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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP018884 Klebsiella pneumoniae subsp. pneumoniae strain BR7 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 2 0
CP018883 Klebsiella pneumoniae subsp. pneumoniae strain BR7 chromosome, complete genome 1 crisprs DEDDh,RT,DinG,cas3,csa3,WYL 0 0 11 0

Results visualization

1. CP018884
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 14105 : 39229 34 Escherichia_phage(38.46%) transposase,protease NA
DBSCAN-SWA_2 51158 : 103914 52 Escherichia_phage(25.0%) integrase,transposase attL 57812:57829|attR 93431:93448
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP018883
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP018883_1 3030652-3030746 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 296470 : 303375 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_2 328957 : 369395 35 Enterobacteria_phage(26.67%) transposase NA
DBSCAN-SWA_3 1251124 : 1257553 6 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_4 1482313 : 1524055 63 Klebsiella_phage(35.42%) head,terminase,protease,tail,lysis,integrase attL 1515168:1515182|attR 1521177:1521191
DBSCAN-SWA_5 1556988 : 1621716 78 Klebsiella_phage(22.41%) terminase,tail,transposase,integrase,holin attL 1556770:1556785|attR 1619022:1619037
DBSCAN-SWA_6 2002605 : 2095556 100 Salmonella_phage(57.63%) head,plate,tRNA,protease,portal,tail,capsid,integrase attL 2058131:2058149|attR 2095631:2095649
DBSCAN-SWA_7 2767355 : 2779009 15 Enterobacteria_phage(70.0%) integrase attL 2767207:2767220|attR 2771420:2771433
DBSCAN-SWA_8 3246173 : 3253855 10 Enterobacteria_phage(85.71%) transposase NA
DBSCAN-SWA_9 3446345 : 3451432 8 Escherichia_phage(33.33%) transposase NA
DBSCAN-SWA_10 4312599 : 4345857 36 uncultured_Caudovirales_phage(75.0%) head,capsid,terminase,tRNA,portal,tail,integrase attL 4330207:4330224|attR 4346202:4346219
DBSCAN-SWA_11 5103245 : 5149479 61 Salmonella_phage(83.72%) head,plate,tRNA,portal,coat,tail,capsid,integrase attL 5101539:5101585|attR 5138105:5138151
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage