSSEESADLWGEVPPPPPATPGNLEENWQNSNFSRRHSPPQASQPPPPRNRTRRRQLWPIVGVVGISALAAAIGLNWWWQNRPQALPKIPEIPTQSLPDSRPIQKQPNIDLEIEATGIVTTTATEKLSQGDLQGGLLAVEELLNRGALAAAETSLKLIPSKQADDPSVNFYKGRLAWQSIQTGDNNYSVDDARRYWETAAKAKPESLLYNNALGFAYYTEGNLNRANDSWFKALNLALKEQNTNSTSRNTAVPQDALTSYAGLALGLYKSALSQSNGKQTQYLNEAIKLRQTVLKSDPENFQVDKLAKNWLWTEKAIEDWRSLLQEKGEEQ
>CP026692.1|AVH69658.1|965500_966232_+|FHA-domain-containing-protein
MTDFAQTEIERRLTLYQVFLKLYEHHSSLLDEILQLENLSQPSLKRVKAGYVHGVVDNTAVYLMTNLGDNQTQSLRQPQQIWTIGRNRNSGIYIADSHLSRRHAAIQHIDEQGFYLIDFNSTNGSFVNGNRALRPIKLKDGDRIRLGNMTFDFFVNYTYRVLPTVAMDLLMQLVHRRNNHTVDMLTYSPNRQKSLTEKSDSNLEAFRNFGYDNFSSEQKSEILDRLFTTQIPSNPSQITNWNF
>CP026692.1|AVH69657.1|963256_964855_+|serine/threonine-protein-kinase-SpkB
MSYCLNPTCSNPENLVYSQRCQSCGSQLLLRDRYQVIKPLGQGGFGATFLANDQGLPGEPSCVIKQLRPSGSAPHVLQMARELFEREAKTLGKIGNHPQVPRLLDYFEDHEQFYLVQEYISGDTLQEEVKLNGILSETGVKQFLSEILPLLQYIHEQKVIHRDIKPANLIRRTQDARMVLIDFGAVKNQISQSATSPSGQTALTAYAIGTPGFAPPEQMAMRPVYASDIYALGVTCIYLLTSKTPKDLDYNPNTGEMMWEQLVQVSDHLGNVLRKMLEVSVRNRYQSAVEVLRALEIEPYLDSLAKGLLIKSDNGSKERTHNYLENSAVLSNHPSTAVTSAGVAQVAAAIRARRAKTEAAGLHQGFGMAKSTTFTSNSNGSQVQNSKVGRKLDTQGLLTAYLKGRRDFALHNLNLLNLQGADLSQTNFHSAQLQKTNLQGANLHNSDFGRASLTRANLKDANLSKAYFNHADLEGADLRGADLSNAYLSNANLRGANLCGANLTSAKISDEQLALAKTNWMTVRPNGKRGLL
>CP026692.1|AVH69656.1|961954_962785_+|squalene/phytoene-synthase
MNLRRDALQILKETSRTFYIPISVLPPGLQEAVASAYLCMRAIDEIEDHPELDNATKAKLLRTISLTLQAGVDGFAVDAFFAGFSGYENSLEEVTLRIREWSLLAPDTIAPRIWDATAAMADRMAYWAERNWKIYTESDLDRYTFGVAGAVGLLLSDLWTWYDGTQTNRTQAIGFGRGLQAVNILRNHTEDLGRGVEFFPEGWSAEKMQEYARRNLGLAEAYIKDLPTGPALDFCQIPFTLANGTLDALANGKEKLSRSDVFALIEQLISVNMKAS
>CP026692.1|AVH69655.1|960419_960863_+|4-hydroxybenzoyl-CoA-thioesterase
MLVNNNLHRPLEVVLAIPVKTYDIDFMGIVSNIVYIRWLEDLRLKFLDEHWQLNQQIELGYTPILAGTEIEYKRPIKIIDRVIGRLWLSSLGRLKWTVQAEILSNNELAAVASQKGGFVNLQNNRLIPIPEELQKKYLQYQQGIQKI
>CP026692.1|AVH69654.1|959694_960378_+|TetR-family-transcriptional-regulator
MLVLSNHSVGNILFIAIFNSINSLLPTIKIAVMSKGEETKTRILQQAAELFNQQGYAGSSMSDIMRVTGLQKGGIYNHFQSKDDLALQAFDFAIARIKQHTRFALRSKHHAVERLQTIIGVFSTFAENPPIKGGCPLLNTAVESDDAHPALRERAQQAMNSWLHLICRIIEKGIEKGEIRPEVSADEIATIIIATLEGGIMISKLYGDSIHIHRVINHLIQYLETSL
>CP026692.1|AVH69653.1|957998_958796_-|sulfite-exporter-TauE/SafE
MHYLLLPFLSFFVGIIVGLTGIGGASLITPMLIFIFQVPPSIAVSSDVVAATLMKIVGSVKHWEQKTLDTEVVKWLAFGSIPGSLFGVGILHFIKYTGEYSLDNILLRLLGGMILLVTVLALVQLLLLTFFPKFNLPELPKLDLETNFGRFMTITLGAILGCLVGLTSVSSGSMFALVLIGFFRLDARKLVGTDISHAAILLLFTALGHLSLGTVDWSLVLPIWLGSVPGVLLGAKICQVAPQRPLRFIIYAILMMVSWKLVHQV
>CP026692.1|AVH69652.1|957278_957941_+|cadmium-resistance-transporter
MSQLGTAFSEGIIAFIATNIDDIIILLIFFSQVDVNFRRRHILLGQYLGFTAIIIASLPGFFGGLVVQREWIGLLGLLPIAIGIQQLVSRKEETITVQTVSSDFRQSTPTNPVLSFILSVLHPQTYKVAAVTIANGGDNISIYIPLFAGHNLASLGVILGIFFIMVGVWCAIAYFLSRQPTIADILSRYGNAVVPFVLIGLGLFIMYERGTFTLLPWVRG
>CP026692.1|AVH69651.1|956176_956863_-|cadmium-resistance-transporter
MNELVTAITTGSIAFIATNIDDIVILLLFFSQINANFRPRHIVTGQFLGFTVLLILSLPGLFGGLVLSKSWIGLLGLLPMSIGISSLVNREEDSSKEVVAGTEEGEASTIPSFFSPQVYSVAAVTIANGSDNISVYVPLFASSNLETFLVIIGLFFLLLGVWCYAAYKLINNRVIANVLTHYVNNLVPFVLIGLGTFIVLKSEALSPIKLAASCCCLTVLVKNDVASH
>CP026692.1|AVH69650.1|954818_955781_+|cysteine-synthase-A
MRIAKDITELIGRTPLVQLNKIPQASGAVARIVVKLESMNPASSVKDRIGASMVEAAEEAGLIHPGKTVLVEPTSGNTGIALAMVAAAKGYHLILTMPDTMSHERRSMLKAYGAQLELTPGVEGMRGAIAHAEQLVAQTPNAYMLQQFGNPANPKVHAETTAEEIWNDTDGEVDILVAGVGTGGTITGVAEVIKKRKPSFQAIAVEPSNSPVLAGGKSGPHKIQGIGAGFVPAIYRSEVVDEVIQVADEQAIAYSRRLAKEEGLLSGISTGAALYAAIQVAQRPENAGRLIVMIQPSFGERYLSTSLFKDPEENEWLSKV
>CP026692.1|AVH69660.1|973276_974113_-|arogenate-dehydrogenase
MNIGILGLGLIGGSLGFDLRSQGHHILGVSRREATCQKAVTLGSVNEASVDLSLLAAAEVVFICTPLALIVPQFEQLVAYLPTATVVTDVGSAKAQIVKDISPLWDNFIGGHPMAGRTDSGIEAAQRDLFVDKPYVLTPITTTPTSAITVVEEIVRSLGANIYFCQPEQHDRAVSWISHLPVMVSSSLIAACLSETDPDVLQLAQKLASSGFRDTSRVGGGNPELGVMMARYNRQALLRSLQQYRQNLDELTNLIEQENWPVLEEKFKSRQQARPDFV
>CP026692.1|AVH69661.1|974138_975746_+|pentapeptide-repeat-containing-protein
MTLPTIKVGIQGVASMTVEELLEQYAAGVLNFSGVDLPEANLSGVKLSGVNLSDANLSIVNLSGANLSEANLSNAKLNVARLSGANLCSAILNNASLNVANLIRADLSRAQLRGASLIRAELIRADLSRADLLEADLTSADLREATLRQANLRHANLSETILKGASLTGANLEMANLNASDLSRSDLSGANLRDAELRQANLSHTNLSGADLSGANLRWADLSGANLRWADLSGAKLSGADLIGADLSNANLTNTSLVHANLTQAKLIRAEWIGADLTGATLTGAKLYATSRFGLKTEGMVCEWVDLSPAGDRSIVQNFHSEESRDFFNETPPTIRIIVDAVLEHEANFAIAGAYYQIAQEYRGLKQPPSIESGRRRTVFTFHVDSDEALFPTAYIVILPFLDAASTQKNISSIVEMINSEVVANQNFKSPHIVKQLNTLFEQAMNQATTIKQMKKNIEVAVKLNFCKAPAQIVLTNSSAHTLIVYDHPNFGKRFINRSPLNASAYDMSSDSTKNILPSLDIIIDFVKGFHYISH
>CP026692.1|AVH69662.1|975809_976400_+|protein-of-unknown-function-DUF1517
MSNIFNKMIGRTRYVVFRLFLHLGGGEVAPILGVLNSAGRDAIDADGDLEVLGEGLVEISQTLLQYDEYWLSAANEGDVFWNEGEAGDYVNELFTDSAERYLSEPNYASNGLNEPLSIPVTRNIIVMITVAYEGEVPDLETDLSNVQALKEGLKALINLHYKHRLKAIQVHFSPAQLGDELTSDQLLQYYPELIPL
>CP026692.1|AVH69663.1|976470_977361_+|hypothetical-protein
MIMTIVRKFTAVFLAMSLCLTTVACGAGEQNTTTPPAKNVSQTSTNTKLSDGQYQIQQATYDDATGEYSLFLLNNNPPTFATENLQMARLTDDEIKQGKKTYLKVEKGQPILYLTEDFKIEYVHNVTENKTNPQTGQQETIVVRRENNFWAPFAGSVAGSLAGQAIGSMLFRPQYYVPPAYYPGQGLSGFGGYGGSYGQAIQSYQTRYNAPPAAVTNRTAFRNTGTIRRSYPGNSNIRNTPRSTTGNNRPSGSGFGGSTLRPSGRATSPRRNSGSGFGSGRSTAPRRSSGFGSRRR
>CP026692.1|AVH69664.1|977491_977809_-|hypothetical-protein
MISEAHITSGVLTVNQIQLTLTIGYLLMTCYFLTNWLIFSLRHSASNPEDKFLSFVMFVVATIFWPLMIPMSCLEMVQQKRIDFSKMIPVLLAIFVFSISYYLTE
>CP026692.1|AVH69665.1|977970_978744_-|hypothetical-protein
MYINFFIGSIIGIVVPVLVAFGLLQWLHIPTGNFLDWVIGGASFWWLLVIVTVPWNVHFQAKEVLAEAAQSTEKGIPVDEKQVKYVTVLAKRSLWVAIALHLFSTVGLYTLAATGISTVGYISSGAALLLTILRPAIRAYEYLYARLAMIRQEWKYPREDIFELRDRFSILEQKIQSLEDQLNPEQPYSLSATQQRFAEETRRDLARIAANLEELRATNQTEHERLGREARNAIAQLSTDGQFLDHVREIIRFFKTA
>CP026692.1|AVH69666.1|979168_979858_+|hypothetical-protein
MSIFFFNQKIPKLFTKLSVATAKTAFSLILLFKIDSAQAFAAKFNIDPSASIISSYTFSPDSVPFSLTDLGINSGDTIKLERFGSFSPFGDPTDEYFGAMWATFSIDNKLLPSSGTYNGATTDRVPGAINAILPNGCLPFQCLNNSIFYISRVDFNGAIVQVPIDAKFIFIGAADSSFADNVDSNKDFAVGINSVSTASVPEPNFVSALLAFGVCATGLQFLRNQKKAL
>CP026692.1|AVH69667.1|979868_980276_-|hypothetical-protein
MVRLVLITILLVLVTACGSIGLLPTSDLVQKAIAFGLEQTQQKLSQQLDLDFQGFEIKRLSITQEQPLTIDNLPAFRVRGTYDLIVKLPKRRLTQPKKPFDVYLQIQQEGKTWRLLLAEKGSKDSQSIWRSYLIE
>CP026692.1|AVH69668.1|980343_981009_+|O-methyltransferase
MPKQSIGLDNQLYNYLLSVSLREPEILGKLRQETANHPRSGMQISPEQGQFMSLLVQLIGAKKTLEVGVFTGYSSLSVALALPADGQIIACDVSEEFTAIARRYWQEAGVADKIDLRLAPALETLERLLATGQAETFDFAFIDADKQNYDGYYERSLQLVRPGGLIAIDNVLWSGQVADEQNQDESTQAIRAFNEKLHHDERISLSLVPIADGLTLAIKRP
>CP026692.1|AVH69669.1|981067_982816_-|fasciclin-domain-containing-protein
MSSLSRWSSTKVALLVLGMTAATITPIVISAPASSQTPVPSATPSPETPSPATPSPETPSPATPSPETPSPATPSPTSTVNLSDVSSDYWARPFIQALAENNVISGFPDGTYRPNQPVTRAEFAALIQKAFSNQNRVRQLSAGGFSDVPANYWAAAAIQSAYETGFLAGYPGNVFRPNQEIPRVQGIVALSSGLGLTGGDTSTLTNFYNDASAIPEYAVGSVAAATVGNLVVNYPDVKQLNPQQSLTRAEAAALLYQALVKQGRVQPIASNLPASQYVVAGTPVSTDIVSLAASSSSFTTLTSLLKTAGLADVLQQPGPYTVFAPTNDAFAALPAATLQQLEQPENREALVKILRYHVVPGAVTASQLSAGKLTTDEGRPVNIKIDSASSQVSVNDAKVLQADVKASNGIIHAINQVLIPPDVNISKLNQPPTGSTTPDVNVGRSTRGGRSYIGVGGNIGLSGDDTALSDTNFTVISKLGLTNNISVRPSVIFGDDTVFLVPVTLDFSPRRAGSVGERSFAISPYIGAGIAIEANADTDIGLLLTGGVDLPLGSKLTLTGGVNAAFVDDTDVGLQLGIGYNF

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Crispr_ID: CP026692_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_7

1387145-1387269

Orphan

Consensus_repeat	Method
CAATGCCAATGCGAGGGCTTGCATTGTTAATGCATCGGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026692_7

>merge|CP026692|7|1387145-1387269|CRISPRCasFinder
CATTGTTAATGCATTGGCTTACAATGCCAATGCGAGGGCTTGCATTGTTAATGCATCGGCTTACAATGCTAATGCGAGGGCTTACAATGCTAATGCGTCGGCTTGCAATGCTAATGCGAGGGCTT

>CP026692|7|7|1387145-1387269|CRISPRCasFinder
CATTGTTAATGCATTGGCTTACAATGCCAATGCGAGGGCTT	GCATTGTTAATGCATCGGCTTACAATGCTAATGCGAGGGCTTA
CAATGCTAATGCGTCGGCTTGCAATGCTAATGCGAGGGCTT

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH69957.1\|1379241_1379724_+\|protein-of-unknown-function-DUF4168	unknown	unknown	gnl\|CDD\|379360
CP026692.1\|AVH69963.1\|1389437_1389914_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69961.1\|1387867_1388227_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69950.1\|1370853_1371633_-\|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|184593
CP026692.1\|AVH69954.1\|1376086_1376872_+\|RDD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377640
CP026692.1\|AVH69952.1\|1374140_1375115_-\|transmembrane-protein-of-unknown-function-DUF95	unknown	unknown	gnl\|CDD\|224219
CP026692.1\|AVH69965.1\|1392660_1392957_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69955.1\|1377010_1377799_-\|2'-5'-RNA-ligase	unknown	unknown	unknown
CP026692.1\|AVH69966.1\|1393179_1395288_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
CP026692.1\|AVH69962.1\|1388230_1389445_-\|natural-resistance-associated-macrophage-protein	unknown	unknown	gnl\|CDD\|334596
CP026692.1\|AVH69968.1\|1398405_1399416_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69958.1\|1379960_1384349_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP026692.1\|AVH69951.1\|1372292_1372964_-\|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|172748
CP026692.1\|AVH69960.1\|1387529_1387868_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69953.1\|1375195_1376041_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH69969.1\|1399420_1399870_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234701
CP026692.1\|AVH69956.1\|1378142_1379132_+\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|180982
CP026692.1\|AVH69959.1\|1384536_1386936_-\|alpha-glucosidase	unknown	unknown	gnl\|CDD\|224418
CP026692.1\|AVH69964.1\|1391483_1392374_+\|Mo-nitrogenase-iron-protein-subunit-NifH	unknown	unknown	gnl\|CDD\|237312
CP026692.1\|AVH69967.1\|1395821_1397948_+\|glycogen-debranching-enzyme-GlgX	unknown	unknown	gnl\|CDD\|131155

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH69957.1\|1379241_1379724_+\|protein-of-unknown-function-DUF4168	gnl\|CDD\|379360	pfam13767, DUF4168, Domain of unknown function (DUF4168).	4.71423e-20
CP026692.1\|AVH69950.1\|1370853_1371633_-\|phosphate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|184593	PRK14258, PRK14258, phosphate ABC transporter ATP-binding protein; Provisional.	0
CP026692.1\|AVH69954.1\|1376086_1376872_+\|RDD-domain-containing-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	1.10265e-18
CP026692.1\|AVH69952.1\|1374140_1375115_-\|transmembrane-protein-of-unknown-function-DUF95	gnl\|CDD\|224219	COG1300, SpoIIM, Uncharacterized membrane protein [Function unknown].	7.36282e-48
CP026692.1\|AVH69958.1\|1379960_1384349_-\|histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.42021e-45
CP026692.1\|AVH69966.1\|1393179_1395288_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.55272e-62
CP026692.1\|AVH69962.1\|1388230_1389445_-\|natural-resistance-associated-macrophage-protein	gnl\|CDD\|334596	pfam01566, Nramp, Natural resistance-associated macrophage protein. The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functional related proteins defined by a conserved hydrophobic core of ten transmembrane domains. This family of membrane proteins are divalent cation transporters. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. By controlling divalent cation concentrations Nramp1 may regulate the interphagosomal replication of bacteria. Mutations in Nramp1 may genetically predispose an individual to susceptibility to diseases including leprosy and tuberculosis conversely this might however provide protection form rheumatoid arthritis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others it is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals. The yeast proteins Smf1 and Smf2 may also transport divalent cations.	8.13148e-53
CP026692.1\|AVH69951.1\|1372292_1372964_-\|phosphate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|172748	PRK14260, PRK14260, phosphate ABC transporter ATP-binding protein; Provisional.	1.40286e-158
CP026692.1\|AVH69969.1\|1399420_1399870_+\|hypothetical-protein	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0.00520566
CP026692.1\|AVH69956.1\|1378142_1379132_+\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|180982	PRK07452, PRK07452, DNA polymerase III subunit delta; Validated.	0
CP026692.1\|AVH69959.1\|1384536_1386936_-\|alpha-glucosidase	gnl\|CDD\|224418	COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism].	0
CP026692.1\|AVH69964.1\|1391483_1392374_+\|Mo-nitrogenase-iron-protein-subunit-NifH	gnl\|CDD\|237312	PRK13236, PRK13236, nitrogenase reductase; Reviewed.	0
CP026692.1\|AVH69967.1\|1395821_1397948_+\|glycogen-debranching-enzyme-GlgX	gnl\|CDD\|131155	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0

>CP026692.1|AVH69959.1|1384536_1386936_-|alpha-glucosidase
MPQYFGKLPTTNQPWTTVSNVKAVTWDNNIINFDCGDSRLTISVLAPNLIRVRLALTGEFIPRRSWAVTLDDAEWTTTPFTVQETEATVEIETAQIRVCVQREKCRIACFDKDNRPFAQDAEMGIGWRMGAVAGWKEIAADEHFYGFGERTGFLDKLSEVKTNWTTDALDYDALTDEMYQAIPFFMALRPQVSYGIFFNTTFWSQFDIGAEQPGIWKMETRGGELDYYIIYGPEPAQILDTYTQLTGRMPLPPKWALGYHQCRWSYESETVVRELAKEFRQRRIPCDVIHLDIDYMRGYRVFTWSPQRFPNAAKLISDLAQDGFKTVTIIDPGVKYEPEGNYHVFDQGIENDYFVRKADGTLFHGYVWPEKAVFPDFLRPDVSNWWADLHKSLTDIGVAGIWNDMNEPAINDRPFGDEGEKIWFPLDAPQGGREAGEAGGERDNSQSKIQNPKSKIDVTHTEVHNLYGLMMAKASYEGLERHRGSERSFVLTRSGYAGVQRWSSVWMGDNQSLWEHLEMSLPMLCNMGLSGVGFVGCDIGGFAGNATAELFARWMQVGMLYPMMRGHSAMSTARHEPWVFGDRVENICREYINLRYQLLPYIYSLFWEAATTGAPILRPLLYHFPNDPKTYSLYDQVLLGASLMAAPIYRPGVEHRSVYLPAGTWYDWWSGDRYEGPIHILAHAPLERMPLYVRSGAIVPMQPVSQYVDQAPLDEIRLRIWCGNNEYQLFEDDGQTNEYQDKKISLTNISVFTEKNQTVVEIGARVGEWTPPPRQVIVELVGIGEQRFQDDGKRHTLQF
>CP026692.1|AVH69958.1|1379960_1384349_-|histidine-kinase
MLNINRLQLQDISKMPTNSLVAKVASAIAVFVGSLVLVGWCLGIEVLKRGFPGSPATMKVNTALCFVLCGVSLSLFLKGEQGSRGAGKQRSRGERTIQNYPHSSTAPLPTLTLLISQVCAIAVTTIVALTLCEYLFGWNLGIDELVFRDSRTSIATLYPGRMGVNTALNFILVSVALEILIHPKTHRSYWYAQIIALIATLISFQALMGYAYKVKVLYGLAPYTTSMALHTAVLFLLLSMGILWVRADQGLMRVVTSDSYGGLLARRLLIAAIAVPFILGWVIVEGQRAGQYDPAFAVSVFAIVLIVIFTILIWQSARVIERLSYQRDLAQKALRTYEAKLGSFVDANVIGILFGDVDGGIQQANDELLRMIGYTREDLLAGRLSWRNITPPEYLYLDERGVAEAQGNTNAACTPYEKEFICKDGSRIPVLVGYVLLGENREESVAFILDLSERKQAEAEQQKLASLVENSSDFIGIATLEGQLLYINDAGQKLVGFTNLSEVRQKAVLDYFMPKDKAYFQEYILPTVLSEGCWQGEFCFRHLQTGQPIPVDYNIFTVTDNNTGQPIALATVTRDISEQKQAKEQILQLNRDLQRRITELQTLLEVIPIGIGIAEDPECQNIKVNPAFGKQLGISSDTNGSLNAPVDERPTSFKIYREGRELSTEELPMQYSATHGVEILDCELDVVHENGKIVKLLYYVAPLFDEEGKTRGSVGAFLDITERKQAEEVLLNQQKWLEDVLNLMPRPLLFIEPGTARVTFANRSADELAGGEFPKGVPAVDYHTVYHYTDAIASRIPNELMPGVRVARGERLNGLEVDWHTPAGVRSLLVFADTLPAMHGHPATCILVFQEISNLKQAEKALSLGYKRLKLLFDTANDLLSSQEPVLLIDSVYQKLRDQIGLDIYFNYLVEDNSQVMRLESYSGISQEMVQEVEWLTFGQGVSGGVALSRHPIAVENVQQSTDLQTELIRSLGITAYYAYPLLAQGRLLGTLSFGSRTLLSFTDNQKGMMQAVCDQIAIAMERASLIAFLQQQTEQLQEANRMKDEFLGILSHELRSPLNAILGWAQLLQRSKLSDTQMARATETIERNAKAQTQLIEDLLDISRMSRGKLRLDVRTCNLVLIIESAIETVSLAAQSKEIDLRFSLIPSKETRNAPPGILPVVTIEPNSDWGLGVNRENLEFSAAQSQINQHSEDSKLGENSQFLVSGDFERLQQIIWNLLSNAIKFTPVGGRVEVQLSVISGQEKQQTTDKYAQIQVIDTGIGISPNFLPYVFDRFRQADSSNTRIYGGLGLGLAIVRHLVELHGGTVHVNSPGEQQGATFTVKLPLLKNSSLLSLLGVRVLVVDEQADTREFITTVLEQYQAEVKAVASVSEALQLITQWKPNALVSDISMPQEDGYSLIHKVRSQPPELGGNIPAAALTDDTKEEDRLRAIQEGYQLHLPKPIKAAELATVIASLVGRT
>CP026692.1|AVH69957.1|1379241_1379724_+|protein-of-unknown-function-DUF4168
MKKISDLFSRTSRKRILSQSLFFGAIASVSVISNAFSFSSKAEAQTPPPIVNNTEIDSYAQAVLAMEPARQNAFEEIKKLIGNGEIPQIVCNDSNSINGLPKKAQDIAVNYCNHAQKIVEDNGLRFEQFNKITIELQNNTILKSQVYNTLLRLQQPPESR
>CP026692.1|AVH69956.1|1378142_1379132_+|DNA-polymerase-III-subunit-delta
MPIYVYWGEDDFAMEKAIAVLRDRVLDPQWTSFNYTAFSPDRSDAPIQGLNQVMTPTFGAGGRLVWLINTTLCQHCPENVLAELGRSLRVIPENSFLLLTSRNKPDERLKSTKLLKQFATEFREFPLIPPWKTELLVQSVNQAAQTVGVKLTANTAHLLAESVGNDTRLLYNELEKLRLYAQGSNKPLDTDTVTKLVRNTTQNSLQLAAAIRTGDTAKALTTLADLSNASEPGLRIVATLIGQFRTWLWVKIMIESGERNQQAIAIAADIGNPKRIYFLQQEIKLLSVQQLISCLPLLLELEVSLKQGASEMSTLQTKVIELCQVCRGN
>CP026692.1|AVH69955.1|1377010_1377799_-|2'-5'-RNA-ligase
MDDNYQTYLNRLARLTLPEAYRSQAQHIQESSKFQLDSGLRQAASFPGYTLITPPPEEESQNSAFYAKLQTYQQELLQLPVNRNLIVPVPPASFHLTLADLIWDNAYLDAYEKNPKFDEELHSCLAEIFQRYQQLMTNRSHPIKWQMLGLILMPRAVAICLVPQDERCYEEIIQFRRTIYQNPKLIALGIEQHYHFTAHVTLAYFGEVPSDLDRISFSTMLSQLNEQWLLNLPEFLIDRVELRKFDNMTRYYRESDWPILDF
>CP026692.1|AVH69954.1|1376086_1376872_+|RDD-domain-containing-protein
MRFFNRITFQTPESVELEFTLAGIGNRALALLIDYTVLGITLLLFVLTWSVFSTQLLNFVEYFFTNLPSLDIWLLAIFFIIAFAIYIGYFVFFETLWFGQTPGKRVAKIRVVRDDGRLIGLQQATLRALLRPFDETLFIGAFLIMLGSREKRLGDLAAGTIVIQAQTPTASAKLTISEQAKGLHEQLIEIADFSQLMPDDFAVIREYLQRRAAMSLKARASLSLKLAEQVKAIIHLEKLPEAVTPDVFLEAIYLGYQQPEF
>CP026692.1|AVH69953.1|1375195_1376041_+|hypothetical-protein
MSENFGSSGQIQPLSIGNVVSAAVRLYRSHLKTYLNLAAIAHLWILVPVYGWAKYAAISGLISRLAFGELIYQPEGVQTARSHINPRLWSFLRLALQVGISLLVIYIGLAIVGAVLGGLIGGVLGGVLGVSASITATIMGVIVTVVLVLLGLTWFYSRWIVAEVPLAVEENINGGESVARSWELTKASVFRIQGIVLVAFIVTMPLVFVLNYIPSLFLIRLEPGTAIYSIVYLISVIGSLIGGVLVMPFWQALKAVLYLDLRSRREGLGLQLREPPSQDFR
>CP026692.1|AVH69952.1|1374140_1375115_-|transmembrane-protein-of-unknown-function-DUF95
MNIQRWIARREPNWQRLDALLRQIEKKGLKSLGAAEIRELASLYRSVTADLARARTQQIGNTSIQSLQSLTTRAYTQIYQGSRRQEWQAILEFYRWGLPSVVQKTFVYIAAATALFLLGALVAWWYSWQNPSFMPLIVPESLITKVRDEHKLWMGSIVGVEPLASSGIAINNLLVSFGAVAGGMTAGAYTAYLMIFNGLLIGAVGTLVGQNNLAYPFWAFVFPHGSLELPAIFFAGGAGFLLARAILFPGKYRRGDALKFYGYQAVQLVFGIVPMLIIAGAIEGFFSPNPSVPEPIKYLAGIGLFILLVLYCNRKQTGNNLDGG
>CP026692.1|AVH69951.1|1372292_1372964_-|phosphate-ABC-transporter-ATP-binding-protein
MVQEPSGCGKSTFIKILNRISELEGPVKVEGSVEFFGQNIYDPRVNINRLRRQIGMVFQKPNPFGISIYENVAYGMRIAGRYSKLKLDEIVESALHSAALWDEVKDKLDKSALGLSGGQQQRLCIARALAVKPKVLLMDEPCSALDPIATMKVEELLHSLQSELTIAIVTHNMQQAARVSDFTAFFSTDESRIGQMVEFGATEQIFNNPLDPRTRDYISGRFG
>CP026692.1|AVH69950.1|1370853_1371633_-|phosphate-ABC-transporter-ATP-binding-protein
MSKLIPAIRVKNFSFYYETKKIVEGVSMDIYQNQVTAIIGSSGCGKSTFLKSLNRMSELEGDVRVEGRVEFFGQSIYERRVNINRLRRQVSMVFPKPNLFPMSVYDNVAYGVKLVGWYPKVELDGIVESAIKAAELWDEVKNKLHKSALELSGGQQQRLCIARALAVKPNVLLMDEPCSGLDPMGSMKIENLIHNLRSELTIVMVTHNIQQVTRLSDFTAFFYSNENRITQMVEFGTTNKIFTNPVDSRTRDYVFARII
>CP026692.1|AVH69960.1|1387529_1387868_-|hypothetical-protein
MTTREIHLELLLSKPVLDSTGKAVGRIQEVRAEQQGEEWIVKEYLIGYAAVLERLSAWTIGLKILHLLGARKIYGGYTIPWDKLDLTDPDKPRLRCSLDALKSLDEQPQDTE
>CP026692.1|AVH69961.1|1387867_1388227_-|hypothetical-protein
MDVIRDVLDNQLVDRNQRKMGKVDGIVMELQDGQPPRLAYIEVGVTTLSKRLNPRLAGFVAAIASKWGAKQSQPFRIPWSKVRDIGIDVEVDVEAEATPALGYEKWLRDRIIARIPGGG
>CP026692.1|AVH69962.1|1388230_1389445_-|natural-resistance-associated-macrophage-protein
MNKILEIALGIVTSIGGFLDVGAIATAAEAGSTYNFQLIWAFVLGTICVIFLVEMSGRLAAVSKHTLAAAVRERFGFNFYIIPLVAEIVVDFLVLAAEIGGVCIALQLVTGISFQWFALPVAFAIWLLLWKGTFGLIENGISLLGLITLAFVVATFKLHPSLTQLGSALLPTLPQQDTAHYLYLAVGILGALISPYLFYFYSSGAVEDKWDEGYIGVNRAVAGLGMGFGSIVSLGVLIVAALVLGPKGIQVDSYEQAALMLTETFGYWGFVLFAASLGIACFGAALEVSLDTAYIVAQAFGWNWGENLKPKDAARFSLVYTVFVFLASLLMVFGIDPLQLTLFSMAITAVILPPVIIPFLVLMNDELYVGKYRNGWISNSVVIFTIALTFVLAIVAIPLEIIGG
>CP026692.1|AVH69963.1|1389437_1389914_-|hypothetical-protein
MLAMESVKMPEPSKLGSIINCLLILTLLASCSGKNSAEDMDKEIQSISSWVATANMVGDAWIRGTVPNKYAEKTLERATEELQKEKSKIDKIKLSKDVSEHDRSLLLAEVLQLANKTEEMSRAVAKKNHSEVQQKLGELAVEKHSLNKLRKVAGQTNE
>CP026692.1|AVH69964.1|1391483_1392374_+|Mo-nitrogenase-iron-protein-subunit-NifH
MTDPKIRQIAFYGKGGIGKSTTSQNTLAAMAEMGQRVLIVGCDPKADSTRLMLHSKAQTSVLQLAAERGAVEDIELEEVMLTGFRDVRCVESGGPEPGVGCAGRGIITAINFLEENGAYKDVDFVSYDVLGDVVCGGFAMPIREGKAQEIYIVTSGEMMAMYAANNIARGVLKYAHTGGVRLGGLICNSRNVDREIDLIETLAKRLNTQMIHYVPRDNIVQHAELRRMTVNEYAPDSNQANEYRTLGTKIINNKNLTVPTPIEMEELEDLLIEFGILESEENAAMLVGKTATEASV
>CP026692.1|AVH69965.1|1392660_1392957_-|hypothetical-protein
MRARIENKILFIHHEDLPEFKKGGSVVRNSYFWALRSIAGQASRYRDWEYEPEVWLALSRMLLSFAESGYLGIRETLLEFPLSQGEIPNFLRDVSTWE
>CP026692.1|AVH69966.1|1393179_1395288_-|TonB-dependent-receptor
MKENVKKNFLLLTVALPSLLIASPSYAVESEIEQRNTNKSTEVISDIPSLSEIELPTTNAELLTQQSVPSEVNPEETQPETEQTPSDDADISIEAIAEPDNLPQSTPTYVIDREEIEKQGATSLADILKRMPGFAINDVGHGADTHTGTYYRGASINQSVFLINGRPINNNVNTYHGGTDLNSIPVEEIERVELYSGTASALYGSSAFGGVVNIITKEGYGKPKLSGSAEFGSLNLNNQQVSYGGSSDKVKYNFSFERFFTDNRYPVPVGAANRDEKGFLSNADTATSTYFGSIGLDLDQKNSLSLDVTALSSRRGLIYFGFPLQRDRLDHDGLNIGLSWKTRLGNGESSNITTSIGYNQDYFSTYGPTGAFYRTGALDTQQLTARVDHEWKITANNKLRWGLDLKNTDLTGDVLSTNPSTIANNETENRSLFNTALFAVNTWNISDNFLIDLGLRQSFDSQFGNYLNPSVGLRYAVTPIVAVRGSWAGGQRNPGLDQLYVYDTVHGWEPNPDLSPEIGSTWTAGVDVNFSENLIGQFTYFGSSIGDRLGVIAGKWANIGLVDTNGLEAALQLKIAAGWSTFLNYTYTDSQIKTGTEKGLQLGLIPYSVLQTGVGYQNSGWQANLYVTYNSGARRSIFANPTDKPTDFAPSFVNLDLSGRIPLTSNLGLTVYLENLLGEQYERVNRIYSPGFTFRVGLSANF
>CP026692.1|AVH69967.1|1395821_1397948_+|glycogen-debranching-enzyme-GlgX
MYLALWPGNVYPLGATWDGKGTNFALFSENATGVELCLFDNDDEEIRIPLTEKNNFVWHGYLPGVGPGQKYGFRVHGMWAPEVGHRFNPNKLLIDPYAKAIDGEFSNDPSLFGYSLDAEEKDLVFSELDDAKIMPKCVVVDQSFDWEGDKLLATPWYRTVIYETHVKGFTKLHPDIPEELRGTYAGLAHPAAIQHLLQLGITAVELMPVHHFLSHPGHLEGKGLSNYWGYDSINYFAPYSSYSASGTVGEQVTEFKQMVKALHFAGIEVILDVVYNHTGEGNHFGPTLSLRGIDNSVYYRLVKDDPRYYTDFTGCGNSLNVRHAQVLKLIMDSLRYWVIEMHVDGFRFDLASALARELYEVDNLSAFFDIIHQDPILADVKLIAEPWDLGEGGYQVGNFPLRWSEWNGRYRDTVRDFWRGVDDSLGQFAYCFTGSPDLYQTNGRNPNASINFITAHDGFTLNDLVSYNEKHNEANGEDSRDGESHNRSWNCGAEGETDDTEVIRLRERQRRNFLATLMLSQGVPMLLEGDEIGCSQKGNNNVYCQDNEISWRHWDLHKANSDLLDFTRELINFRHQHPVFRRRKWFQGRPIHGLGINDIAWFNSDGSEMTEKQWLISYAKVMEIFFNGQGIATPGDRGERIIDESFLLFFNAHYELIDFALPHEFKDKVWEIVIDTNEPRFLDRGKFVSDSQTVPVTDRSLMVLRLIS
>CP026692.1|AVH69968.1|1398405_1399416_+|hypothetical-protein
MFRQKLAFKVLVPLVLVLGGCGRSADIEAAKSLSRVGQEADVVFEKIADDFYQSCLRAADYTPLKSSNTEGINQDRITAEKECYENPQVEQNSLDSVNHKPTPKDASQALTNGNQVIINYLIALGRLASDDLINYDPQLNSIEDSLKQIPEIKTDVVGAGTAIAQFLFRVFSEQERRSTLKDAVLANDQNLTSYIDGFSNAINKGYSKGALESEKLAVDNYYKSYLGRIININTANSSNLEGISVVFRDKTTLELDQEWKTTKSTLVEKQKIADLYVEILKEISQDHHTIKEMYQKDEKPSSTQIRKMVKTYVKKLDKLVEQSNKVFKDNVTSNEK
>CP026692.1|AVH69969.1|1399420_1399870_+|hypothetical-protein
MSQELSADDLHEQAKRYREIAMAIQDKRDILQRRIKDLKEDKAPKEEIKDLENKIEFLNEQNQRLMNTAKSLDAQGVVKVMTNLENAKQRIEAITDKVLKAVQKFDDIKEALNVLSPFINLATAIATGGTVVAKIDSIVSELDNLTRNV

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Crispr_ID: CP026692_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_10

1927161-1929063

Orphan

I-D,II-B

Consensus_repeat	Method
ATTGCAATCAACTAAAATCCCTATTAGGG----------ATTGAAAC	PILER-CR
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CRISPRCasFinder
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CRT

26 spacers

The CRISPR arrays of CP026692_10

>merge|CP026692|10|1927161-1929063|PILER-CR,CRISPRCasFinder,CRT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACACTTTCGGAGATTAGAAGGCAGGAATACTACAAGATATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACAGATTTGATACTTAGTTCACTCTCAAGGAGCATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACGGTGAATTAGAATTGCGCCTTCGGATTTTTAAATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACTGGAAGCTTGGGTTTGGTGGAAGCAGGGGGCAAAGATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACTTTGAGCTTGAATTGGGGACTCCACACGCCGCGTACTATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACTAAAAATAAAAGCTAATGTTGGAGGAGCGATTAAAGAAATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACACTGGCTGAAAAACTGGCCGCCAATTACCGCGAATTACATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACGCAAAAAACACCGCAGCCGGGACGCTTGTAACAGGTGAATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACGATAGGGGGCCACCGAAGCATTGATAAACCTCCCTATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACCCAATTTCTTATGCTTACTTTAGCACCAGTTAAGAATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACACTAATAGTTACTGGCAAACATCAGATAACTGTATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACTTTTATGCTAGGAATTATATTTTGAGAAAAATTAATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACATGAACCTGTACTTAGAAGCATTGTGTCTCGCATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACTAATAGATTCTTGCAGTTGGCGTGATACTGTGCAATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACAATACCTGGTACCAACTTTAATAAACATGGTAACAAATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACGGTAACAAGTTTATTAAAGGTATAATTTTTCTAAATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACTTGTCTTTGGCGGGGTGCAATCTGCAATTATTGGGATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACCTCTCCGACTATGCTAAAACCACTGGAATGCACGTATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACAGGATCTACATCCTCAGCAATCTTGTTTTCTAATATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACAGTCAGCTATCAGACGAAATTGATTGCTTAAATGCATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACTTTTTCTGTGGGTTCCTTCAATACGCCTAAGAATATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACGCTTACTAGAGGGGGCTTTTATTGTAGAAGATTTGATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACGCGTAAGAATGCGGTTTTAGATTTGTCATACAATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACCCTTATGACTACTGCGATCGCTAAAAAAGTAACATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACAGCTTATCAGTATAGGTTAATGGCTGACGGCGATTAATTGCAATCAACTAAAATCCCTATTAGGGATTGAAACCCTTCAATACGCCTAAGAATGGAATGAAAGCCTCTAAATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC

>CP026692|10|3|1927161-1929063|PILER-CR
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	ACTTTCGGAGATTAGAAGGCAGGAATACTACAAGAT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AGATTTGATACTTAGTTCACTCTCAAGGAGC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GGTGAATTAGAATTGCGCCTTCGGATTTTTAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TGGAAGCTTGGGTTTGGTGGAAGCAGGGGGCAAAG
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TTTGAGCTTGAATTGGGGACTCCACACGCCGCGTACT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TAAAAATAAAAGCTAATGTTGGAGGAGCGATTAAAGAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	ACTGGCTGAAAAACTGGCCGCCAATTACCGCGAATTAC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GCAAAAAACACCGCAGCCGGGACGCTTGTAACAGGTGA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GATAGGGGGCCACCGAAGCATTGATAAACCTCCCT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CCAATTTCTTATGCTTACTTTAGCACCAGTTAAGA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	ACTAATAGTTACTGGCAAACATCAGATAACTGT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TTTTATGCTAGGAATTATATTTTGAGAAAAATTA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	ATGAACCTGTACTTAGAAGCATTGTGTCTCGC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TAATAGATTCTTGCAGTTGGCGTGATACTGTGCA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AATACCTGGTACCAACTTTAATAAACATGGTAACAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GGTAACAAGTTTATTAAAGGTATAATTTTTCTAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TTGTCTTTGGCGGGGTGCAATCTGCAATTATTGGG
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CTCTCCGACTATGCTAAAACCACTGGAATGCACGT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AGGATCTACATCCTCAGCAATCTTGTTTTCTAAT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AGTCAGCTATCAGACGAAATTGATTGCTTAAATGC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TTTTTCTGTGGGTTCCTTCAATACGCCTAAGAAT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GCTTACTAGAGGGGGCTTTTATTGTAGAAGATTTG
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GCGTAAGAATGCGGTTTTAGATTTGTCATACA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CCTTATGACTACTGCGATCGCTAAAAAAGTAAC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AGCTTATCAGTATAGGTTAATGGCTGACGGCGATTA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CCTTCAATACGCCTAAGAATGGAATGAAAGCCTCTAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC

>CP026692|10|9|1927161-1929063|CRISPRCasFinder
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	ACTTTCGGAGATTAGAAGGCAGGAATACTACAAGAT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AGATTTGATACTTAGTTCACTCTCAAGGAGC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GGTGAATTAGAATTGCGCCTTCGGATTTTTAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TGGAAGCTTGGGTTTGGTGGAAGCAGGGGGCAAAG
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TTTGAGCTTGAATTGGGGACTCCACACGCCGCGTACT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TAAAAATAAAAGCTAATGTTGGAGGAGCGATTAAAGAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	ACTGGCTGAAAAACTGGCCGCCAATTACCGCGAATTAC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GCAAAAAACACCGCAGCCGGGACGCTTGTAACAGGTGA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GATAGGGGGCCACCGAAGCATTGATAAACCTCCCT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CCAATTTCTTATGCTTACTTTAGCACCAGTTAAGA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	ACTAATAGTTACTGGCAAACATCAGATAACTGT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TTTTATGCTAGGAATTATATTTTGAGAAAAATTA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	ATGAACCTGTACTTAGAAGCATTGTGTCTCGC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TAATAGATTCTTGCAGTTGGCGTGATACTGTGCA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AATACCTGGTACCAACTTTAATAAACATGGTAACAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GGTAACAAGTTTATTAAAGGTATAATTTTTCTAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TTGTCTTTGGCGGGGTGCAATCTGCAATTATTGGG
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CTCTCCGACTATGCTAAAACCACTGGAATGCACGT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AGGATCTACATCCTCAGCAATCTTGTTTTCTAAT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AGTCAGCTATCAGACGAAATTGATTGCTTAAATGC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TTTTTCTGTGGGTTCCTTCAATACGCCTAAGAAT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GCTTACTAGAGGGGGCTTTTATTGTAGAAGATTTG
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GCGTAAGAATGCGGTTTTAGATTTGTCATACA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CCTTATGACTACTGCGATCGCTAAAAAAGTAAC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AGCTTATCAGTATAGGTTAATGGCTGACGGCGATTA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CCTTCAATACGCCTAAGAATGGAATGAAAGCCTCTAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC

>CP026692|10|4|1927161-1929063|CRT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	ACTTTCGGAGATTAGAAGGCAGGAATACTACAAGAT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AGATTTGATACTTAGTTCACTCTCAAGGAGC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GGTGAATTAGAATTGCGCCTTCGGATTTTTAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TGGAAGCTTGGGTTTGGTGGAAGCAGGGGGCAAAG
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TTTGAGCTTGAATTGGGGACTCCACACGCCGCGTACT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TAAAAATAAAAGCTAATGTTGGAGGAGCGATTAAAGAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	ACTGGCTGAAAAACTGGCCGCCAATTACCGCGAATTAC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GCAAAAAACACCGCAGCCGGGACGCTTGTAACAGGTGA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GATAGGGGGCCACCGAAGCATTGATAAACCTCCCT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CCAATTTCTTATGCTTACTTTAGCACCAGTTAAGA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	ACTAATAGTTACTGGCAAACATCAGATAACTGT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TTTTATGCTAGGAATTATATTTTGAGAAAAATTA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	ATGAACCTGTACTTAGAAGCATTGTGTCTCGC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TAATAGATTCTTGCAGTTGGCGTGATACTGTGCA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AATACCTGGTACCAACTTTAATAAACATGGTAACAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GGTAACAAGTTTATTAAAGGTATAATTTTTCTAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TTGTCTTTGGCGGGGTGCAATCTGCAATTATTGGG
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CTCTCCGACTATGCTAAAACCACTGGAATGCACGT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AGGATCTACATCCTCAGCAATCTTGTTTTCTAAT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AGTCAGCTATCAGACGAAATTGATTGCTTAAATGC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	TTTTTCTGTGGGTTCCTTCAATACGCCTAAGAAT
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GCTTACTAGAGGGGGCTTTTATTGTAGAAGATTTG
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	GCGTAAGAATGCGGTTTTAGATTTGTCATACA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CCTTATGACTACTGCGATCGCTAAAAAAGTAAC
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	AGCTTATCAGTATAGGTTAATGGCTGACGGCGATTA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC	CCTTCAATACGCCTAAGAATGGAATGAAAGCCTCTAA
ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH70398.1\|1934941_1935637_-\|dithiobiotin-synthetase	unknown	unknown	gnl\|CDD\|234625
CP026692.1\|AVH70391.1\|1926488_1926812_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH70385.1\|1918624_1919599_+\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|236011
CP026692.1\|AVH70392.1\|1929331_1929601_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
CP026692.1\|AVH70389.1\|1923887_1925621_+\|single-stranded-nucleic-acid-binding-R3H-domain-containing-protein	unknown	unknown	gnl\|CDD\|226372
CP026692.1\|AVH70399.1\|1935636_1937385_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
CP026692.1\|AVH70382.1\|1916051_1916909_-\|PfkB-like-carbohydrate-kinase	unknown	unknown	gnl\|CDD\|238920
CP026692.1\|AVH70396.1\|1932386_1933643_-\|trypsin-like-serine-protease-with-C-terminal-PDZ-domain	unknown	unknown	gnl\|CDD\|273938
CP026692.1\|AVH70388.1\|1922652_1923813_+\|4Fe-4S-ferredoxin	unknown	unknown	gnl\|CDD\|372225
CP026692.1\|AVH70395.1\|1931779_1932031_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH70387.1\|1921135_1921495_-\|glyoxalase/bleomycin-resistance-protein/dioxygenase	unknown	unknown	gnl\|CDD\|319909
CP026692.1\|AVH70400.1\|1938380_1939397_+\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|235072
CP026692.1\|AVH70386.1\|1919808_1921002_+\|coenzyme-F420-hydrogenase/dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|223966
CP026692.1\|AVH70394.1\|1930369_1931428_+\|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl\|CDD\|237376
CP026692.1\|AVH70397.1\|1933821_1934718_+\|ATP-adenylyltransferase	unknown	unknown	gnl\|CDD\|226803
CP026692.1\|AVH70393.1\|1929612_1930083_+\|protein-of-unknown-function-DUF3464	unknown	unknown	gnl\|CDD\|371813
CP026692.1\|AVH70383.1\|1916921_1917521_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
CP026692.1\|AVH70401.1\|1939624_1940320_+\|protein-of-unknown-function-DUF820	unknown	unknown	gnl\|CDD\|368559
CP026692.1\|AVH70390.1\|1926123_1926309_+\|high-light-inducible-protein	unknown	unknown	gnl\|CDD\|177653
CP026692.1\|AVH70384.1\|1917979_1918393_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH70398.1\|1934941_1935637_-\|dithiobiotin-synthetase	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	2.62893e-83
CP026692.1\|AVH70399.1\|1935636_1937385_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	7.34663e-62
CP026692.1\|AVH70385.1\|1918624_1919599_+\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|236011	PRK07399, PRK07399, DNA polymerase III subunit delta'; Validated.	6.17513e-173
CP026692.1\|AVH70392.1\|1929331_1929601_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	1.43986e-47
CP026692.1\|AVH70389.1\|1923887_1925621_+\|single-stranded-nucleic-acid-binding-R3H-domain-containing-protein	gnl\|CDD\|226372	COG3854, SpoIIIAA, ncharacterized protein conserved in bacteria [Function unknown].	3.50201e-132
CP026692.1\|AVH70382.1\|1916051_1916909_-\|PfkB-like-carbohydrate-kinase	gnl\|CDD\|238920	cd01945, ribokinase_group_B, Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .	4.69316e-100
CP026692.1\|AVH70396.1\|1932386_1933643_-\|trypsin-like-serine-protease-with-C-terminal-PDZ-domain	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.10277e-128
CP026692.1\|AVH70388.1\|1922652_1923813_+\|4Fe-4S-ferredoxin	gnl\|CDD\|372225	pfam12617, LdpA_C, Iron-Sulfur binding protein C terminal. This domain family is found in bacteria and eukaryotes, and is typically between 179 and 201 amino acids in length. The family is found in association with pfam00037. LdpA (light-dependent period) plays a role in controlling the redox state in cyanobacteria to modulate its. circadian clock. LdpA is a protein with Iron-Sulfur cluster-binding motifs.	1.39443e-117
CP026692.1\|AVH70397.1\|1933821_1934718_+\|ATP-adenylyltransferase	gnl\|CDD\|226803	COG4360, APA2, ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Nucleotide transport and metabolism].	2.03166e-124
CP026692.1\|AVH70393.1\|1929612_1930083_+\|protein-of-unknown-function-DUF3464	gnl\|CDD\|371813	pfam11947, DUF3464, Protein of unknown function (DUF3464). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.	3.20437e-79
CP026692.1\|AVH70400.1\|1938380_1939397_+\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|235072	PRK02812, PRK02812, ribose-phosphate pyrophosphokinase; Provisional.	0
CP026692.1\|AVH70386.1\|1919808_1921002_+\|coenzyme-F420-hydrogenase/dehydrogenase-subunit-beta	gnl\|CDD\|223966	COG1035, FrhB, Coenzyme F420-reducing hydrogenase, beta subunit [Energy production and conversion].	3.16589e-102
CP026692.1\|AVH70394.1\|1930369_1931428_+\|3-deoxy-7-phosphoheptulonate-synthase	gnl\|CDD\|237376	PRK13396, PRK13396, 3-deoxy-7-phosphoheptulonate synthase; Provisional.	0
CP026692.1\|AVH70387.1\|1921135_1921495_-\|glyoxalase/bleomycin-resistance-protein/dioxygenase	gnl\|CDD\|319909	cd07245, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	5.80867e-33
CP026692.1\|AVH70383.1\|1916921_1917521_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	3.81805e-19
CP026692.1\|AVH70401.1\|1939624_1940320_+\|protein-of-unknown-function-DUF820	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.55881e-33
CP026692.1\|AVH70390.1\|1926123_1926309_+\|high-light-inducible-protein	gnl\|CDD\|177653	PLN00014, PLN00014, light-harvesting-like protein 3; Provisional.	0.000108816

>CP026692.1|AVH70391.1|1926488_1926812_+|hypothetical-protein
MELPQRVSVRYKDASYNTNEIRLRTFRLGLQIWDEQTKPRKTELYQFILSCLKQVDRQDRFMFSLLFIELTDLIRNSSLERGTKEVLIKTAFREFACAITDFEDVAK
>CP026692.1|AVH70390.1|1926123_1926309_+|high-light-inducible-protein
MLMSDFKNTAPIVSEDPNAVRFGFTPQSENWNGRLAMIGFVSAILIEAFSGQGVLHFWGIL
>CP026692.1|AVH70389.1|1923887_1925621_+|single-stranded-nucleic-acid-binding-R3H-domain-containing-protein
MTITDDLQKLLDILPQDLQQVLESHPKRDSLVEVVLDLGRRPEARFPNQAEYLSEVPVTQEQIDDCIQRVGIFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVFGTIGMIRDLVETGKSILMLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAHPNEQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTLADLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWTVHESVADTVDNLLRGRQPTPQTRTVDDHGKIAVTRQLAVVNGRGGQLGTVEDSFPSARPSNGWRSSGQMVALPQLPVERVTGRSEFDRLLDESFNYSESIDFDAATRVPGPNGEDLPLHVYPYGVSRHQLEQVISVLTLPVVLTKDIDSADAILALRSHVKNHAKLRQMAKARHVPIHVIKSSTIPQITRGLRRLLNIDDPEMADDRELQLFLHNGSDDEMDALEEARLAVEQIVIPKGQPVELLPRSPQVRKMQHELVEHYRLKSHSFGEEPNRRLRIYPA
>CP026692.1|AVH70388.1|1922652_1923813_+|4Fe-4S-ferredoxin
MTDLFAPLQSLKQGDWFKLICGASFQHLPAVRSLTLAYTLAGADCIDVAADPAVIAAAQSGLQAAKSLAKDAQKRGFDYKGNLPFLMVSLNDGEDPHFRKAEFNPHECPTDCPRPCERICPAQAIVFDSIKEDFSGVVSEKCYGCGRCIPICPYSIIYTASYVTTPGAIAPLIMSTGVDAVEIHTRVGRLAEFERLWQAISPWADRLKLLAISCPDGEGMIDYLRALYDLIAPLKGALIWQTDGRPMSGDIGDGTTIAAVKLGQKVLAANLPGYVQLAGGTNSYTVAKLKAMGLLNDFRLPILDFRLEEANPQSKIQNPKSKISGVAYGSYARVLLSPILEQLENKEVSNTNVKATVRLEEDDILLWQAVKFAHSLVSQIKSQQER
>CP026692.1|AVH70387.1|1921135_1921495_-|glyoxalase/bleomycin-resistance-protein/dioxygenase
MQITQSLHTAILVTDLERSEHFYEKVLGLSKIDRSLNYPGAWYQVGDYQIHLIVATTVPTENPNEKWGRNPHVAFTVADLDAAKQEFLNHNYPIQASASGRAALFTQDPDGNIIELSQQ
>CP026692.1|AVH70386.1|1919808_1921002_+|coenzyme-F420-hydrogenase/dehydrogenase-subunit-beta
MTSVSPHKKARALKPASRRPAKELCSECGLCDTYYIHYVKEACAFINQQIGELEQETHTRSRHLENPDELYFGVHQDMIAARKQEPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQNTKEDRFQPMPVIARTPEEILAARVNKPTLSPNLSVLEQVEKSGMKRLLVIGVGCQIQALRAVEKQLGLEKLYVLGTPCVDNVNRAGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSSETVPFFGLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGWQWIVVRNDTGKEMLDLMKDQLDTQPVTSKGNRKEAVQQSIPAYDKGVTLPMWAAKLMGVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNHPEKLEAHVPEFAKRIVGQYKLPE
>CP026692.1|AVH70385.1|1918624_1919599_+|DNA-polymerase-III-subunit-delta'
MTNDPFAPVIGQQQAIELLTQAVRQNRVPPAYLFVGPDGVGRSLAARCFVELLFSGGMGVTASLQNRLRQGNHPALLWVQPTYQYQGQRLTATEAAEKGLKRKAPPVIRLEQIREITEFLSRPPLEAPRNVVVLEEAQTMAEAAANALLKTLEEPGQATLILIAPTPESILPTLVSRCQRIPFYRLDAQSLAVVLTQTGHQEILSNQAVLSIAAGSAGSAIASYEQLQAIADKLLEDLKKAPKSYRNALELAKTIDKDLDTEAQLWLVDYLQQFYWQQWHQPSIINQLEESRKHLLSYAQPRLVWECLLLSVYQKSNSISPTHR
>CP026692.1|AVH70384.1|1917979_1918393_+|hypothetical-protein
MTSNTLTQRIRQHQYLRDLRNKLLYLHKMLLETERIAYEQISGRVSSGELLQLVIAHEQFAWLHRISEMVVQVDEMLQADEPILLEDFQKLIADVRTLIVPLETGNTFERKYYNALQREPGAVLAHAEISRFLTSKV
>CP026692.1|AVH70383.1|1916921_1917521_-|PadR-family-transcriptional-regulator
MSLANVILGLLQQQEMTGYDLKTSCFDRCIAHLWPADQAQIYRTLDKLVEQGWITCNIEIQHDRPNRKVYSVTELGKAEFSQWLGIHQPLPTIREPLLVQLHFADQLSNETIIHLLEQQLAARSKKLTECETIDLPSLGDESANRKQVMQRLVLELVIRREETYIDWLKTAINVVSRQEPYPFTKKEFRSQEPEFRIEF
>CP026692.1|AVH70382.1|1916051_1916909_-|PfkB-like-carbohydrate-kinase
MNRGLFVGLVTLDLIYLANSAPKNNQKIVATDYTVAAGGPATNAAVTFNYLGNQATVLGVVGSHPMTQLIRGDLANYKVAIADLEPNTDLVPPVSSIVVTQATGERAVVSINAVKTQANSASIPPDILQKVNIVLIDGHQMGVSDSIVQMAKANNIPVAIDGGSWKPGFEQILPFVDYAICSANFYPPNCQTGEDVFSYLSGFDIPHIAITHGQEPIEYLSGTKTGIVDVPQIQAVDTLGAGDIFHGAFCHYILRESFTDAMSLAANIAADSCKFFGTRRWMDLR
>CP026692.1|AVH70392.1|1929331_1929601_+|30S-ribosomal-protein-S15
MALTQLRKQEIISNYQVHETDTGSADVQVAMLTERINRLSEHLQANKKDHSSRRGLLKLIGQRKRLLAYISQESREKYQALIARLGIRG
>CP026692.1|AVH70393.1|1929612_1930083_+|protein-of-unknown-function-DUF3464
MSAEESERSRLPFEPNKKRQKPAKTPSKPASQPQESVKQADKKVVYTKQEMAIPQVVSQRMIRRVAGFCGVPTVLGISALVVSYLLAIYSDIRLPPIAVLLVNMGLFGLGVLGITYGVLSASWDEEKVGSLLGLGEFNTNWGRMVAAWRETRQKNL
>CP026692.1|AVH70394.1|1930369_1931428_+|3-deoxy-7-phosphoheptulonate-synthase
MIIVMKSGSPEAEINRIDEELTSWGLTPEKIVGQHKVVIGLVGETASLDPLQIQELSPWIEQVLRVEQPYKRASRQYRHGEASEVVVNTPDGAVVFGEHQPLVVVAGPCSVENEEMIVETARRVKAAGATFLRGGAYKPRTSPYAFQGHGESALDLLARAREVSGLGIITEVMDAVDLDKIAEVADVIQVGARNMQNFSLLKKVGAQPKPVLLKRGMAATIEDWLMAAEYILASGNPNVILCERGIRTFDRQYTRNTLDLSVVPVLRKLTHLPIMIDPSHGVGWSEFVPSMAMAAIAAGTDSLMIEVHPNPAKALSDGPQSLTPDRFDNLMQELAVIGKAVGRWQQPAVALA
>CP026692.1|AVH70395.1|1931779_1932031_-|hypothetical-protein
MSIKRMLASAALILPIAVTFIPFQADAQIRRPVRRSVPARIIRRPVRFRVHTPVQARRRIFLPGRWVQTNRGRHWIPARYVYR
>CP026692.1|AVH70396.1|1932386_1933643_-|trypsin-like-serine-protease-with-C-terminal-PDZ-domain
MQNESRDREHPSNSIPHNTADAKYRKPWRKAAASLSLVLLGSGMTLAGGYMAGHSQQVSENASNLAVSRVNAAPPLPAGTDPNFVIQVVQKVGPAVVRIDSSRTVKTQIPDEFNDPLFQRFFGSQMPEQQDRVERGTGSGFIISADGRILTNAHVVDGADTVTVTLKDGRSFKGKVLGKDELTDVAVVKIQADNLPLVALGNSDKLQPGEWAIAIGNPLGLDNTVTTGIISATGRSSNLIGAPDKRVEYIQTDAAINPGNSGGPLLNSRGEVIAMNTAIIQGAQGLGFAIPINTAQHISSQLIATGKVEHPYLGIQMVGLTPQLKQNINSDPNSGLSVNEDKGVLVVKVIPNSPAAKAGIRAGDVIQKLGNQAVTDASSVQKAVENSQVGSDLRMELRRNGQNLNIAVQPGAFPTQVQ
>CP026692.1|AVH70397.1|1933821_1934718_+|ATP-adenylyltransferase
MAQGKILLKPGTLWTSVKERTEYALQCGALLSIPTEFEFVEQDGVRFLVRILSNLNRKKAAKKKQEKQSATSGEEFNPFLPYEEDLFVADISDTHVCILNKFNVVDYHLLIITRGFEEQESLLTLEDFTAMWACLADFDGLAFYNSSKTAGASQRHKHLQLVPLPLAPSGLQIPIEPLLTSAQFQNSNATLAKLPFVHAFASLNSNWVRSPFAGAQATLEIYHTLRHAVGLDAKQSGAYNLLATREWMLIVPRSHEHFQSISVNSLGFAGALLVRNAAEMEILKTQGPMTILKNVAVS
>CP026692.1|AVH70398.1|1934941_1935637_-|dithiobiotin-synthetase
MLNTLLITGTDTEAGKTVLTTALAAYWQKYYPQRRWGIMKPIQSGTGDREWYQKLFVLEQSAEEITPLYFQAPLAPPIAAARENRRVDLALVWQALSKLRSQRDFVLVEALGGLGSPITEELTVADLAGEWRLPTVLVVPVRLGAIAQAVANVALARQSRINLKGIVLNCVQPRTDAEIADWTPFQLIQSLTNTPVLGCLPYLDNLTDLDKLAQIASDLDWETLTLENDLN
>CP026692.1|AVH70399.1|1935636_1937385_-|serine/threonine-protein-kinase
MQPPITVGTVLQNRYRIIQILGQGGFGRTYLAEDQRRFNELCAIKELNSTARSALDWERAQELFHREAAILYQIEHPQVPKFRERFEQDQRLFLVEDYVAGQTYRTLLAERQAVGKTFTEAEVLQLIQMLLPVLEHIHSRGIIHRDISPENIILRDSDAKPVLIDFGVVKELATRLRSPDNPLPETTVGKLGYSPSEQMQTGGAYPSSDLYALAVSAIVLLTGKEPKDLFDQNQLTWNWQRWVKVNPRFAQVLNRMLNHIPSDRYQSAASVSQALQPLQEVSLPNVNVSNLQTMAVSRRPDLVAPAASPKKPAPVIPSSPSSSILDNPLAIAAIGIAVVIVAGFGSWALVSSIRSQSKTPDETLPQNFPSPVISGGTTFTPTPTPTFTPTPTPTPTPTNDRPVVSTKRLKLTASKPTTVEGTLKANQIIQYSFFGREGAKLNTFIDPGSSILLTVLSPNGQPIENTAQQVTFYQGTLLVTGRYTIELTLLSGVAESNYNLNVGLEKPVKPTSTEAPLPIPTETPLPIPTETPLPIPTETPLPIPTETPLPIPTETPLPIPTITEAPTLPPTDGTQPFSGQRN
>CP026692.1|AVH70400.1|1938380_1939397_+|ribose-phosphate-pyrophosphokinase
MNAHRGSAVLSSATFKVQPSATGLNDNHRLRLFSGSANLQLSQEVARYLGMDLGPMIRKRFADGELYVQIQESIRGCDVYLIQPCCQPVNDNLMELLIMVDACRRASARQVTAVIPYYGYARADRKTAGRESITAKLVANLITEAGANRVLAMDLHSAQIQGYFDIPFDHVYGSPVLLDYLASKQLPDVVVVSPDVGGVARARAFAKKLNDAPLAIIDKRRQAHNVAEVLNVIGDVKGKTAVLVDDMIDTGGTIAEGARLLREEGARQVYACATHAVFSPPAMERLSSGLFEEVIVTNTIPIPENNRFSQLVVLSVANLLGETIWRIHEDTSVSSMFR
>CP026692.1|AVH70401.1|1939624_1940320_+|protein-of-unknown-function-DUF820
MVATPKKVISVLPLENGDRLSRCEFERRYQAMPHLRKAELVEGVVYIMASPLRIKSHGEPHGDLIGWLWNYKTATPGVVLGIEPTVRLDPDNEPQPDAVLFIPGRQALINEDDYIQGAPELVIEVAASSAAIDLHDKKRTYRRNGVQEYIVWRTLDNQLDWFRLQADEYVSLPIDDQGIIRSQVFPGLWLVVPALLSGEMATVLSVLQAGLAATEHQEFMQKLNETIENGE

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Crispr_ID: CP026692_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_11

2382335-2382455

Orphan

Consensus_repeat	Method
CTGCGATCGCTGACAACGATACTCATGTCTAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026692_11

>merge|CP026692|11|2382335-2382455|CRISPRCasFinder
CTGCGATCGCTGACAACGATACTCATGTCTATGACAATATGATTTAAGGCATAGGGTATGTTACCGTGTTAGCGTAACGCACCGAAAACCTGCGATCGCTGACAACGATACTCATGTCTAT

>CP026692|11|10|2382335-2382455|CRISPRCasFinder
CTGCGATCGCTGACAACGATACTCATGTCTAT	GACAATATGATTTAAGGCATAGGGTATGTTACCGTGTTAGCGTAACGCACCGAAAAC
CTGCGATCGCTGACAACGATACTCATGTCTAT

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH70745.1\|2390056_2390824_+\|KaiB-domain-containing-protein	unknown	unknown	gnl\|CDD\|239276
CP026692.1\|AVH70730.1\|2369662_2371585_+\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
CP026692.1\|AVH70737.1\|2380746_2381784_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381320
CP026692.1\|AVH70747.1\|2394809_2395742_+\|glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|237771
CP026692.1\|AVH70746.1\|2393906_2394785_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
CP026692.1\|AVH70733.1\|2376292_2377315_+\|TPR-repeat-containing-protein	unknown	unknown	gnl\|CDD\|276809
CP026692.1\|AVH70728.1\|2365310_2366837_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP026692.1\|AVH70734.1\|2377492_2378506_+\|NADPH:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|176237
CP026692.1\|AVH70740.1\|2384612_2385023_+\|response-regulator-receiver-protein	unknown	unknown	gnl\|CDD\|381118
CP026692.1\|AVH70735.1\|2378583_2379255_-\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|223698
CP026692.1\|AVH70729.1\|2368410_2369229_+\|NAD-dependent-epimerase/dehydratase	unknown	unknown	gnl\|CDD\|187554
CP026692.1\|AVH70732.1\|2373747_2375628_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
CP026692.1\|AVH70741.1\|2385293_2385884_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
CP026692.1\|AVH70744.1\|2388603_2389887_+\|twitching-motility-protein-PilT	unknown	unknown	gnl\|CDD\|225364
CP026692.1\|AVH70739.1\|2383706_2384417_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
CP026692.1\|AVH70731.1\|2371720_2372359_+\|acetoacetate-decarboxylase	unknown	unknown	gnl\|CDD\|377649
CP026692.1\|AVH70742.1\|2386109_2387240_-\|UDP-N-acetylglucosamine-2-epimerase	unknown	unknown	gnl\|CDD\|272978
CP026692.1\|AVH70743.1\|2387501_2387873_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH70736.1\|2379494_2380622_-\|arylsulfotransferase	unknown	unknown	gnl\|CDD\|368677
CP026692.1\|AVH70738.1\|2382879_2383626_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH70745.1\|2390056_2390824_+\|KaiB-domain-containing-protein	gnl\|CDD\|239276	cd02978, KaiB_like, KaiB-like family; composed of the circadian clock proteins, KaiB and the N-terminal KaiB-like sensory domain of SasA. KaiB is an essential protein in maintaining circadian rhythm. It was originally discovered from the cyanobacterium Synechococcus as part of the circadian clock gene cluster, kaiABC. KaiB attenuates KaiA-enhanced KaiC autokinase activity by interacting with KaiA-KaiC complexes in a circadian fashion. KaiB is membrane-associated as well as cytosolic. The amount of membrane-associated protein peaks in the evening (at circadian time (CT) 12-16) while the cytosolic form peaks later (at CT 20). The rhythmic localization of KaiB may function in regulating the formation of Kai complexes. SasA is a sensory histidine kinase which associates with KaiC. Although it is not an essential oscillator component, it is important in enhancing kaiABC expression and is important in metabolic growth control under day/night cycle conditions. SasA contains an N-terminal sensory domain with a TRX fold which is involved in the SasA-KaiC interaction. This domain shows high sequence similarity with KaiB. However, the KaiB structure does not show a classical TRX fold. The N-terminal half of KaiB shares the same beta-alpha-beta topology as TRX, but the topology of its C-terminal half diverges.	6.80487e-31
CP026692.1\|AVH70730.1\|2369662_2371585_+\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
CP026692.1\|AVH70737.1\|2380746_2381784_-\|aldo/keto-reductase	gnl\|CDD\|381320	cd19094, AKR_Tas-like, Escherichia coli Tas protein and similar proteins. Escherichia coli Tas protein is the prototype of this family. It is an NADP(H)-dependent aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NADP(H) as a hydride donor.	0
CP026692.1\|AVH70747.1\|2394809_2395742_+\|glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|237771	PRK14619, PRK14619, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional.	0
CP026692.1\|AVH70746.1\|2393906_2394785_+\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
CP026692.1\|AVH70733.1\|2376292_2377315_+\|TPR-repeat-containing-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	8.12044e-09
CP026692.1\|AVH70728.1\|2365310_2366837_-\|histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.57455e-16
CP026692.1\|AVH70734.1\|2377492_2378506_+\|NADPH:quinone-oxidoreductase	gnl\|CDD\|176237	cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
CP026692.1\|AVH70740.1\|2384612_2385023_+\|response-regulator-receiver-protein	gnl\|CDD\|381118	cd17580, REC_2_DhkD-like, second phosphoacceptor receiver (REC) domain of Dictyostelium discoideum hybrid signal transduction histidine kinase D and similar domains. Dictyostelium discoideum hybrid signal transduction histidine kinase D (DhkD) is a large protein that contains two histidine kinase (HK) and two REC domains on the intracellular side of a single pass transmembrane domain, and extracellular PAS and PAC domains that likely are involved in ligand binding. This model represents the second REC domain and similar domains. DhkD activates the cAMP phosphodiesterase RegA to ensure proper prestalk and prespore patterning, tip formation, and the vertical elongation of the mound into a finger, in Dictyostelium discoideum. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.04856e-36
CP026692.1\|AVH70735.1\|2378583_2379255_-\|glutathione-S-transferase	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	1.83607e-32
CP026692.1\|AVH70729.1\|2368410_2369229_+\|NAD-dependent-epimerase/dehydratase	gnl\|CDD\|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	9.62302e-49
CP026692.1\|AVH70732.1\|2373747_2375628_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	7.30452e-167
CP026692.1\|AVH70741.1\|2385293_2385884_+\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	6.01589e-12
CP026692.1\|AVH70744.1\|2388603_2389887_+\|twitching-motility-protein-PilT	gnl\|CDD\|225364	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].	0
CP026692.1\|AVH70739.1\|2383706_2384417_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	7.04259e-27
CP026692.1\|AVH70731.1\|2371720_2372359_+\|acetoacetate-decarboxylase	gnl\|CDD\|377649	pfam06314, ADC, Acetoacetate decarboxylase (ADC). This family consists of several acetoacetate decarboxylase (ADC) proteins (EC:4.1.1.4).	2.33625e-24
CP026692.1\|AVH70742.1\|2386109_2387240_-\|UDP-N-acetylglucosamine-2-epimerase	gnl\|CDD\|272978	TIGR00236, UDP-N-acetylglucosamine_2-epimerase, UDP-N-acetylglucosamine 2-epimerase. This cytosolic enzyme converts UDP-N-acetyl-D-glucosamine to UDP-N-acetyl-D-mannosamine. In E. coli, this is the first step in the pathway of enterobacterial common antigen biosynthesis.Members of this orthology group have many gene symbols, often reflecting the overall activity of the pathway and/or operon that includes it. Symbols include epsC (exopolysaccharide C) in Burkholderia solanacerum, cap8P (type 8 capsule P) in Staphylococcus aureus, and nfrC in an older designation based on the effects of deletion on phage N4 adsorption. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
CP026692.1\|AVH70736.1\|2379494_2380622_-\|arylsulfotransferase	gnl\|CDD\|368677	pfam05935, Arylsulfotrans, Arylsulfotransferase (ASST). This family consists of several bacterial Arylsulfotransferase proteins. Arylsulfotransferase (ASST) transfers a sulfate group from phenolic sulfate esters to a phenolic acceptor substrate.	3.58706e-29
CP026692.1\|AVH70738.1\|2382879_2383626_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	4.37516e-23

>CP026692.1|AVH70737.1|2380746_2381784_-|aldo/keto-reductase
MKYNQLGKSDLKVSETCLGTMTYGQQNTIEEAHEQLDYSIAQGVNFIDAAEMYPVPTSGETYGLTETYIGKWLKRQQRDQLIIATKIAGPGRGFKWVRGGAKAIDRDNIKQAVDDSLKRLQTDYIDLYQIHWPDRYVPRFGQTVFDPTQVEKTIPIPEQLAVFADVIKAGKIRYIGLSNETPWGVAQFSNAAKQLGLPKVVSIQNAYNLLNRVFDGALAEAVYQEEIGLLAYSPLAFGFLTGKYLNGKPEKARVTLFENFGQRYLKPKVGQAVAAYVEIAKRHQLSPAHLALAFVRSRWFVPSTIIGATTLEQLKENLESVNVVLNKDILEELDIVHAQSPNPAP
>CP026692.1|AVH70736.1|2379494_2380622_-|arylsulfotransferase
MTFTVTSVDQNTIRRRGTGLKAYNPEKVFKGYTLFTPLTGQGEVYLLNLEGEVVHQWNLPYPPGLYGYLLPNGNLFYNGKTPPEEPLRFALWAAFKSGVVLEADPKGNIIWEYKHPDHHHDGRRLANGNTIILAIEKIPQSLVPRIKGGVPGTEPDGDIYADVLYEVTPAGEIVWTWHAHEHLDPDIFTITPQDHRHEWTHGNTVDELADGNIIVSFRNISTVAIIDRKTGEIIWTLGDDVLAQQHFPNELANGNILIFDNGAHRRNIALNFSRVIEVNRQTKEIVWEYTDNPPQNFFSAYISGAQRLANGNTLITEGAYGRIFEVTVTGEIVWEYINPHFASRNIPGEKSPVTRGEQNTVFRAFRYAPEEVPWL
>CP026692.1|AVH70735.1|2378583_2379255_-|glutathione-S-transferase
MAEIKVYSAVVCPYAHRTRLVLQEKGINFDLIEIDLQNKPEGFTKVSPYGKVPAITHGDNRVWESAVINEYLDEVFPNPPLLPSSHIDRAQARIWIDFANTRFVPAFSTLLRSSDPEKQEEAKQELYKHLEFIENEGLAKLSGEGPYWFGESISLVDFTYFPWFERWTALKQYRGFGIPEQFTRLRQWKHALKERESVKAIAHSKEFYIERYAKFAAPTLAAV
>CP026692.1|AVH70734.1|2377492_2378506_+|NADPH:quinone-oxidoreductase
MKAYEIQSNAGIDALALVDRPEPKPTDGQVLIQVKATSLNYRDLLVAQGAYGAGQKYPLIPMSDGAGEVVAVGEGVTRVKIGDRVAGTFFQDWIYGSLTKEKMKSDLGGGIDGMLAEYVLLHQEGLVILPDYLSYLEGATLPCAAVTAWHGLVTKGNIGAGDSILLLGTGGVSIFALQFAKLHGARAIITSSSDEKLARAKQLGADETINYKTTPDWEKQVYQLTNRTGVDHVVEVGGAGTLPKSLQAVRIGGRISLIGVLSGTGNEIDPMPILFKSLTVQGIYVGSREMFEAMNQAMQQHQIKPIIDRVFPFTEAREAYHYLKSAAHFGKVVICNS
>CP026692.1|AVH70733.1|2376292_2377315_+|TPR-repeat-containing-protein
MRQPLNRVKEWEQRRDEANRYYQRGKFQESLDLATKNLHLARAIPDRAREGYTLNDLGLAHLSCRQPQKALERFYQALSVAIEIGNTPAEATALSNLGSTYSHLGRFSQALEYFDKALPIFRRSQDTQNEVSTLNDIALIYTRLGEPKRSLLLQHQILRMRRLLGDFSGEATTLNGIGFAYNVLGKFEQALEFFQAALPIQRAVKNLLAEATTLNNIASVYHDLGKPKEALLLYNQVLLTRRAISDRSGEATTLHNIGFTYSTLAEHRQAMKFYKQAIVIYQELGDNLGEISTLLNMGSLYATTKRKKMARSCYQNAQELAEQIEYQPLLEKVQQFIDSL
>CP026692.1|AVH70732.1|2373747_2375628_-|ABC-transporter-ATP-binding-protein
MSIYQSLKKSYTPARRRENDWRLFLRLVPYARRNGRLLALSMCLLVPIALANALQPFLIGQVISLIRHEPSTYEFFRNRPFSQGLNILEGLLVIAIAIQLILTGLQGYIVQKLGQQITAAIRQDLFQHVTSLAVRFFDRTPVGKLITRITSDVEVLGDVFSTGAVGIISDLFLMLVTLGLMFSIQWQLSCLLLLMLLPTSWVIVYIQKQYRKANYKGREELSILNSQLQENVLGINVVQLFRREKFNAELFRATNSNYTQQMDKTIFYDSFVSATLEWIGLIAIAGVLCMGGWLLLEKNLTFGTLSTFVLYAQRLFDPLRAFAEKFTVIQAGFTAIERVGDILDEPIEIRDRANVRFSIFDAKFGYIDEILANLESPNLTSPPELGEIRFDHVWFAYKNDDYVIKDLDFTIHPGEKIALVGPTGAGKTSIIRLLCRLYEPTQGRILIDGVDIREVPQAELRRYMAVILQEGFLFAGDVKSNISLGDGYTIEQIQQAAEETNIAQFIEELPQGYDTQLRERGTNISSGQKQLLAFARAAIRNPQILVLDEATASLDVGTEASVQEALNQLLLRRTAIIIAHRLSTIRNVDRIFVLKRGELIEQGSHEQLLQQGGLYATLHNLQMLGA
>CP026692.1|AVH70731.1|2371720_2372359_+|acetoacetate-decarboxylase
MPYPQAPWTLQGHAIQTLHLLNIDQVRPLIPLELEIVSVWPGKTLGSVYFSNYGSGSVLEYSELIVVPALINYQRKIGAWISHIYVDNADSVAGGREIWGLPKELAKFTWEQGKYVTVHQENRKLCSLKYNQQSLAWRQRLSASSFSAKGADLLIFPAEFESMLGLIGSKLEIPVESPFSGIGLGQPWLTVRCEQLSLRVDAPKVVGQSILD
>CP026692.1|AVH70730.1|2369662_2371585_+|molecular-chaperone-DnaK
MAKVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAFAKNGDNLVGQIAKRQAVMNPENTFYSVKRFIGRRYDEVSNEATEVSYKVLSSNGNVKLDCPIAGKPFAPEEISAKVLRKLVEDASKYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGIEVLRIINEPTAASLAYGFDKKSNETILVFDLGGGTFDVSVLEVGDGVFEVLATSGDTHLGGDDFDKKIVDFLAEKFKKAEGIDLRKDKQALQRLTEAAEKAKIELSSVTQAEINLPFITATQDGPKHLDTTLTRAQFEELCSDLIDRCRIPVENALRDAKLNKGDIDEVVLVGGSTRIPAVHQIVKQVLGKDPNQSVNPDEVVAVGAAIQAGVLAGDVTGILLLDVTPLSLGVETLGGVMTKIIPRNTTIPTKKSEVFSTAVDGQTNVEIHVLQGEREFSNDNKSLGTFRLDGIPPAPRGVPQIEVVFDIDANGILNVTAKDKGTGKEQSISITGASTLDKNDVDRMVREAEQNASSDKERREKIERKNQADSLAYQAEKQLQELGDKVPDADKTKVEGLVKELREAVAKEDDEQIKKLTPELQQALFAVGSNIYQQAGASAGAGAGATSGGEPQDSSSSSSSGNGDDVIDADFTESK
>CP026692.1|AVH70729.1|2368410_2369229_+|NAD-dependent-epimerase/dehydratase
MTSFDSAKDLVLVVGATGGVGQLVVGKLLEKGLKVRVLTRNAAKAEEMFNQKVEIAVGDIRQPATLPAAMPGVTYIINCTGTTAFPSARWEFDQPPNLIEWGIIFLNPKSSEAKAKNSPAKIDAQGVSNLVAAAPQNLKRFVFISSCGILRKNQFPFSILNGFGVLDAKQKGEESIINSGLPYTIIRPGRLIDGPYTSYDLNTLLKAKTGGKYGVVIGTGDTLSGDASRIDVANACVECLFQPSNSRKIFEIVNQGQRPPVIDWETLFSGIE
>CP026692.1|AVH70728.1|2365310_2366837_-|histidine-kinase
MYQCILPSLSEILAENQSSVAECSPAKAEQQWRISLAATEHLLLNTLADPSVDTTQGLVLAAPAPLFSQPKLTQSLQTVTFTAKPFNPLALMPFQMPGAIASVNEDIAPHESVLPLLPGDPLGAEQFCLVFTDKFRLVLVLATQKNGKKTFSFSFEPEIVQQAWRSLGARVMLANPEFFARLDALVEQYSPVAPDYRMMIHFSQLLLQELTEPEETNDSLLGTEEEAREQGSRGVGEQGRRVIPQCPMPNTHYLLSTEGAPPSPNPDVELLQAFAHEVRTPLTTIRTMTRLLLKRRDLDASVLNRLKIIDHECTEQIDRMELLFKAAELETTASAKSSKTQLTPMSLDQVLQQSIPRWEQAAHRRNLTLNVVLPQQLPTVVSNPTMLDQVLTGLIENFTRSLPAGSHIQVQVIPAGDQLKLQLSPQFRCKDSNKAATPATPPIRKALGQLLMFQPETGTISLNIAATKHLFQAIGGKLIVRQRPHYGEVLTIFLPLEVSNKHKPAVIN
>CP026692.1|AVH70738.1|2382879_2383626_+|Crp/Fnr-family-transcriptional-regulator
MSLDKNALEQPANKLLAALPASEYQRLVPHLKLVSLEVQQILYEAGEPITQVYFPDKSMISIVTTMEDGSTAEVGIVSSEGMVGIPVILGSRITTTTSFMQISGAAMQMNADVLRAEFNRGGALQNLLLCYVQAIYSELAQAAACNRLHTLDERLARWLLTVSDRVESEDFALTQEFIAQMLGVRRSGVTVAASTLSQAGMISYKRGHISILNREDLEATSCECYRVIQNEFARLLGMKPNNRAKKIF
>CP026692.1|AVH70739.1|2383706_2384417_+|Crp/Fnr-family-transcriptional-regulator
MNEKTFKPQVNRLLAALPTSDYQRLVPHLKLVSLSTRQVIYESGEPIAHVYFPQHGVVSLVANMKNGSMMEVGIVSSEGMVGIPIILGGNTTTTKAFVQVSGAAMRMDTDVLKTELNQGGAIQNLLLRYVQAVYTELAQGCACNRFHTIEERLARWLLTVSDRLQSEDFPLTQEFIAQMLGVRRSGVTVAANTLSQTRMIRYQRGHISILKREDLSATSCECYRVIQNEFTRLLGN
>CP026692.1|AVH70740.1|2384612_2385023_+|response-regulator-receiver-protein
MSNQSMSFQGLRLLVVDDDTDTRILLTFLFELEGAEVIAAASADKALKIMSSFKPDILISDICLPDEDGCSLLLKVKNLEAKRGRKIPAIALTASTFEGDRERALLAGYDIYQCKPIDLDELTSIVATLTRTEQYV
>CP026692.1|AVH70741.1|2385293_2385884_+|peptidoglycan-binding-protein
MEYLAYSHMFIAQEEASGNTKYHLPQPQFNWKKLLKSSAWLALAGVGVLFAAVTQIQMSSAAYVKTNGSCLRVRSGPSTNYSYVDCVPNGATLPTIERYENGFARLSTGRYIFARWIGDRPNNRPVTRPGGVGGSVILTPGSKGLLVRDVQTALGNLRVDGIYGQETVSRVRSFQQSKGLLVDGVVGPETRSALGI
>CP026692.1|AVH70742.1|2386109_2387240_-|UDP-N-acetylglucosamine-2-epimerase
MTNQKRVCIILGTRPEAIKLAPVIQVFQKSSELQLQVILTGQHREMVEQVMQLFNIKSDYNLEIMQVQQSLNDITCRSLQGLEALFKVKKPDLVIVQGDTTTAFAAALAAFYQKIPIGHVEAGLRTDDIFNPYPEEANRRLISQITQLHFAPTPWAVENLHRSGVLGEIHMTGNTVIDALLNVAATQVVCNVPGLDWESYRVLLATVHRRENWGEPLLAIAQSFLQILDKFPDTALLLPLHRNPTVRVPLQELLGNHPRIFLTDPLDYGELVGAIGRSHLLLTDSGGLQEEAPSLGKPVLVLRDTTERPEAVVAGTAKLVGTTTENIFAAAAELLSYSDAYEAMANAINPFGDGHAAERILQIVENYLGISSETST
>CP026692.1|AVH70743.1|2387501_2387873_-|hypothetical-protein
MVSAQSSNQGKTYSLLMIKSFLIWTFTLAVCLLVVGFPLVVLMATVGCLLSIILQSVMPVSAVLLVAGALIMFNVMAVVLAAGVLTLKGVHPSEVKWLSWLHGEADQMQVTVYAACPLTCEIK
>CP026692.1|AVH70744.1|2388603_2389887_+|twitching-motility-protein-PilT
MTESQSPLNSNSAAGRNLPPMPPPPPPIPTFITQRQMTQTLDMSIDRGTNLPVAGHRPGSPPPIPNSVRPQNSSPEITLEKLIREAYDQGYSDLHLGVGEPPRFRSRGEIQSGDYPETDKETFMNWLREVMSEGEIQRFEESLEFDGATQYEFARVRINVFGSLKGPAMVLRLIPLKILTMEQLRLPPIFRDICHHHKGLILVTGPTGSGKSTTMAAMIDYINKEMAKHIITIEDPIEFVHQSRKSLVKQREVGMHTRKFDNALKAALREDPDLILVGEMRDKETVNTALKAAQTGHLVMGTLHTNSAVKTIERILNLYSGDEQDAMRVAISESLVAVIAQGLCRTTDGKRAAFHDVLINTEAIKEWIKDGKYDEIGELMKQAGFDGMITMNQSLLNLYQDGRITEETALEMSPTPNEMAQFLRGRV
>CP026692.1|AVH70745.1|2390056_2390824_+|KaiB-domain-containing-protein
MNNLTTNKLSTPQLFKGIALFTPGGDLIYCIDPSKQGRWHLHLCSALQEILDLPEPPHFLVPCYTATIDNWLDPRTQQVRTFAEAYPAVIRHQALLNAIFGTEELVWQAAPWQEGLCDRMVLTTYHSSFGQLWEDHDLIVRLDLSEPVPKYHQPVIVQKKEAITQGYVLRLFVAGHSSSTERILQNLHELLERSLGHPYTLKVIDVLSHPEQAELNQVSATPTLVKVWPHPIRRIVGELDHVEKILQMLAAKEKF
>CP026692.1|AVH70746.1|2393906_2394785_+|lipoyl-synthase
MTVKPDWLRVKAPGRERIGNVKEILRDLALNTVCEEASCPNIGECFNAGTATFLIMGPACTRACPYCDIDFEKKPKPLDPTEPTRLAQAVRRMNLNHVVITSVNRDDLLDGGASQFMACIDAVNSVSPNTTIEVLIPDLCGNWNALESILQAAPEVLNHNTETVPRLYRRVRPQGNYDRTLELLQRTRKLSPSTYTKSGIMVGLGETDAEIRQVMQDLRTVDCDILTIGQYLQPSQKHLQVNEFVNPEQFANWKAFGEEIGFLQVVSSPLTRSSYHAEQVRELMERYPRFKS
>CP026692.1|AVH70747.1|2394809_2395742_+|glycerol-3-phosphate-dehydrogenase
MYSNSKLSVAILGAGAWGASLANLAIANGHLVRVWSRQGSQIQTVLKDVQIVLSAISMIGVRDVASQVESFPLSPETIFVTATKGLDPQTTCTPSQIWQTIFPNHAVVVLSGPNLSKEIQMELPAATVVASNIPTAAEVVQLVFSSQRFRVYTNPDPLGVELGGTLKNVIAIAAGVCDGLQLGTNAKAALVTRGLTEMVRIGNNWGAKTETFYGLSGLGDLLATCNSPLSRNYQVGYQLAGGKSLTETLANLQGTAEGVNTCRVLMQRAKQQNIAVPITEQVYRLLQGEITPGQALDELMLRDIKPEYNY

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Crispr_ID: CP026692_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_12

2387391-2387509

Orphan

Consensus_repeat	Method
TGTTTGTCTAATTAACCTGTAATGACTATTTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026692_12

>merge|CP026692|12|2387391-2387509|CRISPRCasFinder
TGTTTGTCTAATTAACCTGTAATGACTATTTAAAAGTTCAAATTATAAAAACCATGAAAAAACCCGGCTTAACCGGGCAGACGCACTGTTTGTCTAATTAACCTGTAATAACTATTTAA

>CP026692|12|11|2387391-2387509|CRISPRCasFinder
TGTTTGTCTAATTAACCTGTAATGACTATTTAA	AAGTTCAAATTATAAAAACCATGAAAAAACCCGGCTTAACCGGGCAGACGCAC
TGTTTGTCTAATTAACCTGTAATAACTATTTAA

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH70745.1\|2390056_2390824_+\|KaiB-domain-containing-protein	unknown	unknown	gnl\|CDD\|239276
CP026692.1\|AVH70751.1\|2399959_2404138_-\|cobaltochelatase-CobN-subunit	unknown	unknown	gnl\|CDD\|235663
CP026692.1\|AVH70739.1\|2383706_2384417_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
CP026692.1\|AVH70738.1\|2382879_2383626_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
CP026692.1\|AVH70747.1\|2394809_2395742_+\|glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|237771
CP026692.1\|AVH70734.1\|2377492_2378506_+\|NADPH:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|176237
CP026692.1\|AVH70733.1\|2376292_2377315_+\|TPR-repeat-containing-protein	unknown	unknown	gnl\|CDD\|276809
CP026692.1\|AVH70740.1\|2384612_2385023_+\|response-regulator-receiver-protein	unknown	unknown	gnl\|CDD\|381118
CP026692.1\|AVH70752.1\|2406367_2407198_-\|alpha-L-glutamate-ligase	unknown	unknown	gnl\|CDD\|223267
CP026692.1\|AVH70748.1\|2396551_2397802_+\|RNA-polymerase-sigma-factor-SigC	unknown	unknown	gnl\|CDD\|236067
CP026692.1\|AVH70735.1\|2378583_2379255_-\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|223698
CP026692.1\|AVH70749.1\|2398222_2398678_+\|Fur-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366663
CP026692.1\|AVH70753.1\|2407281_2408157_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
CP026692.1\|AVH70750.1\|2398810_2399950_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|225943
CP026692.1\|AVH70741.1\|2385293_2385884_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
CP026692.1\|AVH70744.1\|2388603_2389887_+\|twitching-motility-protein-PilT	unknown	unknown	gnl\|CDD\|225364
CP026692.1\|AVH70746.1\|2393906_2394785_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
CP026692.1\|AVH70742.1\|2386109_2387240_-\|UDP-N-acetylglucosamine-2-epimerase	unknown	unknown	gnl\|CDD\|272978
CP026692.1\|AVH70736.1\|2379494_2380622_-\|arylsulfotransferase	unknown	unknown	gnl\|CDD\|368677
CP026692.1\|AVH70737.1\|2380746_2381784_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381320

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH70745.1\|2390056_2390824_+\|KaiB-domain-containing-protein	gnl\|CDD\|239276	cd02978, KaiB_like, KaiB-like family; composed of the circadian clock proteins, KaiB and the N-terminal KaiB-like sensory domain of SasA. KaiB is an essential protein in maintaining circadian rhythm. It was originally discovered from the cyanobacterium Synechococcus as part of the circadian clock gene cluster, kaiABC. KaiB attenuates KaiA-enhanced KaiC autokinase activity by interacting with KaiA-KaiC complexes in a circadian fashion. KaiB is membrane-associated as well as cytosolic. The amount of membrane-associated protein peaks in the evening (at circadian time (CT) 12-16) while the cytosolic form peaks later (at CT 20). The rhythmic localization of KaiB may function in regulating the formation of Kai complexes. SasA is a sensory histidine kinase which associates with KaiC. Although it is not an essential oscillator component, it is important in enhancing kaiABC expression and is important in metabolic growth control under day/night cycle conditions. SasA contains an N-terminal sensory domain with a TRX fold which is involved in the SasA-KaiC interaction. This domain shows high sequence similarity with KaiB. However, the KaiB structure does not show a classical TRX fold. The N-terminal half of KaiB shares the same beta-alpha-beta topology as TRX, but the topology of its C-terminal half diverges.	6.80487e-31
CP026692.1\|AVH70751.1\|2399959_2404138_-\|cobaltochelatase-CobN-subunit	gnl\|CDD\|235663	PRK05989, cobN, cobaltochelatase subunit CobN; Reviewed.	0
CP026692.1\|AVH70739.1\|2383706_2384417_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	7.04259e-27
CP026692.1\|AVH70738.1\|2382879_2383626_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	4.37516e-23
CP026692.1\|AVH70747.1\|2394809_2395742_+\|glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|237771	PRK14619, PRK14619, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional.	0
CP026692.1\|AVH70734.1\|2377492_2378506_+\|NADPH:quinone-oxidoreductase	gnl\|CDD\|176237	cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
CP026692.1\|AVH70733.1\|2376292_2377315_+\|TPR-repeat-containing-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	8.12044e-09
CP026692.1\|AVH70740.1\|2384612_2385023_+\|response-regulator-receiver-protein	gnl\|CDD\|381118	cd17580, REC_2_DhkD-like, second phosphoacceptor receiver (REC) domain of Dictyostelium discoideum hybrid signal transduction histidine kinase D and similar domains. Dictyostelium discoideum hybrid signal transduction histidine kinase D (DhkD) is a large protein that contains two histidine kinase (HK) and two REC domains on the intracellular side of a single pass transmembrane domain, and extracellular PAS and PAC domains that likely are involved in ligand binding. This model represents the second REC domain and similar domains. DhkD activates the cAMP phosphodiesterase RegA to ensure proper prestalk and prespore patterning, tip formation, and the vertical elongation of the mound into a finger, in Dictyostelium discoideum. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.04856e-36
CP026692.1\|AVH70752.1\|2406367_2407198_-\|alpha-L-glutamate-ligase	gnl\|CDD\|223267	COG0189, RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis].	6.0265e-15
CP026692.1\|AVH70748.1\|2396551_2397802_+\|RNA-polymerase-sigma-factor-SigC	gnl\|CDD\|236067	PRK07598, PRK07598, RNA polymerase sigma factor SigC; Validated.	0
CP026692.1\|AVH70735.1\|2378583_2379255_-\|glutathione-S-transferase	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	1.83607e-32
CP026692.1\|AVH70749.1\|2398222_2398678_+\|Fur-family-transcriptional-regulator	gnl\|CDD\|366663	pfam01475, FUR, Ferric uptake regulator family. This family includes metal ion uptake regulator proteins, that bind to the operator DNA and controls transcription of metal ion-responsive genes. This family is also known as the FUR family.	3.20289e-48
CP026692.1\|AVH70753.1\|2407281_2408157_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	3.4055e-06
CP026692.1\|AVH70750.1\|2398810_2399950_-\|peptidoglycan-binding-protein	gnl\|CDD\|225943	COG3409, COG3409, Putative peptidoglycan-binding domain-containing protein [Cell envelope biogenesis, outer membrane].	7.34976e-24
CP026692.1\|AVH70741.1\|2385293_2385884_+\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	6.01589e-12
CP026692.1\|AVH70744.1\|2388603_2389887_+\|twitching-motility-protein-PilT	gnl\|CDD\|225364	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].	0
CP026692.1\|AVH70746.1\|2393906_2394785_+\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
CP026692.1\|AVH70742.1\|2386109_2387240_-\|UDP-N-acetylglucosamine-2-epimerase	gnl\|CDD\|272978	TIGR00236, UDP-N-acetylglucosamine_2-epimerase, UDP-N-acetylglucosamine 2-epimerase. This cytosolic enzyme converts UDP-N-acetyl-D-glucosamine to UDP-N-acetyl-D-mannosamine. In E. coli, this is the first step in the pathway of enterobacterial common antigen biosynthesis.Members of this orthology group have many gene symbols, often reflecting the overall activity of the pathway and/or operon that includes it. Symbols include epsC (exopolysaccharide C) in Burkholderia solanacerum, cap8P (type 8 capsule P) in Staphylococcus aureus, and nfrC in an older designation based on the effects of deletion on phage N4 adsorption. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
CP026692.1\|AVH70736.1\|2379494_2380622_-\|arylsulfotransferase	gnl\|CDD\|368677	pfam05935, Arylsulfotrans, Arylsulfotransferase (ASST). This family consists of several bacterial Arylsulfotransferase proteins. Arylsulfotransferase (ASST) transfers a sulfate group from phenolic sulfate esters to a phenolic acceptor substrate.	3.58706e-29
CP026692.1\|AVH70737.1\|2380746_2381784_-\|aldo/keto-reductase	gnl\|CDD\|381320	cd19094, AKR_Tas-like, Escherichia coli Tas protein and similar proteins. Escherichia coli Tas protein is the prototype of this family. It is an NADP(H)-dependent aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NADP(H) as a hydride donor.	0

>CP026692.1|AVH70742.1|2386109_2387240_-|UDP-N-acetylglucosamine-2-epimerase
MTNQKRVCIILGTRPEAIKLAPVIQVFQKSSELQLQVILTGQHREMVEQVMQLFNIKSDYNLEIMQVQQSLNDITCRSLQGLEALFKVKKPDLVIVQGDTTTAFAAALAAFYQKIPIGHVEAGLRTDDIFNPYPEEANRRLISQITQLHFAPTPWAVENLHRSGVLGEIHMTGNTVIDALLNVAATQVVCNVPGLDWESYRVLLATVHRRENWGEPLLAIAQSFLQILDKFPDTALLLPLHRNPTVRVPLQELLGNHPRIFLTDPLDYGELVGAIGRSHLLLTDSGGLQEEAPSLGKPVLVLRDTTERPEAVVAGTAKLVGTTTENIFAAAAELLSYSDAYEAMANAINPFGDGHAAERILQIVENYLGISSETST
>CP026692.1|AVH70741.1|2385293_2385884_+|peptidoglycan-binding-protein
MEYLAYSHMFIAQEEASGNTKYHLPQPQFNWKKLLKSSAWLALAGVGVLFAAVTQIQMSSAAYVKTNGSCLRVRSGPSTNYSYVDCVPNGATLPTIERYENGFARLSTGRYIFARWIGDRPNNRPVTRPGGVGGSVILTPGSKGLLVRDVQTALGNLRVDGIYGQETVSRVRSFQQSKGLLVDGVVGPETRSALGI
>CP026692.1|AVH70740.1|2384612_2385023_+|response-regulator-receiver-protein
MSNQSMSFQGLRLLVVDDDTDTRILLTFLFELEGAEVIAAASADKALKIMSSFKPDILISDICLPDEDGCSLLLKVKNLEAKRGRKIPAIALTASTFEGDRERALLAGYDIYQCKPIDLDELTSIVATLTRTEQYV
>CP026692.1|AVH70739.1|2383706_2384417_+|Crp/Fnr-family-transcriptional-regulator
MNEKTFKPQVNRLLAALPTSDYQRLVPHLKLVSLSTRQVIYESGEPIAHVYFPQHGVVSLVANMKNGSMMEVGIVSSEGMVGIPIILGGNTTTTKAFVQVSGAAMRMDTDVLKTELNQGGAIQNLLLRYVQAVYTELAQGCACNRFHTIEERLARWLLTVSDRLQSEDFPLTQEFIAQMLGVRRSGVTVAANTLSQTRMIRYQRGHISILKREDLSATSCECYRVIQNEFTRLLGN
>CP026692.1|AVH70738.1|2382879_2383626_+|Crp/Fnr-family-transcriptional-regulator
MSLDKNALEQPANKLLAALPASEYQRLVPHLKLVSLEVQQILYEAGEPITQVYFPDKSMISIVTTMEDGSTAEVGIVSSEGMVGIPVILGSRITTTTSFMQISGAAMQMNADVLRAEFNRGGALQNLLLCYVQAIYSELAQAAACNRLHTLDERLARWLLTVSDRVESEDFALTQEFIAQMLGVRRSGVTVAASTLSQAGMISYKRGHISILNREDLEATSCECYRVIQNEFARLLGMKPNNRAKKIF
>CP026692.1|AVH70737.1|2380746_2381784_-|aldo/keto-reductase
MKYNQLGKSDLKVSETCLGTMTYGQQNTIEEAHEQLDYSIAQGVNFIDAAEMYPVPTSGETYGLTETYIGKWLKRQQRDQLIIATKIAGPGRGFKWVRGGAKAIDRDNIKQAVDDSLKRLQTDYIDLYQIHWPDRYVPRFGQTVFDPTQVEKTIPIPEQLAVFADVIKAGKIRYIGLSNETPWGVAQFSNAAKQLGLPKVVSIQNAYNLLNRVFDGALAEAVYQEEIGLLAYSPLAFGFLTGKYLNGKPEKARVTLFENFGQRYLKPKVGQAVAAYVEIAKRHQLSPAHLALAFVRSRWFVPSTIIGATTLEQLKENLESVNVVLNKDILEELDIVHAQSPNPAP
>CP026692.1|AVH70736.1|2379494_2380622_-|arylsulfotransferase
MTFTVTSVDQNTIRRRGTGLKAYNPEKVFKGYTLFTPLTGQGEVYLLNLEGEVVHQWNLPYPPGLYGYLLPNGNLFYNGKTPPEEPLRFALWAAFKSGVVLEADPKGNIIWEYKHPDHHHDGRRLANGNTIILAIEKIPQSLVPRIKGGVPGTEPDGDIYADVLYEVTPAGEIVWTWHAHEHLDPDIFTITPQDHRHEWTHGNTVDELADGNIIVSFRNISTVAIIDRKTGEIIWTLGDDVLAQQHFPNELANGNILIFDNGAHRRNIALNFSRVIEVNRQTKEIVWEYTDNPPQNFFSAYISGAQRLANGNTLITEGAYGRIFEVTVTGEIVWEYINPHFASRNIPGEKSPVTRGEQNTVFRAFRYAPEEVPWL
>CP026692.1|AVH70735.1|2378583_2379255_-|glutathione-S-transferase
MAEIKVYSAVVCPYAHRTRLVLQEKGINFDLIEIDLQNKPEGFTKVSPYGKVPAITHGDNRVWESAVINEYLDEVFPNPPLLPSSHIDRAQARIWIDFANTRFVPAFSTLLRSSDPEKQEEAKQELYKHLEFIENEGLAKLSGEGPYWFGESISLVDFTYFPWFERWTALKQYRGFGIPEQFTRLRQWKHALKERESVKAIAHSKEFYIERYAKFAAPTLAAV
>CP026692.1|AVH70734.1|2377492_2378506_+|NADPH:quinone-oxidoreductase
MKAYEIQSNAGIDALALVDRPEPKPTDGQVLIQVKATSLNYRDLLVAQGAYGAGQKYPLIPMSDGAGEVVAVGEGVTRVKIGDRVAGTFFQDWIYGSLTKEKMKSDLGGGIDGMLAEYVLLHQEGLVILPDYLSYLEGATLPCAAVTAWHGLVTKGNIGAGDSILLLGTGGVSIFALQFAKLHGARAIITSSSDEKLARAKQLGADETINYKTTPDWEKQVYQLTNRTGVDHVVEVGGAGTLPKSLQAVRIGGRISLIGVLSGTGNEIDPMPILFKSLTVQGIYVGSREMFEAMNQAMQQHQIKPIIDRVFPFTEAREAYHYLKSAAHFGKVVICNS
>CP026692.1|AVH70733.1|2376292_2377315_+|TPR-repeat-containing-protein
MRQPLNRVKEWEQRRDEANRYYQRGKFQESLDLATKNLHLARAIPDRAREGYTLNDLGLAHLSCRQPQKALERFYQALSVAIEIGNTPAEATALSNLGSTYSHLGRFSQALEYFDKALPIFRRSQDTQNEVSTLNDIALIYTRLGEPKRSLLLQHQILRMRRLLGDFSGEATTLNGIGFAYNVLGKFEQALEFFQAALPIQRAVKNLLAEATTLNNIASVYHDLGKPKEALLLYNQVLLTRRAISDRSGEATTLHNIGFTYSTLAEHRQAMKFYKQAIVIYQELGDNLGEISTLLNMGSLYATTKRKKMARSCYQNAQELAEQIEYQPLLEKVQQFIDSL
>CP026692.1|AVH70744.1|2388603_2389887_+|twitching-motility-protein-PilT
MTESQSPLNSNSAAGRNLPPMPPPPPPIPTFITQRQMTQTLDMSIDRGTNLPVAGHRPGSPPPIPNSVRPQNSSPEITLEKLIREAYDQGYSDLHLGVGEPPRFRSRGEIQSGDYPETDKETFMNWLREVMSEGEIQRFEESLEFDGATQYEFARVRINVFGSLKGPAMVLRLIPLKILTMEQLRLPPIFRDICHHHKGLILVTGPTGSGKSTTMAAMIDYINKEMAKHIITIEDPIEFVHQSRKSLVKQREVGMHTRKFDNALKAALREDPDLILVGEMRDKETVNTALKAAQTGHLVMGTLHTNSAVKTIERILNLYSGDEQDAMRVAISESLVAVIAQGLCRTTDGKRAAFHDVLINTEAIKEWIKDGKYDEIGELMKQAGFDGMITMNQSLLNLYQDGRITEETALEMSPTPNEMAQFLRGRV
>CP026692.1|AVH70745.1|2390056_2390824_+|KaiB-domain-containing-protein
MNNLTTNKLSTPQLFKGIALFTPGGDLIYCIDPSKQGRWHLHLCSALQEILDLPEPPHFLVPCYTATIDNWLDPRTQQVRTFAEAYPAVIRHQALLNAIFGTEELVWQAAPWQEGLCDRMVLTTYHSSFGQLWEDHDLIVRLDLSEPVPKYHQPVIVQKKEAITQGYVLRLFVAGHSSSTERILQNLHELLERSLGHPYTLKVIDVLSHPEQAELNQVSATPTLVKVWPHPIRRIVGELDHVEKILQMLAAKEKF
>CP026692.1|AVH70746.1|2393906_2394785_+|lipoyl-synthase
MTVKPDWLRVKAPGRERIGNVKEILRDLALNTVCEEASCPNIGECFNAGTATFLIMGPACTRACPYCDIDFEKKPKPLDPTEPTRLAQAVRRMNLNHVVITSVNRDDLLDGGASQFMACIDAVNSVSPNTTIEVLIPDLCGNWNALESILQAAPEVLNHNTETVPRLYRRVRPQGNYDRTLELLQRTRKLSPSTYTKSGIMVGLGETDAEIRQVMQDLRTVDCDILTIGQYLQPSQKHLQVNEFVNPEQFANWKAFGEEIGFLQVVSSPLTRSSYHAEQVRELMERYPRFKS
>CP026692.1|AVH70747.1|2394809_2395742_+|glycerol-3-phosphate-dehydrogenase
MYSNSKLSVAILGAGAWGASLANLAIANGHLVRVWSRQGSQIQTVLKDVQIVLSAISMIGVRDVASQVESFPLSPETIFVTATKGLDPQTTCTPSQIWQTIFPNHAVVVLSGPNLSKEIQMELPAATVVASNIPTAAEVVQLVFSSQRFRVYTNPDPLGVELGGTLKNVIAIAAGVCDGLQLGTNAKAALVTRGLTEMVRIGNNWGAKTETFYGLSGLGDLLATCNSPLSRNYQVGYQLAGGKSLTETLANLQGTAEGVNTCRVLMQRAKQQNIAVPITEQVYRLLQGEITPGQALDELMLRDIKPEYNY
>CP026692.1|AVH70748.1|2396551_2397802_+|RNA-polymerase-sigma-factor-SigC
MPATSFYADAPYNTKKSSQALDSDLTVDESELSVDDLQELEMATVDNTNFAASTNRRSTDLVRLYLQEIGRVRLLGRDEEVSEAQKVQRYLRMRIVLANAAKLGDAVITPYLRLIEVQERLTSELGHRPSLERWAATADIVLSDLRPTLADGKRRWAEIAKLTVEELEQVQSQGLQAKEHMIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGITRAIATSSRTIRLPVHITEKLNKIKKAQRKIAQEKGRTPTLEDLATELEMTPTQVREVLLRVPRSVSLETKVGKDKDTELGELLETDSVTPEEMLMRESLQRDLHHLLSDLTSRERDVILMRFGLADGHPYSLAEIGRALDLSRERVRQIESKALQKLRQPKRRNLIRDYLESLS
>CP026692.1|AVH70749.1|2398222_2398678_+|Fur-family-transcriptional-regulator
MTVYTTTSLKAELNDRGWRLTPQRETILHIFQELPQGEHLSAEDLYHRLETDGEGISLSTIYRTLKLMARMGILRELELGEGHKHYEINQPYPHHHHHLICVRCNSTIEFKNDSILKIGAKTAQKEGFHLLDCQMTIHAVCPKCQRALMPL
>CP026692.1|AVH70750.1|2398810_2399950_-|peptidoglycan-binding-protein
MENLAYLHLAFAYEDSTPSELVSLSSLFNKAAAPDWKRLSGRAWKYMMPLALSLSILSAVSSVMALEKGDQGPSVRNLQQNLKTAGFYQASVTQVYDVSTQEAVQRFQKAAGLPVDGIVGGSTLQKLESWQAKKPTNTATQAKKTTAVSAQAKKPSTTSSASSATSKRRNPNYLAKGDEGEDVRTLQERLRVAGFYYGNATGIFGPITEESVKRFQDSYKLSVDGIAGPATLGKLPGVGIGDGEEAPKKVVNRDKLRVGDRGEPVRIVQEQLIQAGYLEGEPNGYYGPYTADAVKRFQAANFLSASGVAGPTTRAKLYSSVNTASKSEFNTLEIQTRLRERGFYKGKLNGVMADDTKKAIKQAQEFYGISLKDLKSGRF
>CP026692.1|AVH70751.1|2399959_2404138_-|cobaltochelatase-CobN-subunit
MHRTSSTSGGWNQSEGLIFIEQTPAPFVLITAADTDIQTLAAAVTKLPVSFPALRVANLLQLQQQLSIDTYGEQVLEHAQVIILRLLGGRSYWGYGLEVVQEIVQRNGRTLIVMPGDDAFDPDLISQSTVPLGVVNQVWQYFSEGGVENFVNALQFISDSCLLTAYNPPPPQPIPRVGLYEWGVGSGEQGSRGAGEQRGRRELELRSSTSETRSSTFELDESTSELRSSTFELDESTSELRSSTFELDESTSELRSSTFELDESTSELRSSTFELDESTSELRSSTSEAQGFQYPMPHAPCPIPKIGILFYRAHYLAGNTKVIDALCEALVQKNLQPVPVFVSSLREPDVQVELSEFFQPKEAESIAVLLNTTSFSLARLESETPQTDLWQKLDVPVLQVILSGGSIEQWESQFQGLSPRDIGMNVALPEVDGRIITRAVSFKALQTRNPHLETDVVIYEPVSDRIEFVAKLAANWARLRSKPPQERRIALILANYPNRNGRLANGVGLDTPASCVEILQALHLAGYEVENPPAQGDELIQRLTAGVTNDPEGQEWLPVHQSVSWEEYQEYFASLPPAVQQGISERWDKPILDSIQNPKSKIQNWAVPGIQLGNIFVGIQPARGYDNDPSLNYHAPDLEPTHAYLAFYYWVRETFGADAVVHVGKHGNLEWLPGKSVALSSNCYPEVAFGALPHLYPFIVNDPGEGSQAKRRAQAVIIDHLTPPMTRAELYGSLQQLENLIDEYYEADSLDPSRLPVIRDRIRELVIKENLHLDLGFHYETEIFNSESLILNSIGGYLCELKEAQIRDGLHIFGQCPQGRQLRDLIVAIARIPNRHSSGITRAIAQDWGLDFDPLTADLSMTSGEYSIVNGTECRTLGDIVEVLEEHAALLVEQLINQDSCTDAIHRVSPLSTDAMNRVSTWIRDRLLPALQQTDQEITHLLHGLDGGYVPSAPSGAPTRGRPEVLPTGRNFYSVDIRAIPTETAWDIGRKAAETLVEYYTQEHGEYPKTLGLSMWGTATMRTGGDDIAEALALLGVQPVWDGAARRVVDFEILPLAILGRPRVDVTLRISGFFRDAFPNLIDLFDQAVSAVADLDEPPEQNPLADAVRQETDLWTSQGLTLEAAVVRSRYRIFGSRPGAYGAGLQGLIESQNWTDDEDLARAYINWSSYAYSSGAGAGGAGGAGGAGEDKNFNPQSPIPNAEAFKQRLAQMQVVLHNQDNREHDLLDSDDYYQFQGGLTAAVRSLQGKNPQTYFGDNSIPAQPRVRQLKEEIARVYRSRVVNPKWIAGVMRHGYKGAFEMAATVDFLFAYDATAKCVEDYMYQGIVEAYLLDPVVSEFIQEKNPYALRDIAEKLLEAHKRNLWEDVNIGTLEALRNLVHQAEAVIEEKSMV
>CP026692.1|AVH70752.1|2406367_2407198_-|alpha-L-glutamate-ligase
MLNNISLLLKACKNLNISYEILHPSENLIKIKLNSKQHYFCNYSTPLLNQAVAHLIKDKEYTYHVLNKKVNLPRTVGFLSPFCDSQYKIYLKFPTIPDIVLEIKENFETPVIIKRNSGAGGHNVFLCDNLNEIETALKEIFTINNKYDYVALAQEFIHIKSEYRAVFLNKELVLLYEKDITDAKFVGNLSPLHWDGAKAKYINDPQILSEITNFAQPVFQELDIDYGGFDIVLDRDNQYWLIEINSHPNFSLFIRDNGEEPILRIFEKMLISLASN
>CP026692.1|AVH70753.1|2407281_2408157_-|hypothetical-protein
MSQDNQSKPTDKKVNQPPQKPYQRVQPFWKTKIIQLLQGTIGVLEVTVEKLETAPQPGTEEKPGFFQQLQLWWGGLLRTIRLFLPSNLSTKLSDTALTGIVTGIAVILVWTTTTIFTGKPTEVATVPPVEEVPIPTPRVTTPPESVAPEPQPPEEITPPPEVQTTPPTPSPSPEPIPTPTPTPTPIIELTPEQALIAAIENQVVEISDRIASGLIKSIQANFRTSNLTVKISDDWYTLNESQQDKLAAKILQRSQELDFTHLEITDSQNRLIARNPIVGTEIVIFKRQTAS

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Crispr_ID: CP026692_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_13

2391077-2393564

Orphan

I-D,II-B

Consensus_repeat	Method
ATCGCAATCAAATAAAATCCCTATTAGGG----------ATTGAAAC	PILER-CR
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CRISPRCasFinder
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CRT

34 spacers

The CRISPR arrays of CP026692_13

>merge|CP026692|13|2391077-2393564|PILER-CR,CRISPRCasFinder,CRT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACAAATGCGATCGCACGTTCACTGGGTAAATCTTTAATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACTTCACATAAATTTAACTGGCACAAGCCGAAACCCGCTATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACAATGACTTGATAGATAACAATGCCCCAATTTTTGATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACAGAAGTGGTTGGTGCTGGTATGGACTATGCAGCTAATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACAACAATCCTTCTCTCGCTGGTAATTTCCGGTTTAGATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACGGATTGGCTACTATGGCATGAGATAGACCTACCAGATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACCAATCATTTGCAGGTTGCAAATCTGCCAGCCTATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACGCCAAATGAACCGCCAGCAGCCGCTAAAGTGGCATATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACTGAGTACTCAGACATTAAAAAGCATTTTTTCCCTATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACAATTACCTTTGCCTGATTTAACAAACTAGCAGAATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACTAGCTGTATCTGCTGCTCTAGACTTGCATCACGGCATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACTCAGTGCCTTTATGTCTTCAATTGTGTCATCAAAGCATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACCCGGTATCAGTAATGGTAGATGCTGACTTCTTGGCATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACAAATCATCTCTAGACTGGGCATTATAGCGGTCTTTAAATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACAGTAAAAGTCAAGGGGTACGCACAGATTCTTTTTATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACTTACTCAAGCCGAAATTAACGCCACAGTTGCTAAGGAAGATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACTTTTCACCATCCCAGAGAACAGTTACAAAGGGATAATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACTTCCATACAAGAATTTTAATGCATTTAAGAAGAATATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACAAAAACAAGAAAAATGCCAAGCCTAAATAAAGATTATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACTTTTGGGAACAACTTGTAAAACTGCTTTAGCAAATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACGCCTGCCACCCATCCCCAGCACCAGTAACCTTCCAATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACTATACGGAATCGACTTGTAATGTTGATTACATGAATATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACAAGGAAATCTACCCTGCCCTGAATGCGGTAAACATATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACAGCTTTTGACGCTGCCACCGAAAATCCTGCCTTATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACTTAATTGTGGCTGATGATAATGAAAATTATTCCCAAATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACGATACCACCAACCTTAAACAATTTACCCAACGCCTATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACGAATAACCAAAGCACAAGAAACTGTTGCTGCTGCCATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACGCTTTCTCAAAAATTTGCTCTACTACATCATAGTCAAATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACCTTAAAATACAACAGCAAATCTAACTTGCTAGGAATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACCTCGCGTTCGGGGATGCGGCTACCAAATAATCCCCATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACAAAAGCTTATATTGACTTCCTGGAAAATAAGCGTAACATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACGTATTGGGCAATGCTCCATGCCATTTCTAGTTGGATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACGTTACCAATCAAAATGCCGTAAGACCTCGAAGTGTGCATCGCAATCAAATAAAATCCCTATTAGGGATTGAAACATTGCTTACTCGACGATCAACCCTTAAAACTCCCGCATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC

>CP026692|13|4|2391077-2393564|PILER-CR
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAATGCGATCGCACGTTCACTGGGTAAATCTTTA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTCACATAAATTTAACTGGCACAAGCCGAAACCCGCT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AATGACTTGATAGATAACAATGCCCCAATTTTTG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AGAAGTGGTTGGTGCTGGTATGGACTATGCAGCTA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AACAATCCTTCTCTCGCTGGTAATTTCCGGTTTAG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GGATTGGCTACTATGGCATGAGATAGACCTACCAG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CAATCATTTGCAGGTTGCAAATCTGCCAGCCT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GCCAAATGAACCGCCAGCAGCCGCTAAAGTGGCAT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TGAGTACTCAGACATTAAAAAGCATTTTTTCCCT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AATTACCTTTGCCTGATTTAACAAACTAGCAGA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TAGCTGTATCTGCTGCTCTAGACTTGCATCACGGC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TCAGTGCCTTTATGTCTTCAATTGTGTCATCAAAGC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CCGGTATCAGTAATGGTAGATGCTGACTTCTTGGC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAATCATCTCTAGACTGGGCATTATAGCGGTCTTTAA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AGTAAAAGTCAAGGGGTACGCACAGATTCTTTTT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTACTCAAGCCGAAATTAACGCCACAGTTGCTAAGGAAG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTTTCACCATCCCAGAGAACAGTTACAAAGGGATA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTCCATACAAGAATTTTAATGCATTTAAGAAGAAT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAAAACAAGAAAAATGCCAAGCCTAAATAAAGATT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTTTGGGAACAACTTGTAAAACTGCTTTAGCAA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GCCTGCCACCCATCCCCAGCACCAGTAACCTTCCA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TATACGGAATCGACTTGTAATGTTGATTACATGAAT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAGGAAATCTACCCTGCCCTGAATGCGGTAAACAT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AGCTTTTGACGCTGCCACCGAAAATCCTGCCTT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTAATTGTGGCTGATGATAATGAAAATTATTCCCAA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GATACCACCAACCTTAAACAATTTACCCAACGCCT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GAATAACCAAAGCACAAGAAACTGTTGCTGCTGCC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GCTTTCTCAAAAATTTGCTCTACTACATCATAGTCAA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CTTAAAATACAACAGCAAATCTAACTTGCTAGGA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CTCGCGTTCGGGGATGCGGCTACCAAATAATCCCC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAAAGCTTATATTGACTTCCTGGAAAATAAGCGTAAC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GTATTGGGCAATGCTCCATGCCATTTCTAGTTGG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GTTACCAATCAAAATGCCGTAAGACCTCGAAGTGTGC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	ATTGCTTACTCGACGATCAACCCTTAAAACTCCCGC
ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC

>CP026692|13|12|2391077-2393564|CRISPRCasFinder
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAATGCGATCGCACGTTCACTGGGTAAATCTTTA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTCACATAAATTTAACTGGCACAAGCCGAAACCCGCT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AATGACTTGATAGATAACAATGCCCCAATTTTTG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AGAAGTGGTTGGTGCTGGTATGGACTATGCAGCTA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AACAATCCTTCTCTCGCTGGTAATTTCCGGTTTAG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GGATTGGCTACTATGGCATGAGATAGACCTACCAG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CAATCATTTGCAGGTTGCAAATCTGCCAGCCT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GCCAAATGAACCGCCAGCAGCCGCTAAAGTGGCAT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TGAGTACTCAGACATTAAAAAGCATTTTTTCCCT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AATTACCTTTGCCTGATTTAACAAACTAGCAGA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TAGCTGTATCTGCTGCTCTAGACTTGCATCACGGC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TCAGTGCCTTTATGTCTTCAATTGTGTCATCAAAGC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CCGGTATCAGTAATGGTAGATGCTGACTTCTTGGC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAATCATCTCTAGACTGGGCATTATAGCGGTCTTTAA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AGTAAAAGTCAAGGGGTACGCACAGATTCTTTTT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTACTCAAGCCGAAATTAACGCCACAGTTGCTAAGGAAG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTTTCACCATCCCAGAGAACAGTTACAAAGGGATA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTCCATACAAGAATTTTAATGCATTTAAGAAGAAT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAAAACAAGAAAAATGCCAAGCCTAAATAAAGATT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTTTGGGAACAACTTGTAAAACTGCTTTAGCAA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GCCTGCCACCCATCCCCAGCACCAGTAACCTTCCA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TATACGGAATCGACTTGTAATGTTGATTACATGAAT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAGGAAATCTACCCTGCCCTGAATGCGGTAAACAT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AGCTTTTGACGCTGCCACCGAAAATCCTGCCTT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTAATTGTGGCTGATGATAATGAAAATTATTCCCAA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GATACCACCAACCTTAAACAATTTACCCAACGCCT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GAATAACCAAAGCACAAGAAACTGTTGCTGCTGCC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GCTTTCTCAAAAATTTGCTCTACTACATCATAGTCAA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CTTAAAATACAACAGCAAATCTAACTTGCTAGGA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CTCGCGTTCGGGGATGCGGCTACCAAATAATCCCC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAAAGCTTATATTGACTTCCTGGAAAATAAGCGTAAC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GTATTGGGCAATGCTCCATGCCATTTCTAGTTGG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GTTACCAATCAAAATGCCGTAAGACCTCGAAGTGTGC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	ATTGCTTACTCGACGATCAACCCTTAAAACTCCCGC
ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC

>CP026692|13|5|2391077-2393564|CRT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAATGCGATCGCACGTTCACTGGGTAAATCTTTA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTCACATAAATTTAACTGGCACAAGCCGAAACCCGCT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AATGACTTGATAGATAACAATGCCCCAATTTTTG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AGAAGTGGTTGGTGCTGGTATGGACTATGCAGCTA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AACAATCCTTCTCTCGCTGGTAATTTCCGGTTTAG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GGATTGGCTACTATGGCATGAGATAGACCTACCAG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CAATCATTTGCAGGTTGCAAATCTGCCAGCCT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GCCAAATGAACCGCCAGCAGCCGCTAAAGTGGCAT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TGAGTACTCAGACATTAAAAAGCATTTTTTCCCT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AATTACCTTTGCCTGATTTAACAAACTAGCAGA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TAGCTGTATCTGCTGCTCTAGACTTGCATCACGGC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TCAGTGCCTTTATGTCTTCAATTGTGTCATCAAAGC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CCGGTATCAGTAATGGTAGATGCTGACTTCTTGGC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAATCATCTCTAGACTGGGCATTATAGCGGTCTTTAA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AGTAAAAGTCAAGGGGTACGCACAGATTCTTTTT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTACTCAAGCCGAAATTAACGCCACAGTTGCTAAGGAAG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTTTCACCATCCCAGAGAACAGTTACAAAGGGATA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTCCATACAAGAATTTTAATGCATTTAAGAAGAAT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAAAACAAGAAAAATGCCAAGCCTAAATAAAGATT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTTTGGGAACAACTTGTAAAACTGCTTTAGCAA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GCCTGCCACCCATCCCCAGCACCAGTAACCTTCCA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TATACGGAATCGACTTGTAATGTTGATTACATGAAT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAGGAAATCTACCCTGCCCTGAATGCGGTAAACAT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AGCTTTTGACGCTGCCACCGAAAATCCTGCCTT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	TTAATTGTGGCTGATGATAATGAAAATTATTCCCAA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GATACCACCAACCTTAAACAATTTACCCAACGCCT
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GAATAACCAAAGCACAAGAAACTGTTGCTGCTGCC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GCTTTCTCAAAAATTTGCTCTACTACATCATAGTCAA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CTTAAAATACAACAGCAAATCTAACTTGCTAGGA
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	CTCGCGTTCGGGGATGCGGCTACCAAATAATCCCC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	AAAAGCTTATATTGACTTCCTGGAAAATAAGCGTAAC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GTATTGGGCAATGCTCCATGCCATTTCTAGTTGG
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	GTTACCAATCAAAATGCCGTAAGACCTCGAAGTGTGC
ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC	ATTGCTTACTCGACGATCAACCCTTAAAACTCCCGC
ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH70745.1\|2390056_2390824_+\|KaiB-domain-containing-protein	unknown	unknown	gnl\|CDD\|239276
CP026692.1\|AVH70751.1\|2399959_2404138_-\|cobaltochelatase-CobN-subunit	unknown	unknown	gnl\|CDD\|235663
CP026692.1\|AVH70739.1\|2383706_2384417_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
CP026692.1\|AVH70738.1\|2382879_2383626_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
CP026692.1\|AVH70749.1\|2398222_2398678_+\|Fur-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366663
CP026692.1\|AVH70755.1\|2409215_2410565_+\|SMC-domain-protein	unknown	unknown	gnl\|CDD\|226459
CP026692.1\|AVH70747.1\|2394809_2395742_+\|glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|237771
CP026692.1\|AVH70740.1\|2384612_2385023_+\|response-regulator-receiver-protein	unknown	unknown	gnl\|CDD\|381118
CP026692.1\|AVH70752.1\|2406367_2407198_-\|alpha-L-glutamate-ligase	unknown	unknown	gnl\|CDD\|223267
CP026692.1\|AVH70748.1\|2396551_2397802_+\|RNA-polymerase-sigma-factor-SigC	unknown	unknown	gnl\|CDD\|236067
CP026692.1\|AVH70753.1\|2407281_2408157_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
CP026692.1\|AVH70750.1\|2398810_2399950_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|225943
CP026692.1\|AVH70741.1\|2385293_2385884_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
CP026692.1\|AVH70744.1\|2388603_2389887_+\|twitching-motility-protein-PilT	unknown	unknown	gnl\|CDD\|225364
CP026692.1\|AVH70746.1\|2393906_2394785_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
CP026692.1\|AVH70742.1\|2386109_2387240_-\|UDP-N-acetylglucosamine-2-epimerase	unknown	unknown	gnl\|CDD\|272978
CP026692.1\|AVH70743.1\|2387501_2387873_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH70736.1\|2379494_2380622_-\|arylsulfotransferase	unknown	unknown	gnl\|CDD\|368677
CP026692.1\|AVH70754.1\|2408292_2409210_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277324
CP026692.1\|AVH70737.1\|2380746_2381784_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381320

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH70745.1\|2390056_2390824_+\|KaiB-domain-containing-protein	gnl\|CDD\|239276	cd02978, KaiB_like, KaiB-like family; composed of the circadian clock proteins, KaiB and the N-terminal KaiB-like sensory domain of SasA. KaiB is an essential protein in maintaining circadian rhythm. It was originally discovered from the cyanobacterium Synechococcus as part of the circadian clock gene cluster, kaiABC. KaiB attenuates KaiA-enhanced KaiC autokinase activity by interacting with KaiA-KaiC complexes in a circadian fashion. KaiB is membrane-associated as well as cytosolic. The amount of membrane-associated protein peaks in the evening (at circadian time (CT) 12-16) while the cytosolic form peaks later (at CT 20). The rhythmic localization of KaiB may function in regulating the formation of Kai complexes. SasA is a sensory histidine kinase which associates with KaiC. Although it is not an essential oscillator component, it is important in enhancing kaiABC expression and is important in metabolic growth control under day/night cycle conditions. SasA contains an N-terminal sensory domain with a TRX fold which is involved in the SasA-KaiC interaction. This domain shows high sequence similarity with KaiB. However, the KaiB structure does not show a classical TRX fold. The N-terminal half of KaiB shares the same beta-alpha-beta topology as TRX, but the topology of its C-terminal half diverges.	6.80487e-31
CP026692.1\|AVH70751.1\|2399959_2404138_-\|cobaltochelatase-CobN-subunit	gnl\|CDD\|235663	PRK05989, cobN, cobaltochelatase subunit CobN; Reviewed.	0
CP026692.1\|AVH70739.1\|2383706_2384417_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	7.04259e-27
CP026692.1\|AVH70738.1\|2382879_2383626_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	4.37516e-23
CP026692.1\|AVH70749.1\|2398222_2398678_+\|Fur-family-transcriptional-regulator	gnl\|CDD\|366663	pfam01475, FUR, Ferric uptake regulator family. This family includes metal ion uptake regulator proteins, that bind to the operator DNA and controls transcription of metal ion-responsive genes. This family is also known as the FUR family.	3.20289e-48
CP026692.1\|AVH70747.1\|2394809_2395742_+\|glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|237771	PRK14619, PRK14619, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional.	0
CP026692.1\|AVH70740.1\|2384612_2385023_+\|response-regulator-receiver-protein	gnl\|CDD\|381118	cd17580, REC_2_DhkD-like, second phosphoacceptor receiver (REC) domain of Dictyostelium discoideum hybrid signal transduction histidine kinase D and similar domains. Dictyostelium discoideum hybrid signal transduction histidine kinase D (DhkD) is a large protein that contains two histidine kinase (HK) and two REC domains on the intracellular side of a single pass transmembrane domain, and extracellular PAS and PAC domains that likely are involved in ligand binding. This model represents the second REC domain and similar domains. DhkD activates the cAMP phosphodiesterase RegA to ensure proper prestalk and prespore patterning, tip formation, and the vertical elongation of the mound into a finger, in Dictyostelium discoideum. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.04856e-36
CP026692.1\|AVH70752.1\|2406367_2407198_-\|alpha-L-glutamate-ligase	gnl\|CDD\|223267	COG0189, RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis].	6.0265e-15
CP026692.1\|AVH70748.1\|2396551_2397802_+\|RNA-polymerase-sigma-factor-SigC	gnl\|CDD\|236067	PRK07598, PRK07598, RNA polymerase sigma factor SigC; Validated.	0
CP026692.1\|AVH70753.1\|2407281_2408157_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	3.4055e-06
CP026692.1\|AVH70750.1\|2398810_2399950_-\|peptidoglycan-binding-protein	gnl\|CDD\|225943	COG3409, COG3409, Putative peptidoglycan-binding domain-containing protein [Cell envelope biogenesis, outer membrane].	7.34976e-24
CP026692.1\|AVH70741.1\|2385293_2385884_+\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	6.01589e-12
CP026692.1\|AVH70744.1\|2388603_2389887_+\|twitching-motility-protein-PilT	gnl\|CDD\|225364	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].	0
CP026692.1\|AVH70746.1\|2393906_2394785_+\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
CP026692.1\|AVH70742.1\|2386109_2387240_-\|UDP-N-acetylglucosamine-2-epimerase	gnl\|CDD\|272978	TIGR00236, UDP-N-acetylglucosamine_2-epimerase, UDP-N-acetylglucosamine 2-epimerase. This cytosolic enzyme converts UDP-N-acetyl-D-glucosamine to UDP-N-acetyl-D-mannosamine. In E. coli, this is the first step in the pathway of enterobacterial common antigen biosynthesis.Members of this orthology group have many gene symbols, often reflecting the overall activity of the pathway and/or operon that includes it. Symbols include epsC (exopolysaccharide C) in Burkholderia solanacerum, cap8P (type 8 capsule P) in Staphylococcus aureus, and nfrC in an older designation based on the effects of deletion on phage N4 adsorption. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
CP026692.1\|AVH70755.1\|2409215_2410565_+\|SMC-domain-protein	gnl\|CDD\|226459	COG3950, COG3950, Predicted ATP-binding protein involved in virulence [General function prediction only].	1.32184e-44
CP026692.1\|AVH70736.1\|2379494_2380622_-\|arylsulfotransferase	gnl\|CDD\|368677	pfam05935, Arylsulfotrans, Arylsulfotransferase (ASST). This family consists of several bacterial Arylsulfotransferase proteins. Arylsulfotransferase (ASST) transfers a sulfate group from phenolic sulfate esters to a phenolic acceptor substrate.	3.58706e-29
CP026692.1\|AVH70754.1\|2408292_2409210_+\|metallophosphoesterase	gnl\|CDD\|277324	cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.85803e-38
CP026692.1\|AVH70737.1\|2380746_2381784_-\|aldo/keto-reductase	gnl\|CDD\|381320	cd19094, AKR_Tas-like, Escherichia coli Tas protein and similar proteins. Escherichia coli Tas protein is the prototype of this family. It is an NADP(H)-dependent aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NADP(H) as a hydride donor.	0

>CP026692.1|AVH70745.1|2390056_2390824_+|KaiB-domain-containing-protein
MNNLTTNKLSTPQLFKGIALFTPGGDLIYCIDPSKQGRWHLHLCSALQEILDLPEPPHFLVPCYTATIDNWLDPRTQQVRTFAEAYPAVIRHQALLNAIFGTEELVWQAAPWQEGLCDRMVLTTYHSSFGQLWEDHDLIVRLDLSEPVPKYHQPVIVQKKEAITQGYVLRLFVAGHSSSTERILQNLHELLERSLGHPYTLKVIDVLSHPEQAELNQVSATPTLVKVWPHPIRRIVGELDHVEKILQMLAAKEKF
>CP026692.1|AVH70744.1|2388603_2389887_+|twitching-motility-protein-PilT
MTESQSPLNSNSAAGRNLPPMPPPPPPIPTFITQRQMTQTLDMSIDRGTNLPVAGHRPGSPPPIPNSVRPQNSSPEITLEKLIREAYDQGYSDLHLGVGEPPRFRSRGEIQSGDYPETDKETFMNWLREVMSEGEIQRFEESLEFDGATQYEFARVRINVFGSLKGPAMVLRLIPLKILTMEQLRLPPIFRDICHHHKGLILVTGPTGSGKSTTMAAMIDYINKEMAKHIITIEDPIEFVHQSRKSLVKQREVGMHTRKFDNALKAALREDPDLILVGEMRDKETVNTALKAAQTGHLVMGTLHTNSAVKTIERILNLYSGDEQDAMRVAISESLVAVIAQGLCRTTDGKRAAFHDVLINTEAIKEWIKDGKYDEIGELMKQAGFDGMITMNQSLLNLYQDGRITEETALEMSPTPNEMAQFLRGRV
>CP026692.1|AVH70743.1|2387501_2387873_-|hypothetical-protein
MVSAQSSNQGKTYSLLMIKSFLIWTFTLAVCLLVVGFPLVVLMATVGCLLSIILQSVMPVSAVLLVAGALIMFNVMAVVLAAGVLTLKGVHPSEVKWLSWLHGEADQMQVTVYAACPLTCEIK
>CP026692.1|AVH70742.1|2386109_2387240_-|UDP-N-acetylglucosamine-2-epimerase
MTNQKRVCIILGTRPEAIKLAPVIQVFQKSSELQLQVILTGQHREMVEQVMQLFNIKSDYNLEIMQVQQSLNDITCRSLQGLEALFKVKKPDLVIVQGDTTTAFAAALAAFYQKIPIGHVEAGLRTDDIFNPYPEEANRRLISQITQLHFAPTPWAVENLHRSGVLGEIHMTGNTVIDALLNVAATQVVCNVPGLDWESYRVLLATVHRRENWGEPLLAIAQSFLQILDKFPDTALLLPLHRNPTVRVPLQELLGNHPRIFLTDPLDYGELVGAIGRSHLLLTDSGGLQEEAPSLGKPVLVLRDTTERPEAVVAGTAKLVGTTTENIFAAAAELLSYSDAYEAMANAINPFGDGHAAERILQIVENYLGISSETST
>CP026692.1|AVH70741.1|2385293_2385884_+|peptidoglycan-binding-protein
MEYLAYSHMFIAQEEASGNTKYHLPQPQFNWKKLLKSSAWLALAGVGVLFAAVTQIQMSSAAYVKTNGSCLRVRSGPSTNYSYVDCVPNGATLPTIERYENGFARLSTGRYIFARWIGDRPNNRPVTRPGGVGGSVILTPGSKGLLVRDVQTALGNLRVDGIYGQETVSRVRSFQQSKGLLVDGVVGPETRSALGI
>CP026692.1|AVH70740.1|2384612_2385023_+|response-regulator-receiver-protein
MSNQSMSFQGLRLLVVDDDTDTRILLTFLFELEGAEVIAAASADKALKIMSSFKPDILISDICLPDEDGCSLLLKVKNLEAKRGRKIPAIALTASTFEGDRERALLAGYDIYQCKPIDLDELTSIVATLTRTEQYV
>CP026692.1|AVH70739.1|2383706_2384417_+|Crp/Fnr-family-transcriptional-regulator
MNEKTFKPQVNRLLAALPTSDYQRLVPHLKLVSLSTRQVIYESGEPIAHVYFPQHGVVSLVANMKNGSMMEVGIVSSEGMVGIPIILGGNTTTTKAFVQVSGAAMRMDTDVLKTELNQGGAIQNLLLRYVQAVYTELAQGCACNRFHTIEERLARWLLTVSDRLQSEDFPLTQEFIAQMLGVRRSGVTVAANTLSQTRMIRYQRGHISILKREDLSATSCECYRVIQNEFTRLLGN
>CP026692.1|AVH70738.1|2382879_2383626_+|Crp/Fnr-family-transcriptional-regulator
MSLDKNALEQPANKLLAALPASEYQRLVPHLKLVSLEVQQILYEAGEPITQVYFPDKSMISIVTTMEDGSTAEVGIVSSEGMVGIPVILGSRITTTTSFMQISGAAMQMNADVLRAEFNRGGALQNLLLCYVQAIYSELAQAAACNRLHTLDERLARWLLTVSDRVESEDFALTQEFIAQMLGVRRSGVTVAASTLSQAGMISYKRGHISILNREDLEATSCECYRVIQNEFARLLGMKPNNRAKKIF
>CP026692.1|AVH70737.1|2380746_2381784_-|aldo/keto-reductase
MKYNQLGKSDLKVSETCLGTMTYGQQNTIEEAHEQLDYSIAQGVNFIDAAEMYPVPTSGETYGLTETYIGKWLKRQQRDQLIIATKIAGPGRGFKWVRGGAKAIDRDNIKQAVDDSLKRLQTDYIDLYQIHWPDRYVPRFGQTVFDPTQVEKTIPIPEQLAVFADVIKAGKIRYIGLSNETPWGVAQFSNAAKQLGLPKVVSIQNAYNLLNRVFDGALAEAVYQEEIGLLAYSPLAFGFLTGKYLNGKPEKARVTLFENFGQRYLKPKVGQAVAAYVEIAKRHQLSPAHLALAFVRSRWFVPSTIIGATTLEQLKENLESVNVVLNKDILEELDIVHAQSPNPAP
>CP026692.1|AVH70736.1|2379494_2380622_-|arylsulfotransferase
MTFTVTSVDQNTIRRRGTGLKAYNPEKVFKGYTLFTPLTGQGEVYLLNLEGEVVHQWNLPYPPGLYGYLLPNGNLFYNGKTPPEEPLRFALWAAFKSGVVLEADPKGNIIWEYKHPDHHHDGRRLANGNTIILAIEKIPQSLVPRIKGGVPGTEPDGDIYADVLYEVTPAGEIVWTWHAHEHLDPDIFTITPQDHRHEWTHGNTVDELADGNIIVSFRNISTVAIIDRKTGEIIWTLGDDVLAQQHFPNELANGNILIFDNGAHRRNIALNFSRVIEVNRQTKEIVWEYTDNPPQNFFSAYISGAQRLANGNTLITEGAYGRIFEVTVTGEIVWEYINPHFASRNIPGEKSPVTRGEQNTVFRAFRYAPEEVPWL
>CP026692.1|AVH70746.1|2393906_2394785_+|lipoyl-synthase
MTVKPDWLRVKAPGRERIGNVKEILRDLALNTVCEEASCPNIGECFNAGTATFLIMGPACTRACPYCDIDFEKKPKPLDPTEPTRLAQAVRRMNLNHVVITSVNRDDLLDGGASQFMACIDAVNSVSPNTTIEVLIPDLCGNWNALESILQAAPEVLNHNTETVPRLYRRVRPQGNYDRTLELLQRTRKLSPSTYTKSGIMVGLGETDAEIRQVMQDLRTVDCDILTIGQYLQPSQKHLQVNEFVNPEQFANWKAFGEEIGFLQVVSSPLTRSSYHAEQVRELMERYPRFKS
>CP026692.1|AVH70747.1|2394809_2395742_+|glycerol-3-phosphate-dehydrogenase
MYSNSKLSVAILGAGAWGASLANLAIANGHLVRVWSRQGSQIQTVLKDVQIVLSAISMIGVRDVASQVESFPLSPETIFVTATKGLDPQTTCTPSQIWQTIFPNHAVVVLSGPNLSKEIQMELPAATVVASNIPTAAEVVQLVFSSQRFRVYTNPDPLGVELGGTLKNVIAIAAGVCDGLQLGTNAKAALVTRGLTEMVRIGNNWGAKTETFYGLSGLGDLLATCNSPLSRNYQVGYQLAGGKSLTETLANLQGTAEGVNTCRVLMQRAKQQNIAVPITEQVYRLLQGEITPGQALDELMLRDIKPEYNY
>CP026692.1|AVH70748.1|2396551_2397802_+|RNA-polymerase-sigma-factor-SigC
MPATSFYADAPYNTKKSSQALDSDLTVDESELSVDDLQELEMATVDNTNFAASTNRRSTDLVRLYLQEIGRVRLLGRDEEVSEAQKVQRYLRMRIVLANAAKLGDAVITPYLRLIEVQERLTSELGHRPSLERWAATADIVLSDLRPTLADGKRRWAEIAKLTVEELEQVQSQGLQAKEHMIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGITRAIATSSRTIRLPVHITEKLNKIKKAQRKIAQEKGRTPTLEDLATELEMTPTQVREVLLRVPRSVSLETKVGKDKDTELGELLETDSVTPEEMLMRESLQRDLHHLLSDLTSRERDVILMRFGLADGHPYSLAEIGRALDLSRERVRQIESKALQKLRQPKRRNLIRDYLESLS
>CP026692.1|AVH70749.1|2398222_2398678_+|Fur-family-transcriptional-regulator
MTVYTTTSLKAELNDRGWRLTPQRETILHIFQELPQGEHLSAEDLYHRLETDGEGISLSTIYRTLKLMARMGILRELELGEGHKHYEINQPYPHHHHHLICVRCNSTIEFKNDSILKIGAKTAQKEGFHLLDCQMTIHAVCPKCQRALMPL
>CP026692.1|AVH70750.1|2398810_2399950_-|peptidoglycan-binding-protein
MENLAYLHLAFAYEDSTPSELVSLSSLFNKAAAPDWKRLSGRAWKYMMPLALSLSILSAVSSVMALEKGDQGPSVRNLQQNLKTAGFYQASVTQVYDVSTQEAVQRFQKAAGLPVDGIVGGSTLQKLESWQAKKPTNTATQAKKTTAVSAQAKKPSTTSSASSATSKRRNPNYLAKGDEGEDVRTLQERLRVAGFYYGNATGIFGPITEESVKRFQDSYKLSVDGIAGPATLGKLPGVGIGDGEEAPKKVVNRDKLRVGDRGEPVRIVQEQLIQAGYLEGEPNGYYGPYTADAVKRFQAANFLSASGVAGPTTRAKLYSSVNTASKSEFNTLEIQTRLRERGFYKGKLNGVMADDTKKAIKQAQEFYGISLKDLKSGRF
>CP026692.1|AVH70751.1|2399959_2404138_-|cobaltochelatase-CobN-subunit
MHRTSSTSGGWNQSEGLIFIEQTPAPFVLITAADTDIQTLAAAVTKLPVSFPALRVANLLQLQQQLSIDTYGEQVLEHAQVIILRLLGGRSYWGYGLEVVQEIVQRNGRTLIVMPGDDAFDPDLISQSTVPLGVVNQVWQYFSEGGVENFVNALQFISDSCLLTAYNPPPPQPIPRVGLYEWGVGSGEQGSRGAGEQRGRRELELRSSTSETRSSTFELDESTSELRSSTFELDESTSELRSSTFELDESTSELRSSTFELDESTSELRSSTFELDESTSELRSSTSEAQGFQYPMPHAPCPIPKIGILFYRAHYLAGNTKVIDALCEALVQKNLQPVPVFVSSLREPDVQVELSEFFQPKEAESIAVLLNTTSFSLARLESETPQTDLWQKLDVPVLQVILSGGSIEQWESQFQGLSPRDIGMNVALPEVDGRIITRAVSFKALQTRNPHLETDVVIYEPVSDRIEFVAKLAANWARLRSKPPQERRIALILANYPNRNGRLANGVGLDTPASCVEILQALHLAGYEVENPPAQGDELIQRLTAGVTNDPEGQEWLPVHQSVSWEEYQEYFASLPPAVQQGISERWDKPILDSIQNPKSKIQNWAVPGIQLGNIFVGIQPARGYDNDPSLNYHAPDLEPTHAYLAFYYWVRETFGADAVVHVGKHGNLEWLPGKSVALSSNCYPEVAFGALPHLYPFIVNDPGEGSQAKRRAQAVIIDHLTPPMTRAELYGSLQQLENLIDEYYEADSLDPSRLPVIRDRIRELVIKENLHLDLGFHYETEIFNSESLILNSIGGYLCELKEAQIRDGLHIFGQCPQGRQLRDLIVAIARIPNRHSSGITRAIAQDWGLDFDPLTADLSMTSGEYSIVNGTECRTLGDIVEVLEEHAALLVEQLINQDSCTDAIHRVSPLSTDAMNRVSTWIRDRLLPALQQTDQEITHLLHGLDGGYVPSAPSGAPTRGRPEVLPTGRNFYSVDIRAIPTETAWDIGRKAAETLVEYYTQEHGEYPKTLGLSMWGTATMRTGGDDIAEALALLGVQPVWDGAARRVVDFEILPLAILGRPRVDVTLRISGFFRDAFPNLIDLFDQAVSAVADLDEPPEQNPLADAVRQETDLWTSQGLTLEAAVVRSRYRIFGSRPGAYGAGLQGLIESQNWTDDEDLARAYINWSSYAYSSGAGAGGAGGAGGAGEDKNFNPQSPIPNAEAFKQRLAQMQVVLHNQDNREHDLLDSDDYYQFQGGLTAAVRSLQGKNPQTYFGDNSIPAQPRVRQLKEEIARVYRSRVVNPKWIAGVMRHGYKGAFEMAATVDFLFAYDATAKCVEDYMYQGIVEAYLLDPVVSEFIQEKNPYALRDIAEKLLEAHKRNLWEDVNIGTLEALRNLVHQAEAVIEEKSMV
>CP026692.1|AVH70752.1|2406367_2407198_-|alpha-L-glutamate-ligase
MLNNISLLLKACKNLNISYEILHPSENLIKIKLNSKQHYFCNYSTPLLNQAVAHLIKDKEYTYHVLNKKVNLPRTVGFLSPFCDSQYKIYLKFPTIPDIVLEIKENFETPVIIKRNSGAGGHNVFLCDNLNEIETALKEIFTINNKYDYVALAQEFIHIKSEYRAVFLNKELVLLYEKDITDAKFVGNLSPLHWDGAKAKYINDPQILSEITNFAQPVFQELDIDYGGFDIVLDRDNQYWLIEINSHPNFSLFIRDNGEEPILRIFEKMLISLASN
>CP026692.1|AVH70753.1|2407281_2408157_-|hypothetical-protein
MSQDNQSKPTDKKVNQPPQKPYQRVQPFWKTKIIQLLQGTIGVLEVTVEKLETAPQPGTEEKPGFFQQLQLWWGGLLRTIRLFLPSNLSTKLSDTALTGIVTGIAVILVWTTTTIFTGKPTEVATVPPVEEVPIPTPRVTTPPESVAPEPQPPEEITPPPEVQTTPPTPSPSPEPIPTPTPTPTPIIELTPEQALIAAIENQVVEISDRIASGLIKSIQANFRTSNLTVKISDDWYTLNESQQDKLAAKILQRSQELDFTHLEITDSQNRLIARNPIVGTEIVIFKRQTAS
>CP026692.1|AVH70754.1|2408292_2409210_+|metallophosphoesterase
MKLKRRQFVFLSSISAISTGFLSWMFAHQNHQSADISDSTTAIAANPAKKDLLLRFVSVADTGTGAKGQYAVARAMNAYHQKNPYDLVVLAGDNIYNNGEIEKINAVFERPYQGLLKQGVKFQACLGNHDIRTDNGDPQVKYAGFNMKGRYYTFRRGTVQFFALDTNSNADWKNQLPWLEKELSLSNAPWKVVFGHHPIYSSGQYGNNPDFIKTFTPLFQKYGVQLYINGHEHSYERTRAINGTTYLICGAGAGNRPVGRSEWTGYSTSDLSFASYEVYKDRIEISAIATNNRVFDKGIIQLKSA
>CP026692.1|AVH70755.1|2409215_2410565_+|SMC-domain-protein
MKVKRLKMQSFRGIGDLTLEFDETSPTALIGINGVGKSSILDCLAILLSQLIRDIADAESIGKNRSLGGVNFYVVSKIRNEYEKSIPGKPDIEKRFFSKEDITNGQKKTHNTIKIFLQSKEVSWFLTNFSKERNEELNKENAELNAVSQDIYRKWEANPQFNLPLAVYYPVKRSVLGIDMEITETHSLKQIDAYDQALNGVQISFHRFFQWFRSLEDLENEERRDNPEFKTQQLEAVRQSIYSLIPGFSNLRVRRSPLRMTVRKQDEELTVNQLSDGEKCLLAMVGDLARRLAIANPSLPDPLEGEGVVLIDEIELHLHPKWQREIIPALTRTFPNCQFIVTTHSPQVISQVKPEGIYILEKTDEGVVAKKPESSFGRDSNRILENLMGVPERPQEIKESLLELFRLIDAGNIEGARQLRQQLANEIGADEPEFVKADVLIRRKEILNR

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Crispr_ID: CP026692_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_14

2693486-2693591

Orphan

Consensus_repeat	Method
CAGAGCAAGTAAATTTATTTATGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026692_14

>merge|CP026692|14|2693486-2693591|CRISPRCasFinder
CAGAGCAAGTAAATTTATTTATGGAAAATAAAAAAATGTATTTCGAGATACGTAGTGCAAGAAATACTACGTCAGTTGACTCAGAGCAACTAAATTTATTTATGGA

>CP026692|14|13|2693486-2693591|CRISPRCasFinder
CAGAGCAAGTAAATTTATTTATGGA	AAATAAAAAAATGTATTTCGAGATACGTAGTGCAAGAAATACTACGTCAGTTGACT
CAGAGCAACTAAATTTATTTATGGA

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH70988.1\|2686631_2688638_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
CP026692.1\|AVH70999.1\|2702548_2703046_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH70992.1\|2692157_2693081_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH70996.1\|2698945_2699320_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH70987.1\|2685270_2686632_+\|HlyD-family-secretion-protein	unknown	unknown	gnl\|CDD\|235136
CP026692.1\|AVH70993.1\|2693804_2695190_-\|AtzE-family-amidohydrolase	unknown	unknown	gnl\|CDD\|236409
CP026692.1\|AVH70984.1\|2678752_2679262_+\|GCN5-related-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP026692.1\|AVH70989.1\|2688653_2689760_+\|ABC-transporter	unknown	unknown	gnl\|CDD\|378925
CP026692.1\|AVH70998.1\|2700777_2702127_-\|MATE-efflux-family-protein	unknown	unknown	gnl\|CDD\|240536
CP026692.1\|AVH71001.1\|2704177_2704546_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71000.1\|2703518_2703974_-\|protein-of-unknown-function-DUF4288	unknown	unknown	gnl\|CDD\|379479
CP026692.1\|AVH70983.1\|2677370_2678696_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224635
CP026692.1\|AVH70990.1\|2689776_2690916_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
CP026692.1\|AVH70995.1\|2695952_2698082_-\|carbohydrate-binding-protein	unknown	unknown	gnl\|CDD\|374209
CP026692.1\|AVH71002.1\|2704831_2707423_+\|voltage-gated-chloride-channel-protein	unknown	unknown	gnl\|CDD\|238504
CP026692.1\|AVH70985.1\|2680029_2680440_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH70991.1\|2691241_2691829_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH70997.1\|2699523_2700714_-\|major-facilitator-superfamily-transporter	unknown	unknown	gnl\|CDD\|340882
CP026692.1\|AVH70994.1\|2695186_2695375_-\|protein-of-unknown-function-DUF4089	unknown	unknown	gnl\|CDD\|372560
CP026692.1\|AVH70986.1\|2684532_2685171_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH70988.1\|2686631_2688638_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	8.70072e-87
CP026692.1\|AVH70987.1\|2685270_2686632_+\|HlyD-family-secretion-protein	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	2.90888e-28
CP026692.1\|AVH70993.1\|2693804_2695190_-\|AtzE-family-amidohydrolase	gnl\|CDD\|236409	PRK09201, PRK09201, AtzE family amidohydrolase.	0
CP026692.1\|AVH70984.1\|2678752_2679262_+\|GCN5-related-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.3046e-10
CP026692.1\|AVH70989.1\|2688653_2689760_+\|ABC-transporter	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	2.31389e-24
CP026692.1\|AVH70998.1\|2700777_2702127_-\|MATE-efflux-family-protein	gnl\|CDD\|240536	cd13131, MATE_NorM_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Vibrio cholerae NorM. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Vibrio cholerae NorM and functions most likely as a multidrug efflux pump, removing xenobiotics from the interior of the cell. The pump utilizes a cation gradient across the membrane to facilitate the export process. NorM appears to bind monovalent cations in an outward-facing conformation and may subsequently cycle through an inward-facing and outward-facing conformation to capture and release its substrate.	8.81606e-139
CP026692.1\|AVH71002.1\|2704831_2707423_+\|voltage-gated-chloride-channel-protein	gnl\|CDD\|238504	cd01031, EriC, ClC chloride channel EriC. This domain is found in the EriC chloride transporters that mediate the extreme acid resistance response in eubacteria and archaea. This response allows bacteria to survive in the acidic environments by decarboxylation-linked proton utilization. As shown for Escherichia coli EriC, these channels can counterbalance the electric current produced by the outwardly directed virtual proton pump linked to amino acid decarboxylation. The EriC proteins belong to the ClC superfamily of chloride ion channels, which share a unique double-barreled architecture and voltage-dependent gating mechanism. The voltage-dependent gating is conferred by the permeating anion itself, acting as the gating charge. In Escherichia coli EriC, a glutamate residue that protrudes into the pore is thought to participate in gating by binding to a Cl- ion site within the selectivity filter.	3.27921e-163
CP026692.1\|AVH70983.1\|2677370_2678696_+\|hypothetical-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	4.89121e-82
CP026692.1\|AVH70990.1\|2689776_2690916_+\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	3.43114e-27
CP026692.1\|AVH70995.1\|2695952_2698082_-\|carbohydrate-binding-protein	gnl\|CDD\|374209	pfam15902, Sortilin-Vps10, Sortilin, neurotensin receptor 3,. Sortilin, also known in mammals as neurotensin receptor-3, is the archetypical member of a Vps10-domain (Vps10-D) that binds neurotrophic factors and neuropeptides. This domain constitutes the entire luminal part of Sortilin and is activated in the trans-Golgi network by enzymatic propeptide cleavage. The structure of the domain has been determined as a ten-bladed propeller, with up to 9 BNR or beta-hairpin turns in it. The mature receptor binds various ligands, including its own propeptide (Sort-pro), neurotensin, the pro-forms of nerve growth factor-beta (NGF)6 and brain-derived neurotrophic factor (BDNF)7, lipoprotein lipase (LpL), apo lipoprotein AV14 and the receptor-associated protein (RAP)1.	3.59929e-06
CP026692.1\|AVH71000.1\|2703518_2703974_-\|protein-of-unknown-function-DUF4288	gnl\|CDD\|379479	pfam14119, DUF4288, Domain of unknown function (DUF4288). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.	2.96921e-25
CP026692.1\|AVH70994.1\|2695186_2695375_-\|protein-of-unknown-function-DUF4089	gnl\|CDD\|372560	pfam13318, DUF4089, Protein of unknown function (DUF4089). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.	5.8775e-20
CP026692.1\|AVH70997.1\|2699523_2700714_-\|major-facilitator-superfamily-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.24002e-57

>CP026692.1|AVH70992.1|2692157_2693081_-|hypothetical-protein
MVESKQALDKQVENANRTTTDQFYTDSTGTNINAGVSGIEYTNRTTAGQSYAGSTDTNIDVGVSRPANAPTITPQSDARPANGGSNTTLNRALIGGLIGVTLGSLAGAFAGKRIGQGFKHTVKGIGDASKTIGDGLGQTAKGLGDAAKSVAEGTIQAVVGGAIDTAEGVADVAKQTVVGTLDTVQSTAEGVNQAVQVAADKAKDTAQNVADVAKQTAVGTLDAVQSTAEGVNQTVQGAADKAKDTAQNARLSEDQGNEYQAEIAATNPQIKNDEIGIGNIDGTSTVYISNSDQTDRIFGEPLMSVDE
>CP026692.1|AVH70991.1|2691241_2691829_-|hypothetical-protein
MNQQFSEQHEENIDLLTDQANSYTADRSTNNDLAKVAIGALIGATLGAIAAALTIKGTTEKVDQTVKSVGNAVKGATGSFKQTVTNVGNAIKTVADSVNETVKDVGDAVKDTALDVNSIAIDTVDAVKGTVVGVNDTVKNTVDIVKGAAEGVKDTVKGTVDVAKSAEDDTPSASQNANIPNNQTTYILVPLDKKQ
>CP026692.1|AVH70990.1|2689776_2690916_+|ABC-transporter-permease
MLQLLTNMFFSRLFNSSFWALLRKEINQILRDKQLIILMIIPPTMQLLLYGFALNPDVHNLKLGVIDYANVGASRELVQAMTSNSIFSIESAPTTEKDLSRQVEEGKLNLGVIIPSEFPRKLATKEAKIQVFIDGVDANAAGIASGYITQIIQNYNRNFGQTQLNFPVSLQVVFLYNPGLISSWYFVPGVMGLVLTLVGTLVSSIAVVREKDSGTLEQLLMTPAANWEILLSKILPLAFLLMGDILLALTLGQLVFGLPLRGNFLLFFGLSIIYLLVGISIGILLAMFSSSQQQVVLMSFFINMPILQTSGVLAPIEAMPPFFQVLSLLNPLRHYIAIVRGILLKGVGLDVLWMHILALLSIAVVLLTISLSKFRNQLS
>CP026692.1|AVH70989.1|2688653_2689760_+|ABC-transporter
MKRIFAQFTKELIQFQRDRLTLGLAFILPFMTLLIFGFAIRLESKNIPLIVQDFNRTNISNSYIERLYATNQFMPTQWSGNDPVRDAIDRGIAKAAVIIPPQFSRDVQAGRSATVQVLIDGTDVNNARVIKNSIQRVTNFFMQEQGLITFNNSVTPEIRLWFNPGRLESLYIVPGVYAVVLWIFPSLLTAISMVREKEKGTILQLYASSISATELLLGKGLAYLLIAILQAFVVMGLGSLIFQVSLVGDSITLLIGTLLFLIDSVLFGLLFGVRSSNQNAAVQSVSVIGFVTSLLLSGFIYPINNIPFPLSLMPNIVPARYFIDITRDAFVRGSGWAGVWFDLVVLIVFGLVFFNITRRALGKMQLPY
>CP026692.1|AVH70988.1|2686631_2688638_+|ABC-transporter-ATP-binding-protein
MDRKVTSGAQILPQTPSLATQSIYIRGLHKHYGRLAAVRGIDLTVQQGEMFGLIGPDGAGKTTTFHILGGVMEPTAGEVQIFGQLARDARSITGYLTQQFSLYLDLNINENLRYAAGLRQVPDDLFWTRRNHLLRLMNLEQFAKRQAGQLSGGMKQKLALCCVLISQPQVLLLDEPTTGVDPVSRREFWDVLAQLSAGGMTIVVATPYLDEAERCDRVALMYEGQIQKIGTPAALRSSLALHRLEVHTSNLQLSEQVLLQTAQANIVDVQTFGDRLDVLVKDITLGRRQVQELLQQQQLSFSIESNSPTLENVFVTHLRQQGLAAQFFPFPRAKATNQQWKVENYKLTVAAKDREINPSSSSIAIYAHNLNRFFGNFQAVKSVNLEVRHGEIFGLLGANGSGKTTTIKMLCGLLKASGGVISLGGETSNLRSTELRRRIGYMSQKFTLYDDLTILENLEFYCGVYGVPRKLRQEKIDWVIAICGLKGQEKMLTGQLPGGWKQRVAFGASVMHEPDILFLDEPTSGVDPLARRQFWKLINDFARNGTAILVTTHYLEEAEQCNRMSFMVAGETVISGSSSSIKASQPGQLIEVIVNQNQAAADLLKQHLDPWRVSIFADSLHIVLDDPDRELPQLLKLIESAQITISRVRPISFSLEDAFIGIVQRSQN
>CP026692.1|AVH70987.1|2685270_2686632_+|HlyD-family-secretion-protein
MAQTVSKYTESLPAPVEPTKQHRTKAVPLMLAMVTIAGIGYLFWSLQPQPRTDILKVSGRIEGYETKIGVKHSGRIESIAVREGAAVKKGQKLIGLDNSNDQLLQGQLQSANAQVASALSDEQQARSDVERVQGEIEEVNSQILEAQLNLQQSRGDTVGQVNQAQANTAAAKAQVVQAQAVLKQAAAEVKLAKINRDRYIKLLNDGAVTQQQSDQTQTTFDTAIATLQARQAAVNAASEQLSATQAALTQAQSTGFNPGIRNAQLEALRRKHAQTSAQMKSAWAQVKSAQAKVKVALASKQQLITQIQDSNKDLNVLSPLNGVVTARSVEPGAVVDSQTNILSVIDPYTIYLRGFIPEGDIGKVRQGQVAKILLDSAPNKPLRGKVIAIDAQASFTPENIYFQKDRVRQVVGIRISVENPASCFNPKQPYTGADLPCAKIGMPADAEILLKGK
>CP026692.1|AVH70986.1|2684532_2685171_+|hypothetical-protein
MGAILYPLYTVANLVLAIWSISLWQHSHNANILLLLLVVAGMTYDNLIISLGRLINEGSFLKLLNRLRFLLHDLLIPLLVVVAVQLASAAGVFWASKPILLSGCWTITFGLIGLALLTNFKHLELAPITFAGSLRYKPKNGQAPILTILIALLVGVAGFYIWREIQWPWMFVGTVVMLFGNALPTKIFGSLVGSAVDFAFILALLATQIVLS
>CP026692.1|AVH70985.1|2680029_2680440_-|hypothetical-protein
MPNNSKPLPQEDLYARINCVVQAKEHLEKEIQAISASASGEVAASSCSIVRYLAKGRNSAYWYYKLQASVAIFPTKTDGKSSRYKHLGKAGSQAYLDAVEQIFLKAKIEALDRSIKILNQGLKDLIEETSKYNKDY
>CP026692.1|AVH70984.1|2678752_2679262_+|GCN5-related-N-acetyltransferase
MLKIIQVETDKHNSHIQEVFWEYFNETKLIFSHKFGINLNINTFFEQYMTQLHEFLPPSGRLLLGQYEEKIAGCACLRKIGEDMGEIKRMYVRPEFCRKGTGRSLLEVIINEAAYIGYSKIRLDSAPFAKEAQALYHIFGFHNIEPYLEKTEISLEHRANWVFMELVLK
>CP026692.1|AVH70983.1|2677370_2678696_+|hypothetical-protein
MVPSKRVYLLLVLGIAIAPILSLFLIVRATIAITVLFNAIIFGLMVVDGLRVRRSRVQISRELPSRLSIGRDNPVVLKVTSPNNDTQIEIRDYYPTGFGVSAPALSAIVPSNSTEELTYTVHPTQRGEFPWGNIQVRQLGLWGLAWDDWQIPQSLPVKVYPDLVGLRSLTIRLTLQSSGSMRQSRKTGIGTEFAELRNYRTGDDLRFIDWKATARRVGAYGNAMPLVRVLEPEQEQTLLILLDRGRLMTAKVQNLQRFDWGLNATLFLALAGLHRGDRVGIGVFDRQMHTWIPPERGQHHLNQLIDRLTPIQPVLFESDYLGAVTNVLQRQTRRALVVVITDLVDVTASTELLAALSKLAPRYLPFCVTLRDPQVDRLAHTFTDDVASAYTRAVALDLLMQRQVAYAQLKQKGVLVLDAPANQIADQLVERYLQLKARNQL
>CP026692.1|AVH70993.1|2693804_2695190_-|AtzE-family-amidohydrolase
MNDAVSIAAAVREAKVSAVEVTKAALAQIAARDNQLNCFTAVTAKTALSDAAHIDRKIAQGNNPGTLAGVPFAVKNLFDIAGLTTLAGSKINAENPAATQDATAVAKLKQAGAVLVGALNMDEYAYGFVTENSHYGATHNPHDLQRVAGGSSGGSAAAVAAGLVPLTLGSDTNGSIRVPAALCGVFGFKPTYGRLSRAGVALFSSSFDHIGPFARSVQDIAMVFDVLQGEDDRDPICTKRPPELCLPQLKQDISDIRIAIAADYFTNAEPAALAAVQKVADAIEVTEYVIIPEAHRARAAAFVITASEGANLHLDKLRSHPEDFDLATRDRFLAGALIPSNWYLQAQRFRKWYRDRIREVFQNVDVILAPTTPISAPLIGEQTMILDGEEILVRPHLGLFTQPLSFIGLPVLSVPIQHPNALPLGVQLIAAPYNEALILRVAAALEAKGVVSAPVIFNAFN
>CP026692.1|AVH70994.1|2695186_2695375_-|protein-of-unknown-function-DUF4089
MRREEFDVGEYVDLMGLLLDLEIRDEYRDGVVANFERIMAIANLVNSFPLPEDIEVAPVFEP
>CP026692.1|AVH70995.1|2695952_2698082_-|carbohydrate-binding-protein
MSIRLFHIPLRKIIRFSILTLATTVALTTVEPSRSATTSEYQWNQVSIGGGGYVTNIYLHPLERNLAYIKTDIGGFYRWNSLEKRWIPLTDQFGPDKSNYYGGEGLALDPNNPNVIYIATGKYTKASLGTIFKSTNKGQTWSKLNIDLPMGGNETKRWTGERLGVNPFNSNIIFFGSRLDGLWKSVNAGQTWKKVSSFSGKPNAYIGITGILFSKKNAGLVYANAYGDGIYKSTDTGVTWSRITGSPSKVNRMALTSNGVLYVTHTSGVSKYANGAWSNITPTNIKTISFNGVSIDPKNSNHVLVTYDQYHESTNYSRVFQSTDGGTTWQQKSHSLNPQVPWWSNWYFASAASAIEFDPNIAGKVWLTDWFGTWQTDNINANKPIWSNYEKGHEQTVTFDLVSPPKGSLLLSGVADVEGFNHGQKLDTYPSTQLGGINGPWFQETYSIAYSEKDPLRMVRVGGHRGFNTFTGATSTDGGHTWKNFSSFPQNIMPLRVAMSATNPNLFVAIASEKQPIRTTNGGATWSGVLGLPNGSKGPWYWGQPLASDKVDGNIFYYYSGGKVYRSQDGAAYFSVVNSSLPSEDSSILKTVPGVSNEVWISLNSNGLYRSTNGGAKFAKIAGVEKAYLFAFGKPQTGSTIPALYLYGKIIGMGGGIFRSLDRGQTWTNISNPQNPIGNVPNVMEASRQQFGLVFIGTDGKGIYYGKPH
>CP026692.1|AVH70996.1|2698945_2699320_+|hypothetical-protein
MAETNENSLSNEPKQSNKTINIDGQRPVDPSSFEIKETINIDGERPIAKNENYSDKTIDIDGQRPIGKSNFQEQEMLAVDGERPIDPSDLEVEKILDIDGQRPIAKSKLKIKDTLEIDGSRPIA
>CP026692.1|AVH70997.1|2699523_2700714_-|major-facilitator-superfamily-transporter
MKKQISSNGLTKVQVLIMAIASGVCVANVYYNQPILKDIASSFQVSEGEAGSISVLSQVGYGFGLFFLIPLGDKINKKTLILSLLICLFCLLIFMTVSQNIVQVWILSVAIGITTVSAQIILPLAASIDRVTTGQTVGNIFTGILIGVLGARVFSGYIAEYLSWRYVYGFSAVMILIVTVLLKIYLPNVNNEYSGNYFDLLKSTIQQLKRFSLLREASLIGGLMFGVFCSFWTTLTFHLSGAPFNFQSDTIGMYGFVAIAGALMAPIFGKLADKGNSQRSLTISVCLVIASLLIAKIASSSALAIAVAVLLLDVGVQAIQVTNVARIYTLDAQSNSRINTVYMTTYFIGGAVGTSIGLLCWHFGGWNLVTWQMLVFTLLAFIVIVRPKITTASINK
>CP026692.1|AVH70998.1|2700777_2702127_-|MATE-efflux-family-protein
MFSEVKKCLMLAVPLAAAQLAQSATGFVDTVMMGWLGSQTIASGGLGAVIFSFCLLIITGIVSAVSPLAAEAYGAGNREKVGTIVRLGLRISLVLGIPITLLLYNGGALLLLLGQNANTVALAEIYLRAIALGFIPALGFGVLKSFLSALLQPQLVIVTVVLGTLFNITANYVLMFGKLGFPALGLAGIGWASTLSLWSMFVALTVYICNQPRFAVYGIFRPSSHEAFPLEHRRIVGEIFQVGLPIGGLIAVEGGLFTVVTFSIGQLGTNALAAHQIALQTISISFQMALGISLATTVRVGQLAGQNDLVGTRLAGYVGLAIAALSMGIVSLAFWLVPKSIICLYIDINNQNNADVVALAVKLLAVAAIFQIVDGVQVTAAGALRGLKDTQIPMLIGIFAYWCVGLFSGYIFGISLGFGAIGFWWGLAIGLAIAAIILTWRFSTRKTNN
>CP026692.1|AVH70999.1|2702548_2703046_+|hypothetical-protein
MRLPIAISAILVASLGFSAPVISQPPPIQVAKTPAPSSLAWEQFKINYRLWRRQKISNYRYEFTRSCNCLPKATEPVIIKVSNRVTTSITYKATKQPANAEFFQQYNTIPKLFDIIRDALIRKAANLTVQYDPILGYPTQINIDYNSQIADDEIFFTISNLQKIN
>CP026692.1|AVH71000.1|2703518_2703974_-|protein-of-unknown-function-DUF4288
MAYIPKNAKWYIAELVIECKVEGNPHNVVHVNIVLVRASSAEEAFEKAEELGYESNDTYLNPKNQTVTFTYRGLRSLNVIHDELEHGAELMFEEKIGIRESELQQMLTPKSQLAIFRPLKSIDPSKPDYRSKEIMDEVAKMMSGDGVIERL
>CP026692.1|AVH71001.1|2704177_2704546_+|hypothetical-protein
MNRFKKLSSIVFLLLAFIYPPTLVEAKDNTLNNVLNEQSIDVQTKLVGERSEEFLLAHRRTRRRYHRRHRTGRYYYQRQWNRGHYYRRHYRSIRYHGQRYRHGEWELVRDRHGRFMYDWQRY
>CP026692.1|AVH71002.1|2704831_2707423_+|voltage-gated-chloride-channel-protein
MLARGKILWLRLSRQLLQPRRLAFVEACLIGLVSGLAAVLLGQTVDWAGAWRVHLSYHWPAYLVLPGIGLVGGLLAGWLVERFAPEASGSGMSEVKAVLARVPMPLNLRIALVKLISATLVLGSGMPLGREGPTVQIGAALANQLSNWAPTSPEHRRQLIAAGAGAGLAAAFNAPIAGVLFVVEELLQDVSGITLGTAILASFIASVISRLYGSHSLDLNHLNLGLPDTTFFAQEIPFYLILGVLAGLLGILFNKGILESLAINRRLLHLSLPWRIGIAGLVSGAAIAFLPATFRDHAGLREILLVGSANWSFAAIALLVQFTLIIFTYGSGAPGGLLVPTLALGAALGYLVGAVEHSLLGMSAATVYAHVGMAAFFSAVSKVPITAVVIVFEMTTDFNLVLPLMIASVVAYLVAEKIDPRSLYDLLLEWKGIHITKEPSTEGFLAQLSAVDVMQRRVETLSSQMSTDEAVQAFSHSNHRNFPVLENGKVVGIVTQKDLVNIASQQSGKDTTVSEIMTPEPVTVTPIATLAHVLHILNRYHLSCLPVTEGRKLIGIITRSDIIRVEAERLSGNSEQIEPKSAPSYVVYQTRAPATGKGRLLVPLSHPQTAETLLDMAVAIAKDRNYEIECLQVIIVASGRIPSETPVQISKSLQLFQRAILLGEEWRIPVHTEIRVAHNVAGAILETVKARHIDMVLMGWKGSTSTPGRVFSRVVDTIIRQAACDVILAKLDDKRSFDRWLLPMAGGPNSSQAIKLLPALASLSTSPQIKLCQVFQPTNSIPDTTLLDKSVSFLQRRVSGKVVATPVCANSVSEAVLNCAKEDNSDVIVLGASRESLLQQAIHGNIAENISRKSNCTVIMVKT

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Crispr_ID: CP026692_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_16

2703297-2703402

Orphan

Consensus_repeat	Method
TACAGAGCAAGTAAATTTATTTATGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026692_16

>merge|CP026692|16|2703297-2703402|CRISPRCasFinder
TACAGAGCAAGTAAATTTATTTATGGAAAAAGAAAAAATGTATTTCGAGACGTGCAACGCAAGAAATACGGCGTCCTTGTTACAGAGCAAGTAAATTTATTTATGG

>CP026692|16|15|2703297-2703402|CRISPRCasFinder
TACAGAGCAAGTAAATTTATTTATGG	AAAAAGAAAAAATGTATTTCGAGACGTGCAACGCAAGAAATACGGCGTCCTTGT
TACAGAGCAAGTAAATTTATTTATGG

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH71008.1\|2716113_2717205_+\|protein-of-unknown-function-DUF4350	unknown	unknown	gnl\|CDD\|379527
CP026692.1\|AVH71005.1\|2712823_2713801_+\|Rieske-(2Fe-2S)-domain-containing-protein	unknown	unknown	gnl\|CDD\|226985
CP026692.1\|AVH70992.1\|2692157_2693081_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH70993.1\|2693804_2695190_-\|AtzE-family-amidohydrolase	unknown	unknown	gnl\|CDD\|236409
CP026692.1\|AVH70998.1\|2700777_2702127_-\|MATE-efflux-family-protein	unknown	unknown	gnl\|CDD\|240536
CP026692.1\|AVH70994.1\|2695186_2695375_-\|protein-of-unknown-function-DUF4089	unknown	unknown	gnl\|CDD\|372560
CP026692.1\|AVH71003.1\|2708303_2712005_+\|small-GTP-binding-protein	unknown	unknown	gnl\|CDD\|206741
CP026692.1\|AVH70999.1\|2702548_2703046_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71001.1\|2704177_2704546_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71002.1\|2704831_2707423_+\|voltage-gated-chloride-channel-protein	unknown	unknown	gnl\|CDD\|238504
CP026692.1\|AVH70990.1\|2689776_2690916_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
CP026692.1\|AVH71007.1\|2714906_2715524_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71006.1\|2713994_2714750_-\|TspO/MBR-related-protein	unknown	unknown	gnl\|CDD\|226007
CP026692.1\|AVH71009.1\|2717265_2718216_+\|magnesium-chelatase/MoxR-like-ATPase	unknown	unknown	gnl\|CDD\|223786
CP026692.1\|AVH70995.1\|2695952_2698082_-\|carbohydrate-binding-protein	unknown	unknown	gnl\|CDD\|374209
CP026692.1\|AVH70991.1\|2691241_2691829_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71004.1\|2712267_2712681_-\|SnoaL-like-domain-protein	unknown	unknown	gnl\|CDD\|378915
CP026692.1\|AVH70997.1\|2699523_2700714_-\|major-facilitator-superfamily-transporter	unknown	unknown	gnl\|CDD\|340882
CP026692.1\|AVH70996.1\|2698945_2699320_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71000.1\|2703518_2703974_-\|protein-of-unknown-function-DUF4288	unknown	unknown	gnl\|CDD\|379479

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH71008.1\|2716113_2717205_+\|protein-of-unknown-function-DUF4350	gnl\|CDD\|379527	pfam14258, DUF4350, Domain of unknown function (DUF4350). This domain family is found in bacteria, archaea and eukaryotes, and is approximately 70 amino acids in length.	5.74859e-12
CP026692.1\|AVH71005.1\|2712823_2713801_+\|Rieske-(2Fe-2S)-domain-containing-protein	gnl\|CDD\|226985	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only].	3.44804e-45
CP026692.1\|AVH70993.1\|2693804_2695190_-\|AtzE-family-amidohydrolase	gnl\|CDD\|236409	PRK09201, PRK09201, AtzE family amidohydrolase.	0
CP026692.1\|AVH71009.1\|2717265_2718216_+\|magnesium-chelatase/MoxR-like-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	7.57837e-107
CP026692.1\|AVH70994.1\|2695186_2695375_-\|protein-of-unknown-function-DUF4089	gnl\|CDD\|372560	pfam13318, DUF4089, Protein of unknown function (DUF4089). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.	5.8775e-20
CP026692.1\|AVH70997.1\|2699523_2700714_-\|major-facilitator-superfamily-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.24002e-57
CP026692.1\|AVH70998.1\|2700777_2702127_-\|MATE-efflux-family-protein	gnl\|CDD\|240536	cd13131, MATE_NorM_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Vibrio cholerae NorM. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Vibrio cholerae NorM and functions most likely as a multidrug efflux pump, removing xenobiotics from the interior of the cell. The pump utilizes a cation gradient across the membrane to facilitate the export process. NorM appears to bind monovalent cations in an outward-facing conformation and may subsequently cycle through an inward-facing and outward-facing conformation to capture and release its substrate.	8.81606e-139
CP026692.1\|AVH71002.1\|2704831_2707423_+\|voltage-gated-chloride-channel-protein	gnl\|CDD\|238504	cd01031, EriC, ClC chloride channel EriC. This domain is found in the EriC chloride transporters that mediate the extreme acid resistance response in eubacteria and archaea. This response allows bacteria to survive in the acidic environments by decarboxylation-linked proton utilization. As shown for Escherichia coli EriC, these channels can counterbalance the electric current produced by the outwardly directed virtual proton pump linked to amino acid decarboxylation. The EriC proteins belong to the ClC superfamily of chloride ion channels, which share a unique double-barreled architecture and voltage-dependent gating mechanism. The voltage-dependent gating is conferred by the permeating anion itself, acting as the gating charge. In Escherichia coli EriC, a glutamate residue that protrudes into the pore is thought to participate in gating by binding to a Cl- ion site within the selectivity filter.	3.27921e-163
CP026692.1\|AVH71003.1\|2708303_2712005_+\|small-GTP-binding-protein	gnl\|CDD\|206741	cd09914, RocCOR, Ras of complex proteins (Roc) C-terminal of Roc (COR) domain family. RocCOR (or Roco) protein family is characterized by a superdomain containing a Ras-like GTPase domain, called Roc (Ras of complex proteins), and a characteristic second domain called COR (C-terminal of Roc). A kinase domain and diverse regulatory domains are also often found in Roco proteins. Their functions are diverse; in Dictyostelium discoideum, which encodes 11 Roco proteins, they are involved in cell division, chemotaxis and development, while in human, where 4 Roco proteins (LRRK1, LRRK2, DAPK1, and MFHAS1) are encoded, these proteins are involved in epilepsy and cancer. Mutations in LRRK2 (leucine-rich repeat kinase 2) are known to cause familial Parkinson's disease.	1.10306e-74
CP026692.1\|AVH70990.1\|2689776_2690916_+\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	3.43114e-27
CP026692.1\|AVH70995.1\|2695952_2698082_-\|carbohydrate-binding-protein	gnl\|CDD\|374209	pfam15902, Sortilin-Vps10, Sortilin, neurotensin receptor 3,. Sortilin, also known in mammals as neurotensin receptor-3, is the archetypical member of a Vps10-domain (Vps10-D) that binds neurotrophic factors and neuropeptides. This domain constitutes the entire luminal part of Sortilin and is activated in the trans-Golgi network by enzymatic propeptide cleavage. The structure of the domain has been determined as a ten-bladed propeller, with up to 9 BNR or beta-hairpin turns in it. The mature receptor binds various ligands, including its own propeptide (Sort-pro), neurotensin, the pro-forms of nerve growth factor-beta (NGF)6 and brain-derived neurotrophic factor (BDNF)7, lipoprotein lipase (LpL), apo lipoprotein AV14 and the receptor-associated protein (RAP)1.	3.59929e-06
CP026692.1\|AVH71006.1\|2713994_2714750_-\|TspO/MBR-related-protein	gnl\|CDD\|226007	COG3476, COG3476, Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) [Signal transduction mechanisms].	6.84364e-41
CP026692.1\|AVH71004.1\|2712267_2712681_-\|SnoaL-like-domain-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	2.69649e-08
CP026692.1\|AVH71000.1\|2703518_2703974_-\|protein-of-unknown-function-DUF4288	gnl\|CDD\|379479	pfam14119, DUF4288, Domain of unknown function (DUF4288). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.	2.96921e-25

>CP026692.1|AVH70999.1|2702548_2703046_+|hypothetical-protein
MRLPIAISAILVASLGFSAPVISQPPPIQVAKTPAPSSLAWEQFKINYRLWRRQKISNYRYEFTRSCNCLPKATEPVIIKVSNRVTTSITYKATKQPANAEFFQQYNTIPKLFDIIRDALIRKAANLTVQYDPILGYPTQINIDYNSQIADDEIFFTISNLQKIN
>CP026692.1|AVH70998.1|2700777_2702127_-|MATE-efflux-family-protein
MFSEVKKCLMLAVPLAAAQLAQSATGFVDTVMMGWLGSQTIASGGLGAVIFSFCLLIITGIVSAVSPLAAEAYGAGNREKVGTIVRLGLRISLVLGIPITLLLYNGGALLLLLGQNANTVALAEIYLRAIALGFIPALGFGVLKSFLSALLQPQLVIVTVVLGTLFNITANYVLMFGKLGFPALGLAGIGWASTLSLWSMFVALTVYICNQPRFAVYGIFRPSSHEAFPLEHRRIVGEIFQVGLPIGGLIAVEGGLFTVVTFSIGQLGTNALAAHQIALQTISISFQMALGISLATTVRVGQLAGQNDLVGTRLAGYVGLAIAALSMGIVSLAFWLVPKSIICLYIDINNQNNADVVALAVKLLAVAAIFQIVDGVQVTAAGALRGLKDTQIPMLIGIFAYWCVGLFSGYIFGISLGFGAIGFWWGLAIGLAIAAIILTWRFSTRKTNN
>CP026692.1|AVH70997.1|2699523_2700714_-|major-facilitator-superfamily-transporter
MKKQISSNGLTKVQVLIMAIASGVCVANVYYNQPILKDIASSFQVSEGEAGSISVLSQVGYGFGLFFLIPLGDKINKKTLILSLLICLFCLLIFMTVSQNIVQVWILSVAIGITTVSAQIILPLAASIDRVTTGQTVGNIFTGILIGVLGARVFSGYIAEYLSWRYVYGFSAVMILIVTVLLKIYLPNVNNEYSGNYFDLLKSTIQQLKRFSLLREASLIGGLMFGVFCSFWTTLTFHLSGAPFNFQSDTIGMYGFVAIAGALMAPIFGKLADKGNSQRSLTISVCLVIASLLIAKIASSSALAIAVAVLLLDVGVQAIQVTNVARIYTLDAQSNSRINTVYMTTYFIGGAVGTSIGLLCWHFGGWNLVTWQMLVFTLLAFIVIVRPKITTASINK
>CP026692.1|AVH70996.1|2698945_2699320_+|hypothetical-protein
MAETNENSLSNEPKQSNKTINIDGQRPVDPSSFEIKETINIDGERPIAKNENYSDKTIDIDGQRPIGKSNFQEQEMLAVDGERPIDPSDLEVEKILDIDGQRPIAKSKLKIKDTLEIDGSRPIA
>CP026692.1|AVH70995.1|2695952_2698082_-|carbohydrate-binding-protein
MSIRLFHIPLRKIIRFSILTLATTVALTTVEPSRSATTSEYQWNQVSIGGGGYVTNIYLHPLERNLAYIKTDIGGFYRWNSLEKRWIPLTDQFGPDKSNYYGGEGLALDPNNPNVIYIATGKYTKASLGTIFKSTNKGQTWSKLNIDLPMGGNETKRWTGERLGVNPFNSNIIFFGSRLDGLWKSVNAGQTWKKVSSFSGKPNAYIGITGILFSKKNAGLVYANAYGDGIYKSTDTGVTWSRITGSPSKVNRMALTSNGVLYVTHTSGVSKYANGAWSNITPTNIKTISFNGVSIDPKNSNHVLVTYDQYHESTNYSRVFQSTDGGTTWQQKSHSLNPQVPWWSNWYFASAASAIEFDPNIAGKVWLTDWFGTWQTDNINANKPIWSNYEKGHEQTVTFDLVSPPKGSLLLSGVADVEGFNHGQKLDTYPSTQLGGINGPWFQETYSIAYSEKDPLRMVRVGGHRGFNTFTGATSTDGGHTWKNFSSFPQNIMPLRVAMSATNPNLFVAIASEKQPIRTTNGGATWSGVLGLPNGSKGPWYWGQPLASDKVDGNIFYYYSGGKVYRSQDGAAYFSVVNSSLPSEDSSILKTVPGVSNEVWISLNSNGLYRSTNGGAKFAKIAGVEKAYLFAFGKPQTGSTIPALYLYGKIIGMGGGIFRSLDRGQTWTNISNPQNPIGNVPNVMEASRQQFGLVFIGTDGKGIYYGKPH
>CP026692.1|AVH70994.1|2695186_2695375_-|protein-of-unknown-function-DUF4089
MRREEFDVGEYVDLMGLLLDLEIRDEYRDGVVANFERIMAIANLVNSFPLPEDIEVAPVFEP
>CP026692.1|AVH70993.1|2693804_2695190_-|AtzE-family-amidohydrolase
MNDAVSIAAAVREAKVSAVEVTKAALAQIAARDNQLNCFTAVTAKTALSDAAHIDRKIAQGNNPGTLAGVPFAVKNLFDIAGLTTLAGSKINAENPAATQDATAVAKLKQAGAVLVGALNMDEYAYGFVTENSHYGATHNPHDLQRVAGGSSGGSAAAVAAGLVPLTLGSDTNGSIRVPAALCGVFGFKPTYGRLSRAGVALFSSSFDHIGPFARSVQDIAMVFDVLQGEDDRDPICTKRPPELCLPQLKQDISDIRIAIAADYFTNAEPAALAAVQKVADAIEVTEYVIIPEAHRARAAAFVITASEGANLHLDKLRSHPEDFDLATRDRFLAGALIPSNWYLQAQRFRKWYRDRIREVFQNVDVILAPTTPISAPLIGEQTMILDGEEILVRPHLGLFTQPLSFIGLPVLSVPIQHPNALPLGVQLIAAPYNEALILRVAAALEAKGVVSAPVIFNAFN
>CP026692.1|AVH70992.1|2692157_2693081_-|hypothetical-protein
MVESKQALDKQVENANRTTTDQFYTDSTGTNINAGVSGIEYTNRTTAGQSYAGSTDTNIDVGVSRPANAPTITPQSDARPANGGSNTTLNRALIGGLIGVTLGSLAGAFAGKRIGQGFKHTVKGIGDASKTIGDGLGQTAKGLGDAAKSVAEGTIQAVVGGAIDTAEGVADVAKQTVVGTLDTVQSTAEGVNQAVQVAADKAKDTAQNVADVAKQTAVGTLDAVQSTAEGVNQTVQGAADKAKDTAQNARLSEDQGNEYQAEIAATNPQIKNDEIGIGNIDGTSTVYISNSDQTDRIFGEPLMSVDE
>CP026692.1|AVH70991.1|2691241_2691829_-|hypothetical-protein
MNQQFSEQHEENIDLLTDQANSYTADRSTNNDLAKVAIGALIGATLGAIAAALTIKGTTEKVDQTVKSVGNAVKGATGSFKQTVTNVGNAIKTVADSVNETVKDVGDAVKDTALDVNSIAIDTVDAVKGTVVGVNDTVKNTVDIVKGAAEGVKDTVKGTVDVAKSAEDDTPSASQNANIPNNQTTYILVPLDKKQ
>CP026692.1|AVH70990.1|2689776_2690916_+|ABC-transporter-permease
MLQLLTNMFFSRLFNSSFWALLRKEINQILRDKQLIILMIIPPTMQLLLYGFALNPDVHNLKLGVIDYANVGASRELVQAMTSNSIFSIESAPTTEKDLSRQVEEGKLNLGVIIPSEFPRKLATKEAKIQVFIDGVDANAAGIASGYITQIIQNYNRNFGQTQLNFPVSLQVVFLYNPGLISSWYFVPGVMGLVLTLVGTLVSSIAVVREKDSGTLEQLLMTPAANWEILLSKILPLAFLLMGDILLALTLGQLVFGLPLRGNFLLFFGLSIIYLLVGISIGILLAMFSSSQQQVVLMSFFINMPILQTSGVLAPIEAMPPFFQVLSLLNPLRHYIAIVRGILLKGVGLDVLWMHILALLSIAVVLLTISLSKFRNQLS
>CP026692.1|AVH71000.1|2703518_2703974_-|protein-of-unknown-function-DUF4288
MAYIPKNAKWYIAELVIECKVEGNPHNVVHVNIVLVRASSAEEAFEKAEELGYESNDTYLNPKNQTVTFTYRGLRSLNVIHDELEHGAELMFEEKIGIRESELQQMLTPKSQLAIFRPLKSIDPSKPDYRSKEIMDEVAKMMSGDGVIERL
>CP026692.1|AVH71001.1|2704177_2704546_+|hypothetical-protein
MNRFKKLSSIVFLLLAFIYPPTLVEAKDNTLNNVLNEQSIDVQTKLVGERSEEFLLAHRRTRRRYHRRHRTGRYYYQRQWNRGHYYRRHYRSIRYHGQRYRHGEWELVRDRHGRFMYDWQRY
>CP026692.1|AVH71002.1|2704831_2707423_+|voltage-gated-chloride-channel-protein
MLARGKILWLRLSRQLLQPRRLAFVEACLIGLVSGLAAVLLGQTVDWAGAWRVHLSYHWPAYLVLPGIGLVGGLLAGWLVERFAPEASGSGMSEVKAVLARVPMPLNLRIALVKLISATLVLGSGMPLGREGPTVQIGAALANQLSNWAPTSPEHRRQLIAAGAGAGLAAAFNAPIAGVLFVVEELLQDVSGITLGTAILASFIASVISRLYGSHSLDLNHLNLGLPDTTFFAQEIPFYLILGVLAGLLGILFNKGILESLAINRRLLHLSLPWRIGIAGLVSGAAIAFLPATFRDHAGLREILLVGSANWSFAAIALLVQFTLIIFTYGSGAPGGLLVPTLALGAALGYLVGAVEHSLLGMSAATVYAHVGMAAFFSAVSKVPITAVVIVFEMTTDFNLVLPLMIASVVAYLVAEKIDPRSLYDLLLEWKGIHITKEPSTEGFLAQLSAVDVMQRRVETLSSQMSTDEAVQAFSHSNHRNFPVLENGKVVGIVTQKDLVNIASQQSGKDTTVSEIMTPEPVTVTPIATLAHVLHILNRYHLSCLPVTEGRKLIGIITRSDIIRVEAERLSGNSEQIEPKSAPSYVVYQTRAPATGKGRLLVPLSHPQTAETLLDMAVAIAKDRNYEIECLQVIIVASGRIPSETPVQISKSLQLFQRAILLGEEWRIPVHTEIRVAHNVAGAILETVKARHIDMVLMGWKGSTSTPGRVFSRVVDTIIRQAACDVILAKLDDKRSFDRWLLPMAGGPNSSQAIKLLPALASLSTSPQIKLCQVFQPTNSIPDTTLLDKSVSFLQRRVSGKVVATPVCANSVSEAVLNCAKEDNSDVIVLGASRESLLQQAIHGNIAENISRKSNCTVIMVKT
>CP026692.1|AVH71003.1|2708303_2712005_+|small-GTP-binding-protein
MTQDELLVLIDRAVAEGWQELDLSGQELTELPVEIGKLQQLESLILGKKVEGYEEVGGRLLQKVSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEKLILIRVELTEIPDAIANLTNLRELVLSGNQITQIPEAIAKLTNLTQLDLFSNQITQIPEALANLTNLTQLDLSYNQITQIPEAITNLTNLRELHLNDNQITQIPEAIAKLTNLTQLHLSSNQITQIPETIANLTNLTQLILSYNQITQIPEALAKLTNLTQLHLNDNQITQISEAITNLTNLTQLHLYSNQITEIPEAIANLTNLTQLDLRYTKITEISAIANLTNLRELDLSYNQITEIPAIANLTNLRELHLNDNKITQIPEAIANLTNLTLLHLYSNKITEIPAIANLTNLTQLHLRYNKITEIPAIANLTNLTQLDLSYNQITKIPAIANLTNLRELHLNDNKITQIPEAIANLTNLTLLHLYSNQITEIPAIANLTNLTQLDLSYNQITEIPEAIAKLTNLTQLHLNDNKITQIPEAIANLTNLRELDLYSNQITEIPAIANLTNLTHLDLRYNKITEIPIEILNSKNAKEIFNYLRQIRTSETRPLHEAKLLLIGQGSVGKTSLIERLIRDKYDQNQSQTDGLNVETWNVQVNSKDIRLNVWDFGGQEIYHATHQFFLTKRSLYLLVCNCRTSEEENRIEYWLKLIESFGGKSPVIIVGNKKDEQPFDINRKALREKYPNIQDIIETSCQDNIGIDELRTAILQQVANLKEVYDLLPLTWFEVKQQLESMPQDFISYDDYICICYENKIREQQNREQLIDLLHRLGLVLNFRDHPILKDTNVLKPNWVTEGIYALLSDENLKTKTKGIFTPADLTRILDPERYPTKRHSYLIGLMKEFELCFALECYPPQFLIAGLLPKDQPDETELDDETLEFQYHYKVLPESIISRFIVNTHEKIHNQIYWRSGVMLQYQENNEPYNIARIKADPEDKKIFITISGRKETRRLFLGILRDVFQKIHKSLPNLEITEWVPVPNHPNHPPLDYQELLGLEAMSESTITIGKLKLKLDLRQLLDGYESLESRQKIQKGDPESDRFTIVNKIYNNNHQGEYKPMTENTNNLQGANIANFANEVKDNARQQASNFNQTSGANISEILQLIGNLRQTAAQFPPAIRDDITIEIDDVEEEIKKPEKKRNLPKLKKRLLAILTAATVVAAPIAGMTDFANNVMEIGSKLNIELPLP
>CP026692.1|AVH71004.1|2712267_2712681_-|SnoaL-like-domain-protein
MHKSYKFIKAIENKTMERQTPTQIQQDLLIKAYAAFNARHIDSVIALMHSDVEWANGMEGGYVRGHAAVRDYWTRQWSLIDPHVEPQGFQLDESGRIVVHVHQVVQDLDGKLIHEQMVQHIYTIENGLIRQMDIQAL
>CP026692.1|AVH71005.1|2712823_2713801_+|Rieske-(2Fe-2S)-domain-containing-protein
MVQDQILLNDWHVIARSQDLQPGTVLQKRLLGSNIVLWHNGDKVLAWQDVCPHRGARLSLGYVNKETLVCPYHGLAFNSEGKCVLVPANPEQSPPTQACVKTYQVQERYDLLWVCLGTPKQDIAPFSEWYDPVYQKIFCGPYYYHSSPLRVLENFIDPAHFPIMHSGLFAHASRPELTHYELEPLPDGISFKCGLWELDFNSGNPLSAPLIFNTYDYRIFRPLVAYFKLGPGDHRLNIFYTITPVDEDECVVQYWLMVNSVREVKVEVYLDIQNQVASQDIAIVESQQPRRLPLDLQAEVHLPSDRYSIAYRKWLKQQGVTFGTI
>CP026692.1|AVH71006.1|2713994_2714750_-|TspO/MBR-related-protein
MNQSNNSGIVEQFVNTVMGVKPGNKQQYLNTSIATTQELDIRAGLVYILGTTLQILVMIIVLLGMEKLVFFIDNNSDFASWFSTLLTGLFFALLSIRSRIFSLLDNTRSRQTYDQVIRPRWSPPPLVFPIVWMIIAVLRVISSVLVWQQMNHHFLVLPLILFVVHLALGDTWNTIFTVERRLGAAVPVVILGPWLSAVVVTAIYWQTNPIAGMTLSFSCVWLTVAVVLVFRIWQLNGSEPLYPLKLTPVDK
>CP026692.1|AVH71007.1|2714906_2715524_+|hypothetical-protein
MEFQKLLYIFTLVNIATFALSVPVFAQITQTPFNSSQSNCRATKVNTPIFKEPSTSSNAIRILSAKTRITLAYIPVSGDRFVRIKSPTSGFIQTAVLKFCQTNNNAQNIWNKPTIGSVCRQIVRQETIRRQPSTKEPFITTLYPNTIVFVNLVTGKIVKSYKSENYIWVEIDLSRSFPGELSGNGWMVNTDLVNTPGLSSLAYCS
>CP026692.1|AVH71008.1|2716113_2717205_+|protein-of-unknown-function-DUF4350
MKRPNRLAWMGAIALAAIVLLSLFAAPNNTKINAGSTYNRNSDGYGAWYAFMQQQGISIKRWQKPFSDIQPENSPVTLLQIGGYPRETTLDSQEREWVEKGNTLVILGAKARVTEAEFSTMQKSPEGNIKIDTRRRYKKANSQQVNLGDRFGAVVWKENYKKGKVIFSTTPYLAANAYQDYLSNFKYLASLVIEKSNTIFVDEYIHGYKDADVRKKESEGDLSSFIAKTPLFPILIQVGILLLVLVWAQNRRFGKPVALDTPVVDNSEAYIQALAGVLQKADTTDFVVEMVGKQEQLQLQKALGLGQVLLERQALIDFWIEKTGASAAELDAVLKLQSRKQPISERDLLSWLGKWRTIREIKN
>CP026692.1|AVH71009.1|2717265_2718216_+|magnesium-chelatase/MoxR-like-ATPase
MSETHPILIRLGQGLNQVIVGQSSLIQQVLVALLAGGHVILEGVPGTGKTLLVKVLAQLIKGEFRRIQLTPDVLPSDITGTNIFDLNSRNFTLKKGPIFTEVLLADEINRTPPKTQAALLEAMEEMQVTLDGESLPLPDLFWVIATQNPLEFEGTYPLPEAQLDRFLFKLVVDYPDRSAEKQMLLNRQAGFAARRLDISRLKPIATVADILQARQAVKEVKVSEAIVDYLLALVTISRQYPDLTLGASPRATGAWLQTSQALAWLAGRDFVTPDDVKAVASPLLRHRLILKPEAMLDGLQMDAVIASVINQVPVPR

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Crispr_ID: CP026692_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_17

2892131-2892741

Unclear

Consensus_repeat	Method
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAA	CRISPRCasFinder
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	CRT
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	PILER-CR

8 spacers

cas1,cas2

The CRISPR arrays of CP026692_17

>merge|CP026692|17|2892131-2892741|CRISPRCasFinder,CRT,PILER-CR
TTTATAACTAATTCATTTTCCGAAGAAGTTTAAAGGAAAATAGACTTTGGCAGAATGCCACATCCAATAGTAAGTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAGCAATTGTTCTCAACAAGAATAATTGTTTAGCAACTCGGTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAGCCCTTGTTTTCGGACACAGAGGTACAGGTAGAAAAGGTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAGAGAAATTAACTCCAAGGAATCAGACATGTCCAACATTGTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAGAGCAGATGACCATAGATTTTGTGTCCCGCATTCTGAAGTTTCCATTAATTCAACTTCCGAAGAAGTTTAAATATCTGGTTTTATACATTCTGGAAGGAAGTTATCAAATGTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAGCCTCAAAAAGTACCGCTGGTTTAGGCTTCAGTACTGGTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAGTTTTGAAACCTTAAAAAAAATGCTAAACGCTGATCCTAGTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG

>CP026692|17|16|2892131-2892740|CRISPRCasFinder
TTTATAACTAATTCATTTTCCGAAGAAGTTTAAA	GGAAAATAGACTTTGGCAGAATGCCACATCCAATAGTAA
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAA	GCAATTGTTCTCAACAAGAATAATTGTTTAGCAACTCG
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAA	GCCCTTGTTTTCGGACACAGAGGTACAGGTAGAAAAG
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAA	GAGAAATTAACTCCAAGGAATCAGACATGTCCAACATT
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAA	GAGCAGATGACCATAGATTTTGTGTCCCGCATTCTGAA
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAA	TATCTGGTTTTATACATTCTGGAAGGAAGTTATCAAAT
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAA	GCCTCAAAAAGTACCGCTGGTTTAGGCTTCAGTACTG
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAA	GTTTTGAAACCTTAAAAAAAATGCTAAACGCTGATCCTA
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAA

>CP026692|17|6|2892131-2892741|CRT
TTTATAACTAATTCATTTTCCGAAGAAGTTTAAAG	GAAAATAGACTTTGGCAGAATGCCACATCCAATAGTAA
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	CAATTGTTCTCAACAAGAATAATTGTTTAGCAACTCG
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	CCCTTGTTTTCGGACACAGAGGTACAGGTAGAAAAG
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	AGAAATTAACTCCAAGGAATCAGACATGTCCAACATT
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	AGCAGATGACCATAGATTTTGTGTCCCGCATTCTGAA
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAT	ATCTGGTTTTATACATTCTGGAAGGAAGTTATCAAAT
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	CCTCAAAAAGTACCGCTGGTTTAGGCTTCAGTACTG
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	TTTTGAAACCTTAAAAAAAATGCTAAACGCTGATCCTA
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG

>CP026692|17|5|2892204-2892741|PILER-CR
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	CAATTGTTCTCAACAAGAATAATTGTTTAGCAACTCG
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	CCCTTGTTTTCGGACACAGAGGTACAGGTAGAAAAG
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	AGAAATTAACTCCAAGGAATCAGACATGTCCAACATT
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	AGCAGATGACCATAGATTTTGTGTCCCGCATTCTGAA
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAT	ATCTGGTTTTATACATTCTGGAAGGAAGTTATCAAAT
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	CCTCAAAAAGTACCGCTGGTTTAGGCTTCAGTACTG
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG	TTTTGAAACCTTAAAAAAAATGCTAAACGCTGATCCTA
GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH71133.1\|2890148_2890418_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71132.1\|2889604_2889904_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71142.1\|2901299_2901635_-\|XisI-protein	unknown	unknown	gnl\|CDD\|341357
CP026692.1\|AVH71130.1\|2886291_2886582_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71145.1\|2904818_2905934_-\|transposase	unknown	unknown	gnl\|CDD\|376573
CP026692.1\|AVH71138.1\|2897834_2898950_+\|transposase	unknown	unknown	gnl\|CDD\|376573
CP026692.1\|AVH71141.1\|2900278_2901313_-\|Integrase/site-specific-recombinase-XerD	unknown	unknown	gnl\|CDD\|274043
CP026692.1\|AVH71144.1\|2902927_2903221_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71129.1\|2885326_2886289_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|212669
CP026692.1\|AVH71136.1\|2892952_2894959_-\|CRISPR-associated-RNA-directed-DNA-polymerase/endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
CP026692.1\|AVH71135.1\|2890823_2891867_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
CP026692.1\|AVH71134.1\|2890542_2890821_-\|CRISPR-associated-protein-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP026692.1\|AVH71139.1\|2899124_2899805_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71143.1\|2901622_2902039_-\|XisH-protein	unknown	unknown	gnl\|CDD\|370136
CP026692.1\|AVH71128.1\|2883976_2884762_-\|cobyrinic-acid-ac-diamide-synthase	unknown	unknown	gnl\|CDD\|224113
CP026692.1\|AVH71126.1\|2882793_2883162_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71131.1\|2889284_2889467_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71140.1\|2899807_2900275_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71137.1\|2895188_2895947_+\|protein-of-unknown-function-DUF4384	unknown	unknown	gnl\|CDD\|379557
CP026692.1\|AVH71127.1\|2883525_2883984_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH71134.1\|2890542_2890821_-\|CRISPR-associated-protein-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.00916e-29
CP026692.1\|AVH71143.1\|2901622_2902039_-\|XisH-protein	gnl\|CDD\|370136	pfam08814, XisH, XisH protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	1.35936e-79
CP026692.1\|AVH71128.1\|2883976_2884762_-\|cobyrinic-acid-ac-diamide-synthase	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	6.4637e-37
CP026692.1\|AVH71145.1\|2904818_2905934_-\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	7.10853e-08
CP026692.1\|AVH71138.1\|2897834_2898950_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	2.97436e-07
CP026692.1\|AVH71142.1\|2901299_2901635_-\|XisI-protein	gnl\|CDD\|341357	cd16382, XisI-like, XisI is FdxN element excision controlling factor protein. This family contains XisI proteins, also known as FdxN element excision controlling factors, and similar proteins. FdxN element is excised from the chromosome during heterocyst differentiation in cyanobacteria. This is accomplished by the large serine recombinase XisF (fdxN element site-specific recombinase). The xisH as well as the xisF and xisI genes are required. XisI may function as recombination directionality factor (RDF), and needs XisH which may function as an endonuclease.	2.2102e-63
CP026692.1\|AVH71141.1\|2900278_2901313_-\|Integrase/site-specific-recombinase-XerD	gnl\|CDD\|274043	TIGR02225, Tyrosine_recombinase_XerD, tyrosine recombinase XerD. The phage integrase family describes a number of recombinases with tyrosine active sites that transiently bind covalently to DNA. Many are associated with mobile DNA elements, including phage, transposons, and phase variation loci. This model represents XerD, one of two closely related chromosomal proteins along with XerC (TIGR02224). XerC and XerD are site-specific recombinases which help resolve chromosome dimers to monomers for cell division after DNA replication. In species with a large chromosome and with homologs of XerD on other replicons, the chomosomal copy was preferred for building this model. This model does not detect all XerD, as some apparent XerD examples score below the trusted and noise cutoff scores. XerC and XerD interact with cell division protein FtsK. [DNA metabolism, DNA replication, recombination, and repair].	8.66496e-34
CP026692.1\|AVH71129.1\|2885326_2886289_+\|hypothetical-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	3.36588e-33
CP026692.1\|AVH71136.1\|2892952_2894959_-\|CRISPR-associated-RNA-directed-DNA-polymerase/endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.35833e-112
CP026692.1\|AVH71137.1\|2895188_2895947_+\|protein-of-unknown-function-DUF4384	gnl\|CDD\|379557	pfam14326, DUF4384, Domain of unknown function (DUF4384). This presumed domain is functionally uncharacterized. This domain family is found in bacteria and archaea, and is approximately 80 amino acids in length.	4.20469e-17
CP026692.1\|AVH71135.1\|2890823_2891867_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.14669e-64

>CP026692.1|AVH71135.1|2890823_2891867_-|CRISPR-associated-endonuclease-Cas1
MSTIYITEQDATLQVQHHYLKVFHQQKQCISLRINNVSQIILFGNIRLSKEVLQVVVAHQIPVLYLTANGKFIGRLENTAQRQYKYLTSQRQRARNAEFNHATAESIIWAKLHNQHTFVQSWTRHYADYTTKRALNYLTLLMDNLPLATSPNELREYSEEADKVYYSAVTSLLNFHNSCSQFNQKRINGFLNLGYQLLHQYIYTLLDTTGLHPDYAILHRDLDRELPLAWDFTAEFRAAIVDDLVLNFARNFPHTNGNGNGNGKSHPRSILQHFLQHWEGKLRTFILHPYAGEISYRQCMDLQVREYLACLLGNVDYYRPLALKFHPADSNLANITELQKTPLTLVR
>CP026692.1|AVH71134.1|2890542_2890821_-|CRISPR-associated-protein-Cas2
MFYLVCYDIVSDRRRNKVAKLLEAYGLRVQKSVFECVLDENQYTTLSKYLVRLVNKREDQVRFYPMSAHTRCKIAVLGTQPQLVIDDAAYIV
>CP026692.1|AVH71133.1|2890148_2890418_-|hypothetical-protein
MQIPAIKFRLVFTSKVQKKLETLPSSDRKQYKKAFECFAQYGPTYRSLRTHRYRCKDSDIWSSSASMTKRFYWRYMEKISIEVTHIDSH
>CP026692.1|AVH71132.1|2889604_2889904_-|hypothetical-protein
MPNPRPLQMRDLRLISMYSNWEFGMTPQQFYSKWAVSYEQIALICSRSDSTVRGWFRNGRNRRYPTRNDLLHLGLMDFLLEHYEEIPEHIQGLLRFAAS
>CP026692.1|AVH71131.1|2889284_2889467_-|hypothetical-protein
MTYFEQLHPWCIIRKLSSKDSKVIARFRRHNDATAYLQVLQKQMANVKLVVKFNSPTEIA
>CP026692.1|AVH71130.1|2886291_2886582_+|hypothetical-protein
MADKQDLTPEKVRIKDSYRERIFAESQQLGKSYLETLYFIIDCYFAFRKGTFPTQQVAFTPINTESNQLVQPTKELSTDSKPEDSDDQTFSLDFDL
>CP026692.1|AVH71129.1|2885326_2886289_+|hypothetical-protein
MSNIHTLQKIFPAGFDNGYGSLKLLVDGFEVVRVPSYITNAEMEDVPGRVVFNGTAYTVGESAFRTGYHFDRNTDNNENKVNNALLTLLGALAHLPHRKAWHLKLVVSLHDVGLADELQKVLSGEYQPILAGKQSEVKVEVLKIVLEGMGALFGHQLPKKLTILDFGNGTTLYSRYNQGKREVHTAYPIGVEVLIDDISQKMKHLNGGKIGDASKIRFCLEMGHTKYSRDIDIKDIYSACLKDWYEKYLKKVLNLTLDAKHQGDEIWAIGGGCLLPGFKKLLEKNGFKILDNPVEANVFGLLEMAKTIMSKNPTTTSGKL
>CP026692.1|AVH71128.1|2883976_2884762_-|cobyrinic-acid-ac-diamide-synthase
MLLVVSKMLILTCASLSGGQGKTTVAILLGRMLAQTGQRVLMIDADPQANLTFYLGHEVQQNQPTLLEVLKKQINTEDGIYEIGENLWLIPADDGLDNAQEFLSGSGMGAIVLSKRLKEVSDLFQYCIVDAPPQRSQICLTSLGAADHIIIPVEASSKGVNSLIRTLSLVEELQEIDAFSGIVLGILPFRDKWVGNNQVAQSKASISAMRTIAEEIVVLPSILESEQFKKAIDKGVSLSSLGFEQLETPFQQIIERLQKNV
>CP026692.1|AVH71127.1|2883525_2883984_-|hypothetical-protein
MSDVFERLKKKTRPSVPARDTTLVKVQHDNLLNDEITEFSHLPEKPKPDLDSEEVINDKVSTSNQEEQLELPQIIRRTIRLEQDIDTKLDTFCNVNKITRDTFLEGAFIVCSENEELLQQVLNQARKRYQQRKQAGEQRKFQTLAKKINVND
>CP026692.1|AVH71126.1|2882793_2883162_+|hypothetical-protein
MQSFVSEKTQSYQQLFDEMMNRFNLEAKKTAEQAKVSEVMLSRFRRGKADLGASKLISLLLAIPVEARVWYLSELFGQRPGISLRSLIAEAPPEEQAEVLRLIADIFVNNSREATDPVQFLT
>CP026692.1|AVH71136.1|2892952_2894959_-|CRISPR-associated-RNA-directed-DNA-polymerase/endonuclease-Cas1
MFTLEQLHFAWSQVRAGSRSAGVDGITVDLFAASADEQLQILLRQLQLESYRVSPAQGFYLTKKSGGKRLIGIPTVRDRIIQRLLLEELYFPLEDTFLDCSYAYRPGRNIQQAVQQLFSYYQYRPAWIIKTDIAQFFDSLSWALLVTNLEALHLETTVLQLIEQHIKAGIVIAGKYINYGQGVLQGGILSGALANLYLTDFDRKCLSYNINLVRYGDDFAIACNSWSEANRIFDQITTWLGKLYLKLQPEKTQIFAPHEEFTFLGYRFANGKVYAPPPPEPRREGEWLTNASGTPYFRPKERPLKFVSRPPKACDISKPTNLPRAPISHLWQEFMTTLYVTDQGAYLSVKNQQFHVYYQRELRIKVPIVRVTSIVLFGCCNLSHGAVSLALRQRIPVMYLSQKGRYFGRLETEGMAKVEYLARQVECCKNSEFTKKQASAIVQAKLHNSRIMLMRLNRRVKSDKATQAIAQLELFMDKLPFAKDVNMLRGYEGIAATTYFQALGSLMTGEFAFEKRTKRPPTDPINSMLSLGYTLLSQNVHSLIQAVGLHTHFGNLHVPRDNHPALVSDLVEEFRALVVDSLVVYLANRNLFTIDDFTYPDERNGVYFQPHALKKFLKHWEERLQTEVTHPHTDQKLPYRRCIELQVREYIACLMGEVEVYRPMIWDK
>CP026692.1|AVH71137.1|2895188_2895947_+|protein-of-unknown-function-DUF4384
MPKRSLVASEKGVERAKYALIRKNWTQQTLADDVGVASWATISKFFNRIPISYNIFVEVCQILDLDWQDIIAPFSPVEEPQQVLLTPLNQLWQQLQSLGSPIEEMGLVLVQTETLGWKWQANSRYEKSVRIGSYIQFEVNLESPGYLLLIQKDTSEQVWCFCPSRFAPQPQLDTGKTSLPQQGSPITSFPIEGVPGKEYILAVVTIEAPSLDWLPQGNDEPLELTEDDLIQLLEFVNASENCRVLYTEYEVK
>CP026692.1|AVH71138.1|2897834_2898950_+|transposase
METILAHAHTLMYTILALMPSRYQRDNLEAMLGLFLAADGKPLPHYSKSKSESALSRFLNTYKWPTRKLIRHLRQQAIEQVNSHCPLGRKAFLQVIIDLTTLEKCGQFKAFKNLITVYNGKRGLHIVVLYLVVGQWRIPWNFRVWRGKGTASPSQIALRMVRHLPKDLTKRFRVKILADTAFGTKDFINNLRKLKYHAVIGIGCNRKLVNGYPVKLLHRRGQQVRLVGLDFPVTLSXYYFKRDNGQFVKRYVISTQPLKASTISWWGKRRWKIEGWFKTAKYRFGLDRFGQGTLLGIYRWLVLSITAYLLAYWTYLSSCFPDSLDWGQAAFLALSTFLPHLVLSLLLLDIERLRPLALSHGIDITISRCKI
>CP026692.1|AVH71139.1|2899124_2899805_-|hypothetical-protein
MTTYRQLTIWDVLDELSESPATSTLAPMWECLDAELEKLPLEAQLSTAGIAFSQIADILKSRAEVLLQDTRDRNSLLGPVVSTDLFAGLVRTTMHLDLDDLIEPQTPQTFKPHGPHQFSSPTELGDSVVAPVEKANVLAMLDEVTTLEDVRNLASDEDVQKWQSAIAKYLTQVKGEISLTQLQGGLKMPMVEVWLGLLLGGFTLEQHGDFYHNQNVWVKSSPSYYQ
>CP026692.1|AVH71140.1|2899807_2900275_-|hypothetical-protein
MPKPLDPKCQLCAKLPTAQAKVLHGTAGDGCWNPKVCHNRRSFYRHRSQNNSAEIDAIAVEPPTTYFAVLYLYKEAGDKPLHALGAELWLGQKPICRLEPIHCFGLTAGKIRAYTDQVLQSFAKQYGVSLYQYKDMFEIASSYCPVRPCPLHPES
>CP026692.1|AVH71141.1|2900278_2901313_-|Integrase/site-specific-recombinase-XerD
MQLVKPMNYNTDSLPAIKLISLDGENPLNIQGIRSTKTSAPTDIRWVKVLEFLRSNNLALNSRKLYERELKRFLAWSELHYHELRPRHLALYKEYLRDEIRTDAGKPLSKSSINASIAALKSFFKWMCYTYPDIISTNPTLGIKLEKVPLPPAQSLTPEQMERVWSALELLGETKQRDTALLHILSHGLRAGEVVQLNVGSFDGKLLFLPDTKTNEPRLVPLRKESREVLAEYLLTREERSEVLNSDSPLMISHHASYKGERLSYHGIYFAVEKIGEIAHIEDLHPHSFRHTYATDLLLLGVDPSHARKLTGHQSEKAFRRYTLRSEQEAAIAAYYRAIGEEAE
>CP026692.1|AVH71142.1|2901299_2901635_-|XisI-protein
MDKLTQYRQIVQQLLREYAEIGSPDPDVETQIVFDTERDHYQLMNVGWKNQRRVYGCFLHIDIKDGKVWLQHNGTEYEVAEQLANLGIPKQDIVIGFHSAFKRQFTDYAVS
>CP026692.1|AVH71143.1|2901622_2902039_-|XisH-protein
MPARDVFHNAVKHGLIANGWKITHDPLPVSFELGDMYIDLGAEKLLAAQRGEEKIAVEIKSFVRTSAIYEFHTALGQFINYRLALFEQEPERTLYLAVPIDAYSSFFTIRLVQNIIRIHQLKLIVYNPETEEIVEWIN
>CP026692.1|AVH71144.1|2902927_2903221_-|hypothetical-protein
MKTSNDTDIKKIIKKSDKLTLRQMKLIEEAEDQLLEANTVNSPAPVVEVEEKPVAISEPRVPDYIPLLDNPPVQSVGNSGWQVSDVWRDIRVDDFCN
>CP026692.1|AVH71145.1|2904818_2905934_-|transposase
METILAHAHTLMYTILALMPSRYQRGNLEAMLGLFLAADGKPLPHYSKSKSESALSRFLNTYKWPTRKLIRHLRQQAIEQVNSHCPLGRKAFLQVIIDLTTLEKCGQFKAFKNLITVYNGKRGLHIVVLYLVVGQWRIPWNFRVWRGKGTASPSQIALRMVRHLPKDLTKRFRVKILADTAFGTKDFINNLRKLKYHAVIGIGCNRKLVNGYPVKLLHRRGQQVRLVGLDFPVTLSWYYFKRDNGQFVKRYVISTQPLKASTISWWGKRRWKIEGWFKTAKYRFGLDRFGQGTLLGIYRWLVLSITAYLLAYWTYLSSCFPDSLDWGQAAFLALSTFLPHLVLSLLLLDIERLRPLALSHGIDITISRCKI

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Crispr_ID: CP026692_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_18

3725986-3726107

Orphan

Consensus_repeat	Method
CGGCTTGTCGTTAGACATCGCCTGTTGTAGAAGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026692_18

>merge|CP026692|18|3725986-3726107|CRISPRCasFinder
CGGCTTGTCGTTAGACATCGCCTGTTGTAGAAGAGTGAGTGCGATCGCCTTACAGAAAACCTCGAAAACAAGGCTTAGACGCTTCTTCGGCTTGTCGTTAGACATCGCCTGTTGTGGAAGAG

>CP026692|18|17|3725986-3726107|CRISPRCasFinder
CGGCTTGTCGTTAGACATCGCCTGTTGTAGAAGAG	TGAGTGCGATCGCCTTACAGAAAACCTCGAAAACAAGGCTTAGACGCTTCTT
CGGCTTGTCGTTAGACATCGCCTGTTGTGGAAGAG

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH71759.1\|3721860_3723267_+\|Iron-regulated-ABC-transporter-permease-protein-SufD	unknown	unknown	gnl\|CDD\|273908
CP026692.1\|AVH71755.1\|3718255_3718516_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71765.1\|3733243_3734386_-\|ADP-heptose:LPS-heptosyltransferase	unknown	unknown	gnl\|CDD\|223928
CP026692.1\|AVH71768.1\|3736983_3738240_-\|group-1-glycosyltransferase	unknown	unknown	gnl\|CDD\|340851
CP026692.1\|AVH71770.1\|3739353_3744303_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
CP026692.1\|AVH71760.1\|3723505_3724768_+\|cysteine-desulfurase-SufS	unknown	unknown	gnl\|CDD\|215460
CP026692.1\|AVH71764.1\|3728564_3732551_-\|magnesium-chelatase-subunit-H	unknown	unknown	gnl\|CDD\|237117
CP026692.1\|AVH71767.1\|3735942_3736851_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71752.1\|3715283_3715964_-\|TPR-repeat-containing-protein	unknown	unknown	gnl\|CDD\|276809
CP026692.1\|AVH71769.1\|3738338_3739076_-\|type-11-methyltransferase	unknown	unknown	gnl\|CDD\|379312
CP026692.1\|AVH71753.1\|3716613_3716940_+\|UPF0145-family-protein-YbjQ	unknown	unknown	gnl\|CDD\|223470
CP026692.1\|AVH71763.1\|3727108_3728545_-\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|238192
CP026692.1\|AVH71761.1\|3725607_3725832_-\|putative-addiction-module-protein	unknown	unknown	gnl\|CDD\|131625
CP026692.1\|AVH71762.1\|3726251_3727091_-\|type-II-restriction-endonuclease-TdeIII	unknown	unknown	gnl\|CDD\|370545
CP026692.1\|AVH71757.1\|3719502_3720942_+\|cysteine-desulfurase-activator-complex-subunit-SufB	unknown	unknown	gnl\|CDD\|236990
CP026692.1\|AVH71771.1\|3744299_3746228_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|341253
CP026692.1\|AVH71754.1\|3717277_3717916_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71756.1\|3718574_3719258_-\|iron-sulfur-cluster-biosynthesis-transcriptional-regulator-SufR	unknown	unknown	gnl\|CDD\|131749
CP026692.1\|AVH71758.1\|3721069_3721861_+\|iron-regulated-ABC-transporter-ATPase-subunit-SufC	unknown	unknown	gnl\|CDD\|214372
CP026692.1\|AVH71766.1\|3734573_3735536_-\|glycosyl-transferase-family-protein	unknown	unknown	gnl\|CDD\|223928

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH71759.1\|3721860_3723267_+\|Iron-regulated-ABC-transporter-permease-protein-SufD	gnl\|CDD\|273908	TIGR01981, UPF0051_protein_Rv1462/MT1509, FeS assembly protein SufD. This protein, SufD, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. SufB and SufD are homologous. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	9.34156e-107
CP026692.1\|AVH71764.1\|3728564_3732551_-\|magnesium-chelatase-subunit-H	gnl\|CDD\|237117	PRK12493, PRK12493, magnesium chelatase subunit H; Provisional.	0
CP026692.1\|AVH71765.1\|3733243_3734386_-\|ADP-heptose:LPS-heptosyltransferase	gnl\|CDD\|223928	COG0859, RfaF, ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane].	6.18809e-29
CP026692.1\|AVH71768.1\|3736983_3738240_-\|group-1-glycosyltransferase	gnl\|CDD\|340851	cd03825, GT4_WcaC-like, putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Escherichia coli WcaC has been predicted to function in colanic acid biosynthesis. WcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.	1.04407e-119
CP026692.1\|AVH71770.1\|3739353_3744303_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
CP026692.1\|AVH71760.1\|3723505_3724768_+\|cysteine-desulfurase-SufS	gnl\|CDD\|215460	PLN02855, PLN02855, Bifunctional selenocysteine lyase/cysteine desulfurase.	0
CP026692.1\|AVH71752.1\|3715283_3715964_-\|TPR-repeat-containing-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	5.0089e-17
CP026692.1\|AVH71769.1\|3738338_3739076_-\|type-11-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	9.84721e-21
CP026692.1\|AVH71753.1\|3716613_3716940_+\|UPF0145-family-protein-YbjQ	gnl\|CDD\|223470	COG0393, COG0393, Uncharacterized conserved protein [Function unknown].	2.86213e-37
CP026692.1\|AVH71762.1\|3726251_3727091_-\|type-II-restriction-endonuclease-TdeIII	gnl\|CDD\|370545	pfam09520, RE_TdeIII, Type II restriction endonuclease, TdeIII. This family includes many TdeIII restriction endonucleases that recognize and cleave at GGNCC sites. TdeIII cleave unmethylated double-stranded DNA.	4.33136e-65
CP026692.1\|AVH71761.1\|3725607_3725832_-\|putative-addiction-module-protein	gnl\|CDD\|131625	TIGR02574, hypothetical_protein, putative addiction module component, TIGR02574 family. Members of this family are bacterial proteins, typically are about 75 amino acids long, always found as part of a pair (at least) of two small genes. The other in the pair always belongs to a subfamily of the larger family pfam05016 (although not necessarily scoring above the designated cutoff), which contains plasmid stabilization proteins. It is likely that this protein and its pfam05016 member partner comprise some form of addiction module, although these gene pairs usually are found on the bacterial main chromosome. [Mobile and extrachromosomal element functions, Other].	1.50137e-14
CP026692.1\|AVH71763.1\|3727108_3728545_-\|DNA-cytosine-methyltransferase	gnl\|CDD\|238192	cd00315, Cyt_C5_DNA_methylase, Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the mammalian genome. These effects include transcriptional repression via inhibition of transcription factor binding or the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability.	2.87689e-66
CP026692.1\|AVH71757.1\|3719502_3720942_+\|cysteine-desulfurase-activator-complex-subunit-SufB	gnl\|CDD\|236990	PRK11814, PRK11814, cysteine desulfurase activator complex subunit SufB; Provisional.	0
CP026692.1\|AVH71771.1\|3744299_3746228_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|341253	cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS). The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.	1.36546e-123
CP026692.1\|AVH71756.1\|3718574_3719258_-\|iron-sulfur-cluster-biosynthesis-transcriptional-regulator-SufR	gnl\|CDD\|131749	TIGR02702, transcriptional_regulator, iron-sulfur cluster biosynthesis transcriptional regulator SufR. All members of this cyanobacterial protein family are the transcriptional regulator SufR and regulate the SUF system, which makes possible iron-sulfur cluster biosynthesis despite exposure to oxygen. In all cases, the sufR gene is encoded near SUF system genes but in the opposite direction. This DNA-binding protein belongs to the the DeoR family of helix-loop-helix proteins. All members also have a probable metal-binding motif C-X(12)-C-X(13)-C-X(14)-C near the C-terminus. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Regulatory functions, DNA interactions].	8.89751e-113
CP026692.1\|AVH71758.1\|3721069_3721861_+\|iron-regulated-ABC-transporter-ATPase-subunit-SufC	gnl\|CDD\|214372	CHL00131, ycf16, sulfate ABC transporter protein; Validated.	9.8497e-156
CP026692.1\|AVH71766.1\|3734573_3735536_-\|glycosyl-transferase-family-protein	gnl\|CDD\|223928	COG0859, RfaF, ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane].	1.52063e-18

>CP026692.1|AVH71761.1|3725607_3725832_-|putative-addiction-module-protein
MDITATLNEIATLSVEDRIRIVQAIWDTIAAEQVYPDLTDAQKQELDRRTSDYNSNPNNVLTWEEIKASIKRQQ
>CP026692.1|AVH71760.1|3723505_3724768_+|cysteine-desulfurase-SufS
MTFTPTKTVADQVRADFPILHQEVNEKPLVYLDNAATSQKPLFVLNTLRDYYEQYNANVHRGAHSLSAKATDAYEGARDKVAKFINAASRQEIVYTRNASEAINLVAYSWGMNNLQPGDEIILSVMEHHSNIVPWQLVAQKTGAVLKFVELTPEETFDLSQFKKLISEKTKLVSVVHISNTLGCINPVEEIGAIAHKYGAKFLVDACQSVPHYPVDVQKIDCDWLVASGHKMCAPTGIGFLYGKLELLESMPPFFGGGEMIAEVYLDHSTYAELPHKFEAGTPAIGEAIALGAAIDYLSNIGMDKIHAYEAELTAYLFQELEQIPQIRIYGPKPNAKGEGRAALASFTTGEVHANDLSTLLDQEGVAIRSGHHCTQPLHRYLGLAATARASLSFYNTREEIDVFIKALKETLDFFAGFLA
>CP026692.1|AVH71759.1|3721860_3723267_+|Iron-regulated-ABC-transporter-permease-protein-SufD
MSIQVSQNQASNTLVNGDPYLSELLNQFQGLIFEEVPQPETFAWLQQVRDRAANFVRHSTIPTTREEEWRFTDLSSLRQVKFNVETRGFWSIKFDITQLTLPEAVDSRLVFVNGVFAPDLSSVADLPEGIWVEDLAEFPLEYRDRLQNYLAQQEGTQEVFTALNTAAFTNASVVWVGKNVVVETPIHLLFLSIPGNSPILSQPRSLVVAESGSSVTLIEDYLYQPTNIEDPDQIQLGEVVHFTNAVTEIWVEENAQVNHTRIQRESAEAFHIGKTSVSQARDSRYTCNAINLGAKLSRHNLEILQTGEQTETTLNGLTMISSKQLSDTHSAIALNHPHGTTDQLHKCIVGDRAHAVFNGKVFVPKLAQLTNAAQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLEDDEIFYLQSRGIDENDARKLLVNAFAAEVINKIPIPSLREILLNIVNNLKSISPDS
>CP026692.1|AVH71758.1|3721069_3721861_+|iron-regulated-ABC-transporter-ATPase-subunit-SufC
MIIENSEIVLSVRDLTANVDGTPILKGVNLEVRSGEIHAIMGPNGSGKSTFSKVLAGHPAYEVTGGEVIFQGQNLLELEPEERARSGVFLAFQYPLEIPGVSNLDFLRVAYNSRRKAQGLEEIDAFDFDDLIEEKLDVVKMNPSFLSRSLNEGFSGGEKKRNEILQMALLEPKLGILDETDSGLDIDALRIVANGVNQLASPKNATILITHYQRLLDYIVPDFVHVMAQGQIITSGGKELALKLESGGYDWVLAEFAAAEVGV
>CP026692.1|AVH71757.1|3719502_3720942_+|cysteine-desulfurase-activator-complex-subunit-SufB
MSATVKTLVNQPYKYGFVTDIEADTIPRGLDEDVVRLISSKKNEPQFMLDFRLRAYRQWQKMTEPTWPNVKYPPINYQDIIYYSAPKRKKEKLNSLDEVDPTLLETFEKLGISLSEQKRLANVAVDAIFDSVSVATTFKEKLAEDGVIFCSFSEALQEHPELIKKYLGSVVPIADNYFAALNAAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEEGSYVSYLEGCTAPMYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDANGKGGIYNFVTKRGLCQGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNHMQQADTGSKMIHVGKNTRSTIISKGISAGKSSNSYRGLVKVNPTAKGARNYSQCDSMLIGDNAHANTFPYIQVQNNTGKVEHEASTSKIGEDQLFYFAQRGISSEDAISMMISGFCKDVFNQLPMEFAVEADKLLSLKLEGSVG
>CP026692.1|AVH71756.1|3718574_3719258_-|iron-sulfur-cluster-biosynthesis-transcriptional-regulator-SufR
MATTHQSSTKQDILEYLHKHEKATALELAEVLDVTPQAIRRHLKDLETEELVLYSTSVQAAGMGRPQHLYQLSHQGRDRLHRTMSDRFGDGHGHFAVSLLDTLAETVGHDQFKWILQKQWERKALEYRDRVGSGSLRERVANLVELRKAEGFMAEYHPVDVNDCFESDRFILMEHNCAISNVAESFPSICGHELEMFAAVLPDCNVERTHWIINGEHRCGYLVQIRH
>CP026692.1|AVH71755.1|3718255_3718516_-|hypothetical-protein
MDVLPQQPSAQFLTLEESAKVDAALLSSPEKFLTRLTISSLKLLKHIAQEYGVTIEDLTAQQLISWFEKDGKIRREQGIEASYLKW
>CP026692.1|AVH71754.1|3717277_3717916_+|hypothetical-protein
MSYVNRTGNDVISTDTVVAGRVAEYHDRVRWGPIIAGLLVSLATQLILSSIIAAVAAGTVAGSGAPRTIAPNAAGNAGLWSTIALLISLFTGGWVTARACGPMNRNTALLNGAILWATTLAVSSWLLASGVSGAFGVAASNAGEVINQVQQQGGVNVPQANISAQQARETAANIRSGLWWFVFGSLLGLIASMIGAVTGARSPRTNTNTYNA
>CP026692.1|AVH71753.1|3716613_3716940_+|UPF0145-family-protein-YbjQ
MIITTTDVIQGAVIESYLGVVTAEVVYGSNFLRDFLAGIRDIIGGRTASYERLFEQGQRKALEELEQRAQRLGANAVIGIEIDTGTINLDQSGVLLLITATGTAVRMR
>CP026692.1|AVH71752.1|3715283_3715964_-|TPR-repeat-containing-protein
MYKPTSFVFSVVLLGCFTFTIPSVAQAQVLVAQGKNPELKQLLEEGRRLVNAGDYGGAIAVYQQAASIDPKNAKIHSGIGYLYAQQGNYQAALTAYRRAIAINPNNSDFYYAVGYIKANLGDTRGAKEGYRRAIQLNRNNVNAYLGLAVTQSRMGDYNAATWAYQQAIDLDKNNAQTYELMGSMYKQRRQTKQANSLLQKARDLYKRRNDSDGVERVEAMLRQLGG
>CP026692.1|AVH71762.1|3726251_3727091_-|type-II-restriction-endonuclease-TdeIII
MVAISSNTRAVIKGYLEGFIKALVDEYKGRKILKPDNAAEYLSRFSYNGELKPFQAALIPPELIRINQFERGLSTKLGNSFEECARLIALEHHQDVRRNYDIKSQVSIAAFAEAELQKQNYESATKKEQPKPSFEQMITAVINARRSDDLEMKIVRADLYILAKDGTEFLFEIKAPKPNKGQCLEVLQRLLRFHLLRGVNRPQLQAYYAMPYNPYGITKADYKWTQAKSYLPFEEAVIIGNEFWNIIGGATAYEELLEIYLEVGRDKSKYMLDALAFGF
>CP026692.1|AVH71763.1|3727108_3728545_-|DNA-cytosine-methyltransferase
MPAQICYLIYESGMIKNKHMVTSVYAQQLELFQLFESANVISFQSKFTFIDLFAGIGGFRIPLQELGGICLGYSEIDKEAIKVYQNNFIRYANVEEAYLGDITNLNKLPFEIDLLVGGVPCQPWSIAGKLQGLDDPRGKLWIDVFRVVKANQPKAFIFENVKGLTEPRNRKSLEYILNNLTACGYVVKYQVLNSYDFGLPQDRDRIFIVGIRNNLEKCWAFTFPNSLDKQLKLYDVIAGIQHSNFAKKKFPPEILFFDGKIPGSRGRFQKIDELNDFFTFADIRDGHTTIHSWDLIETTLREKFICQTILRNRRKKIYGLKDGNPLEFEVLQALIPSLQMEEINTLVAKEILRLIESKGYEFINSKISSGINGISKIFLPHAEAIGTLTATGTRDFVATISIECKEPEAYKQTFIQEIYVKKNYKPLTAKDYARLQGFPETFKIAESESTAKHQFGNAVSVPVVYHLAKALLKIIFIG
>CP026692.1|AVH71764.1|3728564_3732551_-|magnesium-chelatase-subunit-H
MFTHVKSTIRHIAPDNLRGRSLIKVVYVVLESQYQSALSQAVRTINANNPNLAIEISGYLIEELRDPENYEEFKREIESANIFIASLIFIEDLAQKVVAAVEPHRDHLDVSVVFPSMPEVMRLSKMGSFSLAQLGQSKSAIAQFMRKRKEKSGAGFQDGMLKLLRTLPQVLKFLPMDKAQDARNFMLSFQYWLGGSPENLENFLLMLADKYVFKGLEKHNFAPSTYEQPVVYPDLGIWHPLAGSMFEDVREYLNWYTARKDISSDLKDPLAPCVGLVLQRTHLVTGDDAHYVAMVQELEALGARVLPVFAGGLDFSKPVDAYFYEPTTNIQLVDAVISLTGFALVGGPARQDHPKAIESLKRLNRPYMVALPLVFQTTEEWMDSDLGLHPIQVALQIAIPELDGAIEPIILSGRDGTTGKAIALRDRVEAVAERALKWANLRRKPKLDKKVAITVFSFPPDKGNVGTAAYLDVFGSIYEVMKALKNNGYDLPQLPESAEALMQEVIHDAQAQYNSPELNIAYKMSVPEYEALTPYSHRLEENWGPPPGHLNSDGQNLLIYGKQFGNVFIGVQPTFGYEGDPMRLLFSRSASPHHGFAAYYTYLEQVWKADAVLHFGTHGSLEFMPGKQMGMSGDCYPDNLIGSIPNLYYYAANNPSEATIAKRRSYAETISYLTPPAENAGLYKGLKELSELIASYQTLKDSGRGISIVNSIMDKCRIVNLDKDINLPETDAKEMSADERDNIVGNVYRRLMEIESRLLPCGLHVIGKPPSAEEAIATLVNIASLDRQEEELQGLPGIIANSIGRNIDDIYQNNDRGILEDVQLLQDITLATRAAVTALVQEQIDAQGRVSLVSRLNFFNMGKKEPWVEALHKAGYPKVDTATLKPLFEYLEFCLQQVCADNELGALLRGLEGEYILPGPGGDPIRNPDVLPTGKNIHALDPQSIPTTAAVQSAKIVVDRLLARSKVENEGKWPETIACVLWGTDNIKTYGESLAQIMWMVGVRPVPDALGRVNKLELISLEELGRPRIDVVINCSGVFRDLFINQMNLLDQGVKMAAEADEPLEMNFVRKHALQQAEDMGINLRQAATRVFSNASGSYSSNINLAVENSTWDSEAELQNMYLNRKSFSFNSDNPGIMDESRQIFESTLKTADATFQNLDSSEISLTDVSHYFDSDPTKLVASLRGDGKKPASYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLNHGYEGVRELSKRLVNTTGWSATAGAVDNWIYEDTNETFIKDEEMQKRLLNLNPHSFRKIVSTLLEVNGRGYWETSEENLDRLRELYQEVEDRIEGIE
>CP026692.1|AVH71765.1|3733243_3734386_-|ADP-heptose:LPS-heptosyltransferase
MQVFIDQSLRPHPHIAVFGSSKVGNYVVTTPLLRGLKEKYPDCTLDFFGSDVTQDFELYCPYIDWRFSLYSDRDDILAQLAQVVHQRQQVAGSYDLAINCDEFSPINLVMTTALRPLYVTGAALTQDFQKKLDGGENANSIQRLLQDQDWNSSELVKRHQGVIQSNYIGEIFCRLAYVETDFFKLELPSQEPNFPVPDVLIHVTATRPAKLWPIHAWQQVIQWCAAQGLSVGLVGSAPKIQKTLYNAGSIEDDLLQTTALIDLRGQTSLLELAGAFLQTKAFISVDAGPLHIAVAVGCHTIALFGNDVDGDGASPIHLWKPRQPHVHLALSTFKCTLCQEHSFSNKSCLVPDHPCMSHLSFEQVIDYLQCLLKKVCQKMV
>CP026692.1|AVH71766.1|3734573_3735536_-|glycosyl-transferase-family-protein
MSDNSSTDQSIFYPRFRDSEPLAASKYYTEKYDCDLAIPSYLGIGSCVCYTPLVEALSLKKGRFIKLLTAPLNYYKKAQENGYAIWENNPYIETIINADDIDPNIMVEVSVESDNFCQSRHIIENICFAHGLRPRQLRGSLFLSHAEMQWGLKTLAHLKRPVVCICPYGTSSSIKDSPWHLDNWLELVDYLKNQVSFLHIGNNDFEQKTFSIFTPKTTIRQAMALIWASDLYVGFDTGPSHIATAFQKPTLVLWDAVKKASLEEEKQEGFSIAHLRRWSYPQNQNLVIIGEKKKEVLEDCLEFILEQLNSFNRLSKLITN
>CP026692.1|AVH71767.1|3735942_3736851_+|hypothetical-protein
MLLSTNFKKLIAVRSRMVYEFLLNLLPNPQVPPKPEIELMFLTMTGTKHLPFLQQCLFSLYTSWSSIPKLQIVSDGTITISKLEEALAWWTGTKSFSYWEQSVSYHRQKGRESVAQFAEKNLLGKKLAILLEFGEYGATLWCDNDILWFKELPELPLKDEDSDLPILKVSEDFMASYDIDLLEQSLSHLYSPPFINTGLVFLKGNLLQASNLDHLLKIAAENSEFHTEQTIIAEAAYQLGNSTWSPEEIACFAKDKFSITSNYAGKQWAARHYFSPVRHLFFRDAFALRLGLKQKLFEQQNI
>CP026692.1|AVH71768.1|3736983_3738240_-|group-1-glycosyltransferase
MNSLNILHINNWFGLGGAFIAAYNLHQSLSRAGVESFFAYKDEIHGVFQEKANDLKNTVQIVQRKNQFVDLANSITRRIGLNYVANPSIAALKHQACYQNAALLNFHLLHDDYFSYLMLPSLTRDKPAVYTLHDMWSFTGHCAYSYDCLKWQTGCGKCPYPNALPPIQRDATSLEWKLKNWAYRHSNLTIVAPSRWLAECAKQSMLNCFPIHHIPHGIDTVAYQPLDQQQCQTELGIPQHKKVLIFGAQDMTNRRKGGDLLLKALSYIPKSLKAETVLLTFGDEAKTISNAAEMEVLHLGYISSDRLKAVAYSAADLFLFPTRADVCGLVSLEAAACGTPTVAFNVGGVPDLVRPGITGYLAKPENADDFSNGIVQLLEDVNLRDRMSQNCRKVAVEEYSLEVQAQRYIQLYQQILNL
>CP026692.1|AVH71769.1|3738338_3739076_-|type-11-methyltransferase
MHDNLMKNKWNERAKKDAFYYIETTFYDGDIDAFFALGEERTKLIVDPILTQLLPSASNASVLEIGCGLGRFSRALSKRFRSVIAVDVADEMIRQAKELSSEEQYANLKFYTNDGTSLSLIESESVDFVFSYEVFQHMPSLKVILNNFTEIRRVIKITGKALIHLRTETVSPLTKFQIFAKSHLPKFLLKLLGLSSIDKTWTGTTLNTKNIDQLCKSTGLEILQLINDPTHAPNTRIFVLLSPMK
>CP026692.1|AVH71770.1|3739353_3744303_-|non-ribosomal-peptide-synthetase
MKTLDELLLELGCLNVKVWADGDNLRYQAPKGILTSDILAQIKTYKTEILAFLNQSTIESQSIIKPVDAIIKNDVPLSFTQQQFWLLHHLEESNYIYNMVRAFRLEGDLDIPSFEQAIQCLIARHSILRTGFKVVNGSPVQVITPHLTFDIPVIDLQNLSETERISQAQQLLLQERTRAFDLNQSPVWRVTLIRLHPQIHLLMFNLHHIICDDWSIQVFLRELSALYQEVLIGKTASLPELPIQYADFAHWQNQQIAFDKYHQQLNYWQQQLADVVPILELPYLSDRSNHNTKQAFQSGIVPLSVSAEVTNKLKQLSQQSGTTLFTTLLTAFAILLSRYTHQEDLVVGTVIANRTLAQTNPLIGAFVNTLGLRIQIPDNPTFRELLTEVQKVVLEAYAHSEVPFVKVIEALKIDRKSGNNPLLQVMFTLETIAQDKLQLPGVMTTVLELNKPTAGATFDLTLNLWETNSELQGKLEYNAYLFNEEIIQRISGHFQTLLARIVESPNQRIGNLSILNATEREQLLGKEIQEIESEFLCLHELFEAQVEKTPADVALKFEGQQLTYRELNQQANQLAHHLQTLGVKPETLVGICVERSLEMIVGILGILKAGGAYVPLDPNNPQERLNHILEDAQVQVLVTNSQLRNTLDQSNFVVYLDKEADKIAQYPGNNLVSGVQGNNLAYMIYTSGSTGKPKGVLITHHNVVRLFKATEDWYHFNETDVWTLFHSFAFDFSVWELWGGLLYGGCVVVVPSEVSRDSQAFYNLLVAEQVTVLNQTPSAFYQLIQVDEHSKTTEKLSLRVVIFGGEALSLPLLQPWFERHGDQLPQLVNMYGITETTVHVTIRRLTLADVKATSSLIGLPIPDLQIYLLDKYQQPVPIGVVGELYVGGGGVARGYWRRSELTKERFVPNPFSNQQQGRLYKTGDLARYLPTGELEYKGRIDHQVKIRGFRIELGEIKALLSGHQAVQECVVLAREDEPNNKRLVAYIVPDHIQASTILNLVSLREQAILSDAPLGTAKGDRSFNELANGKQCFPQKTGANSLGDRQSTWNSLETYIQDLRHYLQKKLPEYMIPSAFVVLEKFPLTSNGKVDSRALPIPENFKNGLESSFVAPSTPTQAILANLWAAILSIEKVGIYDNFFDLGGHSLLATSLLFRIRQAFAIDFPLRCLFETPTIAALSKLIESFKAHPTLSSNGIPSTMLAMSRLERSPSTPVPLSLSQQGLWSLHQSASTVATLNSSTLMRVKGSFLPEVVEQSFNEIVRRHENLRTVFTVINDQPMQIVLPHLHLPLIYENLQHLPPEARQSEAVRLGIKIRQQPFNLAVAPLIRTALFQLNPDEHWLVITMHHLITDGWSFSVLLQELNALMQAFANGRPSPLPALSCQYADFALWQQQVYNESAIAQQLSYWQRKLVDQELYPSPSLMLSSKQAGHRFIHLPESLVRSVEGLGRSQRVTSFVILLSAFKLVLAKWSQQNEILILATLGNRTGLDTERMIGCFINDVILRSLILPEQTGSTVIKQLQETVNEAIEHKEVQLHRVINQIQHLRPLNLLASITMTPSVQDQMPGWEAIASSQWGDIPMELYGKTPPLELYVELSKTIRIRAKYGTEKFTAETIDRLLNNYQEMLTKLVSHSEMTVSNLFKTIHSEYF
>CP026692.1|AVH71771.1|3744299_3746228_-|non-ribosomal-peptide-synthetase
MNNPLQQLIQRHHVHPNNSFIKFDKKDVELSVPERFQKQVDMHPEHIAVKTGEHVFTYNALNQFANRIARAILTKREHLRRSKAERQAEPIAMLFESGAPIIAAILGVLKVGKFYVPLDTSLPQTRISYILKDSQAGLLLTDSRNISFAKKLQISGLEILNIDEIDFSISCENLDLPLQPDNFAYIIYTSGSTGQPKGVIQNHRYVLHLTMNYTNSSHICANDKLALLYSPNFAGAVRDIFCSLLNGATLLPYNVKQEGLIGLSSWLKQQEITIFFAVATMFRHFVNTLTQQDKFPKLRLIQVGSETVYKKDVELYKQHFSDDCIFVANLGGSEISPIRQYFVDQETEITGSTVPAGYAVEDHEVLLIDDQGKLVEFNQIGEIVVRSRYLFCGYWQRPDLTEAVLFKDVQEENKLLYKTGDLGCMLPDGCLLHLGRKDFQVKVRGYRIDVSEVEMALINTNLIREAAVVASPDHLGLRAYIVPLVPQQALSLRELRSLLLKSLPDYMVPSTFMTLEALPLTPNGKVDRLGLPAFSQVQRAQLESLVLPHTPTEQILIDIWTKILGIEEIGIHDNFFELGGHSLLVNELILELFNTFSINIPLITVFELPTIAQLAKRIENTRRILVQKDVLDSTDDCEEGML

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Crispr_ID: CP026692_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_19

3876227-3877119

Orphan

I-D,II-B

Consensus_repeat	Method
ATTGCAATTAACTAAAATCCCTATTAGGG----------ATTGAAAC	PILER-CR
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	CRISPRCasFinder
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	CRT

12 spacers

The CRISPR arrays of CP026692_19

>merge|CP026692|19|3876227-3877119|PILER-CR,CRISPRCasFinder,CRT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAACAACTACACTTATAGCGATCGCATATACGATTATATTGCAATTAACTAAAATCCCTATTAGGGATTGAAACAGCGAATTTCTGCTAGTTCATTATCTTAATCATTGCAATTAACTAAAATCCCTATTAGGGATTGAAACTATCACCTATATATGCGTGTCTCTCACTGTAATCATTGCAATTAACTAAAATCCCTATTAGGGATTGAAACGGCGACATGACAACCCCACAGCTAAATTCCCTAGTATTGCAATTAACTAAAATCCCTATTAGGGATTGAAACAGAAGATACCGAATCAAAGCAGTTGCTGACAGCATTGCAATTAACTAAAATCCCTATTAGGGATTGAAACTGGCAAAAGAAAGATTCACCTAGATCCTTTTGAAAATTGCAATTAACTAAAATCCCTATTAGGGATTGAAACAATAGGCAAGAATAGCAATGGTGACACTTTTGAATTATTGCAATTAACTAAAATCCCTATTAGGGATTGAAACAGCAGAAGCCAATCTCAATAGACTGGAATTTAACAATTGCAATTAACTAAAATCCCTATTAGGGATTGAAACGCCGCCAGCTTCTACGCTACCATGTGGCAGCAAAACATTGCAATTAACTAAAATCCCTATTAGGGATTGAAACGCCAATAAAGATGTTTTTTATAAAGGTGTTGATTATTGCAATTAACTAAAATCCCTATTAGGGATTGAAACCCCAGAGAAAAGGGTATGCCCTGCGTAGTTAGGAATTGCAATTAACTAAAATCCCTATTAGGGATTGAAACTAAATCTTTTATCTTCAAAAGAGAACAGGTTTACAAATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC

>CP026692|19|6|3876227-3877119|PILER-CR
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AACTACACTTATAGCGATCGCATATACGATTAT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AGCGAATTTCTGCTAGTTCATTATCTTAATC
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	TATCACCTATATATGCGTGTCTCTCACTGTAATC
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	GGCGACATGACAACCCCACAGCTAAATTCCCTAGT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AGAAGATACCGAATCAAAGCAGTTGCTGACAGC
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	TGGCAAAAGAAAGATTCACCTAGATCCTTTTGAAA
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AATAGGCAAGAATAGCAATGGTGACACTTTTGAATT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AGCAGAAGCCAATCTCAATAGACTGGAATTTAACA
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	GCCGCCAGCTTCTACGCTACCATGTGGCAGCAAAAC
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	GCCAATAAAGATGTTTTTTATAAAGGTGTTGATT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	CCCAGAGAAAAGGGTATGCCCTGCGTAGTTAGGA
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	TAAATCTTTTATCTTCAAAAGAGAACAGGTTTACAA
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC

>CP026692|19|18|3876227-3877119|CRISPRCasFinder
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AACTACACTTATAGCGATCGCATATACGATTAT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AGCGAATTTCTGCTAGTTCATTATCTTAATC
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	TATCACCTATATATGCGTGTCTCTCACTGTAATC
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	GGCGACATGACAACCCCACAGCTAAATTCCCTAGT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AGAAGATACCGAATCAAAGCAGTTGCTGACAGC
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	TGGCAAAAGAAAGATTCACCTAGATCCTTTTGAAA
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AATAGGCAAGAATAGCAATGGTGACACTTTTGAATT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AGCAGAAGCCAATCTCAATAGACTGGAATTTAACA
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	GCCGCCAGCTTCTACGCTACCATGTGGCAGCAAAAC
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	GCCAATAAAGATGTTTTTTATAAAGGTGTTGATT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	CCCAGAGAAAAGGGTATGCCCTGCGTAGTTAGGA
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	TAAATCTTTTATCTTCAAAAGAGAACAGGTTTACAA
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC

>CP026692|19|7|3876227-3877119|CRT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AACTACACTTATAGCGATCGCATATACGATTAT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AGCGAATTTCTGCTAGTTCATTATCTTAATC
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	TATCACCTATATATGCGTGTCTCTCACTGTAATC
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	GGCGACATGACAACCCCACAGCTAAATTCCCTAGT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AGAAGATACCGAATCAAAGCAGTTGCTGACAGC
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	TGGCAAAAGAAAGATTCACCTAGATCCTTTTGAAA
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AATAGGCAAGAATAGCAATGGTGACACTTTTGAATT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	AGCAGAAGCCAATCTCAATAGACTGGAATTTAACA
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	GCCGCCAGCTTCTACGCTACCATGTGGCAGCAAAAC
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	GCCAATAAAGATGTTTTTTATAAAGGTGTTGATT
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	CCCAGAGAAAAGGGTATGCCCTGCGTAGTTAGGA
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC	TAAATCTTTTATCTTCAAAAGAGAACAGGTTTACAA
ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH71872.1\|3879357_3880095_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71865.1\|3869783_3870557_-\|membrane-protein-of-unknown-function-DUF1980	unknown	unknown	gnl\|CDD\|274870
CP026692.1\|AVH71870.1\|3874833_3875925_+\|alanine-dehydrogenase	unknown	unknown	gnl\|CDD\|240630
CP026692.1\|AVH71871.1\|3877919_3878975_-\|tRNA-dihydrouridine-synthase	unknown	unknown	gnl\|CDD\|129820
CP026692.1\|AVH71869.1\|3874182_3874353_-\|CAB/ELIP/HLIP-family-protein	unknown	unknown	gnl\|CDD\|177653
CP026692.1\|AVH71878.1\|3887704_3888049_-\|protein-of-unknown-function-DUF433	unknown	unknown	gnl\|CDD\|225291
CP026692.1\|AVH71880.1\|3890626_3891742_+\|thiamine-phosphate-pyrophosphorylase	unknown	unknown	gnl\|CDD\|235054
CP026692.1\|AVH71875.1\|3883547_3883919_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71874.1\|3882222_3883452_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP026692.1\|AVH71864.1\|3868231_3869731_-\|Ig-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|235351
CP026692.1\|AVH71862.1\|3866046_3867333_+\|sulfite-oxidase	unknown	unknown	gnl\|CDD\|239028
CP026692.1\|AVH71866.1\|3870635_3871688_-\|permease	unknown	unknown	gnl\|CDD\|223773
CP026692.1\|AVH71873.1\|3881145_3882048_-\|delta-9-desaturase	unknown	unknown	gnl\|CDD\|224316
CP026692.1\|AVH71868.1\|3873522_3873816_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH71876.1\|3884939_3886616_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270453
CP026692.1\|AVH71861.1\|3864491_3865946_+\|class-V-aminotransferase/cysteine-desulfurase	unknown	unknown	gnl\|CDD\|223594
CP026692.1\|AVH71863.1\|3867369_3868209_+\|sulfite-exporter-TauE/SafE	unknown	unknown	gnl\|CDD\|376667
CP026692.1\|AVH71877.1\|3887350_3887701_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375906
CP026692.1\|AVH71879.1\|3888205_3890116_-\|pectin-lyase-fold-protein	unknown	unknown	gnl\|CDD\|284923
CP026692.1\|AVH71867.1\|3872376_3873444_-\|WD40-repeat-containing-protein	unknown	unknown	gnl\|CDD\|238121

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH71874.1\|3882222_3883452_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.762e-13
CP026692.1\|AVH71865.1\|3869783_3870557_-\|membrane-protein-of-unknown-function-DUF1980	gnl\|CDD\|274870	TIGR03943, TIGR03943, TIGR03943 family protein. Members of this occur in gene pairs with members of pfam03773. The N-terminal region contains several predicted transmembrane helix regions while the few invariant residues (G, CxxD, and W) occur in the C-terminal region.	1.65503e-88
CP026692.1\|AVH71870.1\|3874833_3875925_+\|alanine-dehydrogenase	gnl\|CDD\|240630	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains. Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms.	0
CP026692.1\|AVH71867.1\|3872376_3873444_-\|WD40-repeat-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	4.51754e-95
CP026692.1\|AVH71869.1\|3874182_3874353_-\|CAB/ELIP/HLIP-family-protein	gnl\|CDD\|177653	PLN00014, PLN00014, light-harvesting-like protein 3; Provisional.	0.00114532
CP026692.1\|AVH71878.1\|3887704_3888049_-\|protein-of-unknown-function-DUF433	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	0.000146007
CP026692.1\|AVH71879.1\|3888205_3890116_-\|pectin-lyase-fold-protein	gnl\|CDD\|284923	pfam07602, DUF1565, Protein of unknown function (DUF1565). These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterized domains such as pfam00395 and pfam03422.	3.71556e-46
CP026692.1\|AVH71876.1\|3884939_3886616_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270453	cd14750, PBP2_TMBP, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose; possesses type 2 periplasmic binding fold. This group represents the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.34699e-83
CP026692.1\|AVH71864.1\|3868231_3869731_-\|Ig-like-domain-containing-protein	gnl\|CDD\|235351	PRK05137, tolB, Tol-Pal system protein TolB.	0.00586695
CP026692.1\|AVH71862.1\|3866046_3867333_+\|sulfite-oxidase	gnl\|CDD\|239028	cd02110, SO_family_Moco_dimer, Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). .	3.31823e-129
CP026692.1\|AVH71866.1\|3870635_3871688_-\|permease	gnl\|CDD\|223773	COG0701, COG0701, Predicted permeases [General function prediction only].	1.04395e-76
CP026692.1\|AVH71873.1\|3881145_3882048_-\|delta-9-desaturase	gnl\|CDD\|224316	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism].	4.11786e-106
CP026692.1\|AVH71877.1\|3887350_3887701_-\|hypothetical-protein	gnl\|CDD\|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	9.4609e-12
CP026692.1\|AVH71861.1\|3864491_3865946_+\|class-V-aminotransferase/cysteine-desulfurase	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	1.75391e-89
CP026692.1\|AVH71863.1\|3867369_3868209_+\|sulfite-exporter-TauE/SafE	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	6.27042e-35
CP026692.1\|AVH71871.1\|3877919_3878975_-\|tRNA-dihydrouridine-synthase	gnl\|CDD\|129820	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family. This model represents one branch of COG0042 (Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family). This branch includes NifR3 itself, from Rhodobacter capsulatus. It excludes a broadly distributed but more sparsely populated subfamily that contains sll0926 from Synechocystis PCC6803, HI0634 from Haemophilus influenzae, and BB0225 from Borrelia burgdorferi. It also excludes a shorter and more distant archaeal subfamily.The function of nifR3, a member of this family, is unknown, but it is found in an operon with nitrogen-sensing two component regulators in Rhodobacter capsulatus.Members of this family show a distant relationship to alpha/beta (TIM) barrel enzymes such as dihydroorotate dehydrogenase and glycolate oxidase. [Unknown function, General].	2.59833e-154
CP026692.1\|AVH71880.1\|3890626_3891742_+\|thiamine-phosphate-pyrophosphorylase	gnl\|CDD\|235054	PRK02615, PRK02615, thiamine phosphate synthase.	0

>CP026692.1|AVH71870.1|3874833_3875925_+|alanine-dehydrogenase
MEIGVPKENKDQEFRVGLSPSSVRVLRENGHSIFVETQAGNGAGFSDDDYRSAGAEIVPTSETAWNRELVVKVKEPLKSEYKFLQKGQILFTYLHLAADRKLTEHLIDCGTTAIAYETVEQPGANRLPLLTPMSVIAGRLAVQFGARFLERQQGGRGVLLGGVPGVKPGKVVILGGGVVGTEAAKIAVGIGASVQILDVSVERLSYLETLFGSRVELLYSNSAHIEAAVIEADLLIGAVLVLGRRAPILVSRELVKQMRPGSVIVDVAVDQGGCIETLHPTSHTNPVYIEEGVVHYGVPNMPGAVPWTSTQALNNSTLPYVVQLANLGILALEVNPALAKGVNVQNHRLVHPAVQEVFPDLVN
>CP026692.1|AVH71869.1|3874182_3874353_-|CAB/ELIP/HLIP-family-protein
MTQTQPTITPKLEEPKFGFNEYAERLNGRAAMIGFGLLLVIEYTSNQGVLSWLGLK
>CP026692.1|AVH71868.1|3873522_3873816_-|hypothetical-protein
MNAVLPRFLKSTYRKEPLISVLMTMGVMDALIGGLNDSWSLFAFGLGTAGIALGFKLWRFQQRRSLPEEPVVQHYLPSRSSSAPLPMLSVSKKKPPL
>CP026692.1|AVH71867.1|3872376_3873444_-|WD40-repeat-containing-protein
MSIEGRGGGKFLRPDIILAFMAAVALPVITWEGFYIHQAHAAIEVTPNFPANTNFANAQLLYTLIGHNGTIKSLAFTPDSRILVSGGAENEGVIRLWNLANGKKLATINKAHKAAVESLVISPDGQTLASCSDDNTINLWSLKNLKFSRSFVGHTSNVLSLAVSPDSKVLVSGALDGIRLWDLLQQRPLGTIVRFDNLIYTLAISPDGQTLASGDNKGVIKLWNLSTGKLISQLAAHSDVVSAVVFTPDGQTLVSASHDRTIKLWNINTGELVRTLTGHNNWVNAIALNPDGQTLASAGRDGIKLWNLSTGELINTLSGHTDWVSAIAFSPNGKILASGGFDRQIKIWGIPTKRN
>CP026692.1|AVH71866.1|3870635_3871688_-|permease
MNQLNNGFTLFLSLLVEAMPFLLLGVLFSSLLLFFVDERKLVERMPKNPLLGALVGSMIGFLFPVCECGNVPVARRFLIQGVPTPVAIGFLLAAPTINPIVIWSTWTAFRDQPEIVVLRVVFSLAIATIIGYVFSFQKDLNPIIQPAIARYMKFNPPAQPETKRRGKRYQEQQEETVPNLLQSGTYILGGKAGIPLRIDANLVPPTSMSTSNKPLAAKLRLVVDNSIQEFRELGGVMVIGSAIAATIQVLAPRELILSLGAGPITSIVVMLILAVVVSICSTVDSFFALSFASTFSSGSLLAFLVFGPMIDIKGIGLMLSIFKPKTVFYLFALAAQLTFVFTLFLNLHVF
>CP026692.1|AVH71865.1|3869783_3870557_-|membrane-protein-of-unknown-function-DUF1980
MTNKNPKSRIPNLLLPWLDAVAITAWGTLMLRYWLTNKLNLLIHPNYIWFVVVTGIGLIIIGFFKMQELWQRRRRDVTPNAPHISLFPPGWGSALLLTTAILGFIITPQVFASDKALQRGVTTDLLGSTRVKPQAFRATVRPEERSLVDWVRTVNVYPEPDTYTGQKVKVQGFVIHPPDIGKEYLFLARFVLTCCAADAYPVGLPVKLQNNQEPYSADTWLEVEGQMVTENLAGKRQLTIAANSLKKIPQPQNPYSY
>CP026692.1|AVH71864.1|3868231_3869731_-|Ig-like-domain-containing-protein
MTKSKAFIQPLDRIAIALMLLLSVLIGLIILQGDVVTARVREFTWQNQQIGAEDNSFTLTFSRPMEVKSVEDNLKIEPPLAGKFSWAGRRMVYTLVTPAPYGTNYKVQLQGAKDKFAEQEGKNRLIQPFTGSFRTRDRVILYIGTEQEEQGRLVLYNLTQEQKRILTPKDLIVIDFESFPDGEKILFSARAANNQDLLSAQLYTVTTGVSAKSGQKAEPEGKVDLTLDSKDYQNLKFDLSPDGQTIVIQRGNKTNPGDFGLWFMPATSDGSAEKPTPKRLKSQPGGDFMVTPDSKAVAVAQGQGAAILPLQGDASKPLDFLPQFGLVQAFSKDGSQAAMVKFNTDYTRDLFLVTNQGVQKQLLKTTGSILSCQFDIASPTLYCLLTQLVSKEQYIEQPYVVAIDLKTGQQKPLLVLPPAQRNVQMSLSADGLGLLFDQVVPQTNPPASLPANTLKTDDGDTIATSSLWLMPLLPIADAATVEIRPEQLPLAGFHPRWLP
>CP026692.1|AVH71863.1|3867369_3868209_+|sulfite-exporter-TauE/SafE
MIDFSWLILVSGGLISGVIAGLLGIGGGIITIPLLVTLGYTPVQAIATSSLAIVITSISGSLQNWWMGYFDFKRVIYLGIPAFLTTGIGVYFANKIPSYIILFTFGIILLANIYLIELRKQLAFQEIEDTAPVFNPLVSKIGTGGAAGILAGLFGLGGGTIMVPLQMLLLKEEIKVAIQTSLGVIVITALAACTGHALEGNILFVQGIVLGCGGLLGVQISTRTLPKLPDSTVNLVLRIFLGILSIYIFWEAWTNYQFIVSNPINQELSACYQQDSQLL
>CP026692.1|AVH71862.1|3866046_3867333_+|sulfite-oxidase
MSDENLFDQEDYLQARVEQCIWQKSTDAGISRQRFLKILATMVGATAIGGLAKPALAHSQTAVKTKGSKILKPLPPGYISHSKGTLEMNWEAMYGRGYLVPNDWFYVHNRSAPPTFDPFTWRLQIHGTGVSAPCEFTYDEIIAMPSISVTCAIECAANGRRFFEEAYNTPLPGTRWRLGAIGVAEWTGVPLSMLLERAGLKSTAKDVLVEGADVDSLDSKQTNKSKFSSVVPISKALADNSLVVYAMNGEPLPPDHGQPCRVLFPGWGGNANVKWIERIEVSETPIYTQWVTEQMVLVGADYPAIAPYKGKLITYQNVKSAFELAWPATLSARSHLLRGRSWSGKGKIVRVEVSLDGGKTWQFARLREPNFPFAWVRWDIEWNPIPGEYFLQARATDNLGNTQASTVPWNDSGLLYGGVVSHPVTVQG
>CP026692.1|AVH71861.1|3864491_3865946_+|class-V-aminotransferase/cysteine-desulfurase
MTDILAMDAKIKQEAVQFPLFAENCDSFWDKEIRPLFTDESLSFKVKTLNGNYVKYVNLDNGATTTPFATLKQYVDEMLDTYGSVHRGSGQKSIITTREYDASRNIIRDFVGSSSNNYVIFAKNTTEAINGAATLWAKKPGKILVSDIEHSSNLLPWVTRDEVVQYRTQPDGSVSITEIEDIFKAHQNLPEAEQIKLVTITGASTITGYRPPIYEIAALAHRYGAKIFADVCQLIQHERVDMRADDHPCHLDFVAFSGHKMYAPYGTGVLLGPKEFFDSSYPYQIGGGNLPYITRNLEIKRFYTERAHDPGTPNAMGAIAIAKAIEIIEALGRSRIANYEHSLVEFTFTRLQAISGVKVHIPGDNLAHVIPLDIDGFDGRLVAEILAQEYGIGVRAGAFCTYEYIRKLKNISDEQDWEIAQEVDRGITRNIPSIIRASFAVYNTLEDCDRFIDAIAQIAKNGLAHYLPNYTQDEITGIWTAIEG
>CP026692.1|AVH71871.1|3877919_3878975_-|tRNA-dihydrouridine-synthase
MISLSPILQARLSQPLKIGSFEVKSRVLQSPLSGVTDMVFRRLVRRYAPDSMMYTEMVNATGLHYVKQLPKIMEVDPNERPISVQLFDCRPDFLAEAAIKAVAEGADTVDINMGCPVNKITKNGGGSSLLRQPEVAEAIVREVVKAVDVPVTVKTRIGWNDNEITILDFAKRMEDAGAKMITVHGRTRAQGYNGNARWEWITRVKEVLSIPVIGNGDIFSVEAAVKCLEQTGADGVMCSRGTLGYPFLVGEIDRFLKTGEILPTPTPIERLECARDHLQALWEYKGDRGVRQARKHMTWYAKGFVGAAELRGQLSLVEKVDQGLAMIDQAIEKLANGYELEEETQASLVML
>CP026692.1|AVH71872.1|3879357_3880095_-|hypothetical-protein
MKPFLFSALLITSSAIAVACQPTPQPPIANQSTASEISATQIDNQEKAGFNSEIYLLANPDVVKLIQEGKFKSALDHYEKVGKSGKNSKGEVIEGYFTGTSGNDTVTGFGQSPCLTGINFEIVSDKKGPFPIRPKTLGVGEVDTLIATKGSKNEFLLGSFITIANPKAEPFYVGKGDADYARIQNFTKSQDRISLAGQPQQYKFETVKGNFRILTASGDLIAIVEGIDKLEAGKVFKKYGVFTLK
>CP026692.1|AVH71873.1|3881145_3882048_-|delta-9-desaturase
MTANFGAFAKSVGVRVASRREAIAPERGNSPRLSWTNVVFFAAFHALALLAPWFFSWPALGLLVFLHWLFGSIGICLGYHRLLSHRSFQVPKWLEYAIALIGALALQGGPIFWVGGHRQHHAHTEDIDLDPYSAQRGFWWSHILWIFYPRPEFFDYETYKKYAPDLARQPFYCWLDRYFLLLQIPFGLLLYALGGWSFVIYGVFVRCVLLWHSTWFVNSASHLWGYRTFDANDGARNLWWVSLVTYGEGWHNNHHTYPHLAKSGLSWWEIDVTWWSILVLQTLGLAKKVVSRPPQGATHG
>CP026692.1|AVH71874.1|3882222_3883452_+|TetR-family-transcriptional-regulator
MSSQLISTRQRLIQAALELFSAQGVSATTTRQIAEKAEVNEVTLFRNFGNKHGLLLAVLEESAAFKDLGESLVRRATPPGNVYQALKDYASDSLHALERVPEFVRSVVGEADQFPAENRRALGRGVTEANRYVAQYLATVIQQGHLNTYLPAEKLASLLNGMILGYAVIEFTSEFHELWEDRDDFLENLVELFLHGAMSSSAESATNSLQGGFITTEVADLPASLVHEILQQARKWGVRDYALAYVLFGAGLSATEIISLERSHQIYDTQGHFLQITIPGFVRQVPVNQWILGKRYGSYTNNPLIKWHKSRKDAQTAMFLNETGKPISESELQTRWQVWSEGLLTPQGQTPVIAQAQQTWRVEMLMRGITLENLIILTGCDRAQLQPYARRAKEKAALEQATRLDHKPG
>CP026692.1|AVH71875.1|3883547_3883919_-|hypothetical-protein
MARLKRSSPTLEKALRRIAGMRSISPTLEFGNGLNLTDYDSHIQTLQTQLSTYNTLLSSIDEMAGRLSLIEEELGGYSEKMLMSVATHYGKDSLQYVQAGGKSRKKLSRRSSNTQSPSDTVSL
>CP026692.1|AVH71876.1|3884939_3886616_-|ABC-transporter-substrate-binding-protein
MDLSEPPKLLVPYVSGLIILCISVLWLVEQFVIWFRNRTSDFPFEPLIATATALGLLLVSPGLEEKDWVLSWVIFLIALGVLIWMMGKIQNIKRWQFQTVIAIFVLVNIILFWNYNQNDLHGETIKVMLQTEPNRESIDNYWTRTWEKSAAEQFQKDFGVKVEIIPVKTGVSKRLDQFLEALDPELPLKQGDEVDVFAIDVIWTGLMARHAANLQPIFQEFSNKFNLNIFENNKVRIGNNTKLVAVPWFIDNGLLFYRKDLLKKYFQSDLPPDTWQELEKKAMEIQDQERKLGNKDFWGFVWQGDPSEGLVCNALEWQFSHGGGTVVAVEKNVVNVDINVEATTKAFDRAKNWIGKISPPDILKDYDHKKAYQTWRKGNAAFMRNWLYAYSDTFKESPELPNLQGNVGVTLLPKGDDKNATYASTLGGWQLMINARSQGKQKKAAIEFVKFLLSREEQKSIALKTGKVPALKELYTDAEVLDKLPFLNDNEDNSKLNKLFTGESSVIVRRPSSLTGRSYPIISEVYLNGVRDILQRNVVNTRKAVEMLRDRVKNHLNT
>CP026692.1|AVH71877.1|3887350_3887701_-|hypothetical-protein
MRLLTDENFNGSILRGLIRRLPGLDIVRVQDIGLIHTDDSTILEWAANEEGILLTHDVATITVYAYERINKGLSMPGVVEVIATAPIGQVIDDLYLFVRCSKSGEYEGQILFIPFS
>CP026692.1|AVH71878.1|3887704_3888049_-|protein-of-unknown-function-DUF433
MSVQIEFQVTAPPFRWDEAGGIRIGQSRVTLDSLLATYHNGSTPEEIAVQYPVLCLGEIYAAIAYYLTHRQEIDNYLEQRRKKAQQQRNQFVQQYNLANLRQRLRDRYQPQGEF
>CP026692.1|AVH71879.1|3888205_3890116_-|pectin-lyase-fold-protein
MILPRVFTEYRRVDALLAKLKFLKSARLLFFSFSVLSFTVCMETVSIAFLGTSLDSAIAQIPSTPDSAPVNQKTPSQANVLFVNPGVGDDKAGNGSESAPVKTITQALRLAKANTVIMLSTGTYSAETGEEFPLILKPGISIQGNPSNQGKDIIIQGGGDYLSRSFGGQNVTIVGANQVFLTGVTVTNSNRRGYGLWIESSNPVVAENTFSGSTQDGISVSGNAAPTISKNYFDRNGANGITIAGNSSPQVKENVFHQTGFGINIAQNAAPILIGNQIQNNRSGIVVQANARPILRNNSIQDNKEDGLVAIAQAMPDLGSASEPGGNTFQNNARYDINASAAKQVIPAAGNNLVSDRISGKVDINGTTALVTENSQPAPNNVLRQIPASGEITFSGPEISETTNGHSNSISANNPVSGQLNSQLLPLMPANNVPLSTPISNQQPPTSSVAGFPTPSSLLGKQIPTNTSRVTTSSPAQPLDTPQLNYVRLDPNTIEFTTPESPSNSVAQPPVPSMKEQTQQPLPILETAAPGASELLPLPNRNIPIVNTRNLQTSSASIPDSGNSARQFGVRYRVVVPLATDKDRDLVKLLAPGAFPTVWQGQRVMQAGVFSSEYNAKEMLKTLSSKGLRVIMEPLN
>CP026692.1|AVH71880.1|3890626_3891742_+|thiamine-phosphate-pyrophosphorylase
MVTRTYDNSHFDESTNGVVVMVEPYSQKEQIQQVVYRILDANLDRAREGLRIIEEWCRFGLNNAQLALECKRLRQEVAKWHTSELRAARDTPGDPGTELTHPQEEQRASIKSVLQANFCRIEEALRVLEEYSKLFQPNMAKACKQMRYQVYTLESSLMGHQRHQLLWRSRLYLVTSPSESLLNNVEAALKGGLTLLQYRDKNADDSLRLEQARKLRQLCHIYGALFIVNDRVDVALAVDADGVHLGQQDMPIAVARQLLGSQRLIGLSTTNKEEMQAAIAEGVDYIGVGPVYETPTKVGKVATGLEYVSYAAKNCSIPWFAIGGIDANNVNDVIDAGAERVAVVRSLMQAEQPTLVTQYLLSQLNRIKPEL

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Crispr_ID: CP026692_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_20

4099479-4099587

Orphan

Consensus_repeat	Method
ATTCTCACTGCAGGATCGGGTAATGATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026692_20

>merge|CP026692|20|4099479-4099587|CRISPRCasFinder
ATTCTCACTGCAGGATCGGGTAATGATACTCTCATCGGCGGTGATGGGGATGATGTCCTGACTGGCGGTACTGGCAAAGACATTCTCACTGGAGGATCGGGTAATGATA

>CP026692|20|19|4099479-4099587|CRISPRCasFinder
ATTCTCACTGCAGGATCGGGTAATGATA	CTCTCATCGGCGGTGATGGGGATGATGTCCTGACTGGCGGTACTGGCAAAGAC
ATTCTCACTGGAGGATCGGGTAATGATA

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH72055.1\|4089814_4090222_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH72062.1\|4103404_4104298_-\|TPR-repeat-containing-protein	unknown	unknown	gnl\|CDD\|274350
CP026692.1\|AVH72063.1\|4104676_4105702_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH72051.1\|4083551_4084994_-\|glycogen/starch-synthase	unknown	unknown	gnl\|CDD\|234809
CP026692.1\|AVH72060.1\|4100615_4102301_+\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|234861
CP026692.1\|AVH72052.1\|4085128_4086121_-\|hydroxymethylbilane-synthase/porphobilinogen-deaminase	unknown	unknown	gnl\|CDD\|234612
CP026692.1\|AVH72059.1\|4093696_4096819_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
CP026692.1\|AVH72058.1\|4091781_4093062_-\|signal-transduction-histidine-kinase-LytS	unknown	unknown	gnl\|CDD\|377730
CP026692.1\|AVH72057.1\|4091180_4091642_-\|BON-domain-transport-associated-protein	unknown	unknown	gnl\|CDD\|335963
CP026692.1\|AVH72064.1\|4105823_4106993_-\|protein-of-unknown-function-DUF39	unknown	unknown	gnl\|CDD\|376627
CP026692.1\|AVH72065.1\|4107591_4108743_-\|protein-of-unknown-function-UPF0118	unknown	unknown	gnl\|CDD\|223701
CP026692.1\|AVH72050.1\|4081895_4083167_+\|bilin-biosynthesis-protein-CpeY	unknown	unknown	gnl\|CDD\|379311
CP026692.1\|AVH72068.1\|4111326_4111758_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH72054.1\|4087731_4089282_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277324
CP026692.1\|AVH72069.1\|4112744_4114508_-\|WD40-repeat-containing-protein	unknown	unknown	gnl\|CDD\|238121
CP026692.1\|AVH72056.1\|4090564_4090999_-\|CAAD-domain-protein	unknown	unknown	gnl\|CDD\|372936
CP026692.1\|AVH72066.1\|4108833_4109025_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH72053.1\|4086631_4087603_+\|lipid-kinase	unknown	unknown	gnl\|CDD\|234850
CP026692.1\|AVH72061.1\|4102639_4103260_+\|integral-membrane-protein	unknown	unknown	gnl\|CDD\|225030
CP026692.1\|AVH72067.1\|4109309_4110302_-\|family-8-glycosyltransferase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH72062.1\|4103404_4104298_-\|TPR-repeat-containing-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.34816e-10
CP026692.1\|AVH72051.1\|4083551_4084994_-\|glycogen/starch-synthase	gnl\|CDD\|234809	PRK00654, glgA, glycogen synthase GlgA.	0
CP026692.1\|AVH72060.1\|4100615_4102301_+\|dihydroxy-acid-dehydratase	gnl\|CDD\|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
CP026692.1\|AVH72052.1\|4085128_4086121_-\|hydroxymethylbilane-synthase/porphobilinogen-deaminase	gnl\|CDD\|234612	PRK00072, hemC, porphobilinogen deaminase; Reviewed.	2.18408e-174
CP026692.1\|AVH72059.1\|4093696_4096819_+\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0.000117667
CP026692.1\|AVH72058.1\|4091781_4093062_-\|signal-transduction-histidine-kinase-LytS	gnl\|CDD\|377730	pfam06897, DUF1269, Protein of unknown function (DUF1269). This family consists of several bacterial and archaeal proteins of around 200 residues in length. The function of this family is unknown. The family carries a repeated glycine-zipper sequence- motif, GxxxGxxxG, where the x following the G is frequently found to be an alanine. As glycine-zippers occur in membrane proteins, this family is likely to be found spanning a membrane.	0.00575456
CP026692.1\|AVH72057.1\|4091180_4091642_-\|BON-domain-transport-associated-protein	gnl\|CDD\|335963	pfam04972, BON, BON domain. This domain is found in a family of osmotic shock protection proteins. It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes.	1.31325e-07
CP026692.1\|AVH72064.1\|4105823_4106993_-\|protein-of-unknown-function-DUF39	gnl\|CDD\|376627	pfam01837, HcyBio, Homocysteine biosynthesis enzyme, sulfur-incorporation. This presumed domain is about is about 360 residues long. The function of this domain is unknown. It is found in some proteins that have two C-terminal CBS pfam00571 domains. There are also proteins that contain two inserted Fe4S domains near the C-terminal end of the domain. The Methanothermobacter thermautotrophicus gene MTH_855 product has been misannotated as an inosine monophosphate dehydrogenase based on the similarity to the CBS domains. Based on genetic analyses in the methanogen Methanosarcina acetivorans, this family is a key component of the metabolic network for sulfide assimilation and trafficking in methanogens. It is essential to a novel, O-acetylhomoserine sulfhydrylase-independent pathway for homocysteine biosynthesis, and may catalyze sulfur incorporation into the side chain of an as yet unidentified amino acid precursor. The DUF39-CBS and DUF39-ferredoxin architectures repeatedly occur together in the genomes of methanogenic Archaea, suggesting they may be of diverged function. This is consistent with a phylogenetic reconstruction of the DUF39 family, which clearly distinguishes the CBS-associated and ferredoxin-associated DUF39s.	0
CP026692.1\|AVH72065.1\|4107591_4108743_-\|protein-of-unknown-function-UPF0118	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.4463e-66
CP026692.1\|AVH72050.1\|4081895_4083167_+\|bilin-biosynthesis-protein-CpeY	gnl\|CDD\|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	6.10545e-08
CP026692.1\|AVH72054.1\|4087731_4089282_+\|metallophosphoesterase	gnl\|CDD\|277324	cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	0.000291262
CP026692.1\|AVH72069.1\|4112744_4114508_-\|WD40-repeat-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	4.86286e-82
CP026692.1\|AVH72056.1\|4090564_4090999_-\|CAAD-domain-protein	gnl\|CDD\|372936	pfam14159, CAAD, CAAD domains of cyanobacterial aminoacyl-tRNA synthetase. This domain is present in aminoacyl-tRNA synthetases (aaRSs), enzymes that couple tRNAs to their cognate amino acids. aaRSs from cyanobacteria containing the CAAD (for cyanobacterial aminoacyl-tRNA synthetases appended domain) protein domains are localized in the thylakoid membrane. The domain bears two putative transmembrane helices and is present in glutamyl-, isoleucyl-, leucyl-, and valyl-tRNA synthetases, the latter of which has probably recruited the domain more than once during evolution.	5.3582e-38
CP026692.1\|AVH72053.1\|4086631_4087603_+\|lipid-kinase	gnl\|CDD\|234850	PRK00861, PRK00861, putative lipid kinase; Reviewed.	0
CP026692.1\|AVH72061.1\|4102639_4103260_+\|integral-membrane-protein	gnl\|CDD\|225030	COG2119, COG2119, Predicted membrane protein [Function unknown].	1.77366e-53

>CP026692.1|AVH72059.1|4093696_4096819_+|hypothetical-protein
MFQGVLIIWGWNWLPLGLAPITLAQEVLTPEEASVVFSGPKLLMALLAGVLMAFAFQLLLTNFSVAVGISSWEIDSDSDNESESLGKTIRKGQAKVGTWALITVSIALFIACFLAVKLSLIESAFLGAIIGVVIWSTYFSLVIWLGSSAVGSLIGSISNTVTSGFQTLMGTATAGIGANSAKKQLVSTVEDITAAVRREFTSGFDSEGIKNTLQSSLGSLQLPKLDIKEIRSQFDQLLKDTDLQSVANSDLLQNIDRQTFVDLISSRGDLSKEDINSIADQFEGAWQQALNRKNPTEQVINLLKSATPEELNSEQLGERLQELVTIGGGNGNGVIKQAIRYGLSAAAPAVLERVNLSNIDVDKITTQLQKLKEKIKDVDVDQITEQLQKFKKQASEQVSAKLPISLENAIKADVEEYILHSFPWHFNRITLVDEFKEVIYDVNADPTTVRRELEEINQEYFTNLLKERGDISEARVKEISEQMESDRLEVLETVKQAQTREKGQDFRSRIEDYLRSTGKDELNPEGIERDFGKLLDDPQAGFEDLSSRFGQFDRDTFVQLLSQRQDISEEEANNIVSQLERNRDNLLNRARELQEQAKAKADELRQRVEDYLRNTNKDELNPEAIKREFKVLLDDPQAGISLLRSRLSQFDRDTLVQLLSQRQDLSEEQVNQTLDQLEAVRDSILQVPQQAKEQYEKTTKAIAEYLRNTNLEELDPEGIRGDLEKLLDDPKAGALALRDRLSNVDRETLVKLVSQRGDLSQEQVNQIIDRAQDAIGDILRAPRRLAKRTTQQALDFEANLEKYLRNTNKEELNPEGIKRDLQLLLSSPRAGIGNLTDRASKFDRSTIVALLSQREDISEEEANRIVDQIDSVRSSIVEQFQQIQQRVQSVLDGVFAKVRNYLNSLNRSELNYEGIKQDFAKVFDDPQAGFEALRDRLSEFDRDTLVAVLSSREDISEADANRIINQIEAARDGVLQRAERIQKETQKRLKAIQKQTQKQAEETKKTVANAAWWIFGTAITSLCASVIAGAIAVTGITLPG
>CP026692.1|AVH72058.1|4091781_4093062_-|signal-transduction-histidine-kinase-LytS
MVVGVQKRAVGVFSHRRDVEHALHELKKVGFDMDRVSVITQDGDRDDIAGADVSDRVGDKSDDGAKVGAATGGALGGLAGLLVGLGTLAIPGIGPIMLAGAAATTLATTLAGAGIGAVAGSLLGALIGLGIPEERARVYDERVKQGHYLVIVDGTDAEILRAEAILNNQGVEEFGIYDHPDATNAATGYVTPAATAGYSGVAKRAIGVFSHRRDAEVAITELRDAGFSLNQISIIAKDTNGHGIGGVDVDRNVGTGNKADDGAKAGAATGGVLGGLTGLLVGLGTLAIPGIGPVIAGGAVATTLATTLTGGAIGAAAGSIVGALVGLGIPEDKARVYGDRFQRGDYLVILDGTEAEIHQAEVILKHRGIEEFAIYDATEISKYRPGSERVSDRDAAVVDPIRPNYSTETNKNDPSVVIVDRRDEVL
>CP026692.1|AVH72057.1|4091180_4091642_-|BON-domain-transport-associated-protein
MQKLTPFLISGLLIFGVAACDNASKTSESAPNNPNEAPQTPTAKTTQASQQDAQSEVRRNQANSDIRAREQRNNTTGGDTQRAKGDLASEVRSKLEVNIPKSQLTVNAADGGIVTVSGTVSNQQELAKIEKLAKQIKGVKSVVVKATVAAPKQ
>CP026692.1|AVH72056.1|4090564_4090999_-|CAAD-domain-protein
METEQQQRESIDASLSQTTLALEGTDTANLPKLPPAPEPESQWQQISRQISQFLEQLPQYLSDFFQDYKQPLITVGLILTAIVTARLVLALLAAINDIPLLSPLFELVGISYTSWFIFRYLLKASTRQQLADEIQLLKSQFVGE
>CP026692.1|AVH72055.1|4089814_4090222_-|hypothetical-protein
MANEAVKRDTDSSDRAEVDTYDRGIIPAETAARMEREGDKYKTLPTEEREADAPTDDQTDSESIRTTDGYTIDREGLSNNYAIEPEMYYEEPGDARQQAAEDREERIEELGEVNQDEEGKLTDRGDSRGRGPGII
>CP026692.1|AVH72054.1|4087731_4089282_+|metallophosphoesterase
MKLVSDPAIANKIRKMNQRVRWQDPLIVERNIDQTRLVLEDGQTDNSEFSFLVVGDSGSGAHRGHNPQRQVAELMLPHHKESRFMLHTGDVIYLVGSSEYYQQNFIQPYREFILGTEHRKQIAFDQMVFKLPILPVPGNHDYYNLPILLSLASLTTLPIRHLLRSRLDLDVGLHGSGTGEAYARAFLDYLKAFQLPGELASHLDQYYTAKTDTGRCLSYQPGHFTRLPNRYYTFRYGGIDFFALDSNTFNDPPPLPKTKEGDADRKLLEKRREDFEQEKLEIIENSSKLRPENPNEADQLDDFHAKVSQIEELIVDIDKQLATNKTTLTDTEQLEWLKQRLIESWNNDEVRGRVIYFHHPPYVTEATKWQQAQTLIVRDRLRGVLDAVAKEIGSLTQGRPLVNLVLNGHAHCLEHLETMDTGHADSHIHWIVCGGSGFSLRRQRMEGADLMEEKKLVARSHLFIGRNGQGFQKRRPYSGLRIDVKGDGQPKFIVRPLVAEWYQRQWHNRELEPLII
>CP026692.1|AVH72053.1|4086631_4087603_+|lipid-kinase
MNRSACLIFNPVAGQGDPDTELAEIRAILEPDIDLDIYFTTEEIDADQLAYQALERGVEAIIASGGDGTLSIAAAAVVGTDIPFGIISRGTANAFATALGIPDTIAGACETILQGATTHVDVAYCNDRPMVLLAGIGFEAETVELADRDAKNRFGMMAYVLAGIQQLRNLKNFDVEIETEDRIIKTSACAVTVANAAPPTSVLAQGPAGLIYDDGLLDLTIVASTNKAGAIAATFHLFQTASTGNAVDRDDIGFLRAKQFKITTNPPQKVVLDGEIVGKTPVEIKCVPAGLRIFVPLVEEVEPTEKLEGLPNLTIEMKDTAGE
>CP026692.1|AVH72052.1|4085128_4086121_-|hydroxymethylbilane-synthase/porphobilinogen-deaminase
MTSVVSSPPRTIRIGSRKSQLALVQTYWVQEQLKNCYPDITFEVHTMSTQGDKILDVALAKIGDKGLFTKELELGMLNQEIDFAVHSLKDLPTHLPEGLTLAAITERENPADALVVHEKHKDKQIDTLPEGAVIGTSSLRRLAQLRHHFPHFAFKDVRGNLITRLAKLDAGEYDALILAAAGLERLGMSDGCAGLHLRIHQILPAEISLHAVGQGALGIECRADDSELLSLLKAIEHPQTRDRCLAERSFLRSLEGGCQVPIGVNTEISGDNLTLTGIVASVDGQKFVKDTVTGIANNAEALGIELAELLRQQGAQEILSEIFAVIQRGS
>CP026692.1|AVH72051.1|4083551_4084994_-|glycogen/starch-synthase
MRILFVAAEAAPVAKVGGMGDVVGALPKVLREMGHDVRIFLPYYGFLPDKMEIPQEPIWWGDAMFQHFAVYESVLPGTDVPLYLFGHPAFMPRRIYSGDDEDWRFTLFANGAAEFAWNYWKPDIIHCHDWHTGMIPVWMHQDPDISTVFTIHNLAYQGPWRWYLEKITWCPWYMQGHNVMAAAVQFANQVNTVSPTYAEQIKTLTYGETLEGLLSFISGKLSGIINGIDTEVYNPENDKYIAQIFTADTLDKRKSNKIALQEELGLEVNSKAFFIGIVTRLVEQKGIDLILQILDRFLSYTDAQFVVLGTGDRYYETQMWQLASRFPGRMATYLLYNDALSRRIYAGTDAFLMPSRFEPCGISQMMALRYGSVPIVRRTGGLVDTVTHHDPENAAGTGYCFDRYEPLDLFTSMIRAWEGFRFKPQWQELQKRGMSQNFSWYQSAKQYVKLYRSIYGLPEEEEKTPEPELVLNEAVTSSKS
>CP026692.1|AVH72050.1|4081895_4083167_+|bilin-biosynthesis-protein-CpeY
MDKRFFKMFGLTEEEAIAIIDTPLEQLEDASDKYIAVSHLINFPTEQSIAALVRAIETSNPNELDHRIVRRKAVESLGRLQAQSALPVIRQCLKDDDIYTIENSVWAIGEIGTKDPEILEEVAQLLDKPGQIYRVIIHTLANADYQPSLERVLNFTQVEDEPTRSAAIATVCRFTGDYSQITEVMALLQSPSVNARRGCIQDLIDSHYYKAIPEIARCPVSLVFRLRALRMLLDVGVPSGEITFTEIQPYLEQVLYDRPNDLDLVHEYDATPVLDFVINELYETDFGRCYLATKTLLDIYAQEAPAALLATYSDKAYNDYGAHYHVMKLFGWLKYAPAYDLLVENLHNREPQFQKSRAACAIALGELGDSRAIPEIKICLNTPIWDLKYACLLALERLGDSSGREICAHDADWLIRAKATSTQ
>CP026692.1|AVH72060.1|4100615_4102301_+|dihydroxy-acid-dehydratase
MSENLRSQIVTQGVQRSPNRAMLRAVGFKDEDFNKAIVGIANGYSTITPCNMGINQLALVAEVGIKTAGAMPQMFGTITISDGISMGTEGMKYSLVSREVIADSIETACTGQSMDGVLAIGGCDKNMPGAMLAIARMNIPAIFVYGGTIKPGHYNGRDLTVVSSFEAVGQYSAGKIDEKELLEVENRACPGAGSCGGMFTANTMSSAFEALGMSLSYSSTMAAEDAEKADSTEKSAFVLVEAIRKQILPRQIITRKSIENAISVIMAVGGSTNAVLHFLAIARAADVELTIDDFETIRARVPVLCDLKPSGKYVATDLHKAGGIPQVMKMLLVHDLLHGDSLTISGQTIAEILADIPEEPSANQDVIRTWNNPMYAQGHLAILRGNLATEGAVAKITGVKKPVITGPARVFESEEASLDAILAGKIQAGDILIIRYEGPRGGPGMREMLAPTSAIIGAGLGDAVGLITDGRFSGGTYGMVVGHVAPEAAVGGTIALVEEGDSITIDAPARLLQLNVSEEELARRHANWQPPAPRYTKGVLAKYAKLVSSSSVGAVTDLDLF
>CP026692.1|AVH72061.1|4102639_4103260_+|integral-membrane-protein
MLTAFTAGLLLITVSELGDKTFFIAVILAMHHPRRLVFIGVTTALAAMTILSVIFGQAVSLLPKVYIHYAEIALFIAFGIKLLYDASKMSVAACDTEVVEEAEAAVKQADLQLPKQKTSLAIVIEAFVLTFMAEWGDRTQIATIALSAGNNPIGVTIGAILGHSLCAAIAVIGGKMIAGRISERQLTFIGGCLFLVFGVVAAIEGA
>CP026692.1|AVH72062.1|4103404_4104298_-|TPR-repeat-containing-protein
MSQPRNRWIVQVVLAVAILAFVGVSVIPIIGAFNNTPPSSQNTASTRGSLPSADQKSKLEDEVRGYEQVLQREPENQTALKGLLQARLQLLSQKDKSEVKPADIQVVIEPLEKLAKLNPEQSEYSVLLAQAKQQIGDREGAAQAYRSILSIKPGDLNALRGMVALLISQQRPEAAIGLLQETLSNAAQANTIQPGSVDIVAVQVLLGSVHASQKRYAQASSVYDQAIKKDPKDFRPVVAKAMLLKQQGKDADAKHLFDSAVALAPAEYKDGIKKAATASPTPNPVASPAPSPESQPK
>CP026692.1|AVH72063.1|4104676_4105702_+|hypothetical-protein
MNSDLMPLPESSNSSASNQGPTKVEAAANVHIAAQSSKEVENLPVNLSETDSNGNLINRQQPIPPPSEPMQYRAIGLVRGRYHASSEQFTQGTLLTADGVELNAVLLGRIMSLVKNHLDLEKEHLWVVYPRTRQENDTLHIQIVGVWEPENLAKNSTDEDESDFELQELQILDDGLSENSELSTTAPKPSSEVADGGFSVRGEVVYQSFDAKSLVVKIRQAPRKSTDKPKYFKLKLRGVLTTKAVGKFWDFQAKREADVLVVEKAEAIADLPKKRKPPFKGGPRAGIGGAGGRKPFPPRRTGETPRPIKKTSTGGDPSVVSKPIPRTPAPKPIKRPKPTQE
>CP026692.1|AVH72064.1|4105823_4106993_-|protein-of-unknown-function-DUF39
MRTIAEINEKIKRQRAVVLTTEELKARVVEIGVTKAAKEVDVITTGTFEPMESSGAIINLGHTDPPIKIRRCWLDGVPAYSGFGAVDLYLGASCAVETTDGEEVRERGGGHVIEDLIAGKSIHVKAQGQVTDCYPRANFETTITSDTINQFYLFNPRNLYQNFIVGVNGGDRPLFTYLGPLQPRLGNAVYSNPGAISPLLNDPDLQLVGIGTRIFLGGGVGYVAWEGTQHFPLQKRLANRTPIGPSATLALIGDAKQMDAHWVRGCYFKSYGPSLMLGVGVPLPVLNEQVIEHCAVQDRDLVAPIVDFSIPRRVRPTFGLVSYAQLKSGRITIEGKAVRSAPLASLFFSRQVALELKKWIEAGTFTLTEPVSSIPMERSFLPQDRRTDF
>CP026692.1|AVH72065.1|4107591_4108743_-|protein-of-unknown-function-UPF0118
MNLGQWIGLIAIVLSLYILWQIREVLLLMFAAVVLATTLNRLAKRFQRFGMRRGFAVLLAVAIFFAGVVGFFWLIVPPFAQQFQELTYQVPKGFGRFNSWLDALRTRIPDQLIPYIPDINSLIQQVQPFANRLLGNSFAFVSGSLEVVLKILLVLVLTGMMLADPVAYRKVFVRLFPSFYRRRVDGILDKCEVSLEGWITGAFIAIFVVGLMSLIGLSILHVKAALALAVLAGFFNLIPNLGPTMSVIPAMAIAFLDEPWKAIAVLILYFIIQQVESNFITPVVMAHQVSLLPAITLIAQLFFVTFFGFLGLFLALPLTVVAKIWLQEVLIKDVLDEWGNNNRKETEFVIVSKSPGTDDNWTAENLDINENPSIDDDILKKSD
>CP026692.1|AVH72066.1|4108833_4109025_-|hypothetical-protein
MENQLGLILKLLLLSALLSVLIKYAGPSLPIPATASNALIIVLLPIAIIAIALLWRFQAQKQN
>CP026692.1|AVH72067.1|4109309_4110302_-|family-8-glycosyltransferase
MFISQRGIITYAYGASYYLEMAKSLARSLRLHSPNVPRAIVTDNENDQDLLEFYDYVINIKYEYGYNVKQKLHIYDYSPFKYTLSLDSDCIAVRDINFIFDDFKGRSFSVAGNVYLQAGDKDKFIDVDDTLKRFNLTKLPRFNGGLYYFEKNDTAKAFFETALELARDWKKLGISEFRGDGPNDERILGLAMMLHNQSMFEDHGQMMRTPIGLRGSFNIDAITGQSTFQKYNQVVSPALVHFACVWGEHPVYHREVSKLKNLDKGSANQVKSNIFSAIKYKFGYQIAFLRYIAKRVPKNSKYIQARVKKLLIELPELIKAKYRIEPVRSK
>CP026692.1|AVH72068.1|4111326_4111758_-|hypothetical-protein
MLDINKRTLISDLSCIDDEQLFAQLTPEEGAVIEGGGGFLIIDQLQAINADADTFGDDDTYITVNGSKLWGSGGFSTGQTSGVNRGLGVDFPARVELFDEDGGLNGSDDSLGGFIVNGSTNGTTAITRVSGSGSIYDVYYRVF
>CP026692.1|AVH72069.1|4112744_4114508_-|WD40-repeat-containing-protein
MDWISLLKAQQTDFLQRVKKPKTYDLSLLESQVKGCHTEIMAFWGEPLAKLQELSRQQAEVLAKNPPPIPPEYPEPPDWTIPFPKYFQQQAQDYLLREKIVDLVIAERLGKLVKKVSCDTLQNMILDDEGNLCGESKFSYVLKDNPQLSVQVYVADGESFNGIKKDKIKWSVTQEDLKNHQVLIFLCLFYPSTGQLGNERQSIITGFLPANQIELTEPKLYISPSNLLYGGGLSWYLESLLGKKDTSPVINEQAIADTIQTLPSEHCLKGIVGDWECWQTLQGHNRGINCLAFSSGCKNGKALPILASGSRGETKLWDLSKGELIETLSEYPWVISGLVDEVNSLAFSSDGQTLVSCGADSTIKLWHVGALDLIDILHKHNGVVRCAAFTPDGRMLATGGDDRKILFWDLMQRQVAIALSLDDTAAHSLVLSRDGETLVTGSYRKIKVWRTLPKTGIKSLKDAQPLHTLMGHSHIVRSLAISTDGKILVSGSWDQTIKIWQLETGELLHTLKGHRDRVYAIALSPNGQIIASGSADKTIKLWHLQTGELLATFTGHGNIVTALAFTPSGEMLVSGSLDKTIKIWQRS

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Crispr_ID: CP026692_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_22

4562063-4562169

Orphan

Consensus_repeat	Method
ATAAAACCTTCCCTGGCAGGTTCGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026692_22

>merge|CP026692|22|4562063-4562169|CRISPRCasFinder
ATAAAACCTTCCCTGGCAGGTTCGTAAACTATTGATTTGACCTATCATGAGTGATATTATTTTGACGAGCTAGAAAATATGAATAAAACCTTCCCTGGCAGGTTCGT

>CP026692|22|21|4562063-4562169|CRISPRCasFinder
ATAAAACCTTCCCTGGCAGGTTCGT	AAACTATTGATTTGACCTATCATGAGTGATATTATTTTGACGAGCTAGAAAATATGA
ATAAAACCTTCCCTGGCAGGTTCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH72395.1\|4549228_4550128_-\|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl\|CDD\|223654
CP026692.1\|AVH72414.1\|4571568_4572144_+\|adenosylcobinamide-kinase	unknown	unknown	gnl\|CDD\|235612
CP026692.1\|AVH72413.1\|4570369_4571179_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH72404.1\|4559691_4561962_+\|guanosine-3'-5'-bis(diphosphate)-3'--pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
CP026692.1\|AVH72406.1\|4563457_4564174_+\|SAM-dependent-methlyltransferase	unknown	unknown	gnl\|CDD\|379312
CP026692.1\|AVH72399.1\|4553678_4554932_-\|exodeoxyribonuclease-I-subunit-D	unknown	unknown	gnl\|CDD\|223497
CP026692.1\|AVH72400.1\|4555007_4555895_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|131112
CP026692.1\|AVH72411.1\|4568211_4569168_-\|family-2-glycosyltransferase	unknown	unknown	gnl\|CDD\|133005
CP026692.1\|AVH72401.1\|4556446_4558036_-\|EmrB/QacA-subfamily-drug-resistance-transporter	unknown	unknown	gnl\|CDD\|129794
CP026692.1\|AVH72405.1\|4562210_4563209_+\|nodulation-protein-NodZ	unknown	unknown	gnl\|CDD\|211389
CP026692.1\|AVH72408.1\|4566007_4566307_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH72403.1\|4559011_4559365_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH72410.1\|4567627_4568209_-\|colanic-acid-biosynthesis-acetyltransferase-WcaF	unknown	unknown	gnl\|CDD\|236703
CP026692.1\|AVH72407.1\|4564589_4565669_+\|peptidase-M4	unknown	unknown	gnl\|CDD\|225768
CP026692.1\|AVH72397.1\|4552688_4552904_-\|protein-of-unknown-function-UPF0150	unknown	unknown	gnl\|CDD\|224514
CP026692.1\|AVH72412.1\|4569192_4570125_-\|family-2-glycosyltransferase	unknown	unknown	gnl\|CDD\|132997
CP026692.1\|AVH72396.1\|4550838_4551996_-\|sulfate/thiosulfate-binding-protein	unknown	unknown	gnl\|CDD\|224529
CP026692.1\|AVH72398.1\|4553006_4553636_-\|type-I-restriction-endonuclease-subunit-R	unknown	unknown	unknown
CP026692.1\|AVH72402.1\|4558267_4558909_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379883
CP026692.1\|AVH72409.1\|4566426_4566903_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH72395.1\|4549228_4550128_-\|phosphate-ABC-transporter-permease-PstA	gnl\|CDD\|223654	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	4.60729e-81
CP026692.1\|AVH72404.1\|4559691_4561962_+\|guanosine-3'-5'-bis(diphosphate)-3'--pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
CP026692.1\|AVH72399.1\|4553678_4554932_-\|exodeoxyribonuclease-I-subunit-D	gnl\|CDD\|223497	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair].	2.89383e-80
CP026692.1\|AVH72406.1\|4563457_4564174_+\|SAM-dependent-methlyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.31188e-20
CP026692.1\|AVH72396.1\|4550838_4551996_-\|sulfate/thiosulfate-binding-protein	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	2.35643e-138
CP026692.1\|AVH72411.1\|4568211_4569168_-\|family-2-glycosyltransferase	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	4.37693e-80
CP026692.1\|AVH72401.1\|4556446_4558036_-\|EmrB/QacA-subfamily-drug-resistance-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	3.03532e-119
CP026692.1\|AVH72405.1\|4562210_4563209_+\|nodulation-protein-NodZ	gnl\|CDD\|211389	cd11548, NodZ_like, Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.	1.4754e-47
CP026692.1\|AVH72410.1\|4567627_4568209_-\|colanic-acid-biosynthesis-acetyltransferase-WcaF	gnl\|CDD\|236703	PRK10502, PRK10502, putative acyl transferase; Provisional.	8.54458e-118
CP026692.1\|AVH72412.1\|4569192_4570125_-\|family-2-glycosyltransferase	gnl\|CDD\|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	7.64698e-31
CP026692.1\|AVH72407.1\|4564589_4565669_+\|peptidase-M4	gnl\|CDD\|225768	COG3227, LasB, Zinc metalloprotease (elastase) [Amino acid transport and metabolism].	7.65055e-143
CP026692.1\|AVH72397.1\|4552688_4552904_-\|protein-of-unknown-function-UPF0150	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	4.19514e-18
CP026692.1\|AVH72414.1\|4571568_4572144_+\|adenosylcobinamide-kinase	gnl\|CDD\|235612	PRK05800, cobU, adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Validated.	9.83709e-87
CP026692.1\|AVH72400.1\|4555007_4555895_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|131112	TIGR02057, Phosphoadenosine_phosphosulfate_reductase, phosphoadenosine phosphosulfate reductase, thioredoxin dependent. Requiring thioredoxin as an electron donor, phosphoadenosine phosphosulfate reductase catalyzes the reduction of 3'-phosphoadenylylsulfate (PAPS) to sulfite and phospho-adenosine-phosphate (PAP). Found in enterobacteria, cyanobacteria, and yeast, PAPS reductase is related to a group of plant (TIGR00424) and bacterial (TIGR02055) enzymes preferring 5'-adenylylsulfate (APS) over PAPS as a substrate for reduction to sulfite. [Central intermediary metabolism, Sulfur metabolism].	1.19031e-125
CP026692.1\|AVH72402.1\|4558267_4558909_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|379883	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. Another target protein is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	5.32471e-25

>CP026692.1|AVH72404.1|4559691_4561962_+|guanosine-3'-5'-bis(diphosphate)-3'--pyrophosphohydrolase
MSSIAINSSVDLAIPEWLKKCLKESSTSSGAGEDDKKHNDAVLIGRAFEFAYQLHEGQYRKSGEPYIAHPIAVAELLRDLGGSAAMIAAGFLHDVVEDTEVTSQDIEERFGAEVRQLVEGVTKLSKINFTSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQYMSEASRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKYLEPEAYRQMQEHVSEKRTAREEKLARATNMLEERLQQAGIHFQEISGRPKHLYSIYQKMHRQQKEFHEIYDLAALRIIVQTNQDCYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGLTGRPLEVQIRTIEMHHIAEYGIAAHWKYKETGGSSISHLTGTDDKFTWLRQLLEWQTDLKDAQEYLDSVKDNLFEDDVYVFTPKGDVVPLSPGATTVDFAYRIHTEVGNHCSGARVNGRMVPLSTRLQNGDIVEVLTQKNCHPSLDWLNFVRTSAAKYRIKQWYKRSRREENVARGRELLEKELGKTGFDSLLKSDAMETVAQKCNYHSVDDLLAGLGYGEVTLNLVLNRWREVAKGQQPVSTVSPFIPKEPATSKALRDAPPTTSRSTDSPIFGVEGLVYYLAGCCAPIPGEPIIGVVTRGRGISIHRQGCHNLETVEYERLVPVRWNPSAENSGRPHTYPVDVQIEALDRVGVLKDILSRLSDQGINVRHAQVKTSVGQPALIDLGIDIRDRSQLEQVFVQIKKMSDILNIRRVGQIDE
>CP026692.1|AVH72403.1|4559011_4559365_-|hypothetical-protein
MSLNCEKYLAFVTLLEQLRSDATTTQIAAPELRQRVATLQQFFGQQIVPLADENWRVQSYQTEMSKQLRLLAIDVMFLQGARQASTVQTRLQTISDRLTTLIQYCSAILQPEAEGEK
>CP026692.1|AVH72402.1|4558267_4558909_+|TetR-family-transcriptional-regulator
MEQMAKKILLGDDIFMSKQINITSGRPRSIHADQAILQATLDLLAEVGYESMSIEAIASRAGVGKTTIYRRYTSKEELVADAIESLRDDLAIPDTSSFWGDMDLLINNAAKKIDSPLGRQTLALIISTASSNPQFAQVYWTKYTKLRREAFSKVLERAKFRGEIHKDADVDLIIDLVSGSLYYALIFKPTTEPVEAYMRRTMNLLLKGIGHGK
>CP026692.1|AVH72401.1|4556446_4558036_-|EmrB/QacA-subfamily-drug-resistance-transporter
MATNIKGSSFDEFGYVHGPLKWAIAFTASLGAILEVIDTSIVNVALTDIQASLGATVSEVGWVVTGYGIANVVLIPLSAWLGDYFGRKTYFIFSLIGFTLASVLCGLAFNLPMLVFSRILQGLCGGGLLAKAQAILFETFPPAEQGLAQAVFGVGVIAGPAIGPTLGGFLVDGLGWRWIFFVNIPFGIVAVTMSFMFLPKDKDKSKTKSQTVDWFGIGFLVIAIGCMQTLLEEGEQDDWFSSGFITTLAIASIIGLGLFIWRELKTDHPAVDLRVLRHRSLAAGSVLSAVVGMGLYGTLFAVPIFAQSVLHFTATQTGLLLAPGALASAIVMVLLGKLSSKIDARFLIAIGAVGLSGVMFQLAAITPQTGIDDLFWPLVWRGAVTVLMFLPLSLAVLGPLPKQDISAGSGFYNLTRQLGGSIGIALLTTLLDRREAFHRAILVAKLSPYDPETSQRLDFLNGALQSQGMDATTAQQQALALLSQTVDIQAAVLSYADCFRVVGIGFLCSLPLLLFLGKGGAGAKAPVGH
>CP026692.1|AVH72400.1|4555007_4555895_-|phosphoadenosine-phosphosulfate-reductase
MPRSKNGYFYCLIPHAQNVVISAHNNYLISERNRRLNGVRSILIKVKIFEQKIIMTVSTASRNQAIAFDLEKLNEQFETATPKEILAWSIENIPTELVQTSAFNVDDMIITHILYSELKHPVPVIFLDTLHHFPESLELVAKAIQIYNLDLQTFKTPDVDTREAFEAKYGDKLWDKDIAQFHHITKIEPLLRGLDELNSVAWITGRRRDQAVTRANMPIFELDGKGRLKVNPIATWTRQDSWVYVAEHGVIYNPLHDQGYPSIGDQPITTKVGEGEDERAGRWRGSEKTECGIHI
>CP026692.1|AVH72399.1|4553678_4554932_-|exodeoxyribonuclease-I-subunit-D
MIKILHLSDIHMGSGFSHGRINPATGLNTRLEDFVNTLSICIDRALTDTVDMVIFGGDAFPDATPPPYVQQAFASQFRRLMDANIPTVLLVGNHDQHSQGQGGASLNIYRTLGVPGFVVGDALTTHCIQTRNGKVQVITLPWLTRSTLMTRQETEGLSLAEVNQLLTERLRVVIEGEIRRLDPDVPTILLAHLMADNATLGAERFLAVGKGFTLPLSLLTRPCFDYVALGHVHRHQNLNKSNNPPVIYPGSIERVDFSEEKEDKGYVMLELERGRAEWEFCPLTVRTFRTIEVDVSKADDPQAVLMKAIAKYNIQDAVVRLIYKLRSEQMDLIDSSSLHTALSPAHTYTIQAELLSQLARPRIPELSASSSIDPMEALKTYLNNREDLKDIATSMMDAAQKLLADEVEVWLETATNE
>CP026692.1|AVH72398.1|4553006_4553636_-|type-I-restriction-endonuclease-subunit-R
MTQTIQAKVIDLRYLIDNFGIELVLDGSFFREWQEDLPEISDLDKQLLDKVKTGYFNLLNYPPLLEDVVRMAFIDPLLFIGDFYLAPFYVKSEESIDIAVPDEDVIIKGRIDTLVLKEQFWVMIIESKRASFSVEQGLAQILAYMLGNPYTDKPSFGMIATGSEFIFVKLVKRNPPRYALSKGLLMRNPGNELYDVLRILKRLTQLVSA
>CP026692.1|AVH72397.1|4552688_4552904_-|protein-of-unknown-function-UPF0150
MKREFNVIIERDADGYFVASVPNLPGCHTQAQTLDELMERIREAIELCLEFDEEQQDSLDFVGIQRVAVEI
>CP026692.1|AVH72396.1|4550838_4551996_-|sulfate/thiosulfate-binding-protein
MSKSQQPTQLSKFLSEGMQAYVMKALQNIQLSYQHAIISWLNGRTVKSFVSLFLISIFFSLAVASCSGSSSASKNDVKLKLVSFSVTKAAHDQIIPKFVQKWKQEHNQNVTFEQSYGGSGAQAAAVIAGSQEADIVHLALPLDVNKIQQAGLIKTGWEIKSPRSGIVSRSVAAIVTREGNPKGINTWADLAKDGVTLIAANPKTSGIAIWEFLAFWGSVSLTGGDEATALDYVTKVYKNTPILTKDAREASDLFFQKGQGDVLINYENEVILAGKNGTKLPYVVPQVNISIDNPVAVVDKNIDKHGTREVAQAFVDFLYSTEAQREFAKLQYRPVNPSVTQEVASQHPPIKTLFTSQDLGGWDIIQKKFFGDGAIFDKVQAAKKA
>CP026692.1|AVH72395.1|4549228_4550128_-|phosphate-ABC-transporter-permease-PstA
MATSYQQDDSLDSAAEFTDNVESRETLGKVFEVLFLLGLLIGLFILALLLFDIFRDGLGRFLSPGFLTETPSRFPDQGGIRPAIISSVLLGSVVILVTVPIGVGAALYLEEYAPKAWWTAIIEINISNLAGVPSIVYGLLGLGVFNYLLGFGPALISGALTLSLLSLPVIIVTAREAIRAVPDSLRNASYGLGVTKWRTISNHVIPYAVPGILTGVIISVSRAIGDAASLIVVGAVGFLTFNPGLFQRFMALPIQIYSYITRPEPGFASAAAATIIALLVLILLLNGVAIYIRQRFSIR
>CP026692.1|AVH72405.1|4562210_4563209_+|nodulation-protein-NodZ
MVSEKFLVVKGKAGMGNRFLSLLDSILYAQLTNRKIIVDWSDEVYSNNRSNVFPDFFNLDHVTQASEIPSTQSVYPSFWKNSLDKSVNEVLLSYESPDDLRYNNPKIWSKYTTNMSRIDYSEDILIRWSYVTETYKLRRYFLGDFAYLQRLSNETILKKIIRENLSLQPNIETIIKKTVDNSFEDIVIGVHVRYTDRKTSKNLYLKFVDKILEKHPKSLIFLATDNPAVEDFFRDKYTNILVTDKWYPASGSSLHQNPECPDRFENGVQALIDIYLLSKCNYLIYNKTSTFGVVAKLISDIPEANTIDTSQYSLKGKVKNLIAWVREKTVLS
>CP026692.1|AVH72406.1|4563457_4564174_+|SAM-dependent-methlyltransferase
MQQLFPGEVFANTADFDTGIRQLLPRYDEMLEVITRCLTSTSRRILELGCGTGELSLKILNRFPDAQVIALDYSPRMLQFAQDKITAVGYQQRWTGIQADFGDWANNPEKLDIDSEFDACVSSLAIHHLQDEMKLKLFERIAASLPQDGCFWNADPTLPESPALAEVYKVAREEWAVEQGINLTEIRAKRGTGSTQGYSSQDQLASLETHLQMLSKAGFKTVAVPWKYYGLAVFGGCL
>CP026692.1|AVH72407.1|4564589_4565669_+|peptidase-M4
MARNKKKSAGFKHEQSPYSRCPICCIIPPHILKNVVVNGNPQQRTWAFHTLNISAQFQGRRNVVGNISFAPSPGEKRRTIYDAKNGQQLPGTLVRSEGGPPSSDPAVNEAYDAAGATYDLFHEIFDRNSIDDKGLRLDSTVHYGVKYDNAFWNGDQMVYGDGDEELFQRFTKSIDVIGHELTHGVTQYQAGLQYYGEPGALNESFSDVFGSLVKQKIKNQTAQEADWLIGEGLLVPTVKGVGLRSMKAPGTAYDDRVLGKDPQPAHVKDKYTGTDDNGGVHINSGIPNYAFYLAAVEIGGYAWEKAGKIWYIALRDRLRAKADFKKAASVTIQVAGELYGNDSNEQKAVQNAWQKVGVI
>CP026692.1|AVH72408.1|4566007_4566307_+|hypothetical-protein
MRISFERTGGFAGITKKTTVDTDTLPPNEASTLPRLVEAADLFRLPELITSPNPQSDRFQYKLTVEDNGKQHTVTVSESALPGTLRPLIEWLQIIAQKR
>CP026692.1|AVH72409.1|4566426_4566903_-|hypothetical-protein
MNKLLDETLSIKIAEQINSRASTPFDNAYKAALSTEGARYIQGFLAFAGKPYRPIEHSWIELDDASDVRIIDPTLPHLNKNPQEIWYFAAHSLTVKKLKAIIEESKEDYPEDDPLPIYGDPPYEYYGDVMLGGQDYLTAYQAAEVKCREINELNPESN
>CP026692.1|AVH72410.1|4567627_4568209_-|colanic-acid-biosynthesis-acetyltransferase-WcaF
MTNDQPFVDLRKYDQSWFDRGRPSWYVLLWWFVQAIAFPLTPQPLNILRCALLRLFGARIGKGVLIRPTARFTYPWKVTIGNYSWIGDNVVLYSLDQIDIGEHCVVSQKSYLCTGTHDLQDPAFGLKTASITIDNGAWVAADCFVGPGVQIGANAVIGARSSVFTNMPSGQVCWGSPCRPKTARIKLDPSTTP
>CP026692.1|AVH72411.1|4568211_4569168_-|family-2-glycosyltransferase
MSSKIPVSVLIPAKNEQANLPACLASLSRADEIFVVDSQSTDNSIEIAKSHGVNVVQFNFNGRWPKKKNWSLDNLPFRNEWVLIVDCDERITPELWEEIDQVIQNHEYTGYYLNRRVFFLGKWIRYGGKYPDWNLRLFQHTKGRYENLNTEDIPNTGDNEVHEHVILQGKVGYLKNDMLHEDFRDLYHWLERHNRYSNWEARVYFNILTGKDDSGTIGANLFGDAVQRKRFLKKVWVRLPFKPILRFVLFYIIQRGFLDGKAGYIYARLLSQYEYQIGVKLYELRNCGGHLNTATIPKDGAEEQGSREAEAKLLTIDS
>CP026692.1|AVH72412.1|4569192_4570125_-|family-2-glycosyltransferase
MPDIQISAIICTHNRDTYLGAAIDSLLAQDFAADFEIVIVDNGSSDRTREVVEQKTYNPRLKYVFEPTIGLSVARNTGAKVASGDILAYLDDDAVASKGWLQVLYSAYYNNSKLAIAGGKVTLLWPPGIQQPRWLSPGLAANLGAYDLGDSNIYIEQPGSTPRGLNYSIRRSFLEEIGGFDPHLGRVGKNLLSNEELQMTEFALQRGWQVAYLPEALVAHNVAPERLQRSWFLNRGWWQGISECYREQLAGKAGIAQLQRGSERFLRGLYKALQYFSDPAERFDKLVYAYGQIGYLNAAIQGLLSTSNKK
>CP026692.1|AVH72413.1|4570369_4571179_-|hypothetical-protein
MNAGLKRIEATLHDLGNRGTASTAETGDSTTKRPFSFRISVGANEPTESTQIPSSQDEKLVELGKETESDYSSEQNFFPHHDSVQTFQAEENGSKTPSLPKLKTPSFSSHRHGANPALAMNLLQEIQETVADWQTELQNILKQIQDIYLEGPIVNGWLESNPTEPEAGGTATLRHAEVDRLMNYVEEICATGGKVSYQSSITGYRLCGVDDTGKVWSRPCPPDQVPNVSMAIARYQKLRQLLGRKQSLETRLSQLAQTLVVLHSHIQQT
>CP026692.1|AVH72414.1|4571568_4572144_+|adenosylcobinamide-kinase
MGKIILVTGPARSGKSEWAETLAMQSGKAVVYVATATDNLDDQEWHQRILEHQQRRPQDWVTLSVPVELSATLADAKPYTCLLVDSLGTWVANLLEQDKSSWENTLAELLETVELVAADMLFVAEEVGWGVIPAYPLGRMFRDRLGSLVRQLATLSETVYLVTGGHVLNLSILGSPLPNSGDAGTFRSQDS

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Crispr_ID: CP026692_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_23

4702744-4702841

Orphan

Consensus_repeat	Method
ACTCTACTGCTTTCTAAAAAATTAGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026692_23

>merge|CP026692|23|4702744-4702841|CRISPRCasFinder
ACTCTACTGCTTTCTAAAAAATTAGCCAAGGATTATAAAGAGTTTGTTACTCTTATCCATGTCGCTAACCCACTCTACTGCTTTCTAAAAAATTAGCC

>CP026692|23|22|4702744-4702841|CRISPRCasFinder
ACTCTACTGCTTTCTAAAAAATTAGCC	AAGGATTATAAAGAGTTTGTTACTCTTATCCATGTCGCTAACCC
ACTCTACTGCTTTCTAAAAAATTAGCC

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH72499.1\|4690241_4691015_-\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|379325
CP026692.1\|AVH72506.1\|4699541_4701509_+\|PAS-sensor-containing-diguanylate-cyclase/phosphodiesterase	unknown	unknown	gnl\|CDD\|238923
CP026692.1\|AVH72514.1\|4711547_4712390_+\|TPR-repeat-containing-protein	unknown	unknown	gnl\|CDD\|276809
CP026692.1\|AVH72505.1\|4697567_4699364_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
CP026692.1\|AVH72507.1\|4701837_4702173_+\|protein-of-unknown-function-DUF433	unknown	unknown	gnl\|CDD\|377269
CP026692.1\|AVH72517.1\|4715050_4715659_+\|peptidase-M50	unknown	unknown	gnl\|CDD\|100079
CP026692.1\|AVH72500.1\|4691232_4692414_+\|methyltransferase	unknown	unknown	gnl\|CDD\|379312
CP026692.1\|AVH72518.1\|4715696_4716221_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH72515.1\|4712525_4714094_-\|actetate-permease	unknown	unknown	gnl\|CDD\|236495
CP026692.1\|AVH72516.1\|4714246_4714522_-\|protein-of-unknown-function-DUF485	unknown	unknown	gnl\|CDD\|377315
CP026692.1\|AVH72503.1\|4695223_4695679_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH72509.1\|4702930_4703926_-\|photosystem-reaction-center-subunit-H	unknown	unknown	gnl\|CDD\|368352
CP026692.1\|AVH72510.1\|4704125_4707758_-\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|274009
CP026692.1\|AVH72504.1\|4696004_4697462_+\|UPF0061-family-protein-YdiU	unknown	unknown	gnl\|CDD\|367144
CP026692.1\|AVH72502.1\|4694135_4694711_+\|alanine-acetyltransferase	unknown	unknown	gnl\|CDD\|182749
CP026692.1\|AVH72508.1\|4702172_4702538_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375906
CP026692.1\|AVH72512.1\|4709385_4709844_-\|BON-domain-transport-associated-protein	unknown	unknown	gnl\|CDD\|335963
CP026692.1\|AVH72501.1\|4692739_4693747_-\|biotin-synthase	unknown	unknown	gnl\|CDD\|215219
CP026692.1\|AVH72511.1\|4708418_4709240_+\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|238449
CP026692.1\|AVH72513.1\|4710310_4711231_+\|3'-5'-exonuclease/ribonuclease-D	unknown	unknown	gnl\|CDD\|223426

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH72499.1\|4690241_4691015_-\|serine/threonine-protein-phosphatase	gnl\|CDD\|379325	pfam13672, PP2C_2, Protein phosphatase 2C. Protein phosphatase 2C is a Mn++ or Mg++ dependent protein serine/threonine phosphatase.	4.0623e-72
CP026692.1\|AVH72506.1\|4699541_4701509_+\|PAS-sensor-containing-diguanylate-cyclase/phosphodiesterase	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	4.36446e-102
CP026692.1\|AVH72514.1\|4711547_4712390_+\|TPR-repeat-containing-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.51642e-24
CP026692.1\|AVH72505.1\|4697567_4699364_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	6.17647e-179
CP026692.1\|AVH72507.1\|4701837_4702173_+\|protein-of-unknown-function-DUF433	gnl\|CDD\|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	3.40279e-05
CP026692.1\|AVH72517.1\|4715050_4715659_+\|peptidase-M50	gnl\|CDD\|100079	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with a minimal core protein and no PDZ domains.	3.49112e-40
CP026692.1\|AVH72500.1\|4691232_4692414_+\|methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	7.14961e-23
CP026692.1\|AVH72515.1\|4712525_4714094_-\|actetate-permease	gnl\|CDD\|236495	PRK09395, actP, cation/acetate symporter ActP.	0
CP026692.1\|AVH72516.1\|4714246_4714522_-\|protein-of-unknown-function-DUF485	gnl\|CDD\|377315	pfam04341, DUF485, Protein of unknown function, DUF485. This family includes several putative integral membrane proteins.	1.74939e-22
CP026692.1\|AVH72511.1\|4708418_4709240_+\|carbonic-anhydrase	gnl\|CDD\|238449	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	3.80984e-96
CP026692.1\|AVH72509.1\|4702930_4703926_-\|photosystem-reaction-center-subunit-H	gnl\|CDD\|368352	pfam05239, PRC, PRC-barrel domain. The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain.	0.000527071
CP026692.1\|AVH72510.1\|4704125_4707758_-\|chromosome-segregation-protein-SMC	gnl\|CDD\|274009	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0
CP026692.1\|AVH72504.1\|4696004_4697462_+\|UPF0061-family-protein-YdiU	gnl\|CDD\|367144	pfam02696, UPF0061, Uncharacterized ACR, YdiU/UPF0061 family.	0
CP026692.1\|AVH72502.1\|4694135_4694711_+\|alanine-acetyltransferase	gnl\|CDD\|182749	PRK10809, PRK10809, 30S ribosomal protein S5 alanine N-acetyltransferase.	1.86831e-58
CP026692.1\|AVH72508.1\|4702172_4702538_+\|hypothetical-protein	gnl\|CDD\|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	8.87294e-07
CP026692.1\|AVH72512.1\|4709385_4709844_-\|BON-domain-transport-associated-protein	gnl\|CDD\|335963	pfam04972, BON, BON domain. This domain is found in a family of osmotic shock protection proteins. It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes.	3.39768e-06
CP026692.1\|AVH72501.1\|4692739_4693747_-\|biotin-synthase	gnl\|CDD\|215219	PLN02389, PLN02389, biotin synthase.	3.05702e-169
CP026692.1\|AVH72513.1\|4710310_4711231_+\|3'-5'-exonuclease/ribonuclease-D	gnl\|CDD\|223426	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis].	1.61882e-47

>CP026692.1|AVH72508.1|4702172_4702538_+|hypothetical-protein
MAIRYLLDEHLNPTYRSQLVRRNPELIVRIIGDLDVPPKGTPDPEILIWCETNEFILVTNNRKSMPRHLADHLASGCHIPGIFTIDANQSIGQTVEELIIIVEASFDDEYQDRIEYLPLSR
>CP026692.1|AVH72507.1|4701837_4702173_+|protein-of-unknown-function-DUF433
MKLEEYFNALAPDDIRLKGTRIGIESILYEYIYRCKTPEEIAEQFHTVTLEQVYATILYYLHHRSEVDAYLVDWLEFSRTMREEQQLNPSPARMRFRRIQEENAPKQLQES
>CP026692.1|AVH72506.1|4699541_4701509_+|PAS-sensor-containing-diguanylate-cyclase/phosphodiesterase
MDVDEFSQQIEELRSRVRGIWQRTATQPNSQQGLIIEAFDELQIAVEELLAASEELYTTRAAVERECQRYQELFNFAPDAYLVTDTAGKILEANNAAVTMFSVHLKYLVGKPLILFIAQQDRQFFHSQINNSQQIQDWVIDLKPRFSKPFPASIRASPVYDSQEKLVGWRWLLRNISEAKQAEERMAKRTEELAKANQQLLSEITERKRAESQLLHLALHDVLTGLPNRALFMNRLKDAVNYSKRHSDYLFAVLFLDLDRFKLINDSLGHAVGDQLLLTVAQRLQECLRSTDIAGRLGGDEFIILLVGIKDVVEVLAVVERIQNKLALPVILGGQKVSTTASIGITLSITGYKEPEDLLRDADIAMYRAKTQGRGCYQIFNTDMHIQAIAHLELVNELRRAIELQEFQVYYQPIVSLSSGRITGFEALVRWLHPKHGIVLPEYFMSIAQETRLIILIEQWVLYEACGQIQQWQKQLSSSCGDLPESPLTISINLCSNRFSEENLLPHINKVLQDTGLDAPSLTLEITESVIMENNDKAIIRLKELRNLGIKLAIDDFGTGYSSLGRLHHFPINQLKIDRSFVSGDIIDDGNLDIVETIITLAHKLGVDVTAEGVETEEQLGMLKKLNCEYGQGYFFSHPLNSSQATALIMANPQW
>CP026692.1|AVH72505.1|4697567_4699364_-|ABC-transporter-ATP-binding-protein
MNYSETRQKLLASNKVKYCCGSSSLKTRSNYWQLLPYIRLQWQTIAKGLIGISGYVLATLVLINLAGKLATPFAQGNVVAIAQITGSCALVFLVRGLFQSIQDMYMAKAALRVAFHLRQQVYTHLQKLNLSYFETAKAGDLSYRLTEDVDRVGEVVNKGFHDFIPCILQLLAIPVYMIYLNWQLTLATVIVAPLMGILVGWFGERLRKYSLKSQNRVSGLSAILAEVFNGIRLVQAFAAENYEIARFGHEAERSLKAKYSAERLKAIQIPIIGFFEALSALSLLIVGAWQISQGHLTVANFFSYLAAAALLIDPIGHTTNNYNEFKQGEASVDRVFELMAIQPTVIEKINAIALAPVKGKVEYRHISFAYKPGEPVLKDISLLVSPGEAIALVGASGAGKTTFVNLLPRFYDPEVGQILIDNVDIRDVKLHSLRRQIGIVPQETIMFSGTIAQNIAFGQNVFDIKAVKEAAKIANAHQFISQLPEGYKTWVGERGVNLSGGQRQRIAIARAVLLNPQILILDEATSALDSESEALVQEALERLMEKRTVFIIAHRLSTVRRCDRILVLEQGQIVESGTHEELLALERRYARFYAQQFS
>CP026692.1|AVH72504.1|4696004_4697462_+|UPF0061-family-protein-YdiU
MTLAETPNYKNSSNPFLTLNYESALESLGDDYYDEVAAEEFPQHVLRWRNDALLPRLGLDPQVVKDEDFITAFGKFQGRKPLLALRYHGYQFGEYNRQLGDGRGFLYGQVRATDGELYDFGTKGSGRTPYSRGGDGMLTLKGGMREVLAAEALHHLGVRTSRCLTMIETGLPLWRGDEPSPTRSAVMIRMSSSHIRFGTFERLHYFQRPDLTKKLLDHVIEQYYQHLSAEQDKYVLFYAELVKRVAELVAQWMAAGFCHAVLNTDNMSITGESFDYGPYAFIPTYNPSFIAAYFDYYGRYCFGNQPSICHLNLQMLQEPLKAIIDKGEMEAALERFDEYYEAEYSSLMLKKLGFENLPYSETVELLNLTIEFLKDSQVGYHEFFYEMARTFSSKWRDEPGFVMDNSDIVPVPGASGIFDDWCILYHQILNDFDSDRTDVIAQTLAVHNPKTALSRPVIESIWESIAQEDNWQPFYDLIKAIQSRR
>CP026692.1|AVH72503.1|4695223_4695679_+|hypothetical-protein
MLINSTKRLSVFSTIFAFATILNGVVLAAPVPSPATTPVLKTQTSAASHQPIKLTNQQRLQIQMARQQRDKDIEALLNPSQDTKFKAALQSRQRIRIVLKSLDLNQDQQKQVQSILQAYNLQVKKILSSQASQPTSNSVGITQPTSQPITK
>CP026692.1|AVH72502.1|4694135_4694711_+|alanine-acetyltransferase
MISELPIIASDRLLLRAAIHEDIPQILKYFINNKTYLTPFYPLWADGFFTEEYWQYQIENSFLEFINGQSLKLFIFTKKNPTVVIGTVNFSNFVRGAAHFCYVGYSLAENKQGKGYMTEGLKSATQYLFQELNFHRVMANYMPHNRRSGNVLKRLGFVVEGYARDYLLINGQWEDHILTSLTNPHWKAPNF
>CP026692.1|AVH72501.1|4692739_4693747_-|biotin-synthase
MVGIRYDWQELEIRAIYNTSLLELIYQAASVHRQYHDPTKIQVCKLISIKTGGCPEDCSYCAQSSRYKTEVKAQALLEKETVVNIAQKAKETGVSRICMGAAWREVRDNSQFEEVLEMVKDVTAMGLEVCCTLGMLTANQARKLSEAGLYAYNHNLDTSQEYYSTIITTRTYSDRLNTIENVRQTNVTVCSGGILGLGETVDDRVGMLQTLANLHPHPESVPINILSQVPGTPLENQPDVPIWDIVRMIATARILMPASDVRLSAGRARLSQVEQAFCFMAGANSIFSSDDNKMLTVTTPCPDYDTDREMLNLLGLGMRPPSQRQEKVASPAVVG
>CP026692.1|AVH72500.1|4691232_4692414_+|methyltransferase
MSDSQTVSAAVAKLYNTYPFPPEALLDEPPPGYNWRWNWLAAYNFCTGQKPQKQDIRILDAGCGTGVSTEYLVHLNPQASVVGIDLSTGALAVAKERCQRSGANRVEFHHLSLFDVEQLPGEFDLINCVGVLHHTLDPIRGIQALAKKLAPGGLMHIFVYGELGRWEIQLMQKAIALLQGDKKGDYRDGVQVGRKIFASLPENNRIVKYDKQRWSLENNKDEYFADMYVHPQEIDYNIETLFELIDASGLEFIGFSNPSFWDLDRLLGKAPELVERAKELSDHQLYRLIELLDPEVTHYEFFLGRPPLIKADWSDDNTLLTAIPELNPCIEGFPSQCFFNYDYQIVNLSVTEFEFMQRCDANSKVADILASVQLGLDGVRTLLQQQLILLTPA
>CP026692.1|AVH72499.1|4690241_4691015_-|serine/threonine-protein-phosphatase
MKKWKAVAGYEIGTSHQKQGIVCQDYGKYCIFDDVIVGAVADGAGSAKHSDVGSRLAVETVLKYFSDINEFPHKQAFSQPLDKEEAQKVFAKIVNQVITELHKQADDEDYSINDLACTLLVFLATPDWVAAMQIGDGFIVVRSQDSEYQLLFQPDKGEFANETTFITSTNALKEMQVEVIPEKQEFICASTDGLEKVAIRLSDWQPFSPFFKPLEEYLHESVNPKEDKYLTEFLNSERLNSRTDDDKTLLLCLFNRE
>CP026692.1|AVH72509.1|4702930_4703926_-|photosystem-reaction-center-subunit-H
MTSEQIIRRSDILNTQVITRDNGKRLGIISQVWVDIDQREVVALGLRDSLISISGIPRYMYLNNISQIGDVILVDNEDVIEDIEVESLSNLINWEVITETGEVLGKVRGFKFNGESGKLESIVIASLGLPQIPDQFVSTYEFSVDEIVSTGPNRLIVFEGAEERVEQLTVGLLERLGIGKAPWERDIEEEYGYTPPRQVAPGNQLPSGVPLQPPRQKVRAPEPVAREEEWTEDYVEEERPQRQVMKARQYESIQYEEDEEEDNWSEATGSDRYQQPQPLKYEAQPYNKPYVDEYDDYDDVEGDAWEDAPKPVNIPKKVKERQPEYEEEGGY
>CP026692.1|AVH72510.1|4704125_4707758_-|chromosome-segregation-protein-SMC
MVHIKRVELTNFKSFGGTTSVPLLPGCTVISGPNGSGKSNILDALLFCLGLSSSKGMRAERLPDLVNNTQTAKGRASIEASVTVTFDLSDEISHKDAKAQREEVEEVEEVGEENLKSKIQNPKSAEWSVTRRLRVTHQGTYTSNYYINGVPCTLTELHGELSNLRVYPEGYNVVLQGDVTSIISMNGRERREIIDELAGVAAFDRKIIQAKSTLDEVKEKEDSCRIIETELTAQRDRLSQDRAKAEKYQKLRTEFLAKQSWEAVLSWRSLQAQQEKLVHEIQTGDRNFSELTTQLTNLNSQIVQKTAELEQLNAHVKALGEEELLAVQSTLATQEAERKQLQRQLTELQTTSQETAKRLLQTQQEIQKHRHSLEEIAETQIVETRFIASSQQQRDEAQQALETSRQAAAEIASASEAWVQQQTAFNRQIEALLHILEPQRTEQAQLRERNNQLQQLIQEQTQLIERDEPLLTQKQVECNQVETEFNTSSEPIQNLAQNLSATEQELQIQQETQKRLLSEQREKQRQLDKIEAQAQAQQEVQGTQASKVILQSGMPGLCGLVVQLGKVEPRHQLALEMAAGGRLGHIVVEDDGVAAAGIELLKQKRAGRATFLPLNKIHAPKFTQDATLRFASGFVNYAVNLVDCDRRYKDVFSYVFGNTVVFANLEAARKNLGLYRIVTLDGELLETSGAMTGGSNTQRSSLRFGNAEAAESDEAIALKTRLVDIERVLERCTEAIATLSARTKKLTQELTEARQTRREQQLQLEQLQKDIKSLTTQLEGTRSQLAQNSEKLATAQSRLEILERELPGQENELQQLRHALAELEASQTPSEWQQIQATIKIQEQQLQQRETALREAEQRLKNLENQQQRLQEKIQEGETRITEYETQQISCRDAIHRVSTQITAIDEQITQTRANLSLMEQNLGEEKQKRDATELEVRSHLLRQQQLEWEIQKLQETQEKRREELIALQTQLRDVGAELPNPLPEVPDKVDLEELQKELRSLTKRLQAMEPVNMLALEEYERTQNRLQELTQKLETLQGERTELLLRIENFTTLRQLAFKEAFDAVNENFQSIFAILSDGDGYLQLENPEDPFSSGLNLVAHPKGKPVQRLASMSGGEKSLTALSFIFALQRYRPSPFYAFDEVDMFLDGANVERLARMIKQQSQQAQFIVVSLRRPMIESAERTIGVTQARGAYTQVLGIKLQSSNTSA
>CP026692.1|AVH72511.1|4708418_4709240_+|carbonic-anhydrase
MKRLIKGLREFKSSYFSTHQQLFEQLSHGQKPRVLFITCSDSRLDPNLITQAQVGELFVIRNAGNIIPPYGASNGGEGATIEYAVQALDVRQIIICGHSHCGAMKGLMKLHNLSDEMPLVHDWLKYAEATRRLVIDHYSHYDEEELLEIIIAENVLTQIENLRTYPVIHSKLYQGELSIYAWIYQIETGEVFAYDPQKHAYVLPQTQLPESEIDESFRGQLSNTNVVVRSPQNQQDDVQPYEKVSISEFEWFPMRRLSPEQMERIYRGSNNGS
>CP026692.1|AVH72512.1|4709385_4709844_-|BON-domain-transport-associated-protein
MKKLILLVVSGILVVGTFGCQEAPKTGSQTPSTTNEAAQAPAKPASQTNQTAKVSETQTTPSAATTGTKVKTDSEKMAATKVKSDLKTEVSAKLNKGLPGNKLQVENKEGEIILKGTATSVEELKKAETLAKEVQGVKTVKVEAKVDTVKKP
>CP026692.1|AVH72513.1|4710310_4711231_+|3'-5'-exonuclease/ribonuclease-D
MPYLTSASEIRAIVAEYTNAKTLWIDTEVADYKSRNPRLSLIQLLDNPQDMSGDRVYLLDVLDQPNIITEFIEKIMINSAIEKVFHNASYDLKFLGSKKAKNITCTLEMAKKIPYYLLPLPNYQLKTIATALCSFNNIDKQEQKGDWGKRPLTEEQIEYAYLDCIYLAQIHLNLLDLQAKASPEPATEDLISLSTRYSQVEQEWKLLNSEFEHLQERIKKAMPAQNISETSNYKLTSYERTTIKAAFTELAKLVQTQGINLDFPIALTQKLQKDLGENLEQLSVDIDKTTSWRLIPKTQESEVEDD
>CP026692.1|AVH72514.1|4711547_4712390_+|TPR-repeat-containing-protein
MRWRLFGQNRTRVNTLFTIAIFTTLTATSSVSCSKNDNVLVTEIGVSQPSRRSATTSIGGEFYLQGKNQHLNGDLQAAIASYSKAISQNSQYGAAYNARGLAYFDLGDKEKAIADYNQALRINPNDSEAYNNLGNARASLGNNREAVKDYSEAIRLNPNYAEAYNNRGNARATNGDKQGAIDDLDQAILLNPKYAIAYNNRGNARAANGDPQGAIADYNQAIRFNPNFAPAYNNRGNARATNGDKQGALKDLQQAASIFQSQGNNDLYQQVMDNIKELGQ
>CP026692.1|AVH72515.1|4712525_4714094_-|actetate-permease
MSSVWFDLPLAADITSLGKFNPLAIAFFFLFVGSSLGITYWAAKLTKNTAQFYTAGGKISGFQNGLALAGDFMSAASFLGITGLVALNGFDGLIYSIGFLVGWPIVMFLIAEPLRNLGKYTFADVVAFRLQQKPVRIASAIGTLVVISFYLIAQMVGAGELIKLLFGFDYELAVVIVGCVMMAYVIFGGMIATTWVQIIKAVLLLGGTILLAILVLARFGFNPIALFAAASQKYTGVLAPGKLVSDPFDAISLGMSLMFGTAGLPHILMRFYTVPDAKAARLSVTYATAIIGVFYLLTFILGFGAMVLVGQDAIKQIGTGGNMAAPMLAEFLGGDAFLGFIAAVSFATILAVVAGLTLSGAAALSHDLWVNVVRSGHADESEQLKVARGATMLLGLVAIFLGILFKGQNVAYMVGLAFAIAASANFPALLLSMLWRRFTTNGAVASMLVGTVSSLVLIYLSPTIQVTILKHASAPFPLKNPGLISIPLAFIVAIVVSLLSTEQLAQEKFAEVEDRIHIGSGM
>CP026692.1|AVH72516.1|4714246_4714522_-|protein-of-unknown-function-DUF485
MNDRTKALQALAAERWRISLILSGAMMFIYFGFILLIAFNKPLLGSLVIPGLSLGILLGALVIVSAWILIFIYVRWANSSYDDQIARLTRK
>CP026692.1|AVH72517.1|4715050_4715659_+|peptidase-M50
MFIETLITEPIHFFRIVVIVIFSITLHELAHGLAAMSQGDNTPQQTGHLTLNPVVHMGKESIIFLCLMGIAWGQMPVNPSKFRSGKLGNILVSAAGPLSNLALGILFIMLLKLFFNPNLSGLLSVEFLYLAARINLTLFLFNLLPIPPLDGFHIFSEIFPQLKPLQYNQFGLFAMMLLFIIPGFGIGISRIADLFIRSGLAM
>CP026692.1|AVH72518.1|4715696_4716221_+|hypothetical-protein
MKIKKKFVVAATSVTLSIAAVLLPSEESMASILPVDQYNHSVSNHLVKSPHEISQQLMVVQPGLFNSLLGDLRIEKFNLVPCFNQERSPFTSSIELLMRLLIIGSFGSVGMVGYTSFVERYFQIINKDLKIIYYSILLLLSLQIIGNFIVLMSSPTSSIASAIHPSSSCILGKP

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Crispr_ID: CP026692_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_24

4963884-4963977

Orphan

Consensus_repeat	Method
TAGCGCAGCGTTAGCGAGTCATCGAGCGTCTGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026692_24

>merge|CP026692|24|4963884-4963977|CRISPRCasFinder
TAGCGCAGCGTTAGCGAGTCATCGAGCGTCTGGGGGTTCCCCCCATGAGGAACTGCCGTTAGCACAGCGTTAGCCAGCCTGCGAGCGTCACCCG

>CP026692|24|23|4963884-4963977|CRISPRCasFinder
TAGCGCAGCGTTAGCGAGTCATCGAGCGTCTGGGG	GTTCCCCCCATGAGGAACTGCCGT
TAGCACAGCGTTAGCCAGCCTGCGAGCGTCACCCG

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH72684.1\|4952741_4953959_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182528
CP026692.1\|AVH72679.1\|4946092_4946530_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237019
CP026692.1\|AVH72691.1\|4965766_4966726_-\|nucleoside-diphosphate-sugar-epimerase	unknown	unknown	gnl\|CDD\|187566
CP026692.1\|AVH72692.1\|4967360_4968659_+\|phosphoribosylamine-glycine-ligase	unknown	unknown	gnl\|CDD\|234856
CP026692.1\|AVH72680.1\|4947872_4949753_-\|glucosamine-fructose-6-phosphate-aminotransferase	unknown	unknown	gnl\|CDD\|234729
CP026692.1\|AVH72681.1\|4950241_4950487_-\|photosystem-I-subunit-VII	unknown	unknown	gnl\|CDD\|177005
CP026692.1\|AVH72697.1\|4972464_4973841_+\|chromosome/plasmid-partitioning-protein-ParA	unknown	unknown	gnl\|CDD\|379293
CP026692.1\|AVH72686.1\|4956250_4957219_-\|taurine-catabolism-dioxygenase-TauD/TfdA	unknown	unknown	gnl\|CDD\|181947
CP026692.1\|AVH72690.1\|4965038_4965242_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH72685.1\|4953978_4955448_-\|RND-family-efflux-transporter-MFP-subunit	unknown	unknown	gnl\|CDD\|235136
CP026692.1\|AVH72698.1\|4973840_4974578_+\|chromosome/plasmid-partitioning-protein-ParB	unknown	unknown	gnl\|CDD\|319251
CP026692.1\|AVH72687.1\|4957870_4959463_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227621
CP026692.1\|AVH72694.1\|4969108_4969453_+\|XisI-protein	unknown	unknown	gnl\|CDD\|370165
CP026692.1\|AVH72689.1\|4964097_4964736_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH72688.1\|4959783_4963761_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH72693.1\|4968704_4969121_+\|XisH-protein	unknown	unknown	gnl\|CDD\|370136
CP026692.1\|AVH72683.1\|4951876_4952536_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH72696.1\|4971834_4972206_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379090
CP026692.1\|AVH72695.1\|4969734_4971681_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|380161
CP026692.1\|AVH72682.1\|4950982_4951219_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH72684.1\|4952741_4953959_-\|ABC-transporter-permease	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	1.92569e-72
CP026692.1\|AVH72679.1\|4946092_4946530_+\|hypothetical-protein	gnl\|CDD\|237019	PRK11907, PRK11907, bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase.	0.0010891
CP026692.1\|AVH72692.1\|4967360_4968659_+\|phosphoribosylamine-glycine-ligase	gnl\|CDD\|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
CP026692.1\|AVH72680.1\|4947872_4949753_-\|glucosamine-fructose-6-phosphate-aminotransferase	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
CP026692.1\|AVH72681.1\|4950241_4950487_-\|photosystem-I-subunit-VII	gnl\|CDD\|177005	CHL00065, psaC, photosystem I subunit VII.	1.29367e-53
CP026692.1\|AVH72697.1\|4972464_4973841_+\|chromosome/plasmid-partitioning-protein-ParA	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	1.4268e-57
CP026692.1\|AVH72686.1\|4956250_4957219_-\|taurine-catabolism-dioxygenase-TauD/TfdA	gnl\|CDD\|181947	PRK09553, tauD, taurine dioxygenase; Reviewed.	6.62624e-82
CP026692.1\|AVH72685.1\|4953978_4955448_-\|RND-family-efflux-transporter-MFP-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	3.73768e-41
CP026692.1\|AVH72698.1\|4973840_4974578_+\|chromosome/plasmid-partitioning-protein-ParB	gnl\|CDD\|319251	cd16393, SPO0J_N, Thermus thermophilus stage 0 sporulation protein J-like N-terminal domain, ParB family member. Spo0J (stage 0 sporulation protein J) is a ParB family member, a critical component of the ParABS-type bacterial chromosome segregation system. The Spo0J N-terminal region acts in protein-protein interaction and is adjacent to the DNA-binding domain that binds to parS sites. Two Spo0J bind per parS site, and Spo0J interacts with neighbors via the N-terminal domain to form oligomers via an Arginine-rich patch (RRXR). This superfamily represents the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system. parABS contributes to the efficient segregation of chromosomes and low-copy number plasmids to daughter cells during prokaryotic cell division. The process includes the parA (Walker box) ATPase, the ParB DNA-binding protein and a parS cis-acting DNA sites. Binding of ParB to centromere-like parS sites is followed by non-specific binding to DNA ("spreading", which has been implicated in gene silencing in plasmid P1) and oligomerization of additional ParB molecules near the parS sites. It has been proposed that ParB-ParB cross-linking compacts the DNA, binds to parA via the N-terminal region, and leads to parA separating the ParB-parS complexes and the recruitment of the SMC (structural maintenance of chromosomes) complexes. The ParB N-terminal domain of Bacillus subtilis and other species contains a Arginine-rich ParB Box II with residues essential for bridging of the ParB-parS complexes. The arginine-rich ParB Box II consensus (I[VIL]AGERR[FYW]RA[AS] identified in several species is partially conserved with this family and related families. Mutations within the basic columns particularly debilitate spreading from the parS sites and impair SMC recruitment. The C-terminal domain contains a HTH DNA-binding motif and is the primary homo-dimerization domain, and binds to parS DNA sites. Additional homo-dimerization contacts are found along the N-terminal domain, but dimerization of the N-terminus may only occur after concentration at ParB-parS foci.	0.000805583
CP026692.1\|AVH72687.1\|4957870_4959463_+\|hypothetical-protein	gnl\|CDD\|227621	COG5305, COG5305, Predicted membrane protein [Function unknown].	1.87525e-80
CP026692.1\|AVH72694.1\|4969108_4969453_+\|XisI-protein	gnl\|CDD\|370165	pfam08869, XisI, XisI protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	3.02873e-48
CP026692.1\|AVH72691.1\|4965766_4966726_-\|nucleoside-diphosphate-sugar-epimerase	gnl\|CDD\|187566	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs. This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	9.49197e-110
CP026692.1\|AVH72696.1\|4971834_4972206_-\|hypothetical-protein	gnl\|CDD\|379090	pfam13248, zf-ribbon_3, zinc-ribbon domain. This family consists of a single zinc ribbon domain, ie half of a pair as in family DZR. pfam12773.	0.00182991
CP026692.1\|AVH72695.1\|4969734_4971681_+\|histidine-kinase	gnl\|CDD\|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp\|Q2G2U4.1\|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	7.43703e-67
CP026692.1\|AVH72693.1\|4968704_4969121_+\|XisH-protein	gnl\|CDD\|370136	pfam08814, XisH, XisH protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	3.43357e-74

>CP026692.1|AVH72688.1|4959783_4963761_+|hypothetical-protein
MSSPLERPLKIEIRLPSSDPQLLEGLDIWLRLGLISDAQVRQLCREFLICAVVLQPQVEAQTKVVFATSDPVQQLPIAALQASSGKQPQQKPAKPNFISIMLQSLGAELSVRWLLFLGVFLVVVSSGVLAASQWARFPASGQYGVLFAYTLSFWGLSFWATRQNNLRLTAQTLLIATLLLVPVNFWAMDSFRLWQNPVDWIVVAIAFPTLTAITVLLSKNQTIFTNLHPGKLPLANILGLSYLHWGWQLRGFPLIAVYLATIATTIITVYHNLFQQPHTVSDDRRRLSISLPATVIIYSLIVLLVRAIFVTKVDVTLLGLAIGICGWLMIWLAQQGRRAGGQGSRGAGEQGGRGAGEAGEVGEVTLIYSSSPLSPSSLLLWERLGGVLLFLGWLVSVVNYPWQAIAVSGLGLWFVGSRLRRYSLKRDFAGVFVIGLETILLSWRLVPDNLQKLAIATGTQLTNSQNEPWALLGIALFPYVILMVALTDSLYRSQKRELAKFGELLTLLFGAFLTTIAIVNPTLRSLNLLFSTATLAFVTQRRSPSSLPLVYLTHIMGVLTFCFTINWLFPSLTQQAWASILLALMVAEWRFSLEEGLWQRSAWDIGLGLAAASFFLLWMNAESSWYGIADSRSDWGVLWLVTPLALTGVANATIIERQITSRYLSVLAVIIAQLVTLQLSGIRLIGLAVGAGLMFANTRYLRNQVSALITEGFVLSFIGVLLWTGIPGLPRLAVAGWFVAGAIATLSLWLARTVLSRRGNELAVIYAAASDKWAITLCGLELLGLTLHSVLIYQGFTTSGFLFLIATAIALAAIVYRSWREPTNWAFYGIGWCLELLISQVLGLGERSIVRIAIANIALGLITQLVGEWWRRRHQLERFPSSLHILPLIYGAFSILLRLNTFTEWTGLYSLGAALIVIGVGRRRESFKPLLYLGIIGVSISAYELLFYQMSQASGGALGDGLIAMSALGASIMYAYRILSPWLVSYFRLTPEELKRIAHIHWVWGSCLLMAAIPLPIGVNRLVGLATGVFLIRYAIFQGRNSPTSPNFFGGITIAEMWVYLGLLEVAGMRIYWRETAVGRFWAGPLVPWNGAIACVVAYFLYILPWESWGWSKRPWQQAAYIIPLIILWETRLQTYPITLVLAAGFYIFLAKVGENIRFTYISVALIDWALYRWFDSLRLTDTLWYITPIGLSLLYIALVDTQLRLPEYKTPRHILRVLGSGLICGWAILFHQNTAWIPGIFSLIAIFAGLALRVRAFLYIGTATFLITTIYQSVIFSLQYSFLKWVVGLLVGILLIYIAANFETRRAQITSLIRSAIDEFQSWE
>CP026692.1|AVH72687.1|4957870_4959463_+|hypothetical-protein
MKKQLSQKWTFSKYWLRFLIIILLVIGAFFRFVNIDKKIYWGDEVFSSLRISGYTQSEMKTQLSNGHLIGIEDLHKYQYPNPEKNVIDTIKGLILEDSQILPLYILITRFWVECFGNSIAAIRSFSAFISLLTFPCIYWLCQELFESSLVGWIAIGLVAISPIHIVYAQEARSYSLGIVAILISSVALLRAMRLQTNVSWCIYAATLSIGFYTHLFFTLVAFGQGIYLVVIEGFRLSKISISYVLSLFAGFITFVPWIWIIITNPQPEAVTWANTKQTLLMSATRWAGIFSRAFIDLGISLNEPGKLKFVLIPFILIILALISYSIYFVCRKTSKKVWLFVLTLIGSVGLPLLITDFVFQKRFATSRYTLPSVLGIQLAVAYLFTTKIASIYTKAWQKKFWSLVAFMVIMGGVVSCMVHSQAQIWWNQVPDKYQEYPQIANIINQGKKPLLISDEDNLFPQLQVLSKLIDSKVQFQIVGKNQLPEINNGFSDIFLFLFEPSDFLKAGIEKVYNSKLQQGNHYLWKITKPN
>CP026692.1|AVH72686.1|4956250_4957219_-|taurine-catabolism-dioxygenase-TauD/TfdA
MSNKQIEVRQVAGFIGAEISGVDLSRPLHDDAVKEIRQALLKWKVVFFRGQNIDHAAQIAFTARFGEVTYAHPHEDEPIEGFSEILPIDRSRYERRNGLRRSSYESRWHTDVTAVVNPPAASILRAVNVPSFGGDTQWTNLVAAYEGLSAPLRALADTLKAEHRFNARLNFPSNSKIAQRIAANPLVSIHPVVRVHPETGERALYVNPGFTSHIIDVSRQESDLLLELFFNQIAKPAYTTRFRWNNGDIAFWDNRATSHLAPQDLDHLEVERVLYRTTITGDVPVGPDGFRSQVVEGEAFNSELPTVLKNKAEKLEAVPALS
>CP026692.1|AVH72685.1|4953978_4955448_-|RND-family-efflux-transporter-MFP-subunit
MATHIEIPVIGKVKYPLRWLVGLMAGSALVVGTITTYTLVNQGANKEDIAQLTVPVAAQNVTLRITASGKVVPVQSVNISPKNPGVLSQLYVEQGDRIQQGQILARMDSASIEAQRSQYRANLAQSQAQLAEAKAGSRPQEIAQARARLAQSQAQLAAAKAGNRPQEIAQSQSQVDAAQAKANYTSGQVKRYQYLYEQGAENKQLLDQAISDDKSAKASLEEIKKRLSLVQSGTRSEEIDQRQAAVNEARAALVLLEDGTRSEEIAQRQAAVASAQAQLKGVQVQLEDTIIRAPLSGIVTQKYAEPGAFVTPTTSASASASATSSSIVAVARGLEVLAQVPEADIGRIKPGQQVEIVADAYPDQVFKGHVRLIAPEAVIEQGVTSFQVRVALDTGIDKLRSGLNVDLTFLGDRVNNALVLPTVSIVTEKGKTGVLVPDAKNKPQFREITVGAQIQDQTQILEGVKQGDRIFVNPPKDYKIEKTKEKNNS
>CP026692.1|AVH72684.1|4952741_4953959_-|ABC-transporter-permease
MNFLESMNMAGKTLLSNKLRSALTMLGIVIGNASVIAMIGIGEGGQKYVNKQLESLGPNVLFVLPGNRETQRISFEVPKTLVLQDAEAIASQVPTVVGVAPELNTRQVITYRNRNTDVNIIGTTPSFLPVRDFETAKGRFFSEVDIKRSNQVVVLGGDLTEKLFGNSNAIGQQLRIGNTSFQVIGTLTSKGSSVGADYDNAALIPITTSANRLVGKNSPYGIALDYLVAAARDSDSVDAAEFQITNLLRLRHKINGEDDFTLRTQKDALQTVGQITGALTIMLAAIAGISLFVGGIGIMNIMLVSVTERTQEIGLRKAIGATEQDILLQFIIEAVIVSAAGGLVGTAIGISGILLVGALTPLEASLSPVAITMAVGVSGAIGLFFGVVPARRAAKLDPIVALRSA
>CP026692.1|AVH72683.1|4951876_4952536_-|hypothetical-protein
MVTPEWEISIKILNSKMLKKSLLNCLILPFSLMPWLCVGTLFDSQANALPGQSTEEVGTWIKAHPTLRPRSGERLFVQKTDTAAQRFTFQASVLPPGRVEFSKDRGTIRTERITMYDAINGMTFARLQESLRVIYGLEIYQDYDRAQVVYEYPNQEAVNSARLAKTPIREALKGELRVGDRYVYWVEVAQPKTGKAFTGQMTVLLKTDLDKLENELQIR
>CP026692.1|AVH72682.1|4950982_4951219_-|hypothetical-protein
MISPNLLEIERSILALSVEEQLWLLESIARQIREREYVKDKLADANNLEEQLQVTAIEPKIETKIAAINDEFAISEIL
>CP026692.1|AVH72681.1|4950241_4950487_-|photosystem-I-subunit-VII
MSHSVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAAQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLAY
>CP026692.1|AVH72680.1|4947872_4949753_-|glucosamine-fructose-6-phosphate-aminotransferase
MCGIVGYIGTQAATDILLAGLEKLEYRGYDSAGIATVWEGEVNCVRAKGKLHNLRSKLEQIETPAPIGIGHTRWATHGKPEEYNAHPHLDTAKRVAVVQNGIIENYRELREELKAKGHEFRSETDTEVIPHLIAEFLKNFPPSSSSSPFLEAIRQAVNHLKGAFAIAVISADYPDELIVVRQQAPLVIGFGQGELFCASDTPAIVAYTRAVLPLENGEIARLTPLGVEIYNFAGDRLKKQPRLLNFNPAMVEKQGFKHFMLKEIHEQPGVVRASLDAYFNPAESTESPINLGLPGDLYNDLEQIQILACGTSWHAALIGKYLLEQLAGISTQVDYASEYRYAPSPVTANTLIIGVTQSGETADTLAALTMEKERRQGKESKYQARLLGITNRPESSLGHLVPHIISTLAGIEIGVAATKTFTAQLMAFYALALDLAARRQTVSKDILEKIINGLRQIPKEIEATLESQERLTEQLAHEFAETKDFIFIGRGINFPIALEGALKLKEISYIHAEGYPAGEMKHGPIALLDAKVPVVAIAIPGSVYEKVISNAQEAKARDSRLIGVTPVNDGEAAEIFNDLLPISHVEELLSPILTVVPLQLLAYHIAARRGLDVDQPRNLAKSVTVE
>CP026692.1|AVH72679.1|4946092_4946530_+|hypothetical-protein
MNNQLKPRQVGIMLTLFTVLILSSCAKKPEESTSTTPQTPTAVAPASPSSSTATSPVPGNTTSSSSKKPASAGNKTAVLAAAQSLGVKPQNQTTCPSDALVKGKITNKRGNIYHLPKTLDYEKVKPDICFKDANIAQQAGFRAPK
>CP026692.1|AVH72689.1|4964097_4964736_-|hypothetical-protein
MNFKHLKQYRLLSSTAILVMGIATLTSLSFLRISQANQANPASTSGVNNQAVYTDRYGFKFSYSPTQFVVVSQSPQSGDTSAVGWIAIWTKQDYQKISGVYEGDYPPNVTISVHRNPQQLSLQKWIQQKDWIVDAKNFQQRTIGGHKGLFFTYRGLYEHENIIFKNPRDNNMILISFAKTNYDTSNDVVYRKAFNEAINSLKLANVAQRRSL
>CP026692.1|AVH72690.1|4965038_4965242_-|hypothetical-protein
MVSNELIKQLRKLDRVDKLQIIQLLAAELANEENNLIKSGASYPVWSPYDAVDAANIMLETLNAETD
>CP026692.1|AVH72691.1|4965766_4966726_-|nucleoside-diphosphate-sugar-epimerase
MAKIIVTGVAGFIGSHLAETLLKQGNEVIGIDEFNDYYDPMLKRNNVAHLYRLPGFALIEGDMQFLDWQKLLKDVDVVYHQAAQAGVRASWGKAFRGYTERNVNATQVLLEAAKDARHLKRLVFASSSSVYGDAETLPTHERICPQPVSPYGITKLAAEFLCELYYKNFGVPCVTLRYFTVYGPKQRPDMAFHKFFQSILHDEAIPIYGDGQQTREFTFVSDIVAANLAAATAPQVVGEIFNIGGGSRVVLAEVLNTIEEIVGKPIKRNHIEKAIGDARHTGADVSKAQKILGYQPQVSLKEGLTQEWEWVKSLYSLSS
>CP026692.1|AVH72692.1|4967360_4968659_+|phosphoribosylamine-glycine-ligase
MKVLVVGNGGREHALAWKLLQSKQIEQVVCVPGNGGTASMEGCQNLPLAVDDFEGMSRYALEHGITLVIVGPEVPLAKGITDYLQDKGLMVFGPVRAGAQIEASKAWAKALMQEAGIPTARAAVFTEAAAAKSYVKSQGAPIVVKADGLAAGKGVTVAETVAQAESAVDAIFQGQFGSAGKFVVIEECLIGQEVSVLALTDGLTIRPLLPAQDHKRIGDGDTGENTGGMGAYSPAPIATPELMARIQTEVLERAIATLRAKGIDYRGVLYAGLMIAPDGDLKVLEFNCRFGDPETQVILPLLETPLEELILACVQQRLSELPPIAWKGGASATVVAASGGYPGEYEKGQVITGIGKAEATGATVFHAGTKLNQQQEIVTDGGRVLNVTGIGENFEQAIAQAYASIKYIQFQGMYYRRDIGHRVVSVKQRETP
>CP026692.1|AVH72693.1|4968704_4969121_+|XisH-protein
MPKLDIIHNAVKNALIKDGWAITDDPYVIQYRRTTLYADLGAERPIGAERDGQKLVVEVKSFVGASKIQDLKEALGQYDIYRYLLEETAPDRKLYLAVGAIAYKNFFNQDVIQLILHKHQLPLIVVDTETEEITQWIN
>CP026692.1|AVH72694.1|4969108_4969453_+|XisI-protein
MDKLTEYPKIIKRILTEYVELCNRRPNRDIETFLIMDEPKGHYIWMNLGWQHGERITGMTVYIRIRDCKFWIEEDWTEYGIATDLVRAGVAQEDIVLAFHEPKMRQYTDFAVAS
>CP026692.1|AVH72695.1|4969734_4971681_+|histidine-kinase
MLTLLKTIRDEIASWWSEFTLQTKLLAVATMVVSLVMSGLTFWAVNTIQQDARMNDTRFGRDLGLLLAANVAPLIADNNLTEVAQFSQRFYSSTSSVRYMLYADENGEIFFGIPFWEAEVENSLTIKRRIQLPEDYPGDGEKPMVRQHTTPDGIVTDVFIPLIVNKKYLGVLAIGINPNQTAVISTNFTRDVTIAVFITIWVMVILAGVINALTITKPIKELLVGVKQIATGNFKQRINLPLGGELGELILSFNEMAERLERYEEQNIEELTAEKAKLETLVSTIADGAVLIDNNMQVILVNPTAERIFGWEAANVVGCNVLHHLPASVQIEITRPLYEMAAGECESAEFRIFINQPIPRTIRILLTTVLNLQRESIKGIAITIQDITREVELNDAKSQFISNVSHELRTPLFNIKTYIETLHDYGEDLALQERQEFLQTVNHETDRLTRLVNDVLDLSKLESGRSYSFDGVDLAQAIEQTLRTYQLNAKDKGVELVQEVAPDLPLVLGNYDLLVQVFGNLIGNALKFTKAGGKVAIRAYQLDFKPSHTQSAPVRIEISDTGIGIATEDQHSIFERFFRVENRVHTLEGTGLGLSIVRNIIDRHRSKVHLVSEVSIGTTFWFDLATFEEKAPPIQVEPIAEASNIITA
>CP026692.1|AVH72696.1|4971834_4972206_-|hypothetical-protein
MATVSCPHCHQLVDSQAINCPYCRTTLKAYGHPGIPLHRAAGDGYLCDTCTYHADDTCNFPKRPYAKDCTLYQNIEETKLELEQQRYTNSFAVTVKSWVKRNQALLLLLGLLLVCLLFVILRS
>CP026692.1|AVH72697.1|4972464_4973841_+|chromosome/plasmid-partitioning-protein-ParA
MPFNPELCRNESEVESKLIVQYLLPQLGYTPDTWHQEVAVGSIRLDFLAFAAQVIPFVLDANSPLSVVMEAKHPKQNLNHHIHRLRHYLTSLNVRYGLLTNGKEIRIYQKSQYDIQLLFQCSGKEVEIKLDEIKFFIGRDSLKEGQLVDKPEVQIENNLSFETKRQHSMKTIAIYHNKGGVGKTTVAVNLAAALRKKGKNVLLVDIDSQANTTFATGLIKFQFEEDDNLRERNVYHLLESGDFNFIPEVVRTSDYFNNPEIDVIPSHITLIEYQEKLNKILASRSRLVTKLKKVENNYDIVIIDTPPSRDLYAEVALIATDYLIIPSDLKPFANQGLPTVKNFVNQINESREMMGKSPINIIGVLASKISTNAKFLQYNFPKQREVISERYQLPIMESVIYDRTALSECMNQTIPVGDLEYPDPKSIIKFAELKTSAQISAEEFNVLADEVIRKMGVY
>CP026692.1|AVH72698.1|4973840_4974578_+|chromosome/plasmid-partitioning-protein-ParB
MINFSLVDVKSIASNQPRSNFAEADLENLADIIIETGGIIRPLVVKVTGVESYTVVDGHFEYYAAVRAREKNPRQGEMVNAFVIAPKLEDLVVKQVASLKEIDSSTKQVTLQSETTKLEPRLANLELRLEKQFNEFKSEFLQERQRIDSQFKQLENLIPQKSEQSNPLSLLNSLDKDELSIKLQRSRIPGAEKLAKGIFDARRKKPKQEFEDYRDVVKSVKSLGDKTIKLGDKTILTIIDEWSRS

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Crispr_ID: CP026692_29

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_29

6260679-6261008

Orphan

V-U5

Consensus_repeat	Method
GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG	PILER-CR
GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG	CRISPRCasFinder
GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG	CRT

4 spacers

The CRISPR arrays of CP026692_29

>merge|CP026692|29|6260679-6261008|PILER-CR,CRISPRCasFinder,CRT
GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAGGACTTTGTAAAATCTAAATCCATCTGATTAGCCGAAGTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAGATATTGATTGGGTGCGATCGCTCGTAGTTGAGTGCTTTGATGTGGCAACAACCCTCCAGGTACTGCGTGGGTTGAAAGTTTTGGGTTGGTAGGCTATCAAAAATTGCCGTAAAGTGGCAACAACCCTCCAGCTACTGGGTGGGTTGAAAGCGCTCAAATCTCGTAGGGGATGAGCGGCTATTGGTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG

>CP026692|29|7|6260679-6261008|PILER-CR
GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG	GACTTTGTAAAATCTAAATCCATCTGATTAGCCGAA
GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG	ATATTGATTGGGTGCGATCGCTCGTAGTTGAGTGCTTTGAT
GTGGCAACAACCCTCCAGGTACTGCGTGGGTTGAAAG	TTTTGGGTTGGTAGGCTATCAAAAATTGCCGTAAA
GTGGCAACAACCCTCCAGCTACTGGGTGGGTTGAAAG	CGCTCAAATCTCGTAGGGGATGAGCGGCTATTG
GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG

>CP026692|29|27|6260679-6261008|CRISPRCasFinder
GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG	GACTTTGTAAAATCTAAATCCATCTGATTAGCCGAA
GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG	ATATTGATTGGGTGCGATCGCTCGTAGTTGAGTGCTTTGAT
GTGGCAACAACCCTCCAGGTACTGCGTGGGTTGAAAG	TTTTGGGTTGGTAGGCTATCAAAAATTGCCGTAAA
GTGGCAACAACCCTCCAGCTACTGGGTGGGTTGAAAG	CGCTCAAATCTCGTAGGGGATGAGCGGCTATTG
GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG

>CP026692|29|9|6260679-6261008|CRT
GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG	GACTTTGTAAAATCTAAATCCATCTGATTAGCCGAA
GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG	ATATTGATTGGGTGCGATCGCTCGTAGTTGAGTGCTTTGAT
GTGGCAACAACCCTCCAGGTACTGCGTGGGTTGAAAG	TTTTGGGTTGGTAGGCTATCAAAAATTGCCGTAAA
GTGGCAACAACCCTCCAGCTACTGGGTGGGTTGAAAG	CGCTCAAATCTCGTAGGGGATGAGCGGCTATTG
GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH73680.1\|6264362_6265052_-\|CAAX-amino-terminal-protease	unknown	unknown	gnl\|CDD\|376806
CP026692.1\|AVH73670.1\|6247566_6248415_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH73679.1\|6263171_6264332_+\|Crp-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
CP026692.1\|AVH73674.1\|6252075_6253026_+\|acylaldehyde-oxidase/xanthine-dehydrogenase	unknown	unknown	gnl\|CDD\|224446
CP026692.1\|AVH73668.1\|6246278_6246602_-\|protein-of-unknown-function-DUF1815	unknown	unknown	gnl\|CDD\|285990
CP026692.1\|AVH73669.1\|6246740_6247250_-\|gluconate-kinase	unknown	unknown	gnl\|CDD\|225804
CP026692.1\|AVH73685.1\|6272550_6273531_+\|nuclease	unknown	unknown	gnl\|CDD\|224442
CP026692.1\|AVH73672.1\|6249605_6250799_-\|FAD-binding-monooxygenase	unknown	unknown	gnl\|CDD\|223727
CP026692.1\|AVH73682.1\|6267920_6269015_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP026692.1\|AVH73681.1\|6265748_6267299_+\|glycerol-kinase	unknown	unknown	gnl\|CDD\|198361
CP026692.1\|AVH73683.1\|6269736_6270456_+\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225107
CP026692.1\|AVH73686.1\|6273629_6274544_+\|homoserine-kinase	unknown	unknown	gnl\|CDD\|234920
CP026692.1\|AVH73676.1\|6255543_6257058_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|381089
CP026692.1\|AVH73671.1\|6248672_6249182_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH73687.1\|6274573_6275083_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236912
CP026692.1\|AVH73673.1\|6251448_6251946_+\|FAD-binding-molybdopterin-dehydrogenase	unknown	unknown	gnl\|CDD\|224238
CP026692.1\|AVH73684.1\|6270643_6272332_+\|NAD(P)H-quinone-oxidoreductase-subunit-4	unknown	unknown	gnl\|CDD\|237137
CP026692.1\|AVH73675.1\|6254127_6255291_-\|bifunctional-arginine-biosynthesis-protein-ArgJ	unknown	unknown	gnl\|CDD\|239065
CP026692.1\|AVH73678.1\|6261563_6262184_-\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH73677.1\|6257076_6259050_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|106506

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH73680.1\|6264362_6265052_-\|CAAX-amino-terminal-protease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	5.61661e-08
CP026692.1\|AVH73669.1\|6246740_6247250_-\|gluconate-kinase	gnl\|CDD\|225804	COG3265, GntK, Gluconate kinase [Carbohydrate transport and metabolism].	2.40022e-67
CP026692.1\|AVH73679.1\|6263171_6264332_+\|Crp-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	2.27805e-27
CP026692.1\|AVH73668.1\|6246278_6246602_-\|protein-of-unknown-function-DUF1815	gnl\|CDD\|285990	pfam08844, DUF1815, Domain of unknown function (DUF1815). This presumed domain is about 100 amino acids in length and is functionally uncharacterized.	2.96922e-55
CP026692.1\|AVH73672.1\|6249605_6250799_-\|FAD-binding-monooxygenase	gnl\|CDD\|223727	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion].	4.22348e-56
CP026692.1\|AVH73685.1\|6272550_6273531_+\|nuclease	gnl\|CDD\|224442	COG1525, COG1525, Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair].	1.62553e-13
CP026692.1\|AVH73684.1\|6270643_6272332_+\|NAD(P)H-quinone-oxidoreductase-subunit-4	gnl\|CDD\|237137	PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase subunit 4; Provisional.	0
CP026692.1\|AVH73682.1\|6267920_6269015_-\|histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.53932e-52
CP026692.1\|AVH73681.1\|6265748_6267299_+\|glycerol-kinase	gnl\|CDD\|198361	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases. This subgroup is composed of mostly bacterial and archaeal glycerol kinases (GK), including the well characterized proteins from Escherichia coli (EcGK), Thermococcus kodakaraensis (TkGK), and Enterococcus casseliflavus (EnGK). GKs contain two large domains separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The high affinity ATP binding site of EcGK is created only by a substrate-induced conformational change, which is initiated by protein-protein interactions through complex formation with enzyme IIAGlc (also known as IIIGlc), the glucose-specific phosphocarrier protein of the phosphotransferase system (PTS). EcGK exists in a dimer-tetramer equilibrium. IIAGlc binds to both EcGK dimer and tetramer, and inhibits the uptake and subsequent metabolism of glycerol and maltose. Another well-known allosteric regulator of EcGK is fructose 1,6-bisphosphate (FBP), which binds to the EcGK tetramer and plays an essential role in the stabilization of the inactive tetrameric form. EcGK requires Mg2+ for its enzymatic activity. Members in this subgroup belong to the FGGY family of carbohydrate kinases.	0
CP026692.1\|AVH73683.1\|6269736_6270456_+\|LuxR-family-transcriptional-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	7.58279e-66
CP026692.1\|AVH73676.1\|6255543_6257058_-\|histidine-kinase	gnl\|CDD\|381089	cd17534, REC_DC-like, phosphoacceptor receiver (REC) domain of modulated diguanylate cyclase and similar domains. This groups includes a modulated diguanylate cyclase containing a PAS sensor domain from Desulfovibrio desulfuricans G20. Members of this group contain N-terminal REC domains and various output domains including the GGDEF, histidine kinase, and helix-turn-helix (HTH) DNA binding domains. Also included in this family is Mycobacterium tuberculosis PdtaR, a transcriptional antiterminator that contains a REC domain and an ANTAR RNA-binding output domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.39474e-60
CP026692.1\|AVH73674.1\|6252075_6253026_+\|acylaldehyde-oxidase/xanthine-dehydrogenase	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	9.87113e-59
CP026692.1\|AVH73687.1\|6274573_6275083_+\|hypothetical-protein	gnl\|CDD\|236912	PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional.	0.00257711
CP026692.1\|AVH73673.1\|6251448_6251946_+\|FAD-binding-molybdopterin-dehydrogenase	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	7.10707e-28
CP026692.1\|AVH73686.1\|6273629_6274544_+\|homoserine-kinase	gnl\|CDD\|234920	PRK01212, PRK01212, homoserine kinase; Provisional.	1.03044e-136
CP026692.1\|AVH73675.1\|6254127_6255291_-\|bifunctional-arginine-biosynthesis-protein-ArgJ	gnl\|CDD\|239065	cd02152, OAT, Ornithine acetyltransferase (OAT) family; also referred to as ArgJ. OAT catalyzes the first and fifth steps in arginine biosynthesis, coupling acetylation of glutamate with deacetylation of N-acetylornithine, which allows recycling of the acetyl group in the arginine biosynthetic pathway. Members of this family may experience feedback inhibition by L-arginine. The active enzyme is a heterotetramer of two alpha and two beta chains, where the alpha and beta chains are the result of autocatalytic cleavage. OATs found in the clavulanic acid biosynthesis gene cluster catalyze the fifth step only, and may utilize acetyl acceptors other than glutamate.	7.36332e-173
CP026692.1\|AVH73677.1\|6257076_6259050_-\|histidine-kinase	gnl\|CDD\|106506	PRK13560, PRK13560, hypothetical protein; Provisional.	3.69955e-80

>CP026692.1|AVH73677.1|6257076_6259050_-|histidine-kinase
MEFLNNFFSTSQFIPHGHCYLWKPGLVWLHLISDVLTGLAYYSIPVMLVYFVRKRRDMPFGWIFLMFSTFIVACGTTHLMDVWTLWYPTYWLSGLLKAITAFVSVLTAIQLVPLMPQVLALSNPAQLEAANYQLAREIAERIRTEEVLRESEQRWQLALRGNNDGIWDWNVKTNEVFFSARWKEMLGYEDNEISNHLDECVTRVHPNDLDWVKQAVQDHFAQKTPFYIAEYRALCKDGTYKWILDRGQALWDEDGNVVRMAGSHTDITDRKQAEETLNSLLNQLESMVEERTAELTKINKSLQTEITERQRIEEALRESEQRFRAAFHQAAVGIAHIAIDGSWLLVNQKLCDLLGYTLEELQLLTFQDITHPDDLNTNLKYVEQILADNIQTYSMEKRYFRKDNSIVWVNLTVSLMRESSGEPKYFISVVEDINERKAAQRERKQWEEQIKASLLEKEVLLKEIYHRVKNNLQVISSLLNLQSAYIKDKEDLVIFQQSQQRIASMALVHEKLYQSQDLAKINFGEYIRDLVASLFTAYEVDENAITLTINTEDCISLGLDTAIPCSLIIHELVSNSLKYAFTKGSNGAIHIEIKKIINNKLTLIVSDNGIGLPPNFDLKKLASLGWELVDALTHQLAGNINITGATGVECQVTFPLP
>CP026692.1|AVH73676.1|6255543_6257058_-|histidine-kinase
MTNAKILVVEDEAIVAKDLQYRLNKFGYTVPAIASSGEEAINIAREISPDLVLMDIKLKGSIDGIQAAEEIYKRLDIPVIYLTAYADENTLERAKITESFGYLLKPFKERELQTNIEITLIKHSLEKQLKVNKKWLDALLKSISDGVIASDLQDLITFMNPVAENLTGWKQSEACGRNSSEVFNIANGKTHNPIESPIIKVLQDGTIVNLPAETILITKDGAEIPIDHSAAPIKDDKDNITGAVLVFRDITERKRAIEARQKQIEQEQLVVQWEEINQLKNDFLNLVSHELRSPLSSIKMMIQMIQLSNNAEDAQRYLKVMESECDRELELINDLLDLQRLESSSYPVITPDTLLLQQWLLWVIEPFQIRVQEHQQTLQPNFPANLPPLFSDGISLERIIVELLNNACKYTPAGGEIVLSVSHNSSEAPAKTIITVSNSAEIPVTKLPRIFDKFYRIPNADIWNQGGSGLGLSIVQKLVEQLQGNIQVESGNGWTTFTLALTDL
>CP026692.1|AVH73675.1|6254127_6255291_-|bifunctional-arginine-biosynthesis-protein-ArgJ
MSLTISSTPQGFSAFITNLGIRDTTDDFVFIKSSVPCVADGVFTQSLFAGPSVTISRGNLKDSQAQGIVVISKNANVANGSVGIADAQEVLQLVATETGITAHNIVIASTGVIGRRYPIEKIRAGLLGLGKKLTDADFHAAARGIMTTDTVAKLATRQIGNAKLVGIAKGVGMIEPNMATLLTFFFTDAAISANNLRSIFRSTIDKTFNCLSVDTDTSTSDSAVILANGIAGEVSEPDFASALQEVAQELVLKIARDAEGATKIIEVTVDSAINYAQAKTVAKAIVNSPLVKTAVYGADPNWGRVAMAIGKCENEHQINPERVVIRFDNVKVYPSSLTDENLEQLRKIMSKDKVNIHVSLNIGESSATVWGCDLSEGYIEINGKYST
>CP026692.1|AVH73674.1|6252075_6253026_+|acylaldehyde-oxidase/xanthine-dehydrogenase
MNKIIGKPLDRVDGRLKVTGEAPYTADVPIENLTYGVIFQSAIASGKIIQIDASAAAVAPGVLDVVTHQQTPSLVKIPFPITGNSMTVASVSPAVYKAVIAARDKIIKMAIEDANSLLYGSQAEDITVESGEIFLKQDPSKRDRYTDILRRHGLESLEVTEESSLKPESQEYAKHSFGAIFIEVAVDELLGEIKVRRCVGVYGAGRILNFKTARSQVIGGITWGIGMALMEKTVMDANQGRIVGANLSDYLIPVHADIPNMEVQFIEERDPYVNALGTKSLGELPIVGLAAAISNAVYHATGKRIRDLPITPDKLL
>CP026692.1|AVH73673.1|6251448_6251946_+|FAD-binding-molybdopterin-dehydrogenase
MQPFSYAKVTSEQVAIATVEQDKTAAFIAGGTDLLGLMKDGVQTANILIDINSLPLADIESQPQRIRIGAISRMSDVAFHPKIQECYPVISQALLQSASPQLRNIATVGGNLLQRVRCAYFRDPVFPCNKRIPGIGCSAITGYNRMHAIFAASEHCIAVHPSDLA
>CP026692.1|AVH73672.1|6249605_6250799_-|FAD-binding-monooxygenase
MNTNLTQKLSQPIVKKVAIVGAGPGGLATAIALISQGIEVQIYEKAQEFRPAGSGLGLAPNGLNSLDAIAPGIVETLKSSGCEVHHTVLKNIQSETIRTNATKYIEQYGQPLLTIWWYRLQQVLASRLPSDIIHLNHRCIGFEQDANGVEIHFDGKKSVDADLLIGADGVNSAIRETLFGEGKPNYIGSMCWRAVIKYRHELFNDYELVFVKGNQQFMYLLNVGGGYTSWISRKFSPEYSLSHSTNEVKSRILDELADWDKSFRVVVEATPAEEIWEGPICDRPPLTQWSQGRVTLLGDAAHPMAPAMGQGANTTFEDVYQLRECFSDSANLQEALTSYEQCRIERTKLIQARSALGEMRYYDINTLASTGQTQERQMSLNDDFHKWVYNFKPSVKS
>CP026692.1|AVH73671.1|6248672_6249182_+|hypothetical-protein
MRLPIILSATLLLSLGLNLTAMSETPADKAQCQTQTNNNLNSRRLRFNKRLWEQANISNYRITVSNSCFCIQDARGPVVIEVRNGQTTSITSVATGKPVNPQFFQKYDTIPELFNVIQDAINRKASNLDVEYNAKLGYPTKINIDYNSQIADEEIFLTIENFQELKTRR
>CP026692.1|AVH73670.1|6247566_6248415_-|hypothetical-protein
MSLDSRFLLDLPHIEAELTYFTPMAEKPVIYTYERPPGIPPSNRKFETHKVPIHNIRAVSQDISLDREGFRLVVAHSNVRNFYDEDEILRVYYPEAEQLLKEVTGATRVVIFDHTLRNAQRLQNGESGISEPIKHVHNDFTAKSGYTRARKELTAQRVDNIDELLQQRFALINIWRAIAPVSKSPLAVCNALSIAPIDLVASDIVYRDYAGESYLITYNPTHQWFYFPQMQPSEALLFKCFDSAEDGRARFPAHTGFDDPTSPPDAPARESIELRTLVFYPT
>CP026692.1|AVH73669.1|6246740_6247250_-|gluconate-kinase
MIILVMGVSGSGKTTIGKLLADSLEWKFNDADTFHSPENVEKMRRGIPLSEDDRMPWLQDLQTAIKHWLQEKKNVVLACSALKDSYRQFLVLDSDGSANAKGDRIKLVYLKGSYELIQMRLQERSNHYMSEKLLDSQFYTLEEPVDTLCMDIEQPPDKIVQNIRTALEI
>CP026692.1|AVH73668.1|6246278_6246602_-|protein-of-unknown-function-DUF1815
MFIRLAQQHQQFVQDLVMNLQALTIILERRGYTASCYTCGEQMKSASFMVSLKEKHLIRFLVSDYGITWMELWDDRELMKLEGAEAINQLQELANLVKYSTTVQLTN
>CP026692.1|AVH73678.1|6261563_6262184_-|hypothetical-protein
MTANLTPTATFDFVTVLSQAAVTYRQPQRIRPSAEILVKALLQAEKTAKQQRLTYPFEFLLGKWQLCFVTGTKKNKGSGGIVLGNGFYVPKFIAIHVSFNATLEQDSNIGEIANQVEFNPVSLKLTGPVQYFAKKNLLAFDFNQMIISLFGRVVYNRAIRAGKVQTEDFYNQPIAKLPFFGFFLVTEDFIAARGRGGGLAFWIRET
>CP026692.1|AVH73679.1|6263171_6264332_+|Crp-family-transcriptional-regulator
MNIEKFIQRTEILHKRLADLYQTASILPWISPDLLPEAFKELYNTSKIVQLAAEELYQQNEELVKTRNWLEGERHHYQDLFELAPDGYLVTNTEGIIQEANLTAAKLLNVAKHFLVGKPIVNFVPLEERQQVRNELIHLSQSDRVRELLVRLQQRHGESFDAALTVAVVRNHQGKAISLRWILRNITGRQHLAVKDDSEIFNQRLLHKYAKGETIALNPLVIWYVSQGFVKLSTYCETGEEVLIGLATAGMVFGSSLTSLNIYQATALADVELVPIYTVEVAASPTLSHTLLPKINQRLQQTESFLVICGRRRVQDRLYHLLQLLKREVGETVPEGTRLSVRFTHEDIASACCTTRVTITRLMGKLQEEGTIGFDLKKHIILRDVD
>CP026692.1|AVH73680.1|6264362_6265052_-|CAAX-amino-terminal-protease
MLKPNQNQNALLALLLLVPVPSIGITTQLYILPGFQGHLVALLSKIWLLVLPIIWLLFIDKENLKVEYPKRRDLLAGVGLGLLMLGIILIVYWLLGAKWIDVEYVRDRARQVGLNSFAIYLVGSGYWIFINSLLEEFVWRWFVYRKCEILVSSPLAIVLSALFFTIHHVVGLAAYFDWRATTLCSLGVFLAGAVWSWCYLNYCSIWPGYISHVFADIAIFLIGWQLIFA
>CP026692.1|AVH73681.1|6265748_6267299_+|glycerol-kinase
MADYAYAAFKAAMHTLGKKTPSSGYILALDLGTTGNRAFVFNADGKIVGQAYKELTQYYPQPGWLEHDPQEIWQDTFWVMQTAIENAQIAPSAIAALGLTVQRETCLIWDKTTGKSLHRAIVWQDRRTAPLCHQLQEQGYAEEIYDRTGLIIDAYFSASKLRWLLDNFTDIDLNNVLAGTIDSWVLWNLTGGKVHATDHSNASRTMLMNLKTCEWDENLLDLFQIPAHILPQIQTSLGVFGVTDATLLGAEIPITAILGDQQASLFGHGCDRPSLMKCTYGTGSFLVAHTGNRIVRSHHQLISTVAWTQANSRETLDVGYALEGSMFTSGACIQWLRDRLKLIKTAAETEAMANQVKDNGGVYFVPAFSGLGAPYWDMSARGAFFGITASVQPEHLVRAVLEAIAYQVLEVVQAINASCSTPVGRLTVDGGACENNFLMQFQADVLGIPVERPIMRDTTVQGAAFAAGLAVGFWQSYEALVEQRQIERVFEPRSDFPLSNFGIWQKAVKRTLAWEE
>CP026692.1|AVH73682.1|6267920_6269015_-|histidine-kinase
MFLPKTVKKDKILVVDDIFDNLLVLEAVLEDEDYEISLVEDSKIALAMVEESPPDIILLDVMMPELDGYEFTRRIRQNQALPFIPILLLTAHYESSVVEGLDAGADDFIRKPFDPDELHARVRSLLRLKHSIDERDQMANLRADFVSRFTHDLRIPLVASNRVLKLLLEGRFCDVSPQLQEIIDTMIGSNQDLLEMVNTLLEVYRHEAGCKTLKISPCNIQELVSEVSQELTPLAEEKGLAVNIDRGETASTIMGDRLELRRVLTNLIGNAIKFTDKGSVNIHCYLTSVAVNIDIQDTGPGISKPDQAILFERFRQGKHQRSGSGLGLYLSRCIIEAHQGTIDVTSEPGQGSTFTIRLPVAEEN
>CP026692.1|AVH73683.1|6269736_6270456_+|LuxR-family-transcriptional-regulator
MSEIKILVIEDHNLTRIGLRSALQTQAEFNIVGEAANATDGIRLLKTLKPDVATIDIGLPDMDGIELTRTFRQYQAENEDYTTKLLILTMQNSEQAVLAAFAAGADSYCMKDIETEKLVEAVQTTYAGSSWIDPAIADLVLQQIRQDFPDGNRGASGKRVLIEGIDPDTEKSIVSYPLTHREMDVLELIVAGCDNAEIAKRLYLTVGTVKTHVRGILNKLCVADRTQAAVRALRAGLVP
>CP026692.1|AVH73684.1|6270643_6272332_+|NAD(P)H-quinone-oxidoreductase-subunit-4
MIADQFPWLTAIVLLPLVASLLIPVLPDKDGKRVRWYALGVGIADFALMCYAFWKHYDASSASFQMVENYAWVPQLGFNWAVSVDGLSAPLVLLAGFVTTLSIFSAWQVDRRPRLFYFLMLVLYSAQVGVFVAKDLLLFFIMWEVELIPVYLLVCIWGGQRRRYAATKFLLYTAAASIFILVAALAMGLYGGGDMTFDITALAKKEYPLSLQLLLYAGLLIAFGVKLAVFPMHTWLPDAHGEASSPVSMILAGVLLKMGGYGLIRLNLELLPDAHIYFAPVLAILGVVNIIYGALNSFAQTNMKRRLAYSSISHMGFVLLGIASFTDLGINGAMLQMISHGLIASVLFFLAGVTYDRTHTMVMKDMGGIAQAMPKVFALFTIAAMASLALPGMSGFAGELSVFVGITSSDVYSSTFCTVTVFLAAVGVILTPIYLLSMLREVFYGQGAALICDINNAGSENQEDEGTVCFGTDCLVPEDAVYDDARPREVFIAACFLLMIIGIGFYPKMAMQMYDVKTVAVNANLRQSYAIVSQTNPQIYAEGFLVPQISEVEVAPVLGVIK
>CP026692.1|AVH73685.1|6272550_6273531_+|nuclease
MVESYQKNTEFLLLVKKHLSVIYADSYRDLETGKVIKVIDGDGLLVRKGEESLNIRLAYIDAPEHNQEYGLDSKKWLENQFSNTASVIAIRFIALDEKHGRHIADVFINGYSLSWLMVITGNAWAYYDFLTTEIEASYLDAQYFARKKYRLGLWTNNLFPTPPWIYRAEEKGEKISLLMEPNRTSRATLESMIKKSEDIQEKIIDLENRSEFNRNYCPMRYYEQVYLDQIQYTAIMCKGVDWDLKSGYNGVEGDEVNILFFQIAVKAAKGDEEAVYEYTAWKRALYKAVGKVHLPRYYEKRLTQEWVDTLIRRVENWIIKSSSVID
>CP026692.1|AVH73686.1|6273629_6274544_+|homoserine-kinase
MSVVSAITVTVPATTANLGPGFDCIGVALKLYNEFKFTRLEEGGLTIDITGTEAERVQTDENNLLYQAFVKFYQHIEQTPPTVKIEIKLGVSLARGLGSSATAIVGGLVAANQLEGTPMSQSQVMELAIAMEGHPDNVVPALLGGCRLAATSGAGWEICDVPWHKDVVPVVAIPDFELSTSKARSVLPTEVSRADAIFNTAHLGLLLRGLETGNGQWLKTALQDKLHQPYRKALIPGYDALNIAAVSAGAYGMVISGAGPTLLALVDKLHSKAVEAAMLAAWQEEGITAEVRSLSLDTQGAKSF
>CP026692.1|AVH73687.1|6274573_6275083_+|hypothetical-protein
MEQIQDEMAALNSQIQILLEERAALTINNVISGENDSPQAMVEAYRRQARENAQLSVELQGIDAAIAALEAQIKQKQTKLVRWQGESKELIQQQQLEEAKEVAQVHAQRINQLASELAAEVRFLKACANQLSPMYWQIYYKPFITGFKTISVPYVRSDGEVWTIVNRIV

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Crispr_ID: CP026692_31

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026692_31

6811429-6811504

Orphan

Consensus_repeat	Method
TTTGTCCTTTGTGAAAAACAATGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026692_31

>merge|CP026692|31|6811429-6811504|CRISPRCasFinder
TTTGTCCTTTGTGAAAAACAATGACTATAAACAGTCATTAGTCAAGTGTCATTTGTCCTTTGTGAAAAATAATGAC

>CP026692|31|29|6811429-6811504|CRISPRCasFinder
TTTGTCCTTTGTGAAAAACAATGAC	TATAAACAGTCATTAGTCAAGTGTCA
TTTGTCCTTTGTGAAAAATAATGAC

Protein	Signature genes	Signature genes Name	Protein_function
CP026692.1\|AVH74086.1\|6800994_6801561_+\|nuclease	unknown	unknown	gnl\|CDD\|224442
CP026692.1\|AVH74091.1\|6805321_6807904_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|225113
CP026692.1\|AVH74104.1\|6838656_6839688_+\|phospholipid/glycerol-acyltransferase	unknown	unknown	gnl\|CDD\|153249
CP026692.1\|AVH74103.1\|6828325_6831211_+\|excinuclease-ABC-subunit-A	unknown	unknown	gnl\|CDD\|234734
CP026692.1\|AVH74102.1\|6825857_6827105_+\|alpha-L-fucosidase	unknown	unknown	gnl\|CDD\|214829
CP026692.1\|AVH74093.1\|6809037_6810009_-\|cobalamin-biosynthesis-protein-CobD/Cbib	unknown	unknown	gnl\|CDD\|234919
CP026692.1\|AVH74099.1\|6820236_6821856_-\|PMT-family-glycosyltransferase	unknown	unknown	gnl\|CDD\|224720
CP026692.1\|AVH74096.1\|6811545_6813435_-\|voltage-gated-chloride-channel-protein	unknown	unknown	gnl\|CDD\|238233
CP026692.1\|AVH74105.1\|6840449_6841166_-\|PhoB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223816
CP026692.1\|AVH74087.1\|6801656_6802538_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
CP026692.1\|AVH74100.1\|6822464_6823634_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH74097.1\|6813910_6814297_+\|hypothetical-protein	unknown	unknown	unknown
CP026692.1\|AVH74095.1\|6810976_6811390_+\|AbrB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|372980
CP026692.1\|AVH74098.1\|6815032_6819466_+\|nitric-oxide-synthase	unknown	unknown	gnl\|CDD\|376957
CP026692.1\|AVH74101.1\|6823647_6824955_-\|recombinase	unknown	unknown	gnl\|CDD\|224872
CP026692.1\|AVH74094.1\|6810066_6810507_-\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
CP026692.1\|AVH74089.1\|6803016_6803262_-\|CopG-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223932
CP026692.1\|AVH74090.1\|6804612_6805275_+\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|235544
CP026692.1\|AVH74088.1\|6802691_6803030_-\|growth-inhibitor-PemK/toxin-MazF	unknown	unknown	gnl\|CDD\|367091
CP026692.1\|AVH74092.1\|6808399_6808936_-\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235365

Protein	Function_ID	Function_description	E-value
CP026692.1\|AVH74086.1\|6800994_6801561_+\|nuclease	gnl\|CDD\|224442	COG1525, COG1525, Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair].	6.58013e-28
CP026692.1\|AVH74091.1\|6805321_6807904_-\|GAF-domain-containing-protein	gnl\|CDD\|225113	COG2203, FhlA, FOG: GAF domain [Signal transduction mechanisms].	9.38273e-27
CP026692.1\|AVH74104.1\|6838656_6839688_+\|phospholipid/glycerol-acyltransferase	gnl\|CDD\|153249	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.	2.33233e-27
CP026692.1\|AVH74102.1\|6825857_6827105_+\|alpha-L-fucosidase	gnl\|CDD\|214829	smart00812, Alpha_L_fucos, Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.	1.67277e-116
CP026692.1\|AVH74093.1\|6809037_6810009_-\|cobalamin-biosynthesis-protein-CobD/Cbib	gnl\|CDD\|234919	PRK01209, cobD, cobalamin biosynthesis protein.	5.23466e-128
CP026692.1\|AVH74099.1\|6820236_6821856_-\|PMT-family-glycosyltransferase	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	5.2836e-69
CP026692.1\|AVH74096.1\|6811545_6813435_-\|voltage-gated-chloride-channel-protein	gnl\|CDD\|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	4.57031e-106
CP026692.1\|AVH74105.1\|6840449_6841166_-\|PhoB-family-transcriptional-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.7692e-86
CP026692.1\|AVH74087.1\|6801656_6802538_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	9.16641e-90
CP026692.1\|AVH74103.1\|6828325_6831211_+\|excinuclease-ABC-subunit-A	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
CP026692.1\|AVH74095.1\|6810976_6811390_+\|AbrB-family-transcriptional-regulator	gnl\|CDD\|372980	pfam14250, AbrB-like, AbrB-like transcriptional regulator. This family of DNA-binding proteins is likely to act as a transcriptional regulator. This family does not include E.coli AbrB, which belongs to pfam05145.	3.58408e-40
CP026692.1\|AVH74098.1\|6815032_6819466_+\|nitric-oxide-synthase	gnl\|CDD\|376957	pfam02898, NO_synthase, Nitric oxide synthase, oxygenase domain.	0
CP026692.1\|AVH74101.1\|6823647_6824955_-\|recombinase	gnl\|CDD\|224872	COG1961, PinR, Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair].	1.80406e-23
CP026692.1\|AVH74094.1\|6810066_6810507_-\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	1.7923e-44
CP026692.1\|AVH74089.1\|6803016_6803262_-\|CopG-family-transcriptional-regulator	gnl\|CDD\|223932	COG0864, NikR, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain [Transcription].	3.81101e-05
CP026692.1\|AVH74090.1\|6804612_6805275_+\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|235544	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed.	1.04009e-104
CP026692.1\|AVH74088.1\|6802691_6803030_-\|growth-inhibitor-PemK/toxin-MazF	gnl\|CDD\|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	1.68931e-34
CP026692.1\|AVH74092.1\|6808399_6808936_-\|uracil-phosphoribosyltransferase	gnl\|CDD\|235365	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR.	4.02353e-93

>CP026692.1|AVH74095.1|6810976_6811390_+|AbrB-family-transcriptional-regulator
MPKQKKIEPLLGEELLKKVKELENESKEDKAKKCGYYTVTKNGIERVNMMKFLNALIDAEGIQLDSTPSANGRGGRSASYRISVQSNGNLLIGSAYTKQMNLKPGDEFLITLGKKHIRLRQVDPEDREDDEAIEATA
>CP026692.1|AVH74094.1|6810066_6810507_-|Rrf2-family-transcriptional-regulator
MKLTTRGHYSVKALLDLSLQPRYGPVSVRTIAKRQDIPAPYLEKLLIEMRRASLVKSIRGSIGGYQLAREPAQISIGQILEAVGETSHLPHHTPAPTQAEDWVTFSLWQRLNQKVKEALYSITLADLYYDARSWQASLGEEASFVV
>CP026692.1|AVH74093.1|6809037_6810009_-|cobalamin-biosynthesis-protein-CobD/Cbib
MTNNIYILIIAAFLDYLIGDPWDWPHPVQVMGWVISRLTKFFLHLCQNSLTQRLAGILLGIILIIGSGLVGFLIIQIARWVHPLLGIAIDSILLASCFAGRSLRAAAEAVLQPLTVGDLEKARKILSNYVGRDTQNLSQAEISRAILETVAENATDGVMAPLFYAIVGVFIPVVGPTPLALAYKASSTLDSMVGYREAPYTYLGWFCARLEDCLTWLPCRLTVVTLSLLSGKPMHIWQICRRDAINDPSPNSGWSECAYAAFLGVQMGGTNWYRGVAKYKPLLGDAIYAITTSSIQNALQLTRYCFLLWLGIAIAIFLMLANR
>CP026692.1|AVH74092.1|6808399_6808936_-|uracil-phosphoribosyltransferase
MSAKVVEILSSEEIRRTLTRLASQIVERTRDLSQLVLLGIYTRGALLAELLARQIETLEDVAVSVGALDITFYRDDLDKIGLRTPTKSEIPFDLTGKTVVLVDDVIFKGRTIRAALNAVNDYGRPEVIRLAVLVDRGHRELPIHPDFIGKKLPTAKEEIVKVYLQNCDGRDAVELIAD
>CP026692.1|AVH74091.1|6805321_6807904_-|GAF-domain-containing-protein
MSQSFSQNQAKRNRQQRLWQQKWSLKTKAIVWALSISVLPVVAIGTATYNYGTNLINTEIPQVRLESTKSLTESELALQRELSLLLAGMGVTAILAGAIAVFVANRVINRVRKAAATSNIIKNKLRPDSEFTQSFIASQDELVMLESNINLFTEMISGLLQQKEAEADYSQLSIKITRWVRESFNEEDVLKTTSEEIRKALSIDRVTIFCFNSNCNGTFITESVAPGLPKMLGVTVSNTGFEAGYIEKYQNGCIRAIDDIYQANLSDGDIELLEQFAVKSNLVAPILKGKQLFGLLIAHQCSRVRFWQQSEINLFAHIAIQVGFALDYARLLKQVDSKADRAQVFIETTRSIRQSLNEEDVLKTTVEEVRKVLSTDRVLVYSFNANWVGTVIAESVVPGYPKVLRTEIQDICFTQGYIEKYQSGRVQATNNIYEAGLTDCHINLLESFAVKANLVAPILKDEHLFGLLIAHQCSRPRDWQKPEIDLFAQIAMQVGFALDHARLLQRIDAEGVQSRLLADTIGSIRQSLNEEDVLKTTVEEVRKVLGTDRVLVYSFNADWSGIVIAESVVLTYPKVLQAEIRDPCFGQGYVEQYQSGRVLAINNIYEIGLADCHISLLESFAVKANLVAPIIKDKQLFGLLIAHQCSKPRDWQQSEIDLFAQIAMQVGFALDHARLLQRIEAERMRSQLLVDIIRKIRQSLNEEDVIKTTVEEVRKALSTDRVLVYSFYANWFGIIIAESVVPGYPKVLRSKIHDPCFTQGYVEKYQSGRVMAINNIYESSLADCHIKLLESFGVKANLVAPIIKDEQLFGLLIAHQCSEPRDWQQSEIDLFTQIAMQVGFTLDHARLLQAYQTAEANSDE
>CP026692.1|AVH74090.1|6804612_6805275_+|phosphoribosylglycinamide-formyltransferase
MTLCPDSTLSLISPRISNICQQIAPLKLGIMASGNGSNFDVVAEAIQDGQLNAQIQVLIYNNPSAKAAVRAANRGVETVLLNHRNYQNREEFDEQIVQTLQRYDVEWVILAGWMRLLTSIFIDAFPERIINIHPSLLPSFKGIHAVEQALASGVKITGCTVHIACLEMDSGPILMQAAVPVLPDDTAETLHARIQIQEHRILPLAIALAAYSSKVTLSLS
>CP026692.1|AVH74089.1|6803016_6803262_-|CopG-family-transcriptional-regulator
MLLIGTKMNVEKLSISLPPFLVEFVENYKQNKGCKSRSQVIEEALELLRNRELEVAYREASAEVDNDWNVTVADGLTDETW
>CP026692.1|AVH74088.1|6802691_6803030_-|growth-inhibitor-PemK/toxin-MazF
MKRGDIYYANLSPTMGSEMGKRRPVLIVSNDISNSAATTVTILPITSNVSRVYPFEVLLNPEVSGLTKPSKVQAQQVRTISKQRITGEVLGSLNEDMMVLIDAALKLHLGLV
>CP026692.1|AVH74087.1|6801656_6802538_-|sugar-ABC-transporter-permease
MPKIYTKSWLDNDTVAAWIFLTPALILLGVFIIWPIAYLFYLSFTAGSFTLKGIYWIGLKNYWRLLLNPDFWQVLGNTFYFTVATIIPSLVISLGLAVLLNRSIPLRGILRSAYFLPSIISIVAAGLGFRWLFQTSGPVNGLLVFFGISDIPWLGDTFWAMPIIILMSIWKQLGFNMVVFLAGLQTIPPSRYEAADLDGANAWQQFWYITLPGLRPTVIFAIITTAIFTLRSFEQIYVMTGGGPLNSTNLLVYYIYQEAFGQFDFGYAAAGATVLLAATLVLVYLQLQTWGEE
>CP026692.1|AVH74086.1|6800994_6801561_+|nuclease
MEKLTKPVRFWLCATIIILNLIGCDRFIGNSGEPVERVSDGDTLVVKDTDGKNLTVRFACVDAPEIAHTNKEKQSKRISDRNQFTWGVKARERVQQLVQQGGSRVTLNITDSDRYGRKIAEVRLKNGTFVQQVLLQEGLAKVYRPYLNKCPSKDLVQKAETEAKAQRLGVWSDTKFINPWEYRSLYKK
>CP026692.1|AVH74096.1|6811545_6813435_-|voltage-gated-chloride-channel-protein
MTLLPPTQLRKVTEQPAFPTPSAHLAHLINRFQPSPETVVLFLAMLIGGGTAMGVVTFHYLIQLIHQLMLENLMGQIGVWGAWTLACVPTLGGLIVGLLRWRTQDFGPGLSSLIAASQGTEIRRPLRPVTKMLAASVSLGSGASLGPEGPSVEIGANFGMLFSVILNVSQERQRLLLGAGAAAGLAAGFNAPIAGVFFALEVVIGATSFATSAVSVVLLAAVVAALIAQICLGAQPAFDLPVYQVRSPLELPLYLGLGLGASLVSLAYTQSIRLAKACFAGKVPGFDFLGRIPQPIHPIIGGAIIGAVALHFPQILGVGYETVEAMLQDVEFPLYLLVVLLVVKLLMTAISAGSGFIGGLFAPAMFLGASFGSAYAKMLAVAFPTICDQMAAPPAYAMVGMAAVLAASVRAPLTSILMLFELTRDYRIVLPLMAAVGLSVWLVERIKPTFNSNSNLQQIGLSELKDEQAEIVQQILVEDAMYPCPKKLPATLGVLDAAVEMIRDRVRSALVFDQAEQLVGILSLEDINRALAIWQTYPNSLTEIPDNLSSQTLIDICTTEILYAWQDELLSEALDRMSLRGLHQLPVVARDKPDRILGLLEKEQIALTCNLAVTRKALRHYYQSYPLQI
>CP026692.1|AVH74097.1|6813910_6814297_+|hypothetical-protein
MNIHTFDNHYVTCPICQRNATPKPVKTRMGLFCCPYCQERLVVCQSGHYVRDPFTWRQLMMSSSLRRQSRPLARIIRDFVLLKRPMVALAVGSAIFFGAIALTQEKTSYDRQILPTTEKVNEPGNKSQ
>CP026692.1|AVH74098.1|6815032_6819466_+|nitric-oxide-synthase
MNDNQRIIHLTEISALDFPADNNYKYKCHLQVVSEEGQSLLERDLLNRTQPSWLVDLKNKGDCTIAITLRYREGDITQPWQDAGTVAFATQECLNGERSAELEFPITTWNQAPQLKLKTRLTQSSTEGSSSSFTILGNQNGTRRTHSKGTHTEGEFEMPESVPLSPQEEVIVKDAWNKLRAWKELQMEKFLKRLLLESPELEYIFGEAINSINDFFFELFDCCVHQLQPETQNVIGEPLMGVPPEKGDSFDTVEDYGALFADIGMRPQHWLKARQVWMWMLPSIPYLEEYDHQDLAKGANSALYRFFNTHVIVPMVEAVHRYNTALPPEMLQKMMESWQVFSQNKQVMGMEFYQILFEKYPFVLPIFGRADMDYLSLHLFQALEFLVQSLRSGSSDEMIRELRFLGQVHTSAGVPSCAYPAMNDAIFTLFERHVPDFTPELRKGWQTLIDRAVNVIKLPKLNEERLLKKAKQYLELIATEQAWEPEDKARRWAEIQEEVHATGTYTHTYEEVAYGAQVSWRNASKCVGRIQWNNMVIRDRRHVSDPDEMFRELQEHLQSATNGGNLQITMTVFRPKHPKERWGPRIWNPQLARYAAYEQPDGRILGDPANLDVTKAIIKLGWQPPQPLTEYDILPLVIEAPGMEPKMYHWDRDEILEVEIEHPAIPEFKSLGFRWYAVPAITNFSMHVGGINYACIPFNGWYMGTEIMRDFLDEYRYNKMEDIAKVLKLDTSSEQTLWRDRVALELNVAILYSFQKAKVTMVDHQSASRQFLAHDLREKKAGRECPGDWGWVVPASGGSACPVWHHQMRDFYLEPAYHHAADRWAVEDGIDLEKFITTIDEDDNKQDRILILYASETATAEGLARKAARQLQRFRPQVMALDEYNTDTLASEKLLLIVTSTFGNGEIPGNGKKFLQWLKKQPARSLDGLNYSVLGIGSTVYENFCAAGISVDKGLAKAGGNCIVPLHKGDEIKGQADTFKQWLGLVSRILGEDATSADATAQAAPKLNVTFLSETEAANISPVKVSGDRGVEVPLVANSELLKEVIPGSRSTRYLVFDISGSDLQYETGDHLAVYPGNPAELVNQLCDRLSVSPNTYFTARYLMPDGTELEEKPPVSVPTSIGQVLLEDLDLTLREPFNDVLTYLYSAAQNPQDKQRLETWLEILRQGDEHPDSITLKKTITDNFISVVDLFNEFPSAQITLEVLLELLPKQKPRLYSISSCPLLHPQHIQITVGVLQVKTDAGKTRQGLCSNYLAGLEAGAKVRISVRTSSFRPPTDPLAPMLMVGPGTGVSPLIAFLQYRQVLLQQETQLGDACLYFGCRDRSDFLYGEQLVSWQNQGVLSGLEVAFSRLNDKKVYVQGLMQEKAEELWRILSHPQCHYYVCGDAKMADDVFEVFMAIAKTEGGLSHIEAVSFFNKMKQEKRFFSDVWGVVLHFKEAIKEVQHDNYSKAEKWLERVQDSADSQAAVQEELQLLTI
>CP026692.1|AVH74099.1|6820236_6821856_-|PMT-family-glycosyltransferase
MQEGSFIWSHLEKQHRTVGKWIDWVWLIVLLLAAVLLFSINLGGLPLRDWDEGTVAQVAREIWHAPAGSMPWLYPTLGGEPYHDKPPLMHLLIAWAYSLGGENELTTRLPGAILTATSVPLLYCIAREIFRQRWAAIYSALIYLTMLPVVRHGRLAMLDGAMVSFLMVMMLCVLRSRRDLRYCLGVGVSFGFICLTQGLLGVLLGAIALVFLFWDTPRLLTCYYLWIAILIGILPVAAWYSAQLIHYGYIVAQIGLANPSTGRLGSVLEGNSEPPWYYVIELLKYTWPWLLFLPQTVRLTWENRNLSWAKLVMAWSGVYLLVISFMITKVPWYLFPIYPSLALAFGIQLSDTENSPLLSSYPRAWVAGLAILAVAASAGSIYFSAGTTPKTDLQLIFAAVALTMTLAAILAERGDGQFLKILFWGSYISLLLLMKSNYWVWELSEAYPVKPVAAMIVRANPATRKIYTSFPYHRPSLDYYSDRTIIPASVGELEYYWHYNGQPYFLLHASAFNNLELESMKLVDQAEGWKLVTKDTNRL
>CP026692.1|AVH74100.1|6822464_6823634_+|hypothetical-protein
MNLPVVVDVTLGLVFIYLILSLLASEIQELIATLLQWRAKHLRTSIELLLSGGSESEKSDIINAIHLVQKLYNDPLINTLNHQAKGKIEKHFQEITKNPDKRILEKQSGPSYLPSETFATTLLDTLKIPQLINHVKYPSEEAKTNLHMILASYKELKKGINDPTSPSYTKIQEIYGEIDQKFIDFVNNELPDEVPNNLIKSLSVIAQRSRIKIGDLTEEANQFKNEVETWFDRSMDRASGVYKRNAKGVAILIGISVAFLTNTDTFHLLKRLSEDSVIRSTITQSASQRIDYINNETDRRNIEKLLGNSSIPIGWQNINQQFELLDPTKSNRVYIRISQVFKLICGWIVSGFAIAMGAPFWFDILNKIINVRNAGPKPVAYTKDQPSQK
>CP026692.1|AVH74101.1|6823647_6824955_-|recombinase
MKIIAYSYTDPLLESSPDRADWGWEVDRVYEDLGKPDSSERSQLQQLFTDCQTEPADYLLIRRLEELGDTVEEISHRLNQLEVMGIAVIATEQPYTSENYPLGADLLNLLHAIQRQQRSRRIRQGHARNRLEVAPPPGKVPYGYRRGKGKYTIDRSTSPVVKDFFEHFLLYGSLRGSVRYLAKKYGKKISVTTGRRWLTNPVYRGNTAYQNGEIISNTHIPIISKEEAAQVDRLLRRNSRLPSRTASAPRSLAGLVVCAECQSHLTVTRVTQRNQDKEYLYLRSTSCPQSPKCKAISYQEVLEHTIETVCRDLPLAVAGMNFPQLDAVKNSLGQAIARQQEILAQLPALIETGILDAQTAKLRAYKLRTEISALEAKLATLPPVNLRSVAQAVSIPQFWLDLSETERRFYFREFIRQIDITLQDKELKLQVIFIF
>CP026692.1|AVH74102.1|6825857_6827105_+|alpha-L-fucosidase
MMNNWFDTARLGMFIHWGHSSQQGCELSWPLVGGVFSLPFCKDIPVEKYHYTANTFNPQQYNPQEWADLAKSIGMKYAILTAKHHNGFALFHTQESNFSIASAPYKKDIVREYIEAMRSVGLRIGLYFSLSDWHHPDYPAFTEADKPYRFDQLPQPTAQQWERYIQFMFNQIRELLTNYGQIDIIWFDGSWERTPEQWQAQELAKMIRDLQPNILINDRLPNCGDFETPEQFIPPHPPDHPWETCLTINESWGYNSDDCNFKSSRQLIHTLCEVAGKGGNLLLNVSPMGNGQIPPEQLERLKYIADWMGSHSESILDTTPGLEPWQFYGPSTRKGDRIYLHLLMKPYETISVRGIPIKQVKSVFVLADGTALSYTTRCAIIDSIFNSNPLGELTIDVPESVINPYVTVICIDIDS
>CP026692.1|AVH74103.1|6828325_6831211_+|excinuclease-ABC-subunit-A
MSDQQLAASLNGHLPYPSHNSQNTIRIRGARQHNLKNIDLELPRDRLIVFTGVSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQLDKPDVEAIEGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLFGRAGEPHCPICDRCIAPQTIDEMCDRIMELPDRTRFQILAPVVRGKKGTQRKLLSSLASQGFVRVRVNSEVRDLSDSIELDKNFTHTIEVVIDRLVKKADIQERLVDSLSTCLKQSGGIATILVSLLGDDGQEKEEELVFSENFACPEHGAVMEELSPRLFSFNSPYGACPHCHGIGTLRRFSPDLVVPDPEAPVYAAIAPWSEKDNSYYLELLYSVGQIYGFELQTNWSKLTEEQQQTILYGEKEETTKTDKKQNFKGTIPILQRQYEGGSELIKQKLEQYLIDQPCEVCQGKRLKPEALAVKLGQYGILELTGVSIRDCRERIEQFKLSDRQLQIADLVLREIKARLQFLLDVGLDYLTLDRPAMTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNNRLLKTLTKLRDLGNTLIVVEHDEETIRAANYIVDIGPGAGIHGGNIIAQGDFQALLAAEDSLTGAYLSGRRVINTPAERREGNGRSLGIKNAHCNNLRNIDVEIPLGKLVSITGVSGSGKSTLINELLYPSLQHHLTKKVPLPRHLDKIQGLNAIDKAIVIDQSPIGRTPRSNPATYTGIFDAIRDVFSQTVEAKARGYKPGQFSFNVKGGRCEACSGQGVNVIEMNFLPDVYVQCEICKGARYNRETLQVKYKDKSISDVLRMTVEESLDFFQNIPKAIARLQTLFDVGLGYVQLGQPATTLSGGEAQRVKLATELSRRATGKTLYLIDEPTTGLSFYDVHKLLDVLQRLVDKGNSILVIEHNLDVIRCSDWVIDLGPEGGDKGGELIAVGTPEEVAKNPRSYTGQYLQQVLKQYPAMRK
>CP026692.1|AVH74104.1|6838656_6839688_+|phospholipid/glycerol-acyltransferase
MINQHSENLLNSQLENAPGEGYIFNWFDWFCLWYPSGWLILFNRHWQYYHTDPDGWNWLEYGLFLIPGGFYLALLSRWLRLGFRSPRKEVGEFDSKYQQAFRKEILGPIVKYYFRGELQQVENLPPIGPLIVAMNHAGMCFPWDFLTLGYLLSEAKGWVVQPIANPVLFEHPWVNWWLPPQWSQVLGGVRAELNDFESAIAQGKTLLYAPEGIRGPLKGWRRRYQLEKFDVSFIQLSDRYHIPILPVVCIGSESLHPWAINFTKLQRLVKLPFLPLSPLMFALLLFPSMGVWAMRTRLRYFIGPLQPAGLDNHSKQGRAAAYQQAQQLREKLQLQINQFLGKS
>CP026692.1|AVH74105.1|6840449_6841166_-|PhoB-family-transcriptional-regulator
MLTTSSMRILLVDDEVELTQPLSRLLTREGYAVDAVYDGTSGSELAQAGSYDLLILDWMLPGKTGLEICQELRRQSKTTPVLFLTAKDTLDDRVQGLDAGADDYLVKPFELRELLARVRALLRRSGSQTYETTTGRLTVADLELDSENQVAYRQGRIIELSQKESQLLQYFMEHTGQLLTHAQIMQNLWQESELPSSNVIAALIRLLRRKIEVGKETALIHTVYGKGYRFGASSVESV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP026692_8	8.3\|1722824\|18\|CP026692\|CRT	1722824-1722841	18	CP026692.1	1722848-1722865	0	1.0
CP026692_24	24.1\|4963919\|24\|CP026692\|CRISPRCasFinder	4963919-4963942	24	CP026692.1	2652308-2652331	0	1.0
CP026692_8	8.2\|1722776\|30\|CP026692\|CRT	1722776-1722805	30	CP026692.1	1722716-1722745	1	0.967
CP026692_8	8.3\|1722824\|18\|CP026692\|CRT	1722824-1722841	18	CP026692.1	1722716-1722733	1	0.944

1. spacer 8.3|1722824|18|CP026692|CRT matches to position: 1722848-1722865, mismatch: 0, identity: 1.0

tggtgtagacatcggtgt	CRISPR spacer
tggtgtagacatcggtgt	Protospacer
******************

2. spacer 24.1|4963919|24|CP026692|CRISPRCasFinder matches to position: 2652308-2652331, mismatch: 0, identity: 1.0

gttccccccatgaggaactgccgt	CRISPR spacer
gttccccccatgaggaactgccgt	Protospacer
************************

3. spacer 8.2|1722776|30|CP026692|CRT matches to position: 1722716-1722745, mismatch: 1, identity: 0.967

tggtgtagccatcggtgtagacattggtgt	CRISPR spacer
tggtgtagccatcggtgtagacatcggtgt	Protospacer
************************.*****

4. spacer 8.3|1722824|18|CP026692|CRT matches to position: 1722716-1722733, mismatch: 1, identity: 0.944

tggtgtagacatcggtgt	CRISPR spacer
tggtgtagccatcggtgt	Protospacer
******** *********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP026692_24	24.1\|4963919\|24\|CP026692\|CRISPRCasFinder	4963919-4963942	24	NZ_CP047244	Trichormus variabilis 0441 plasmid unnamed2, complete sequence	46832-46855	3	0.875
CP026692_24	24.1\|4963919\|24\|CP026692\|CRISPRCasFinder	4963919-4963942	24	NC_007412	Trichormus variabilis ATCC 29413 plasmid C, complete sequence	192693-192716	3	0.875
CP026692_26	26.8\|5817903\|24\|CP026692\|CRT	5817903-5817926	24	NC_015314	Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence	101926-101949	3	0.875
CP026692_26	26.8\|5817903\|24\|CP026692\|CRT	5817903-5817926	24	NC_028998	Phormidium phage MIS-PhV1B, complete genome	19989-20012	3	0.875
CP026692_26	26.8\|5817903\|24\|CP026692\|CRT	5817903-5817926	24	KF437907	Phormidium phage MIS-PhV1A, complete genome	22540-22563	3	0.875
CP026692_26	26.15\|5818194\|24\|CP026692\|CRT	5818194-5818217	24	NC_015314	Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence	101926-101949	3	0.875
CP026692_26	26.15\|5818194\|24\|CP026692\|CRT	5818194-5818217	24	NC_028998	Phormidium phage MIS-PhV1B, complete genome	19989-20012	3	0.875
CP026692_26	26.15\|5818194\|24\|CP026692\|CRT	5818194-5818217	24	KF437907	Phormidium phage MIS-PhV1A, complete genome	22540-22563	3	0.875
CP026692_25	25.1\|5535153\|27\|CP026692\|CRISPRCasFinder	5535153-5535179	27	NZ_AP017296	Nostoc sp. NIES-3756 plasmid pNOS3756_1, complete sequence	405333-405359	4	0.852
CP026692_25	25.1\|5535153\|27\|CP026692\|CRISPRCasFinder	5535153-5535179	27	NZ_CP014688	Acetobacter persici strain TMW2.1084 plasmid pAC1084_1, complete sequence	130821-130847	4	0.852
CP026692_26	26.8\|5817903\|24\|CP026692\|CRT	5817903-5817926	24	NC_021909	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence	450936-450959	4	0.833
CP026692_26	26.15\|5818194\|24\|CP026692\|CRT	5818194-5818217	24	NC_021909	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence	450936-450959	4	0.833
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	NC_017804	Borreliella garinii BgVir plasmid lp54, complete sequence	59729-59760	5	0.844
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NC_015417	Clostridium botulinum BKT015925 plasmid p1BKT015925, complete sequence	52404-52434	6	0.806
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	MK250021	Prevotella phage Lak-B2, complete genome	177466-177496	6	0.806
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	MK250024	Prevotella phage Lak-B5, complete genome	171474-171504	6	0.806
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	MK250028	Prevotella phage Lak-B9, complete genome	176357-176387	6	0.806
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	MK250023	Prevotella phage Lak-B4, complete genome	177369-177399	6	0.806
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	MK250025	Prevotella phage Lak-B6, complete genome	174667-174697	6	0.806
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	MK250022	Prevotella phage Lak-B3, complete genome	174682-174712	6	0.806
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	MK250027	Prevotella phage Lak-B8, complete genome	177580-177610	6	0.806
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	MK250026	Prevotella phage Lak-B7, complete genome	177585-177615	6	0.806
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	MK250020	Prevotella phage Lak-B1, complete genome	176337-176367	6	0.806
CP026692_21	21.1\|4243375\|28\|CP026692\|CRISPRCasFinder	4243375-4243402	28	NZ_AP022558	Geobacillus subterraneus strain E55-1 plasmid pGspE55-1, complete sequence	34652-34679	6	0.786
CP026692_25	25.1\|5535153\|27\|CP026692\|CRISPRCasFinder	5535153-5535179	27	NC_014718	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence	179820-179846	6	0.778
CP026692_25	25.1\|5535153\|27\|CP026692\|CRISPRCasFinder	5535153-5535179	27	NZ_CP050441	Tolypothrix sp. PCC 7910 plasmid unnamed1, complete sequence	35960-35986	6	0.778
CP026692_25	25.1\|5535153\|27\|CP026692\|CRISPRCasFinder	5535153-5535179	27	MH509446	Gordonia phage DelRio, complete genome	28423-28449	6	0.778
CP026692_25	25.1\|5535153\|27\|CP026692\|CRISPRCasFinder	5535153-5535179	27	MK359319	Gordonia phage Parada, complete genome	27415-27441	6	0.778
CP026692_25	25.1\|5535153\|27\|CP026692\|CRISPRCasFinder	5535153-5535179	27	MK376958	Gordonia phage Brylie, complete genome	27415-27441	6	0.778
CP026692_25	25.1\|5535153\|27\|CP026692\|CRISPRCasFinder	5535153-5535179	27	MH399781	Gordonia phage Nadeem, complete genome	27415-27441	6	0.778
CP026692_25	25.1\|5535153\|27\|CP026692\|CRISPRCasFinder	5535153-5535179	27	MK279893	Gordonia phage WheatThin, complete genome	27415-27441	6	0.778
CP026692_25	25.1\|5535153\|27\|CP026692\|CRISPRCasFinder	5535153-5535179	27	NC_031247	Gordonia phage BetterKatz, complete genome	27677-27703	6	0.778
CP026692_25	25.1\|5535153\|27\|CP026692\|CRISPRCasFinder	5535153-5535179	27	MK305885	Gordonia phage Mulch, complete genome	27415-27441	6	0.778
CP026692_10	10.16\|1928277\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1928277-1928310	34	MN694456	Marine virus AFVG_250M1118, complete genome	45243-45276	7	0.794
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	MK448664	Streptococcus satellite phage Javan99, complete genome	6656-6687	7	0.781
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	NZ_CP011027	Pseudoalteromonas arctica A 37-1-2 plasmid unnamed, complete sequence	47470-47501	7	0.781
CP026692_25	25.1\|5535153\|27\|CP026692\|CRISPRCasFinder	5535153-5535179	27	NC_003240	Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120beta, complete sequence	33444-33470	7	0.741
CP026692_5	5.1\|971145\|34\|CP026692\|CRISPRCasFinder,CRT	971145-971178	34	AP022644	Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence	201837-201870	8	0.765
CP026692_5	5.1\|971145\|34\|CP026692\|CRISPRCasFinder,CRT	971145-971178	34	NZ_CP018741	Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence	190290-190323	8	0.765
CP026692_5	5.1\|971145\|34\|CP026692\|CRISPRCasFinder,CRT	971145-971178	34	NZ_CP020744	Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence	179955-179988	8	0.765
CP026692_5	5.1\|971145\|34\|CP026692\|CRISPRCasFinder,CRT	971145-971178	34	NZ_CP016590	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence	198147-198180	8	0.765
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NC_007581	Clostridium phage c-st, complete genome	157246-157279	8	0.765
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	AP008983	Clostridium phage c-st genomic DNA, complete genome	157246-157279	8	0.765
CP026692_13	13.24\|2392769\|33\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	2392769-2392801	33	NC_022536	Rhizobium sp. IRBG74 plasmid IRBL74_p, complete sequence	124427-124459	8	0.758
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	NZ_CP013204	Paenibacillus sp. IHB B 3084 plasmid pHD01, complete sequence	111227-111258	8	0.75
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	NZ_CP042244	Crassaminicella sp. SY095 plasmid pCT01, complete sequence	19505-19536	8	0.75
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	KJ019089	Synechococcus phage ACG-2014j isolate Syn7803US23, complete genome	30138-30169	8	0.75
CP026692_3	3.18\|893500\|36\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	893500-893535	36	NZ_CP007647	Lactobacillus salivarius strain JCM1046 plasmid pMP1046A, complete sequence	156090-156125	9	0.75
CP026692_3	3.18\|893500\|36\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	893500-893535	36	NZ_CP020859	Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence	105526-105561	9	0.75
CP026692_3	3.18\|893500\|36\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	893500-893535	36	NZ_CP017108	Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence	69656-69691	9	0.75
CP026692_3	3.18\|893500\|36\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	893500-893535	36	NZ_LT604075	Lactobacillus salivarius isolate LPM01 plasmid II	88228-88263	9	0.75
CP026692_5	5.1\|971145\|34\|CP026692\|CRISPRCasFinder,CRT	971145-971178	34	NC_010933	Bacillus cereus strain G9241 plasmid pBC210, complete sequence	17128-17161	9	0.735
CP026692_5	5.1\|971145\|34\|CP026692\|CRISPRCasFinder,CRT	971145-971178	34	NZ_CP009591	Bacillus cereus G9241 plasmid pBC210, complete sequence	146538-146571	9	0.735
CP026692_5	5.1\|971145\|34\|CP026692\|CRISPRCasFinder,CRT	971145-971178	34	NZ_CP009940	Bacillus cereus strain 03BB87 plasmid pBCX01, complete sequence	170448-170481	9	0.735
CP026692_8	8.2\|1722776\|30\|CP026692\|CRT	1722776-1722805	30	KJ621082	Dinoroseobacter phage DFL12phi1, complete genome	40247-40276	9	0.7
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NZ_CP039717	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence	54906-54939	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NZ_CP037875	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence	95470-95503	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NZ_CP039559	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence	54630-54663	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NZ_CP026186	Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-3967, complete sequence	360281-360314	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NZ_CP028549	Klebsiella variicola strain WCHKP19 plasmid p1_020019, complete sequence	174548-174581	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NC_011282	Klebsiella variicola strain 342 plasmid pKP187, complete sequence	158955-158988	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NZ_CP024507	Klebsiella pneumoniae strain KSB2_1B plasmid unnamed1, complete sequence	163919-163952	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NZ_CP033379	Escherichia coli strain L73 plasmid pL73-2, complete sequence	44054-44087	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	MG592441	Vibrio phage 1.063.O._10N.261.45.C7, partial genome	122626-122659	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NZ_CP029729	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence	234489-234522	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NZ_CP023479	Klebsiella quasipneumoniae strain KPC142 plasmid pKQPS142a, complete sequence	16973-17006	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NZ_CP034130	Klebsiella quasipneumoniae strain G4584 plasmid pG4584_218.9Kb, complete sequence	46380-46413	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NZ_CP034138	Klebsiella quasipneumoniae subsp. similipneumoniae strain G747 plasmid pG747_218.9Kb, complete sequence	46379-46412	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NZ_CP044968	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence	12688-12721	9	0.735
CP026692_10	10.12\|1927993\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927993-1928026	34	NZ_CP044958	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence	192488-192521	9	0.735
CP026692_10	10.16\|1928277\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1928277-1928310	34	MK250021	Prevotella phage Lak-B2, complete genome	531979-532012	9	0.735
CP026692_10	10.16\|1928277\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1928277-1928310	34	MK250024	Prevotella phage Lak-B5, complete genome	525672-525705	9	0.735
CP026692_10	10.16\|1928277\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1928277-1928310	34	MK250028	Prevotella phage Lak-B9, complete genome	532180-532213	9	0.735
CP026692_10	10.16\|1928277\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1928277-1928310	34	MK250023	Prevotella phage Lak-B4, complete genome	532693-532726	9	0.735
CP026692_10	10.16\|1928277\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1928277-1928310	34	MK250025	Prevotella phage Lak-B6, complete genome	528778-528811	9	0.735
CP026692_10	10.16\|1928277\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1928277-1928310	34	MK250022	Prevotella phage Lak-B3, complete genome	528868-528901	9	0.735
CP026692_10	10.16\|1928277\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1928277-1928310	34	MK250027	Prevotella phage Lak-B8, complete genome	533801-533834	9	0.735
CP026692_10	10.16\|1928277\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1928277-1928310	34	MK250026	Prevotella phage Lak-B7, complete genome	532832-532865	9	0.735
CP026692_10	10.16\|1928277\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1928277-1928310	34	MK250020	Prevotella phage Lak-B1, complete genome	530098-530131	9	0.735
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	NZ_CP053838	Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence	43271-43302	9	0.719
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	NZ_MK715471	Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence	98811-98842	9	0.719
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	MK250029	Prevotella phage Lak-C1, complete genome	381156-381187	9	0.719
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	MN694269	Marine virus AFVG_250M1052, complete genome	38912-38943	9	0.719
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	MK250016	Prevotella phage Lak-A1, complete genome	415929-415960	9	0.719
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_KF831355	Staphylococcus aureus strain A960649 plasmid pBU108a, complete sequence	22060-22090	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NC_013327	Staphylococcus aureus plasmid pWBG749, complete sequence	25058-25088	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_CP042004	Staphylococcus aureus strain B3-14B plasmid pSALNT46, complete sequence	10361-10391	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_CP012594	Staphylococcus aureus strain HOU1444-VR plasmid pVR-MSSA_01, complete sequence	8050-8080	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_KX086582	Staphylococcus aureus strain WBG1024 plasmid pWBG637, complete sequence	26905-26935	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_CP042347	Staphylococcus aureus strain BSN9S plasmid pSaBSN9, complete sequence	18926-18956	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_AP018563	Staphylococcus argenteus strain 58113 plasmid p1, complete sequence	19522-19552	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	CP030569	Staphylococcus aureus strain ER01892.3 plasmid unnamed1, complete sequence	14051-14081	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	CP030458	Staphylococcus aureus strain ER04013.3 plasmid unnamed1, complete sequence	16763-16793	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_AP017923	Staphylococcus aureus strain JP02758 plasmid pJP080, complete sequence	18946-18976	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NC_013325	Staphylococcus aureus plasmid pWBG745, complete sequence	14199-14229	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	CP030696	Staphylococcus aureus strain ER01532.3 plasmid unnamed1, complete sequence	29302-29332	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	CP030710	Staphylococcus aureus strain ER01174.3 plasmid unnamed1, complete sequence	8658-8688	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_CP012757	Staphylococcus aureus subsp. aureus strain JS395 plasmid, complete sequence	38832-38862	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_CP047857	Staphylococcus aureus strain UP_1435 plasmid unnamed1, complete sequence	27993-28023	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_MH587575	Staphylococcus aureus strain WBG4880 plasmid pWBG637, complete sequence	19033-19063	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_MH587574	Staphylococcus aureus strain WBG10514 plasmid pWBG731, complete sequence	18953-18983	9	0.71
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	CP030603	Staphylococcus aureus strain ER00484.3 plasmid unnamed1, complete sequence	35667-35697	9	0.71
CP026692_29	29.4\|6260939\|33\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	6260939-6260971	33	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	511254-511286	9	0.727
CP026692_10	10.4\|1927408\|35\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927408-1927442	35	NC_015057	Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence	296009-296043	10	0.714
CP026692_10	10.16\|1928277\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1928277-1928310	34	CP008939	Candidatus Caedibacter acanthamoebae plasmid Plasmid_00003, complete sequence	1920-1953	10	0.706
CP026692_10	10.16\|1928277\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1928277-1928310	34	NC_020843	Vibrio phage 11895-B1 genomic sequence	52001-52034	10	0.706
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	MK250029	Prevotella phage Lak-C1, complete genome	509627-509658	10	0.688
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	MK250016	Prevotella phage Lak-A1, complete genome	3765-3796	10	0.688
CP026692_15	15.2\|2699080\|32\|CP026692\|CRISPRCasFinder	2699080-2699111	32	MK250019	Prevotella phage Lak-A2, complete genome	463010-463041	10	0.688
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_KX009060	Pseudomonas syringae pv. actinidiae strain RT594 plasmid pUR_RT594, complete sequence	8134-8164	10	0.677
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_KX009063	Pseudomonas syringae pv. actinidiae strain RT811 plasmid pPU_RT811, complete sequence	36054-36084	10	0.677
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_KX009062	Pseudomonas syringae pv. actinidiae strain B4A plasmid pUR_B4A, complete sequence	2462-2492	10	0.677
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_KX009061	Pseudomonas syringae pv. actinidiae strain RT652 plasmid pUR_RT652, complete sequence	14195-14225	10	0.677
CP026692_19	19.2\|3876334\|31\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876334-3876364	31	NZ_CP017011	Pseudomonas syringae pv. actinidiae strain NZ-47 plasmid pPsa22180b, complete sequence	11470-11500	10	0.677
CP026692_19	19.10\|3876905\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	3876905-3876938	34	MN693218	Marine virus AFVG_25M185, complete genome	37035-37068	10	0.706
CP026692_10	10.3\|1927339\|32\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1927339-1927370	32	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	132012-132043	11	0.656
CP026692_10	10.19\|1928492\|34\|CP026692\|PILER-CR,CRISPRCasFinder,CRT	1928492-1928525	34	MN694022	Marine virus AFVG_250M654, complete genome	26187-26220	11	0.676

1. spacer 24.1|4963919|24|CP026692|CRISPRCasFinder matches to NZ_CP047244 (Trichormus variabilis 0441 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.875

gttccccccatgaggaactgccgt	CRISPR spacer
gtttcccccaggaggaactgccga	Protospacer
***.****** ************

2. spacer 24.1|4963919|24|CP026692|CRISPRCasFinder matches to NC_007412 (Trichormus variabilis ATCC 29413 plasmid C, complete sequence) position: , mismatch: 3, identity: 0.875

gttccccccatgaggaactgccgt	CRISPR spacer
gtttcccccaggaggaactgccga	Protospacer
***.****** ************

3. spacer 26.8|5817903|24|CP026692|CRT matches to NC_015314 (Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence) position: , mismatch: 3, identity: 0.875

tgcgcgaagtggtgcgatcgctgt	CRISPR spacer
tacgcgaagcggtgcgatcgctgc	Protospacer
*.*******.*************.

4. spacer 26.8|5817903|24|CP026692|CRT matches to NC_028998 (Phormidium phage MIS-PhV1B, complete genome) position: , mismatch: 3, identity: 0.875

tgcgcgaagtggtgcgatcgctgt	CRISPR spacer
agctcgaagttgtgcgatcgctgt	Protospacer
 ** ****** *************

5. spacer 26.8|5817903|24|CP026692|CRT matches to KF437907 (Phormidium phage MIS-PhV1A, complete genome) position: , mismatch: 3, identity: 0.875

tgcgcgaagtggtgcgatcgctgt	CRISPR spacer
agctcgaagttgtgcgatcgctgt	Protospacer
 ** ****** *************

6. spacer 26.15|5818194|24|CP026692|CRT matches to NC_015314 (Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence) position: , mismatch: 3, identity: 0.875

tgcgcgaagtggtgcgatcgctgt	CRISPR spacer
tacgcgaagcggtgcgatcgctgc	Protospacer
*.*******.*************.

7. spacer 26.15|5818194|24|CP026692|CRT matches to NC_028998 (Phormidium phage MIS-PhV1B, complete genome) position: , mismatch: 3, identity: 0.875

tgcgcgaagtggtgcgatcgctgt	CRISPR spacer
agctcgaagttgtgcgatcgctgt	Protospacer
 ** ****** *************

8. spacer 26.15|5818194|24|CP026692|CRT matches to KF437907 (Phormidium phage MIS-PhV1A, complete genome) position: , mismatch: 3, identity: 0.875

tgcgcgaagtggtgcgatcgctgt	CRISPR spacer
agctcgaagttgtgcgatcgctgt	Protospacer
 ** ****** *************

9. spacer 25.1|5535153|27|CP026692|CRISPRCasFinder matches to NZ_AP017296 (Nostoc sp. NIES-3756 plasmid pNOS3756_1, complete sequence) position: , mismatch: 4, identity: 0.852

caatgc-cattcgcgcagcgtctcgttt	CRISPR spacer
-aaggcgcattcgcgcagcgtctcgtag	Protospacer
 ** ** *******************

10. spacer 25.1|5535153|27|CP026692|CRISPRCasFinder matches to NZ_CP014688 (Acetobacter persici strain TMW2.1084 plasmid pAC1084_1, complete sequence) position: , mismatch: 4, identity: 0.852

caatgccattcgcgcagcgtctcgttt	CRISPR spacer
caatgcaattcgcgcagcgactctatt	Protospacer
****** ************ ***  **

11. spacer 26.8|5817903|24|CP026692|CRT matches to NC_021909 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence) position: , mismatch: 4, identity: 0.833

tgcgcgaagtggtgcgatcgctgt	CRISPR spacer
agcgggaagtggtgcgatcgctcg	Protospacer
 *** *****************

12. spacer 26.15|5818194|24|CP026692|CRT matches to NC_021909 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence) position: , mismatch: 4, identity: 0.833

tgcgcgaagtggtgcgatcgctgt	CRISPR spacer
agcgggaagtggtgcgatcgctcg	Protospacer
 *** *****************

13. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to NC_017804 (Borreliella garinii BgVir plasmid lp54, complete sequence) position: , mismatch: 5, identity: 0.844

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
ataaattgcaaaaaataaaaattatagctaaa	Protospacer
*. *************.*********** * *

14. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NC_015417 (Clostridium botulinum BKT015925 plasmid p1BKT015925, complete sequence) position: , mismatch: 6, identity: 0.806

agcgaatttctgctagttcattatct-taatc	CRISPR spacer
tataaatttctactagttcattatctgtaat-	Protospacer
 ...*******.************** ****

15. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 6, identity: 0.806

agcgaat--ttctgctagttcattatcttaatc	CRISPR spacer
--caaattcttctgcttgttcattatctgaatt	Protospacer
  *.***  ******* *********** ***.

16. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 6, identity: 0.806

agcgaat--ttctgctagttcattatcttaatc	CRISPR spacer
--caaattcttctgcttgttcattatctgaatt	Protospacer
  *.***  ******* *********** ***.

17. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 6, identity: 0.806

agcgaat--ttctgctagttcattatcttaatc	CRISPR spacer
--caaattcttctgcttgttcattatctgaatt	Protospacer
  *.***  ******* *********** ***.

18. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 6, identity: 0.806

agcgaat--ttctgctagttcattatcttaatc	CRISPR spacer
--caaattcttctgcttgttcattatctgaatt	Protospacer
  *.***  ******* *********** ***.

19. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 6, identity: 0.806

agcgaat--ttctgctagttcattatcttaatc	CRISPR spacer
--caaattcttctgcttgttcattatctgaatt	Protospacer
  *.***  ******* *********** ***.

20. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 6, identity: 0.806

agcgaat--ttctgctagttcattatcttaatc	CRISPR spacer
--caaattcttctgcttgttcattatctgaatt	Protospacer
  *.***  ******* *********** ***.

21. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 6, identity: 0.806

agcgaat--ttctgctagttcattatcttaatc	CRISPR spacer
--caaattcttctgcttgttcattatctgaatt	Protospacer
  *.***  ******* *********** ***.

22. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 6, identity: 0.806

agcgaat--ttctgctagttcattatcttaatc	CRISPR spacer
--caaattcttctgcttgttcattatctgaatt	Protospacer
  *.***  ******* *********** ***.

23. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 6, identity: 0.806

agcgaat--ttctgctagttcattatcttaatc	CRISPR spacer
--caaattcttctgcttgttcattatctgaatt	Protospacer
  *.***  ******* *********** ***.

24. spacer 21.1|4243375|28|CP026692|CRISPRCasFinder matches to NZ_AP022558 (Geobacillus subterraneus strain E55-1 plasmid pGspE55-1, complete sequence) position: , mismatch: 6, identity: 0.786

caaccaggatcaaacccttgccagcttg	CRISPR spacer
caacaaggttcaaacccttgccatccga	Protospacer
**** *** ************** *. .

25. spacer 25.1|5535153|27|CP026692|CRISPRCasFinder matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 6, identity: 0.778

caatgccattcgcgcagcgtctcgttt	CRISPR spacer
atctgccattcggacagcgtctcgttc	Protospacer
   ********* .************.

26. spacer 25.1|5535153|27|CP026692|CRISPRCasFinder matches to NZ_CP050441 (Tolypothrix sp. PCC 7910 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

caatgccattcgcgcagcgtctcgttt	CRISPR spacer
cgatgccattcgcggagcgtctccaag	Protospacer
*.************ ********

27. spacer 25.1|5535153|27|CP026692|CRISPRCasFinder matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 6, identity: 0.778

caatgccattcgcgcagcgtctcgttt	CRISPR spacer
cgcacccattcgcgcagcgtctcgatc	Protospacer
*.   ******************* *.

28. spacer 25.1|5535153|27|CP026692|CRISPRCasFinder matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 6, identity: 0.778

caatgccattcgcgcagcgtctcgttt	CRISPR spacer
cgcacccattcgcgcagcgtctcgatc	Protospacer
*.   ******************* *.

29. spacer 25.1|5535153|27|CP026692|CRISPRCasFinder matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 6, identity: 0.778

caatgccattcgcgcagcgtctcgttt	CRISPR spacer
cgcacccattcgcgcagcgtctcgatc	Protospacer
*.   ******************* *.

30. spacer 25.1|5535153|27|CP026692|CRISPRCasFinder matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 6, identity: 0.778

caatgccattcgcgcagcgtctcgttt	CRISPR spacer
cgcacccattcgcgcagcgtctcgatc	Protospacer
*.   ******************* *.

31. spacer 25.1|5535153|27|CP026692|CRISPRCasFinder matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 6, identity: 0.778

caatgccattcgcgcagcgtctcgttt	CRISPR spacer
cgcacccattcgcgcagcgtctcgatc	Protospacer
*.   ******************* *.

32. spacer 25.1|5535153|27|CP026692|CRISPRCasFinder matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 6, identity: 0.778

caatgccattcgcgcagcgtctcgttt	CRISPR spacer
cgcacccattcgcgcagcgtctcgatc	Protospacer
*.   ******************* *.

33. spacer 25.1|5535153|27|CP026692|CRISPRCasFinder matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 6, identity: 0.778

caatgccattcgcgcagcgtctcgttt	CRISPR spacer
cgcacccattcgcgcagcgtctcgatc	Protospacer
*.   ******************* *.

34. spacer 10.16|1928277|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MN694456 (Marine virus AFVG_250M1118, complete genome) position: , mismatch: 7, identity: 0.794

ggtaac--aagtttattaaaggtataatttttctaa	CRISPR spacer
--caacctaagtttattaaagatatattttttccta	Protospacer
  .***  *************.**** ******. *

35. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to MK448664 (Streptococcus satellite phage Javan99, complete genome) position: , mismatch: 7, identity: 0.781

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
atagatggcaaaaaatgaaaatgatagcctta	Protospacer
*. .** *************** *****  **

36. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to NZ_CP011027 (Pseudoalteromonas arctica A 37-1-2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
atcaattgctaaaaaagaaaattatgtctaca	Protospacer
*.******* ***** *********. * *.*

37. spacer 25.1|5535153|27|CP026692|CRISPRCasFinder matches to NC_003240 (Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120beta, complete sequence) position: , mismatch: 7, identity: 0.741

caatgccattcgcgcagcgtctcgttt	CRISPR spacer
gcccgccgttcgcgcagcgtctcgtag	Protospacer
   .***.*****************

38. spacer 5.1|971145|34|CP026692|CRISPRCasFinder,CRT matches to AP022644 (Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence) position: , mismatch: 8, identity: 0.765

cagactggt---aacaagtctgaagagttaattaaaa	CRISPR spacer
---acttatcaagacaagtctgtagagttaactaaaa	Protospacer
   *** .*   .********* ********.*****

39. spacer 5.1|971145|34|CP026692|CRISPRCasFinder,CRT matches to NZ_CP018741 (Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence) position: , mismatch: 8, identity: 0.765

cagactggt---aacaagtctgaagagttaattaaaa	CRISPR spacer
---acttatcaagacaagtctgtagagttaactaaaa	Protospacer
   *** .*   .********* ********.*****

40. spacer 5.1|971145|34|CP026692|CRISPRCasFinder,CRT matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

cagactggt---aacaagtctgaagagttaattaaaa	CRISPR spacer
---acttatcaagacaagtctgtagagttaactaaaa	Protospacer
   *** .*   .********* ********.*****

41. spacer 5.1|971145|34|CP026692|CRISPRCasFinder,CRT matches to NZ_CP016590 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence) position: , mismatch: 8, identity: 0.765

cagactggt---aacaagtctgaagagttaattaaaa	CRISPR spacer
---acttatcaagacaagtctgtagagttaactaaaa	Protospacer
   *** .*   .********* ********.*****

42. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NC_007581 (Clostridium phage c-st, complete genome) position: , mismatch: 8, identity: 0.765

ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
atgtatatatggatttatattttgataaaaatta	Protospacer
 * ***..  *** *********** ********

43. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to AP008983 (Clostridium phage c-st genomic DNA, complete genome) position: , mismatch: 8, identity: 0.765

ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
atgtatatatggatttatattttgataaaaatta	Protospacer
 * ***..  *** *********** ********

44. spacer 13.24|2392769|33|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NC_022536 (Rhizobium sp. IRBG74 plasmid IRBL74_p, complete sequence) position: , mismatch: 8, identity: 0.758

agcttttgacgctgccaccgaaaatcctgcctt	CRISPR spacer
cgaaatcaacgccgccaccgaaaatcttgcctt	Protospacer
 *   *..****.*************.******

45. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to NZ_CP013204 (Paenibacillus sp. IHB B 3084 plasmid pHD01, complete sequence) position: , mismatch: 8, identity: 0.75

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
aacaactgcaaaaaatgaaaagtataatatca	Protospacer
* ***.*************** ****... .*

46. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to NZ_CP042244 (Crassaminicella sp. SY095 plasmid pCT01, complete sequence) position: , mismatch: 8, identity: 0.75

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
tttagttgcaaaaaataaaaataatagcatta	Protospacer
 ..*.***********.***** *****. **

47. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to KJ019089 (Synechococcus phage ACG-2014j isolate Syn7803US23, complete genome) position: , mismatch: 8, identity: 0.75

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
aaaaattgccaaaattgaaaattatatcactg	Protospacer
*  ****** **** *********** *. *.

48. spacer 3.18|893500|36|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007647 (Lactobacillus salivarius strain JCM1046 plasmid pMP1046A, complete sequence) position: , mismatch: 9, identity: 0.75

aatttctaataattaagtgaattttaacttattaaa	CRISPR spacer
ctcatctaataattgattgaattttaacttatcagt	Protospacer
  . **********.* ***************.*.

49. spacer 3.18|893500|36|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

aatttctaataattaagtgaattttaacttattaaa	CRISPR spacer
ctcatctaataattgattgaattttaacttatcagt	Protospacer
  . **********.* ***************.*.

50. spacer 3.18|893500|36|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 9, identity: 0.75

aatttctaataattaagtgaattttaacttattaaa	CRISPR spacer
ctcatctaataattgattgaattttaacttatcagt	Protospacer
  . **********.* ***************.*.

51. spacer 3.18|893500|36|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT604075 (Lactobacillus salivarius isolate LPM01 plasmid II) position: , mismatch: 9, identity: 0.75

aatttctaataattaagtgaattttaacttattaaa	CRISPR spacer
ctcatctaataattgattgaattttaacttatcagt	Protospacer
  . **********.* ***************.*.

52. spacer 5.1|971145|34|CP026692|CRISPRCasFinder,CRT matches to NC_010933 (Bacillus cereus strain G9241 plasmid pBC210, complete sequence) position: , mismatch: 9, identity: 0.735

cagactggtaacaagtctgaagagttaattaaaa	CRISPR spacer
tctattcataacaagtctgaggatttaattaata	Protospacer
.  *.* .************.** ******** *

53. spacer 5.1|971145|34|CP026692|CRISPRCasFinder,CRT matches to NZ_CP009591 (Bacillus cereus G9241 plasmid pBC210, complete sequence) position: , mismatch: 9, identity: 0.735

cagactggtaacaagtctgaagagttaattaaaa	CRISPR spacer
tctattcataacaagtctgaggatttaattaata	Protospacer
.  *.* .************.** ******** *

54. spacer 5.1|971145|34|CP026692|CRISPRCasFinder,CRT matches to NZ_CP009940 (Bacillus cereus strain 03BB87 plasmid pBCX01, complete sequence) position: , mismatch: 9, identity: 0.735

cagactggtaacaagtctgaagagttaattaaaa	CRISPR spacer
tctattcataacaagtctgaggatttaattaata	Protospacer
.  *.* .************.** ******** *

55. spacer 8.2|1722776|30|CP026692|CRT matches to KJ621082 (Dinoroseobacter phage DFL12phi1, complete genome) position: , mismatch: 9, identity: 0.7

tggtgtagccatcggtgtagacattggtgt	CRISPR spacer
catcatagccatcggtgtagaccttgagtt	Protospacer
.. ..***************** ***.  *

56. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

57. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

58. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

59. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026186 (Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-3967, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

60. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028549 (Klebsiella variicola strain WCHKP19 plasmid p1_020019, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

61. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NC_011282 (Klebsiella variicola strain 342 plasmid pKP187, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

62. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024507 (Klebsiella pneumoniae strain KSB2_1B plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

63. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033379 (Escherichia coli strain L73 plasmid pL73-2, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

64. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MG592441 (Vibrio phage 1.063.O._10N.261.45.C7, partial genome) position: , mismatch: 9, identity: 0.735

ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
tatttaaaggggagttatattatgagaaaaatta	Protospacer
* **  .  .***.******* ************

65. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

66. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023479 (Klebsiella quasipneumoniae strain KPC142 plasmid pKQPS142a, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

67. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034130 (Klebsiella quasipneumoniae strain G4584 plasmid pG4584_218.9Kb, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

68. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034138 (Klebsiella quasipneumoniae subsp. similipneumoniae strain G747 plasmid pG747_218.9Kb, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

69. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

70. spacer 10.12|1927993|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 9, identity: 0.735

----ttttatgctaggaattatattttgagaaaaatta	CRISPR spacer
gaagtat----ctatgaattagattttgagaaaaaaga	Protospacer
    * *    *** ****** *************  *

71. spacer 10.16|1928277|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 9, identity: 0.735

ggtaacaagtttattaaaggtataatttttctaa	CRISPR spacer
tgtgctcactttattaaaaatataatttttctat	Protospacer
 **. . * *********..*************

72. spacer 10.16|1928277|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 9, identity: 0.735

ggtaacaagtttattaaaggtataatttttctaa	CRISPR spacer
tgtgctcactttattaaaaatataatttttctat	Protospacer
 **. . * *********..*************

73. spacer 10.16|1928277|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 9, identity: 0.735

ggtaacaagtttattaaaggtataatttttctaa	CRISPR spacer
tgtgctcactttattaaaaatataatttttctat	Protospacer
 **. . * *********..*************

74. spacer 10.16|1928277|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 9, identity: 0.735

ggtaacaagtttattaaaggtataatttttctaa	CRISPR spacer
tgtgctcactttattaaaaatataatttttctat	Protospacer
 **. . * *********..*************

75. spacer 10.16|1928277|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 9, identity: 0.735

ggtaacaagtttattaaaggtataatttttctaa	CRISPR spacer
tgtgctcactttattaaaaatataatttttctat	Protospacer
 **. . * *********..*************

76. spacer 10.16|1928277|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 9, identity: 0.735

ggtaacaagtttattaaaggtataatttttctaa	CRISPR spacer
tgtgctcactttattaaaaatataatttttctat	Protospacer
 **. . * *********..*************

77. spacer 10.16|1928277|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 9, identity: 0.735

ggtaacaagtttattaaaggtataatttttctaa	CRISPR spacer
tgtgctcactttattaaaaatataatttttctat	Protospacer
 **. . * *********..*************

78. spacer 10.16|1928277|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 9, identity: 0.735

ggtaacaagtttattaaaggtataatttttctaa	CRISPR spacer
tgtgctcactttattaaaaatataatttttctat	Protospacer
 **. . * *********..*************

79. spacer 10.16|1928277|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 9, identity: 0.735

ggtaacaagtttattaaaggtataatttttctaa	CRISPR spacer
tgtgctcactttattaaaaatataatttttctat	Protospacer
 **. . * *********..*************

80. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to NZ_CP053838 (Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence) position: , mismatch: 9, identity: 0.719

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
tgcaattgtaaaaaatgaaaatgatgaagagt	Protospacer
  ******.************* **.. **

81. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 9, identity: 0.719

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
tgcaattgtaaaaaatgaaaatgatgaagagt	Protospacer
  ******.************* **.. **

82. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 9, identity: 0.719

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
ggaaattgcaagaaatgacaattataaactta	Protospacer
.  ********.****** *******.   **

83. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to MN694269 (Marine virus AFVG_250M1052, complete genome) position: , mismatch: 9, identity: 0.719

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
aacaattgcaagaaatgaaaactatccccggc	Protospacer
* *********.*********.***  * .

84. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 9, identity: 0.719

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
ggaaattgcaagaaatgacaattataaactta	Protospacer
.  ********.****** *******.   **

85. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KF831355 (Staphylococcus aureus strain A960649 plasmid pBU108a, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

86. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NC_013327 (Staphylococcus aureus plasmid pWBG749, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

87. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042004 (Staphylococcus aureus strain B3-14B plasmid pSALNT46, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

88. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012594 (Staphylococcus aureus strain HOU1444-VR plasmid pVR-MSSA_01, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

89. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX086582 (Staphylococcus aureus strain WBG1024 plasmid pWBG637, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

90. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042347 (Staphylococcus aureus strain BSN9S plasmid pSaBSN9, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

91. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018563 (Staphylococcus argenteus strain 58113 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

92. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to CP030569 (Staphylococcus aureus strain ER01892.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

93. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to CP030458 (Staphylococcus aureus strain ER04013.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

94. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017923 (Staphylococcus aureus strain JP02758 plasmid pJP080, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

95. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NC_013325 (Staphylococcus aureus plasmid pWBG745, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

96. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to CP030696 (Staphylococcus aureus strain ER01532.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

97. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to CP030710 (Staphylococcus aureus strain ER01174.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

98. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012757 (Staphylococcus aureus subsp. aureus strain JS395 plasmid, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

99. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047857 (Staphylococcus aureus strain UP_1435 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

100. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH587575 (Staphylococcus aureus strain WBG4880 plasmid pWBG637, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

101. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH587574 (Staphylococcus aureus strain WBG10514 plasmid pWBG731, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

102. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to CP030603 (Staphylococcus aureus strain ER00484.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
ttgtgttttctgcttgttcattatctttatt	Protospacer
    . ******** ************ **.

103. spacer 29.4|6260939|33|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 9, identity: 0.727

cgctcaaatctcgtaggggatgagcggctattg	CRISPR spacer
ctcgtccgtctcgtaggggatcagcggctcttc	Protospacer
* * .  .************* ******* **

104. spacer 10.4|1927408|35|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NC_015057 (Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence) position: , mismatch: 10, identity: 0.714

tggaagcttgggtttggtggaagcagggggcaaag	CRISPR spacer
tttgggcttgggtttggtgggagccgggggtggcg	Protospacer
*  ..***************.*** *****... *

105. spacer 10.16|1928277|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to CP008939 (Candidatus Caedibacter acanthamoebae plasmid Plasmid_00003, complete sequence) position: , mismatch: 10, identity: 0.706

ggtaacaagtttattaaaggtataatttttctaa	CRISPR spacer
ttttttagttttattaaaggtaaaagttttctat	Protospacer
  *  .*. ************* ** *******

106. spacer 10.16|1928277|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NC_020843 (Vibrio phage 11895-B1 genomic sequence) position: , mismatch: 10, identity: 0.706

ggtaacaagtttattaaaggtataatttttctaa	CRISPR spacer
ggtaagaagtttattaaaggtttagatgggagga	Protospacer
***** *************** **. *     .*

107. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 10, identity: 0.688

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
ttaaattgcaaaaaattaatattatatgtttt	Protospacer
 . ************* ** ******    *

108. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 10, identity: 0.688

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
ttaaattgcaaaaaattaatattatatgtttt	Protospacer
 . ************* ** ******    *

109. spacer 15.2|2699080|32|CP026692|CRISPRCasFinder matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 10, identity: 0.688

accaattgcaaaaaatgaaaattatagcgata	CRISPR spacer
ttaaattgcaaaaaattaatattatatgtttt	Protospacer
 . ************* ** ******    *

110. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX009060 (Pseudomonas syringae pv. actinidiae strain RT594 plasmid pUR_RT594, complete sequence) position: , mismatch: 10, identity: 0.677

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
cacgcatttctgcaagttcattatccctcga	Protospacer
 .** ******** ***********..

111. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX009063 (Pseudomonas syringae pv. actinidiae strain RT811 plasmid pPU_RT811, complete sequence) position: , mismatch: 10, identity: 0.677

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
cacgcatttctgcaagttcattatccctcga	Protospacer
 .** ******** ***********..

112. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX009062 (Pseudomonas syringae pv. actinidiae strain B4A plasmid pUR_B4A, complete sequence) position: , mismatch: 10, identity: 0.677

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
cacgcatttctgcaagttcattatccctcga	Protospacer
 .** ******** ***********..

113. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX009061 (Pseudomonas syringae pv. actinidiae strain RT652 plasmid pUR_RT652, complete sequence) position: , mismatch: 10, identity: 0.677

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
cacgcatttctgcaagttcattatccctcga	Protospacer
 .** ******** ***********..

114. spacer 19.2|3876334|31|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017011 (Pseudomonas syringae pv. actinidiae strain NZ-47 plasmid pPsa22180b, complete sequence) position: , mismatch: 10, identity: 0.677

agcgaatttctgctagttcattatcttaatc	CRISPR spacer
cacgcatttctgcaagttcattatccctcga	Protospacer
 .** ******** ***********..

115. spacer 19.10|3876905|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MN693218 (Marine virus AFVG_25M185, complete genome) position: , mismatch: 10, identity: 0.706

gccaataaagatgttttttataaaggtgttgatt	CRISPR spacer
atgggtaaagatttttttgataaaggtgtgtttt	Protospacer
.. ..******* ***** **********   **

116. spacer 10.3|1927339|32|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 11, identity: 0.656

ggtgaattagaattgcgccttcggatttttaa	CRISPR spacer
agtgaatgagaatggcgccttcggcgccggcg	Protospacer
.****** ***** **********  ..   .

117. spacer 10.19|1928492|34|CP026692|PILER-CR,CRISPRCasFinder,CRT matches to MN694022 (Marine virus AFVG_250M654, complete genome) position: , mismatch: 11, identity: 0.676

aggatctacatcctcagcaatcttgttttctaat	CRISPR spacer
gcctcgtgcatctgcagcaatcttgttttctagg	Protospacer
.   . *.****. ******************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2847802 : 2905934

Mycobacterium_phage(16.67%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVH71103.1\|2847802_2849023_+\|transposase	transposase	NA	NA	NA	NA
AVH71104.1\|2851805_2852045_+	hypothetical protein	NA	NA	NA	NA
AVH71105.1\|2852041_2852500_+	HNH endonuclease	A0A0A7RXZ9	Mycobacterium_phage	2.2e-05	41.0
AVH71106.1\|2852971_2854192_-\|transposase	transposase	NA	NA	NA	NA
AVH71107.1\|2854472_2854853_+	hypothetical protein	NA	NA	NA	NA
AVH71108.1\|2855009_2855969_-	hypothetical protein	NA	NA	NA	NA
AVH71109.1\|2857632_2858598_-	chromosome/plasmid partitioning protein ParB	S5VTK0	Leptospira_phage	2.4e-09	27.9
AVH71110.1\|2858600_2859368_-	chromosome/plasmid partitioning protein ParA	A0A240F4U1	Ochrobactrum_phage	6.6e-18	26.9
AVH71111.1\|2859954_2860335_-	hypothetical protein	NA	NA	NA	NA
AVH71112.1\|2860615_2861836_+\|transposase	transposase	NA	NA	NA	NA
AVH71113.1\|2862208_2862592_-	hypothetical protein	NA	NA	NA	NA
AVH71114.1\|2862581_2862872_-	hypothetical protein	NA	NA	NA	NA
AVH71115.1\|2863120_2864356_-	abortive phage infection protein AIPR	NA	NA	NA	NA
AVH71116.1\|2867419_2868403_-	Integrase/site-specific recombinase XerD	A0A1P8DJ76	Virus_Rctr85	3.2e-49	41.8
AVH71117.1\|2870723_2872358_-	filamentous hemagglutinin family outer membrane protein	NA	NA	NA	NA
AVH71118.1\|2872581_2873361_+	methyltransferase	NA	NA	NA	NA
AVH71119.1\|2874654_2876414_-\|transposase	MULE transposase	NA	NA	NA	NA
AVH71120.1\|2876518_2877016_-	3-demethylubiquinone-9 3-methyltransferase	NA	NA	NA	NA
AVH71121.1\|2877051_2877411_-	YCII-related protein	NA	NA	NA	NA
AVH71122.1\|2879040_2879376_-	hypothetical protein	NA	NA	NA	NA
AVH71123.1\|2879498_2880302_-	hypothetical protein	NA	NA	NA	NA
AVH71124.1\|2880264_2881620_-	replicative DNA helicase DnaB	A0A2H4PAV8	Aphanizomenon_phage	1.0e-90	43.0
AVH71125.1\|2881616_2882510_-	HTH domain-containing protein	NA	NA	NA	NA
AVH71126.1\|2882793_2883162_+	hypothetical protein	NA	NA	NA	NA
AVH71127.1\|2883525_2883984_-	hypothetical protein	NA	NA	NA	NA
AVH71128.1\|2883976_2884762_-	cobyrinic acid ac-diamide synthase	NA	NA	NA	NA
AVH71129.1\|2885326_2886289_+	hypothetical protein	NA	NA	NA	NA
AVH71130.1\|2886291_2886582_+	hypothetical protein	NA	NA	NA	NA
AVH71131.1\|2889284_2889467_-	hypothetical protein	NA	NA	NA	NA
AVH71132.1\|2889604_2889904_-	hypothetical protein	NA	NA	NA	NA
AVH71133.1\|2890148_2890418_-	hypothetical protein	NA	NA	NA	NA
AVH71134.1\|2890542_2890821_-	CRISPR-associated protein Cas2	NA	NA	NA	NA
AVH71135.1\|2890823_2891867_-	CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
AVH71136.1\|2892952_2894959_-	CRISPR-associated RNA-directed DNA polymerase/endonuclease Cas1	NA	NA	NA	NA
AVH71137.1\|2895188_2895947_+	protein of unknown function DUF4384	NA	NA	NA	NA
AVH71138.1\|2897834_2898950_+\|transposase	transposase	NA	NA	NA	NA
AVH71139.1\|2899124_2899805_-	hypothetical protein	NA	NA	NA	NA
AVH71140.1\|2899807_2900275_-	hypothetical protein	NA	NA	NA	NA
AVH71141.1\|2900278_2901313_-	Integrase/site-specific recombinase XerD	A0A1B1P7C7	Bacillus_phage	1.1e-12	30.8
AVH71142.1\|2901299_2901635_-	XisI protein	NA	NA	NA	NA
AVH71143.1\|2901622_2902039_-	XisH protein	NA	NA	NA	NA
AVH71144.1\|2902927_2903221_-	hypothetical protein	NA	NA	NA	NA
AVH71145.1\|2904818_2905934_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

3396991 : 3468051

Bacillus_phage(28.57%)

plate,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVH71503.1\|3396991_3399445_-\|protease	ATP-dependent Clp protease ATP-binding protein	K4FB40	Cronobacter_phage	1.3e-128	40.5
AVH71504.1\|3399754_3400051_+	protein of unknown function DUF3288	NA	NA	NA	NA
AVH71505.1\|3400511_3401474_+	hypothetical protein	NA	NA	NA	NA
AVH71506.1\|3401638_3403153_-	mammalian cell entry protein-related protein	NA	NA	NA	NA
AVH71507.1\|3403248_3404031_-	organic solvent resistance ABC transporter ATP-binding protein Ttg2A	G3M9Y6	Bacillus_virus	7.9e-19	30.3
AVH71508.1\|3404703_3405741_+	threonine aldolase	NA	NA	NA	NA
AVH71509.1\|3406453_3408676_+	AAA ATPase	NA	NA	NA	NA
AVH71510.1\|3409109_3409823_-	hypothetical protein	NA	NA	NA	NA
AVH71511.1\|3409865_3411356_-	high-affinity nickel-transporter	NA	NA	NA	NA
AVH71512.1\|3411510_3412881_-	TPR repeat-containing protein	NA	NA	NA	NA
AVH71513.1\|3412886_3414161_-	protein of unknown function DUF4331	NA	NA	NA	NA
AVH71514.1\|3414680_3415097_-	nuclease	NA	NA	NA	NA
AVH71515.1\|3415350_3416619_-	histidine kinase	W8CYF6	Bacillus_phage	2.2e-10	25.3
AVH71516.1\|3417194_3419666_+	single-stranded-DNA exonuclease RecJ	A7KV88	Bacillus_phage	2.8e-41	24.8
AVH71517.1\|3419821_3421168_-	FAD-dependent pyridine nucleotide-disulfide oxidoreductase	NA	NA	NA	NA
AVH71518.1\|3421520_3422432_-	LysR family transcriptional regulator	NA	NA	NA	NA
AVH71519.1\|3422705_3423194_+	SnoaL-like domain protein	NA	NA	NA	NA
AVH71520.1\|3423435_3424035_+	NADP oxidoreductase	NA	NA	NA	NA
AVH71521.1\|3424097_3424724_+	NADP oxidoreductase	NA	NA	NA	NA
AVH71522.1\|3425046_3425514_+	hypothetical protein	NA	NA	NA	NA
AVH71523.1\|3425887_3426676_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AVH71524.1\|3426695_3427517_-	nitroreductase	NA	NA	NA	NA
AVH71525.1\|3427625_3428750_-	aliphatic sulfonates ABC transporter substrate-binding protein	NA	NA	NA	NA
AVH71526.1\|3428902_3429664_-	class II aldolase/adducin family protein	NA	NA	NA	NA
AVH71527.1\|3429647_3430322_-	cysteine dioxygenase type I	NA	NA	NA	NA
AVH71528.1\|3431375_3431717_+	hypothetical protein	NA	NA	NA	NA
AVH71529.1\|3431946_3432225_-	prevent-host-death protein	NA	NA	NA	NA
AVH71530.1\|3433266_3434592_+	protein of unknown function DUF21	NA	NA	NA	NA
AVH71531.1\|3435373_3436450_+	metal transporter	NA	NA	NA	NA
AVH71532.1\|3438160_3439252_+	hypothetical protein	NA	NA	NA	NA
AVH71533.1\|3439401_3439602_+	hypothetical protein	NA	NA	NA	NA
AVH71534.1\|3439603_3440311_+\|tail	phage tail protein	NA	NA	NA	NA
AVH71535.1\|3440485_3440905_+	hypothetical protein	NA	NA	NA	NA
AVH71536.1\|3440938_3441487_+	hypothetical protein	NA	NA	NA	NA
AVH71537.1\|3441599_3443660_+	Rhs element Vgr protein	NA	NA	NA	NA
AVH71538.1\|3443896_3445096_-	hypothetical protein	NA	NA	NA	NA
AVH71539.1\|3445365_3446493_-\|tail	phage tail protein	NA	NA	NA	NA
AVH71540.1\|3446496_3448707_-\|plate	baseplate J family protein	A0A1J0GW37	Streptomyces_phage	2.9e-10	25.2
AVH71541.1\|3448709_3449123_-\|plate	phage baseplate assembly protein W	M4SKQ1	Cyanophage	1.9e-08	33.0
AVH71542.1\|3451431_3451980_-	FHA domain-containing protein	NA	NA	NA	NA
AVH71543.1\|3451994_3454127_-	serine/threonine protein kinase	NA	NA	NA	NA
AVH71544.1\|3454173_3454863_-	LuxR family two component transcriptional regulator	NA	NA	NA	NA
AVH71545.1\|3454856_3456041_-	histidine kinase	NA	NA	NA	NA
AVH71546.1\|3457779_3459987_+	WD40 repeat-containing protein	NA	NA	NA	NA
AVH71547.1\|3460016_3461828_+	surface antigen (D15)	NA	NA	NA	NA
AVH71548.1\|3462226_3464527_+	hypothetical protein	NA	NA	NA	NA
AVH71549.1\|3465441_3466287_+	protein of unknown function DUF4255	NA	NA	NA	NA
AVH71550.1\|3466332_3468051_+\|tail	phage tail sheath protein FI	A0A1J0GW47	Streptomyces_phage	3.2e-36	34.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP026692

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection