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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP026378 Pantoea calida strain DSM 22759 chromosome, complete genome 3 crisprs DEDDh,cas3,DinG,RT,csa3 0 5 5 0

Results visualization

1. CP026378
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP026378_2 963137-963294 Orphan I-F
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP026378_3 1071994-1072202 Orphan I-F
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP026378_4 2702830-2702918 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP026378_2 2.1|963175|22|CP026378|PILER-CR 963175-963196 22 NZ_CP044405 Escherichia coli strain NMBU-W10C18 plasmid pNMBU-W10C18_03, complete sequence 7724-7745 2 0.909
CP026378_2 2.1|963175|22|CP026378|PILER-CR 963175-963196 22 NZ_CP026728 Escherichia coli strain 266917_2 plasmid p266917_2_05, complete sequence 22132-22153 2 0.909
CP026378_2 2.1|963175|22|CP026378|PILER-CR 963175-963196 22 NZ_CP024054 Escherichia coli strain SMN197SH3 plasmid pO177B3, complete sequence 33108-33129 2 0.909
CP026378_2 2.1|963175|22|CP026378|PILER-CR 963175-963196 22 NZ_CP024616 Escherichia coli strain SMN152SH1 plasmid pO177B1, complete sequence 1899-1920 2 0.909
CP026378_2 2.1|963175|22|CP026378|PILER-CR 963175-963196 22 NZ_LT985239 Escherichia coli strain 692 genome assembly, plasmid: RCS29_pII 3966-3987 2 0.909
CP026378_2 2.1|963175|22|CP026378|PILER-CR 963175-963196 22 NZ_LR025104 Escherichia coli isolate EC-1639 plasmid 5, complete sequence 19726-19747 2 0.909
CP026378_2 2.1|963175|22|CP026378|PILER-CR 963175-963196 22 NZ_CP023675 Escherichia coli strain SMN013SH2 plasmid pO177B2, complete sequence 37562-37583 2 0.909
CP026378_2 2.1|963175|22|CP026378|PILER-CR 963175-963196 22 NZ_CP027592 Escherichia coli strain 2014C-3011 plasmid unnamed3 13223-13244 2 0.909
CP026378_2 2.1|963175|22|CP026378|PILER-CR 963175-963196 22 NZ_CP047611 Escherichia coli strain NMBU_ W06E18 plasmid pNMBU_W06E18_Str1_2, complete sequence 32827-32848 2 0.909
CP026378_2 2.1|963175|22|CP026378|PILER-CR 963175-963196 22 NZ_CP010194 Escherichia coli strain M8 plasmid C, complete genome 24792-24813 2 0.909
CP026378_2 2.1|963175|22|CP026378|PILER-CR 963175-963196 22 MN319465 Klebsiella pneumoniae strain LDL3-2 plasmid pHNLDL3-2, complete sequence 44206-44227 2 0.909
CP026378_2 2.1|963175|22|CP026378|PILER-CR 963175-963196 22 NZ_CP023980 Klebsiella variicola strain X39 plasmid pX39-3, complete sequence 44374-44395 2 0.909
CP026378_2 2.1|963175|22|CP026378|PILER-CR 963175-963196 22 NZ_MK079571 Klebsiella pneumoniae strain 6BF16CTX plasmid pHNBF16, complete sequence 45104-45125 2 0.909
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 MN319465 Klebsiella pneumoniae strain LDL3-2 plasmid pHNLDL3-2, complete sequence 44206-44237 2 0.938
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP023980 Klebsiella variicola strain X39 plasmid pX39-3, complete sequence 44374-44405 2 0.938
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_MK079571 Klebsiella pneumoniae strain 6BF16CTX plasmid pHNBF16, complete sequence 45104-45135 2 0.938
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP045764 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid p2CFSAN000318, complete sequence 33814-33845 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_KT754165 Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence 17010-17041 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP044405 Escherichia coli strain NMBU-W10C18 plasmid pNMBU-W10C18_03, complete sequence 7724-7755 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP026728 Escherichia coli strain 266917_2 plasmid p266917_2_05, complete sequence 22132-22163 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP035754 Escherichia coli E110019 plasmid pE110019_33, complete sequence 18993-19024 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP034939 Pectobacterium odoriferum strain JK2.1 plasmid p.Jk2_1, complete sequence 12727-12758 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP024054 Escherichia coli strain SMN197SH3 plasmid pO177B3, complete sequence 33098-33129 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP024616 Escherichia coli strain SMN152SH1 plasmid pO177B1, complete sequence 1899-1930 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NC_013718 Citrobacter rodentium ICC168 plasmid pCROD2, complete sequence 11100-11131 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP019016 Escherichia coli strain Ecol_244 plasmid pEC244_4, complete sequence 11049-11080 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_LT985239 Escherichia coli strain 692 genome assembly, plasmid: RCS29_pII 3956-3987 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_LT985318 Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_p 4428-4459 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_LR025104 Escherichia coli isolate EC-1639 plasmid 5, complete sequence 19726-19757 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP023675 Escherichia coli strain SMN013SH2 plasmid pO177B2, complete sequence 37562-37593 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP027592 Escherichia coli strain 2014C-3011 plasmid unnamed3 13213-13244 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NC_021841 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid pSEEH1578_02, complete sequence 16907-16938 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP047611 Escherichia coli strain NMBU_ W06E18 plasmid pNMBU_W06E18_Str1_2, complete sequence 32827-32858 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP010194 Escherichia coli strain M8 plasmid C, complete genome 24782-24813 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP029976 Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C, complete sequence 4413-4444 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 CP052800 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-2, complete sequence 11403-11434 3 0.906
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NC_011752 Escherichia coli 55989 plasmid 55989p, complete sequence 1619-1650 5 0.844
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 CP042952 Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence 18039-18070 5 0.844
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 CP051693 Escherichia coli strain SCU-318 plasmid pSCU-318-1, complete sequence 59451-59482 5 0.844
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NC_019000 Escherichia coli plasmid pHUSEC41-2, complete sequence 1619-1650 5 0.844
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP009053 Escherichia coli NCCP15648 plasmid p15648-3, complete sequence 1619-1650 5 0.844
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP013186 Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence 64026-64057 5 0.844
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP010136 Escherichia coli strain D1 plasmid B, complete genome 13252-13283 5 0.844
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP023062 Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence 31051-31082 5 0.844
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_CP023552 Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence 23151-23182 5 0.844
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 NZ_KY706108 Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence 35182-35213 5 0.844
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 MG700548 Klebsiella pneumoniae strain UR15381 plasmid pUJ-1KPC, complete sequence 49662-49693 7 0.781
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 MG700549 Klebsiella pneumoniae strain st015256/1 plasmid pUJ-83KPC, complete sequence 69397-69428 7 0.781
CP026378_3 3.2|1072082|32|CP026378|CRISPRCasFinder 1072082-1072113 32 NZ_CP026270 Klebsiella oxytoca strain KONIH4 plasmid unnamed, complete sequence 35421-35452 7 0.781
CP026378_3 3.2|1072082|32|CP026378|CRISPRCasFinder 1072082-1072113 32 NZ_CP026760 Klebsiella aerogenes strain AR_0062 plasmid unnamed4 43864-43895 7 0.781
CP026378_3 3.2|1072082|32|CP026378|CRISPRCasFinder 1072082-1072113 32 NZ_CP014747 Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed 39569-39600 7 0.781
CP026378_3 3.5|1072083|31|CP026378|CRT 1072083-1072113 31 NZ_CP049249 Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence 360311-360341 7 0.774
CP026378_2 2.3|963175|32|CP026378|CRISPRCasFinder 963175-963206 32 MG700550 Klebsiella pneumoniae strain st015788/2 plasmid pUJ-84KPC, complete sequence 33982-34013 8 0.75
CP026378_2 2.4|963235|32|CP026378|CRISPRCasFinder 963235-963266 32 NZ_CP022925 Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B 747-778 8 0.75
CP026378_3 3.2|1072082|32|CP026378|CRISPRCasFinder 1072082-1072113 32 NZ_CP049249 Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence 360310-360341 8 0.75
CP026378_2 2.4|963235|32|CP026378|CRISPRCasFinder 963235-963266 32 MN098327 Klebsiella phage Mulock, complete genome 10713-10744 9 0.719

1. spacer 2.1|963175|22|CP026378|PILER-CR matches to NZ_CP044405 (Escherichia coli strain NMBU-W10C18 plasmid pNMBU-W10C18_03, complete sequence) position: , mismatch: 2, identity: 0.909

cgtcacgcctcacacgttccga	CRISPR spacer
ggtcacgcctcacacgttccgc	Protospacer
 ******************** 

2. spacer 2.1|963175|22|CP026378|PILER-CR matches to NZ_CP026728 (Escherichia coli strain 266917_2 plasmid p266917_2_05, complete sequence) position: , mismatch: 2, identity: 0.909

cgtcacgcctcacacgttccga	CRISPR spacer
ggtcacgcctcacacgttccgc	Protospacer
 ******************** 

3. spacer 2.1|963175|22|CP026378|PILER-CR matches to NZ_CP024054 (Escherichia coli strain SMN197SH3 plasmid pO177B3, complete sequence) position: , mismatch: 2, identity: 0.909

cgtcacgcctcacacgttccga	CRISPR spacer
ggtcacgcctcacacgttccgc	Protospacer
 ******************** 

4. spacer 2.1|963175|22|CP026378|PILER-CR matches to NZ_CP024616 (Escherichia coli strain SMN152SH1 plasmid pO177B1, complete sequence) position: , mismatch: 2, identity: 0.909

cgtcacgcctcacacgttccga	CRISPR spacer
ggtcacgcctcacacgttccgc	Protospacer
 ******************** 

5. spacer 2.1|963175|22|CP026378|PILER-CR matches to NZ_LT985239 (Escherichia coli strain 692 genome assembly, plasmid: RCS29_pII) position: , mismatch: 2, identity: 0.909

cgtcacgcctcacacgttccga	CRISPR spacer
ggtcacgcctcacacgttccgc	Protospacer
 ******************** 

6. spacer 2.1|963175|22|CP026378|PILER-CR matches to NZ_LR025104 (Escherichia coli isolate EC-1639 plasmid 5, complete sequence) position: , mismatch: 2, identity: 0.909

cgtcacgcctcacacgttccga	CRISPR spacer
ggtcacgcctcacacgttccgc	Protospacer
 ******************** 

7. spacer 2.1|963175|22|CP026378|PILER-CR matches to NZ_CP023675 (Escherichia coli strain SMN013SH2 plasmid pO177B2, complete sequence) position: , mismatch: 2, identity: 0.909

cgtcacgcctcacacgttccga	CRISPR spacer
ggtcacgcctcacacgttccgc	Protospacer
 ******************** 

8. spacer 2.1|963175|22|CP026378|PILER-CR matches to NZ_CP027592 (Escherichia coli strain 2014C-3011 plasmid unnamed3) position: , mismatch: 2, identity: 0.909

cgtcacgcctcacacgttccga	CRISPR spacer
ggtcacgcctcacacgttccgc	Protospacer
 ******************** 

9. spacer 2.1|963175|22|CP026378|PILER-CR matches to NZ_CP047611 (Escherichia coli strain NMBU_ W06E18 plasmid pNMBU_W06E18_Str1_2, complete sequence) position: , mismatch: 2, identity: 0.909

cgtcacgcctcacacgttccga	CRISPR spacer
ggtcacgcctcacacgttccgc	Protospacer
 ******************** 

10. spacer 2.1|963175|22|CP026378|PILER-CR matches to NZ_CP010194 (Escherichia coli strain M8 plasmid C, complete genome) position: , mismatch: 2, identity: 0.909

cgtcacgcctcacacgttccga	CRISPR spacer
ggtcacgcctcacacgttccgc	Protospacer
 ******************** 

11. spacer 2.1|963175|22|CP026378|PILER-CR matches to MN319465 (Klebsiella pneumoniae strain LDL3-2 plasmid pHNLDL3-2, complete sequence) position: , mismatch: 2, identity: 0.909

cgtcacgcctcacacgttccga	CRISPR spacer
cgtcacgccgcacacgttccgg	Protospacer
********* ***********.

12. spacer 2.1|963175|22|CP026378|PILER-CR matches to NZ_CP023980 (Klebsiella variicola strain X39 plasmid pX39-3, complete sequence) position: , mismatch: 2, identity: 0.909

cgtcacgcctcacacgttccga	CRISPR spacer
cgtcacgccgcacacgttccgg	Protospacer
********* ***********.

13. spacer 2.1|963175|22|CP026378|PILER-CR matches to NZ_MK079571 (Klebsiella pneumoniae strain 6BF16CTX plasmid pHNBF16, complete sequence) position: , mismatch: 2, identity: 0.909

cgtcacgcctcacacgttccga	CRISPR spacer
cgtcacgccgcacacgttccgg	Protospacer
********* ***********.

14. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to MN319465 (Klebsiella pneumoniae strain LDL3-2 plasmid pHNLDL3-2, complete sequence) position: , mismatch: 2, identity: 0.938

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
cgtcacgccgcacacgttccggcacagctacg	Protospacer
********* ***********.**********

15. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP023980 (Klebsiella variicola strain X39 plasmid pX39-3, complete sequence) position: , mismatch: 2, identity: 0.938

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
cgtcacgccgcacacgttccggcacagctacg	Protospacer
********* ***********.**********

16. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_MK079571 (Klebsiella pneumoniae strain 6BF16CTX plasmid pHNBF16, complete sequence) position: , mismatch: 2, identity: 0.938

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
cgtcacgccgcacacgttccggcacagctacg	Protospacer
********* ***********.**********

17. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP045764 (Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid p2CFSAN000318, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcactcctcacacgttccgccacagctacg	Protospacer
 ***** ************** **********

18. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcactcctcacacgttccgccacagctacg	Protospacer
 ***** ************** **********

19. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP044405 (Escherichia coli strain NMBU-W10C18 plasmid pNMBU-W10C18_03, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacgcctcacacgttccgccacagttacg	Protospacer
 ******************** *****.****

20. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP026728 (Escherichia coli strain 266917_2 plasmid p266917_2_05, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacgcctcacacgttccgccacagttacg	Protospacer
 ******************** *****.****

21. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP035754 (Escherichia coli E110019 plasmid pE110019_33, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcactcctcacacgttccgccacagctacg	Protospacer
 ***** ************** **********

22. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP034939 (Pectobacterium odoriferum strain JK2.1 plasmid p.Jk2_1, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtgacgccgcacacgttccgacacagctacg	Protospacer
 ** ***** **********************

23. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP024054 (Escherichia coli strain SMN197SH3 plasmid pO177B3, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacgcctcacacgttccgccacagttacg	Protospacer
 ******************** *****.****

24. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP024616 (Escherichia coli strain SMN152SH1 plasmid pO177B1, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacgcctcacacgttccgccacagttacg	Protospacer
 ******************** *****.****

25. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NC_013718 (Citrobacter rodentium ICC168 plasmid pCROD2, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcactcctcacacgttccgccacagctacg	Protospacer
 ***** ************** **********

26. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP019016 (Escherichia coli strain Ecol_244 plasmid pEC244_4, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcactcctcacacgttccgccacagctacg	Protospacer
 ***** ************** **********

27. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_LT985239 (Escherichia coli strain 692 genome assembly, plasmid: RCS29_pII) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacgcctcacacgttccgccacagttacg	Protospacer
 ******************** *****.****

28. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_LT985318 (Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_p) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcactcctcacacgttccgccacagctacg	Protospacer
 ***** ************** **********

29. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_LR025104 (Escherichia coli isolate EC-1639 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacgcctcacacgttccgccacagttacg	Protospacer
 ******************** *****.****

30. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP023675 (Escherichia coli strain SMN013SH2 plasmid pO177B2, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacgcctcacacgttccgccacagttacg	Protospacer
 ******************** *****.****

31. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP027592 (Escherichia coli strain 2014C-3011 plasmid unnamed3) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacgcctcacacgttccgccacagttacg	Protospacer
 ******************** *****.****

32. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NC_021841 (Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid pSEEH1578_02, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcactcctcacacgttccgccacagctacg	Protospacer
 ***** ************** **********

33. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP047611 (Escherichia coli strain NMBU_ W06E18 plasmid pNMBU_W06E18_Str1_2, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacgcctcacacgttccgccacagttacg	Protospacer
 ******************** *****.****

34. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP010194 (Escherichia coli strain M8 plasmid C, complete genome) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacgcctcacacgttccgccacagttacg	Protospacer
 ******************** *****.****

35. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP029976 (Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcactcctcacacgttccgccacagctacg	Protospacer
 ***** ************** **********

36. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to CP052800 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-2, complete sequence) position: , mismatch: 3, identity: 0.906

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcactcctcacacgttccgccacagctacg	Protospacer
 ***** ************** **********

37. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NC_011752 (Escherichia coli 55989 plasmid 55989p, complete sequence) position: , mismatch: 5, identity: 0.844

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacaccacacacgttccgacacagctata	Protospacer
 *****.** ********************..

38. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to CP042952 (Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence) position: , mismatch: 5, identity: 0.844

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacaccacacacgttccgacacagctata	Protospacer
 *****.** ********************..

39. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to CP051693 (Escherichia coli strain SCU-318 plasmid pSCU-318-1, complete sequence) position: , mismatch: 5, identity: 0.844

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacaccacacacgttccgacacagctata	Protospacer
 *****.** ********************..

40. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NC_019000 (Escherichia coli plasmid pHUSEC41-2, complete sequence) position: , mismatch: 5, identity: 0.844

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacaccacacacgttccgacacagctata	Protospacer
 *****.** ********************..

41. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP009053 (Escherichia coli NCCP15648 plasmid p15648-3, complete sequence) position: , mismatch: 5, identity: 0.844

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacaccacacacgttccgacacagctata	Protospacer
 *****.** ********************..

42. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP013186 (Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence) position: , mismatch: 5, identity: 0.844

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacaccacacacgttccgacacagctata	Protospacer
 *****.** ********************..

43. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP010136 (Escherichia coli strain D1 plasmid B, complete genome) position: , mismatch: 5, identity: 0.844

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacaccacacacgttccgacacagctata	Protospacer
 *****.** ********************..

44. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP023062 (Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence) position: , mismatch: 5, identity: 0.844

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacaccacacacgttccgacacagctata	Protospacer
 *****.** ********************..

45. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_CP023552 (Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence) position: , mismatch: 5, identity: 0.844

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacaccacacacgttccgacacagctata	Protospacer
 *****.** ********************..

46. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to NZ_KY706108 (Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence) position: , mismatch: 5, identity: 0.844

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ggtcacaccacacacgttccgacacagctata	Protospacer
 *****.** ********************..

47. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to MG700548 (Klebsiella pneumoniae strain UR15381 plasmid pUJ-1KPC, complete sequence) position: , mismatch: 7, identity: 0.781

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
cggttacccgcacacgttccgtcacagctacg	Protospacer
** .   ** *********** **********

48. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to MG700549 (Klebsiella pneumoniae strain st015256/1 plasmid pUJ-83KPC, complete sequence) position: , mismatch: 7, identity: 0.781

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
cggttacccgcacacgttccgtcacagctacg	Protospacer
** .   ** *********** **********

49. spacer 3.2|1072082|32|CP026378|CRISPRCasFinder matches to NZ_CP026270 (Klebsiella oxytoca strain KONIH4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

tcattcggcagctgccattggctcaaaccgaa	CRISPR spacer
tcattgggtagctgccattggctggcgctgaa	Protospacer
***** **.************** . .*.***

50. spacer 3.2|1072082|32|CP026378|CRISPRCasFinder matches to NZ_CP026760 (Klebsiella aerogenes strain AR_0062 plasmid unnamed4) position: , mismatch: 7, identity: 0.781

tcattcggcagctgccattggctcaaaccgaa	CRISPR spacer
tcattgggtagctgccattggctggtgctgaa	Protospacer
***** **.************** . .*.***

51. spacer 3.2|1072082|32|CP026378|CRISPRCasFinder matches to NZ_CP014747 (Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed) position: , mismatch: 7, identity: 0.781

tcattcggcagctgccattggctcaaaccgaa	CRISPR spacer
tcattgggtagctgccattggctggtgctgaa	Protospacer
***** **.************** . .*.***

52. spacer 3.5|1072083|31|CP026378|CRT matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.774

cattcggcagctgccattggctcaaaccgaa	CRISPR spacer
ccccgtgcatctgccattggctcaaacagaa	Protospacer
* ..  *** ***************** ***

53. spacer 2.3|963175|32|CP026378|CRISPRCasFinder matches to MG700550 (Klebsiella pneumoniae strain st015788/2 plasmid pUJ-84KPC, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcacgcctcacacgttccgacacagctacg	CRISPR spacer
ccggttaccccacacgttccgtcacagctacg	Protospacer
*    ..**.*********** **********

54. spacer 2.4|963235|32|CP026378|CRISPRCasFinder matches to NZ_CP022925 (Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B) position: , mismatch: 8, identity: 0.75

actggccgacattgccagcatgaacatcaaac	CRISPR spacer
cctggctgacattgccagaatgaacgactggc	Protospacer
 *****.*********** ******. * ..*

55. spacer 3.2|1072082|32|CP026378|CRISPRCasFinder matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tcattcggcagctgccattggctcaaaccgaa	CRISPR spacer
accccgtgcatctgccattggctcaaacagaa	Protospacer
 * ..  *** ***************** ***

56. spacer 2.4|963235|32|CP026378|CRISPRCasFinder matches to MN098327 (Klebsiella phage Mulock, complete genome) position: , mismatch: 9, identity: 0.719

actggccgacattgccagcatgaacatcaaac	CRISPR spacer
cctggccgacgttgcccgcatgaatgactggc	Protospacer
 *********.***** *******.. * ..*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2062022 : 2073485 13 Agrobacterium_phage(12.5%) tRNA NA
DBSCAN-SWA_2 2446339 : 2497005 73 uncultured_Caudovirales_phage(22.45%) integrase,tail,terminase,head,coat attL 2448405:2448426|attR 2495007:2495028
DBSCAN-SWA_3 2513474 : 2609557 94 Erwinia_phage(55.32%) tRNA,integrase,tail,capsid,portal,protease,plate,head attL 2555807:2555823|attR 2576289:2576305
DBSCAN-SWA_4 3309070 : 3381096 85 Salmonella_phage(55.56%) tRNA,integrase,tail,capsid,portal,plate,head attL 3352355:3352402|attR 3381209:3381256
DBSCAN-SWA_5 3749977 : 3784238 38 Erwinia_phage(83.33%) tRNA,integrase,tail,capsid,portal,plate,head attL 3743126:3743141|attR 3790252:3790267
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage